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Pascal Auffinger

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Strasbourg 1 
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"Pascal Auffinger"
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Georges Wipff grad student 1991 Strasbourg 1
 (Simulations de la dynamique moleculaire de cryptands et cruptates cationiques : de la phase gazeuse a la phase liquide)

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Hashem Y, Auffinger P. (2009) A short guide for molecular dynamics simulations of RNA systems. Methods (San Diego, Calif.). 47: 187-97
Auffinger P, Cheatham TE, Vaiana AC. (2007) Spontaneous Formation of KCl Aggregates in Biomolecular Simulations: A Force Field Issue? Journal of Chemical Theory and Computation. 3: 1851-9
Auffinger P, Hashem Y. (2007) Nucleic acid solvation: from outside to insight. Current Opinion in Structural Biology. 17: 325-33
Vaiana AC, Westhof E, Auffinger P. (2006) A molecular dynamics simulation study of an aminoglycoside/A-site RNA complex: conformational and hydration patterns. Biochimie. 88: 1061-73
Auffinger P, Bielecki L, Westhof E. (2003) The Mg2+ binding sites of the 5S rRNA loop E motif as investigated by molecular dynamics simulations. Chemistry & Biology. 10: 551-61
Auffinger P, Westhof E. (2002) Melting of the solvent structure around a RNA duplex: a molecular dynamics simulation study. Biophysical Chemistry. 95: 203-10
Auffinger P, Westhof E. (2000) Water and ion binding around RNA and DNA (C,G) oligomers. Journal of Molecular Biology. 300: 1113-31
Auffinger P, Westhof E. (1999) Hydration of RNA base pairs. Journal of Biomolecular Structure & Dynamics. 16: 693-707
Auffinger P, Louise-May S, Westhof E. (1999) Molecular dynamics simulations of solvated yeast tRNA(Asp). Biophysical Journal. 76: 50-64
Hermann T, Auffinger P, Westhof E. (1998) Molecular dynamics investigations of hammerhead ribozyme RNA European Biophysics Journal. 27: 153-165
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