Giri Narasimhan
Affiliations: | Florida International University, Miami, FL, United States |
Area:
Computer Science, Microbiology Biology, Virology Biology, Bioinformatics BiologyGoogle:
"Giri Narasimhan"Children
Sign in to add traineeChengyong Yang | grad student | 2006 | Florida International |
Gaolin Zheng | grad student | 2006 | Florida International |
Patricia Buendia | grad student | 2007 | Florida International |
Erliang Zeng | grad student | 2008 | Florida International |
Nestor A. Parra | grad student | 2009 | Florida International |
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Publications
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Ruiz-Perez D, Gimon I, Sazal M, et al. (2023) Unfolding and De-confounding: Biologically meaningful causal inference from longitudinal multi-omic networks using METALICA. Biorxiv : the Preprint Server For Biology |
Ruiz-Perez D, Lugo-Martinez J, Bourguignon N, et al. (2021) Dynamic Bayesian Networks for Integrating Multi-omics Time Series Microbiome Data. Msystems. 6 |
Valdes C, Stebliankin V, Narasimhan G. (2019) Large scale microbiome profiling in the cloud. Bioinformatics (Oxford, England). 35: i13-i22 |
Cickovski T, Aguiar-Pulido V, Narasimhan G. (2019) MATria: a unified centrality algorithm. Bmc Bioinformatics. 20: 278 |
Lugo-Martinez J, Ruiz-Perez D, Narasimhan G, et al. (2019) Dynamic interaction network inference from longitudinal microbiome data. Microbiome. 7: 54 |
Cickovski T, Narasimhan G. (2018) Constructing Lightweight And Flexible Pipelines Using Plugin-Based Microbiome Analysis (PluMA). Bioinformatics (Oxford, England) |
Cickovski T, Peake E, Aguiar-Pulido V, et al. (2017) ATria: a novel centrality algorithm applied to biological networks. Bmc Bioinformatics. 18: 239 |
Aguiar-Pulido V, Huang W, Suarez-Ulloa V, et al. (2016) Metagenomics, Metatranscriptomics, and Metabolomics Approaches for Microbiome Analysis. Evolutionary Bioinformatics Online. 12: 5-16 |
Huang W, Kazmierczak K, Zhou Z, et al. (2016) Gene Expression Patterns in Transgenic Mouse Models of Hypertrophic Cardiomyopathy Caused by Mutations in Myosin Regulatory Light Chain. Archives of Biochemistry and Biophysics |
Cickovski T, Flor T, Irving-Sachs G, et al. (2015) GPUDePiCt: A Parallel Implementation of a Clustering Algorithm for Computing Degenerate Primers on Graphics Processing Units. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 12: 445-54 |