☰

Walter L. Ruzzo

Affiliations: 
Computer Science and Engineering University of Washington, Seattle, Seattle, WA 
Area:
Computer Science, Bioinformatics Biology, Microbiology Biology
Google:
"Walter Ruzzo"
Tree Publications Similar researchers PubMed Report error

Parents

Sign in to add mentor

Children

Sign in to add trainee
Ka Y. Yeung grad student 2001 University of Washington
Agatha H. Liu grad student 2002 University of Washington
Zasha Weinberg grad student 2005 University of Washington
Huei-Hun E. Tseng grad student 2012 University of Washington

Collaborators

Sign in to add collaborator
BETA: Related publications

Publications

You can help our author matching system! If you notice any publications incorrectly attributed to this author, please sign in and mark matches as correct or incorrect.

Seemann SE, Mirza AH, Bang-Berthelsen CH, et al. (2022) Does rapid sequence divergence preclude RNA structure conservation in vertebrates? Nucleic Acids Research
Jones DC, Ruzzo WL. (2021) Polee: RNA-Seq analysis using approximate likelihood. Nar Genomics and Bioinformatics. 3: lqab046
Kirsch R, Seemann SE, Ruzzo WL, et al. (2018) Identification and characterization of novel conserved RNA structures in Drosophila. Bmc Genomics. 19: 899
Hecker N, Seemann SE, Silahtaroglu A, et al. (2017) Associating transcription factors and conserved RNA structures with gene regulation in the human brain. Scientific Reports. 7: 5776
Seemann SE, Mirza AH, Hansen C, et al. (2017) The identification and functional annotation of RNA structures conserved in vertebrates. Genome Research
Peng X, Pipes L, Xiong H, et al. (2014) Assessment and improvement of Indian-origin rhesus macaque and Mauritian-origin cynomolgus macaque genome annotations using deep transcriptome sequencing data. Journal of Medical Primatology. 43: 317-28
Ruzzo WL, Gorodkin J. (2014) De novo discovery of structured ncRNA motifs in genomic sequences. Methods in Molecular Biology (Clifton, N.J.). 1097: 303-18
Gorodkin J, Hofacker IL, Ruzzo WL. (2014) Concepts and introduction to RNA bioinformatics. Methods in Molecular Biology (Clifton, N.J.). 1097: 1-31
Yao Z, Macquarrie KL, Fong AP, et al. (2014) Discriminative motif analysis of high-throughput dataset. Bioinformatics (Oxford, England). 30: 775-83
Bolouri H, Ruzzo WL. (2012) Integration of 198 ChIP-seq datasets reveals human cis-regulatory regions. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 19: 989-97
See more...