☰

Chenghua Shao, Ph.D. - Publications

Affiliations: 
2007 Boston University, Boston, MA, United States 
Area:
General Biophysics
Tree Info Similar researchers PubMed Report error

22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Parks CD, Gaieb Z, Chiu M, Yang H, Shao C, Walters WP, Jansen JM, McGaughey G, Lewis RA, Bembenek SD, Ameriks MK, Mirzadegan T, Burley SK, Amaro RE, Gilson MK. D3R grand challenge 4: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies. Journal of Computer-Aided Molecular Design. PMID 31974851 DOI: 10.1007/S10822-020-00289-Y  0.372
2019 Goodsell DS, Zardecki C, Di Costanzo L, Duarte JM, Hudson BP, Persikova I, Segura J, Shao C, Voigt M, Westbrook JD, Young JY, Burley SK. RCSB Protein Data Bank: Enabling biomedical research and drug discovery. Protein Science : a Publication of the Protein Society. PMID 31531901 DOI: 10.1002/Pro.3730  0.351
2019 Wagner JR, Churas CP, Liu S, Swift RV, Chiu M, Shao C, Feher VA, Burley SK, Gilson MK, Amaro RE. Continuous Evaluation of Ligand Protein Predictions: A Weekly Community Challenge for Drug Docking. Structure (London, England : 1993). PMID 31257108 DOI: 10.1016/J.Str.2019.05.012  0.334
2019 Gaieb Z, Parks CD, Chiu M, Yang H, Shao C, Walters WP, Lambert MH, Nevins N, Bembenek SD, Ameriks MK, Mirzadegan T, Burley SK, Amaro RE, Gilson MK. D3R Grand Challenge 3: blind prediction of protein-ligand poses and affinity rankings. Journal of Computer-Aided Molecular Design. PMID 30632055 DOI: 10.1007/S10822-018-0180-4  0.361
2019 Young JY, Shao C, Feng Z, Westbrook J, Peisach E, Persikova I, Burley SK. Enabling findability, accessibility, interoperability, and reusability with improved data representation of carbohydrates in the Protein Data Bank F1000research. 8. DOI: 10.7490/F1000Research.1116506.1  0.318
2018 Burley SK, Berman HM, Bhikadiya C, Bi C, Chen L, Di Costanzo L, Christie C, Dalenberg K, Duarte JM, Dutta S, Feng Z, Ghosh S, Goodsell DS, Green RK, Guranovic V, ... ... Shao C, et al. RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy. Nucleic Acids Research. PMID 30357411 DOI: 10.1093/Nar/Gky1004  0.334
2018 Markosian C, Di Costanzo L, Sekharan M, Shao C, Burley SK, Zardecki C. Analysis of impact metrics for the Protein Data Bank. Scientific Data. 5: 180212. PMID 30325351 DOI: 10.1038/Sdata.2018.212  0.336
2018 Young JY, Westbrook JD, Feng Z, Peisach E, Persikova I, Sala R, Sen S, Berrisford JM, Swaminathan GJ, Oldfield TJ, Gutmanas A, Igarashi R, Armstrong DR, Baskaran K, Chen L, ... ... Shao C, et al. Worldwide Protein Data Bank biocuration supporting open access to high-quality 3D structural biology data. Database : the Journal of Biological Databases and Curation. 2018. PMID 29688351 DOI: 10.1093/Database/Bay002  0.339
2018 Zardecki C, Shao C, Westbrook J, Feng Z, Young J. RCSB Protein Data Bank: enabling breakthroughs in biomedical research and structure-guided drug discovery Acta Crystallographica Section A. 74. DOI: 10.1107/S0108767318098793  0.319
2017 Gaieb Z, Liu S, Gathiaka S, Chiu M, Yang H, Shao C, Feher VA, Walters WP, Kuhn B, Rudolph MG, Burley SK, Gilson MK, Amaro RE. D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies. Journal of Computer-Aided Molecular Design. PMID 29204945 DOI: 10.1007/S10822-017-0088-4  0.358
2017 Gore S, Sanz García E, Hendrickx PMS, Gutmanas A, Westbrook JD, Yang H, Feng Z, Baskaran K, Berrisford JM, Hudson BP, Ikegawa Y, Kobayashi N, Lawson CL, Mading S, Mak L, ... ... Shao C, et al. Validation of Structures in the Protein Data Bank. Structure (London, England : 1993). 25: 1916-1927. PMID 29174494 DOI: 10.1016/J.Str.2017.10.009  0.34
2017 Shao C, Yang H, Westbrook JD, Young JY, Zardecki C, Burley SK. Multivariate Analyses of Quality Metrics for Crystal Structures in the PDB Archive. Structure (London, England : 1993). PMID 28216043 DOI: 10.1107/S0108767317098142  0.302
2016 Rose PW, Prlić A, Altunkaya A, Bi C, Bradley AR, Christie CH, Costanzo LD, Duarte JM, Dutta S, Feng Z, Green RK, Goodsell DS, Hudson B, Kalro T, Lowe R, ... ... Shao C, et al. The RCSB protein data bank: integrative view of protein, gene and 3D structural information. Nucleic Acids Research. PMID 27794042 DOI: 10.1093/Nar/Gkw1000  0.353
2016 Adams PD, Aertgeerts K, Bauer C, Bell JA, Berman HM, Bhat TN, Blaney JM, Bolton E, Bricogne G, Brown D, Burley SK, Case DA, Clark KL, Darden T, Emsley P, ... ... Shao C, et al. Outcome of the First wwPDB/CCDC/D3R Ligand Validation Workshop. Structure (London, England : 1993). 24: 502-8. PMID 27050687 DOI: 10.1016/J.Str.2016.02.017  0.337
2014 Sen S, Young J, Berrisford JM, Chen M, Conroy MJ, Dutta S, Di Costanzo L, Gao G, Ghosh S, Hudson BP, Igarashi R, Kengaku Y, Liang Y, Peisach E, Persikova I, ... ... Shao C, et al. Small molecule annotation for the Protein Data Bank. Database : the Journal of Biological Databases and Curation. 2014: bau116. PMID 25425036 DOI: 10.1093/Database/Bau116  0.351
2013 Young JY, Feng Z, Dimitropoulos D, Sala R, Westbrook J, Zhuravleva M, Shao C, Quesada M, Peisach E, Berman HM. Chemical annotation of small and peptide-like molecules at the Protein Data Bank. Database : the Journal of Biological Databases and Curation. 2013: bat079. PMID 24291661 DOI: 10.1093/Database/Bat079  0.317
2013 Berman HM, Coimbatore Narayanan B, Costanzo LD, Dutta S, Ghosh S, Hudson BP, Lawson CL, Peisach E, Prli? A, Rose PW, Shao C, Yang H, Young J, Zardecki C. Trendspotting in the Protein Data Bank Febs Letters. 587: 1036-1045. PMID 23337870 DOI: 10.1016/J.Febslet.2012.12.029  0.367
2009 Shi X, Shao C, Zhang X, Zambonelli C, Redfield AG, Head JF, Seaton BA, Roberts MF. Modulation of Bacillus thuringiensis phosphatidylinositol-specific phospholipase C activity by mutations in the putative dimerization interface. The Journal of Biological Chemistry. 284: 15607-18. PMID 19369255 DOI: 10.1074/Jbc.M901601200  0.626
2008 Shao C, Novakovic VA, Head JF, Seaton BA, Gilbert GE. Crystal structure of lactadherin C2 domain at 1.7A resolution with mutational and computational analyses of its membrane-binding motif. The Journal of Biological Chemistry. 283: 7230-41. PMID 18160406 DOI: 10.1074/Jbc.M705195200  0.629
2007 Shao C, Shi X, Wehbi H, Zambonelli C, Head JF, Seaton BA, Roberts MF. Dimer structure of an interfacially impaired phosphatidylinositol-specific phospholipase C. The Journal of Biological Chemistry. 282: 9228-35. PMID 17213187 DOI: 10.1074/Jbc.M610918200  0.631
2006 Shao C, Zhang F, Kemp MM, Linhardt RJ, Waisman DM, Head JF, Seaton BA. Crystallographic analysis of calcium-dependent heparin binding to annexin A2. The Journal of Biological Chemistry. 281: 31689-95. PMID 16882661 DOI: 10.1074/Jbc.M604502200  0.597
2006 Shao C, Head JF, Seaton BA, Gilbert GE. Crystal Structure of the C2 Domain of Lactadherin and Computational Docking of Phosphatidyl-L-Serine. Blood. 108: 195-195. DOI: 10.1182/Blood.V108.11.195.195  0.633
Show low-probability matches.