Florence Tama

Affiliations: 
2006-2012 University of Arizona, Tucson, AZ 
 2013- RIKEN 
 2016- Nagoya University, Nagoya-shi, Aichi-ken, Japan 
Area:
Computational Biophysics, Computational Structural Biology
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"Florence Tama"
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Publications

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Asi H, Dasgupta B, Nagai T, et al. (2022) A hybrid approach to study large conformational transitions of biomolecules from single particle XFEL diffraction data. Frontiers in Molecular Biosciences. 9: 913860
Nakata K, Miyazaki N, Yamaguchi H, et al. (2022) High-resolution structure of phosphoketolase from Bifidobacterium longum determined by cryo-EM single-particle analysis. Journal of Structural Biology. 214: 107842
Vuillemot R, Miyashita O, Tama F, et al. (2022) NMMD: Efficient Cryo-EM Flexible Fitting Based on Simultaneous Normal Mode and Molecular Dynamics atomic displacements. Journal of Molecular Biology. 434: 167483
Srivastava A, Tiwari SP, Miyashita O, et al. (2020) Integrative/Hybrid Modeling Approaches for Studying Biomolecules. Journal of Molecular Biology
Tiwari SP, Chhabra S, Tama F, et al. (2020) Computational protocol for assessing the optimal pixel size to improve the accuracy of single particle cryo-electron microscopy maps. Journal of Chemical Information and Modeling
Nakano M, Miyashita O, Tama F. (2019) Parameter optimization for 3D-reconstruction from XFEL diffraction patterns based on Fourier slice matching. Biophysics and Physicobiology. 16: 367-376
Dasgupta B, Miyashita O, Tama F. (2019) Reconstruction of low-resolution molecular structures from simulated atomic force microscopy images. Biochimica Et Biophysica Acta. General Subjects. 129420
Bala S, Shinya S, Srivastava A, et al. (2019) Crystal contact-free conformation of an intrinsically flexible loop in protein crystal: Tim21 as the case study. Biochimica Et Biophysica Acta. General Subjects. 129418
Srivastava A, Bala S, Motomura H, et al. (2019) Conformational ensemble of an intrinsically flexible loop in mitochondrial import protein Tim21 studied by modeling and molecular dynamics simulations. Biochimica Et Biophysica Acta. General Subjects. 129417
Putarjunan A, Ruble J, Srivastava A, et al. (2019) Bipartite anchoring of SCREAM enforces stomatal initiation by coupling MAP kinases to SPEECHLESS. Nature Plants
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