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Elias M. Puchner - Publications

Affiliations: 
University of Minnesota, Twin Cities, Minneapolis, MN 
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45 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Banerjee C, Puchner EM, Kim DH. ULK1 seen at the single-molecule level during autophagy initiation. Autophagy. PMID 37992308 DOI: 10.1080/15548627.2023.2286078  0.641
2023 Banerjee C, Mehra D, Song D, Mancebo A, Park JM, Kim DH, Puchner EM. ULK1 forms distinct oligomeric states and nanoscopic structures during autophagy initiation. Science Advances. 9: eadh4094. PMID 37774021 DOI: 10.1126/sciadv.adh4094  0.625
2022 Mehra D, Adhikari S, Banerjee C, Puchner EM. Characterizing locus specific chromatin structure and dynamics with correlative conventional and super-resolution imaging in living cells. Nucleic Acids Research. PMID 35524554 DOI: 10.1093/nar/gkac314  0.641
2021 Mancebo A, Mehra D, Banerjee C, Kim DH, Puchner EM. Efficient Cross-Correlation Filtering of One- and Two-Color Single Molecule Localization Microscopy Data. Frontiers in Bioinformatics. 1: 739769. PMID 36303727 DOI: 10.3389/fbinf.2021.739769  0.621
2020 Adhikari S, Banerjee C, Moscatelli J, Puchner EM. Conventional BODIPY Conjugates for Live-Cell Super-Resolution Microscopy and Single-Molecule Tracking. Journal of Visualized Experiments : Jove. PMID 32568221 DOI: 10.3791/60950  0.69
2020 Mancebo A, DeMars L, Ertsgaard CT, Puchner EM. Precisely calibrated and spatially informed illumination for conventional fluorescence and improved PALM imaging applications. Methods and Applications in Fluorescence. 8: 025004. PMID 31995796 DOI: 10.1088/2050-6120/Ab716A  0.436
2020 Adhikari S, Moscatelli J, Puchner EM. Novel Mechanism of Conventional BODIPY Conjugates for Live-cell SMLM Reveals Lipid Droplet Biology at Super-resolution Microscopy and Microanalysis. 26: 1040-1042. DOI: 10.1017/S1431927620016761  0.356
2020 Mehra D, Banerjee C, Adhikari S, Clark KJ, Ekker SC, Puchner EM. Characterization of dCas9 Interaction Kinetics and Local Chromatin Structure in Live Human Cells using Palm Superresolution Microscopy Biophysical Journal. 118: 146a. DOI: 10.1016/J.Bpj.2019.11.919  0.623
2020 Mancebo A, Puchner EM. Mitigating Phototoxicity in Single-Molecule Localization Microscopy Using Precisely Calibrated and Spatially Informed Photoactivation Biophysical Journal. 118: 312a-313a. DOI: 10.1016/J.Bpj.2019.11.1762  0.379
2019 Adhikari S, Moscatelli J, Smith EM, Banerjee C, Puchner EM. Single-molecule localization microscopy and tracking with red-shifted states of conventional BODIPY conjugates in living cells. Nature Communications. 10: 3400. PMID 31363088 DOI: 10.1038/S41467-019-11384-6  0.693
2019 Smith EM, Gautier A, Puchner EM. Single-molecule localization microscopy with the Fluorescence-Activating and absorption-Shifting Tag (FAST) system. Acs Chemical Biology. PMID 31083964 DOI: 10.1021/Acschembio.9B00149  0.482
2019 Puchner EM, Adhikari S. Quantitative and Motion-Corrected Super-Resolution Imaging of Endosome Dynamics in Living Cells Biophysical Journal. 116: 137a. DOI: 10.1016/J.Bpj.2018.11.761  0.302
2019 Adhikari S, Moscatelli J, Puchner E. Live Cell Super-Resolution Imaging with Red-Shifted States of Conventional Bodipy Fluorophores Biophysical Journal. 116: 439a-440a. DOI: 10.1016/J.Bpj.2018.11.2366  0.326
2017 Ramírez MP, Rivera M, Quiroga-Roger D, Bustamante A, Vega M, Baez M, Puchner EM, Wilson CA. Single molecule force spectroscopy reveals the effect of BiP chaperone on protein folding. Protein Science : a Publication of the Protein Society. PMID 28176394 DOI: 10.1002/Pro.3137  0.361
2017 Smith EM, Stefansson R, Ramirez Lopez MP, Puchner EM. Characterization of Ire1 Interactions and Dynamics with Quantitative Super-Resolution Microscopy Biophysical Journal. 112: 148a. DOI: 10.1016/J.Bpj.2016.11.813  0.321
2015 Sydor AM, Czymmek KJ, Puchner EM, Mennella V. Super-Resolution Microscopy: From Single Molecules to Supramolecular Assemblies. Trends in Cell Biology. 25: 730-48. PMID 26546293 DOI: 10.1016/J.Tcb.2015.10.004  0.387
2015 Wu CY, Roybal KT, Puchner EM, Onuffer J, Lim WA. Remote control of therapeutic T cells through a small molecule-gated chimeric receptor. Science (New York, N.Y.). PMID 26405231 DOI: 10.1126/Science.Aab4077  0.698
2014 Puchner EM, Huang B, Gaub HE. Single molecule techniques--applications in biology. Febs Letters. 588: 3519. PMID 25157433 DOI: 10.1016/J.Febslet.2014.08.020  0.565
2013 Puchner EM, Walter JM, Kasper R, Huang B, Lim WA. Counting molecules in single organelles with superresolution microscopy allows tracking of the endosome maturation trajectory. Proceedings of the National Academy of Sciences of the United States of America. 110: 16015-20. PMID 24043832 DOI: 10.1073/Pnas.1309676110  0.608
2013 Heucke SF, Puchner EM, Stahl SW, Holleitner AW, Gaub HE, Tinnefeld P. Nanoapertures for AFM-based single-molecule force spectroscopy International Journal of Nanotechnology. 10: 607-619. DOI: 10.1504/Ijnt.2013.053529  0.606
2013 Puchner EM, Walter JM, Kasper R, Huang B, Lim WA. Probing Molecular Number Variability in Intracellular Structures using Photoswitchable Fluorescent Proteins Biophysical Journal. 104: 201a. DOI: 10.1016/J.Bpj.2012.11.1133  0.644
2012 Puchner EM, Gaub HE. Single-molecule mechanoenzymatics. Annual Review of Biophysics. 41: 497-518. PMID 22577826 DOI: 10.1146/Annurev-Biophys-050511-102301  0.613
2012 Strackharn M, Stahl SW, Puchner EM, Gaub HE. Functional assembly of aptamer binding sites by single-molecule cut-and-paste. Nano Letters. 12: 2425-8. PMID 22468898 DOI: 10.1021/Nl300422Y  0.577
2011 Stahl SW, Puchner EM, Alexandrovich A, Gautel M, Gaub HE. A conditional gating mechanism assures the integrity of the molecular force-sensor titin kinase. Biophysical Journal. 101: 1978-86. PMID 22004752 DOI: 10.1016/J.Bpj.2011.09.027  0.595
2011 Heus HA, Puchner EM, van Vugt-Jonker AJ, Zimmermann JL, Gaub HE. Atomic force microscope-based single-molecule force spectroscopy of RNA unfolding. Analytical Biochemistry. 414: 1-6. PMID 21402049 DOI: 10.1016/J.Ab.2011.03.012  0.596
2010 Geisler M, Xiao S, Puchner EM, Gräter F, Hugel T. Controlling the structure of proteins at surfaces. Journal of the American Chemical Society. 132: 17277-81. PMID 21080669 DOI: 10.1021/Ja107212Z  0.608
2010 Puchner EM, Gaub HE. Exploring the conformation-regulated function of titin kinase by mechanical pump and probe experiments with single molecules. Angewandte Chemie (International Ed. in English). 49: 1147-50. PMID 20077447 DOI: 10.1002/Anie.200905956  0.59
2010 Cordes T, Strackharn M, Stahl SW, Summerer W, Steinhauer C, Forthmann C, Puchner EM, Vogelsang J, Gaub HE, Tinnefeld P. Resolving single-molecule assembled patterns with superresolution blink-microscopy. Nano Letters. 10: 645-51. PMID 20017533 DOI: 10.1021/Nl903730R  0.626
2010 Puchner EM, Gaub HE. Exploring the Function of Titin Kinase by Mechanical Single-Molecule Pump-And-Probe Biophysical Journal. 98. DOI: 10.1016/J.Bpj.2009.12.4124  0.628
2010 Puchner EM, Gaub HE. Inside Cover: Exploring the Conformation-Regulated Function of Titin Kinase by Mechanical Pump and Probe Experiments with Single Molecules (Angew. Chem. Int. Ed. 6/2010) Angewandte Chemie. 49: 990-990. DOI: 10.1002/Anie.200907116  0.591
2010 Puchner EM, Gaub HE. Innentitelbild: Untersuchung der konformationsregulierten Funktion der Titinkinase durch mechanische “pump-and-probe”-Experimente mit einzelnen Molekülen (Angew. Chem. 6/2010) Angewandte Chemie. 122: 1004-1004. DOI: 10.1002/Ange.200907116  0.495
2010 Puchner EM, Gaub HE. Untersuchung der konformationsregulierten Funktion der Titinkinase durch mechanische “pump‐and‐probe”‐Experimente mit einzelnen Molekülen Angewandte Chemie. 122: 1165-1168. DOI: 10.1002/Ange.200905956  0.481
2009 Puchner EM, Gaub HE. Force and function: probing proteins with AFM-based force spectroscopy. Current Opinion in Structural Biology. 19: 605-14. PMID 19822417 DOI: 10.1016/J.Sbi.2009.09.005  0.628
2009 Gumpp H, Puchner EM, Zimmermann JL, Gerland U, Gaub HE, Blank K. Triggering enzymatic activity with force. Nano Letters. 9: 3290-5. PMID 19658405 DOI: 10.1021/Nl9015705  0.602
2009 Stahl SW, Puchner EM, Gaub HE. Photothermal cantilever actuation for fast single-molecule force spectroscopy. The Review of Scientific Instruments. 80: 073702. PMID 19655951 DOI: 10.1063/1.3157466  0.611
2009 Gumpp H, Stahl SW, Strackharn M, Puchner EM, Gaub HE. Ultrastable combined atomic force and total internal reflection fluorescence microscope [corrected]. The Review of Scientific Instruments. 80: 063704. PMID 19566207 DOI: 10.1063/1.3148224  0.623
2009 Kufer SK, Strackharn M, Stahl SW, Gumpp H, Puchner EM, Gaub HE. Optically monitoring the mechanical assembly of single molecules. Nature Nanotechnology. 4: 45-9. PMID 19119282 DOI: 10.1038/Nnano.2008.333  0.626
2009 Gumpp H, Stahl SW, Strackharn M, Puchner EM, Gaub HE. Erratum: ``Ultrastable combined atomic force and total internal fluorescence microscope'' [Rev. Sci Instrum. 80, 063704 (2009)] Review of Scientific Instruments. 80: 109901. DOI: 10.1063/1.3249564  0.574
2009 Puchner EM, Alexandrovich A, Kho AL, Hensen U, Schäfer LV, Brandmeier B, Gräter F, Grubmüller H, Gautel M, Gaub HE. Single-Molecule Force Spectroscopy Reveals the Function of Titin Kinase as Force Sensor Biophysical Journal. 96. DOI: 10.1016/J.Bpj.2008.12.3401  0.626
2008 Puchner EM, Kufer SK, Strackharn M, Stahl SW, Gaub HE. Nanoparticle self-assembly on a DNA-scaffold written by single-molecule cut-and-paste. Nano Letters. 8: 3692-5. PMID 18826290 DOI: 10.1021/Nl8018627  0.534
2008 Puchner EM, Alexandrovich A, Kho AL, Hensen U, Schäfer LV, Brandmeier B, Gräter F, Grubmüller H, Gaub HE, Gautel M. Mechanoenzymatics of titin kinase. Proceedings of the National Academy of Sciences of the United States of America. 105: 13385-90. PMID 18765796 DOI: 10.1073/Pnas.0805034105  0.562
2008 Morfill J, Neumann J, Blank K, Steinbach U, Puchner EM, Gottschalk KE, Gaub HE. Force-based analysis of multidimensional energy landscapes: application of dynamic force spectroscopy and steered molecular dynamics simulations to an antibody fragment-peptide complex. Journal of Molecular Biology. 381: 1253-66. PMID 18619976 DOI: 10.1016/J.Jmb.2008.06.065  0.563
2008 Puchner EM, Franzen G, Gautel M, Gaub HE. Comparing proteins by their unfolding pattern. Biophysical Journal. 95: 426-34. PMID 18550806 DOI: 10.1529/Biophysj.108.129999  0.595
2008 Kufer SK, Puchner EM, Gumpp H, Liedl T, Gaub HE. Single-molecule cut-and-paste surface assembly. Science (New York, N.Y.). 319: 594-6. PMID 18239119 DOI: 10.1126/Science.1151424  0.611
2008 Puchner EM, Alexandrovich A, Ay LK, Hensen U, Schäfer LV, Brandmeier B, Gräter F, Grubmüller H, Gaub HE, Gautel M. Mechanoenzymatics of titin kinase (Proceeding of the National Academy of Sciences of the United States of America (2008) 36, 105, (13285-13390) DOI:10.1073/pnas.0805024105) Proceedings of the National Academy of Sciences of the United States of America. 105: 21045. DOI: 10.1073/Pnas.0810209105  0.465
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