F Marty Ytreberg
Affiliations: | Physics | University of Idaho, Moscow, ID, United States |
Area:
Molecular Physics, General BiophysicsWebsite:
https://www.uidaho.edu/sci/physics/people/faculty/ytrebergGoogle:
"Frederick Martin Ytreberg" OR "F. Marty Ytreberg"Mean distance: (not calculated yet)
Parents
Sign in to add mentor| Susan Richards McKay | grad student | 2000 | University of Maine | |
| (Pattern formation in reaction -diffusion and ferrofluid systems.) | ||||
Children
Sign in to add trainee| Kuo H. Lee | grad student | 2012 | University of Idaho |
| Yingqian Ada Zhan | grad student | 2013 | University of Idaho |
| Dharmeshkumar Patel | post-doc | 2018-2020 | University of Idaho (Chemistry Tree) |
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Publications
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| Patel D, Haag SL, Patel JS, et al. (2022) Paired Simulations and Experimental Investigations into the Calcium-Dependent Conformation of Albumin. Journal of Chemical Information and Modeling. 62: 1282-1293 |
| Patel D, Patel JS, Ytreberg FM. (2021) Implementing and Assessing an Alchemical Method for Calculating Protein-Protein Binding Free Energy. Journal of Chemical Theory and Computation |
| Yang J, Naik N, Patel JS, et al. (2020) Predicting the viability of beta-lactamase: How folding and binding free energies correlate with beta-lactamase fitness. Plos One. 15: e0233509 |
| Mirabzadeh CA, Ytreberg FM. (2020) Implementation of adaptive integration method for free energy calculations in molecular systems Peerj Computer Science. 6: e264 |
| Patel DJ, Suresh Patel J, Ytreberg FM. (2020) Testing and Improving Alchemical Methods for Protein-Protein Binding Affinity Calculation Biophysical Journal. 118: 142a |
| Barnes J, Martin K, Miller C, et al. (2020) Searching for a Mechanistic Description of Pairwise Epistasis in Protein Systems Biophysical Journal. 118: 50a |
| Martin KP, MacKenzie SM, Barnes JW, et al. (2019) Protein Stability in Titan's Subsurface Water Ocean. Astrobiology |
| Martin KP, Ytreberg FM. (2019) Comparing Binding Affinity Results from Pyrosetta and Coarse-Grained Simulations Biophysical Journal. 116: 145a |
| Barnes J, Ytreberg FM. (2019) Assessing Foldx for Predicting Protein-Protein Binding Affinity Changes Due to Multiple Mutations Biophysical Journal. 116: 336a |
| Suresh Patel J, Ytreberg FM. (2019) Calculation of Protein-Protein Binding Free Energies using Umbrella Sampling with Dual Resolution Water Models Biophysical Journal. 116: 291a |