| Year |
Citation |
Score |
| 2023 |
Munasinghe M, Read A, Stitzer MC, Song B, Menard CC, Ma KY, Brandvain Y, Hirsch CN, Springer N. Combined analysis of transposable elements and structural variation in maize genomes reveals genome contraction outpaces expansion. Plos Genetics. 19: e1011086. PMID 38134220 DOI: 10.1371/journal.pgen.1011086 |
0.326 |
|
| 2023 |
Ellison EL, Zhou P, Hermanson P, Chu YH, Read A, Hirsch CN, Grotewold E, Springer NM. Mutator transposon insertions within maize genes often provide a novel outward reading promoter. Genetics. 225. PMID 37815810 DOI: 10.1093/genetics/iyad171 |
0.329 |
|
| 2023 |
Chen G, Wang R, Jiang Y, Dong X, Xu J, Xu Q, Kan Q, Luo Z, Springer NM, Li Q. A novel active transposon creates allelic variation through altered translation rate to influence protein abundance. Nucleic Acids Research. PMID 36629271 DOI: 10.1093/nar/gkac1195 |
0.308 |
|
| 2022 |
Marand AP, Eveland AL, Kaufmann K, Springer NM. -Regulatory Elements in Plant Development, Adaptation, and Evolution. Annual Review of Plant Biology. PMID 36608347 DOI: 10.1146/annurev-arplant-070122-030236 |
0.338 |
|
| 2022 |
Liang Z, Myers ZA, Petrella D, Engelhorn J, Hartwig T, Springer NM. Mapping responsive genomic elements to heat stress in a maize diversity panel. Genome Biology. 23: 234. PMID 36345007 DOI: 10.1186/s13059-022-02807-7 |
0.301 |
|
| 2022 |
Gent JI, Higgins KM, Swentowsky KW, Fu FF, Zeng Y, Kim DW, Dawe RK, Springer NM, Anderson SN. The maize gene maternal derepression of r1 encodes a DNA glycosylase that demethylates DNA and reduces siRNA expression in the endosperm. The Plant Cell. PMID 35775949 DOI: 10.1093/plcell/koac199 |
0.413 |
|
| 2022 |
Weiss T, Crisp PA, Rai KM, Song M, Springer NM, Zhang F. Epigenetic features drastically impact CRISPR-Cas9 efficacy in plants. Plant Physiology. PMID 35689624 DOI: 10.1093/plphys/kiac285 |
0.335 |
|
| 2022 |
Read A, Weiss T, Crisp PA, Liang Z, Noshay J, Menard CC, Wang C, Song M, Hirsch CN, Springer NM, Zhang F. Genome-wide loss of CHH methylation with limited transcriptome changes in Setaria viridis domains rearranged methyltransferase (DRM) mutants. The Plant Journal : For Cell and Molecular Biology. PMID 35436373 DOI: 10.1111/tpj.15781 |
0.451 |
|
| 2022 |
Xu Q, Wu L, Luo Z, Zhang M, Lai J, Li L, Springer NM, Li Q. DNA demethylation affects imprinted gene expression in maize endosperm. Genome Biology. 23: 77. PMID 35264226 DOI: 10.1186/s13059-022-02641-x |
0.306 |
|
| 2021 |
Noshay JM, Liang Z, Zhou P, Crisp PA, Marand AP, Hirsch CN, Schmitz RJ, Springer NM. Stability of DNA methylation and chromatin accessibility in structurally diverse maize genomes. G3 (Bethesda, Md.). 11. PMID 34849810 DOI: 10.1093/g3journal/jkab190 |
0.426 |
|
| 2021 |
Zhou P, Enders TA, Myers ZA, Magnusson E, Crisp PA, Noshay J, Gomez-Cano F, Liang Z, Grotewold E, Greenham K, Springer N. Prediction of conserved and variable heat and cold stress response in maize using cis-regulatory information. The Plant Cell. PMID 34735005 DOI: 10.1093/plcell/koab267 |
0.773 |
|
| 2021 |
Stitzer MC, Anderson SN, Springer NM, Ross-Ibarra J. The genomic ecosystem of transposable elements in maize. Plos Genetics. 17: e1009768. PMID 34648488 DOI: 10.1371/journal.pgen.1009768 |
0.339 |
|
| 2021 |
Qiu Y, O'Connor CH, Della Coletta R, Renk JS, Monnahan PJ, Noshay JM, Liang Z, Gilbert A, Anderson SN, McGaugh SE, Springer NM, Hirsch CN. Whole-genome variation of transposable element insertions in a maize diversity panel. G3 (Bethesda, Md.). 11. PMID 34568911 DOI: 10.1093/g3journal/jkab238 |
0.363 |
|
| 2021 |
Anderson SN, Zhou P, Higgins K, Brandvain Y, Springer NM. Widespread imprinting of transposable elements and variable genes in the maize endosperm. Plos Genetics. 17: e1009491. PMID 33830994 DOI: 10.1371/journal.pgen.1009491 |
0.426 |
|
| 2021 |
Long J, Liu J, Xia A, Springer NM, He Y. Maize Decrease in DNA methylation 1 targets RNA-directed DNA methylation on active chromatin. The Plant Cell. PMID 33779761 DOI: 10.1093/plcell/koab098 |
0.402 |
|
| 2021 |
Noshay JM, Marand AP, Anderson SN, Zhou P, Mejia Guerra MK, Lu Z, O'Connor CH, Crisp PA, Hirsch CN, Schmitz RJ, Springer NM. Assessing the regulatory potential of transposable elements using chromatin accessibility profiles of maize transposons. Genetics. 217: 1-13. PMID 33683350 DOI: 10.1093/genetics/iyaa003 |
0.448 |
|
| 2021 |
Liang Z, Anderson SN, Noshay JM, Crisp PA, Enders TA, Springer NM. Genetic and epigenetic variation in transposable element expression responses to abiotic stress in maize. Plant Physiology. PMID 33591319 DOI: 10.1093/plphys/kiab073 |
0.797 |
|
| 2021 |
Noshay JM, Springer NM. Stories that can't be told by SNPs; DNA methylation variation in plant populations. Current Opinion in Plant Biology. 61: 101989. PMID 33445144 DOI: 10.1016/j.pbi.2020.101989 |
0.323 |
|
| 2020 |
Xu G, Lyu J, Li Q, Liu H, Wang D, Zhang M, Springer NM, Ross-Ibarra J, Yang J. Evolutionary and functional genomics of DNA methylation in maize domestication and improvement. Nature Communications. 11: 5539. PMID 33139747 DOI: 10.1038/s41467-020-19333-4 |
0.423 |
|
| 2020 |
Zhang M, Ma X, Wang C, Li Q, Meyers BC, Springer NM, Walbot V. CHH DNA methylation increases at 24-PHAS loci depend on 24-nt phasiRNAs in maize meiotic anthers. The New Phytologist. PMID 33135165 DOI: 10.1111/nph.17060 |
0.37 |
|
| 2020 |
Li Z, Zhou P, Della Coletta R, Zhang T, Brohammer AB, O'Connor C, Vaillancourt B, Lipzen A, Daum C, Barry K, de Leon N, Hirsch CD, Buell CR, Kaeppler SM, Springer NM, et al. Single-parent expression drives dynamic gene expression complementation in maize hybrids. The Plant Journal : For Cell and Molecular Biology. PMID 33098691 DOI: 10.1111/tpj.15042 |
0.355 |
|
| 2020 |
Crisp PA, Marand AP, Noshay JM, Zhou P, Lu Z, Schmitz RJ, Springer NM. Stable unmethylated DNA demarcates expressed genes and their cis-regulatory space in plant genomes. Proceedings of the National Academy of Sciences of the United States of America. PMID 32879011 DOI: 10.1073/Pnas.2010250117 |
0.534 |
|
| 2020 |
Weiss T, Wang C, Kang X, Zhao H, Gamo ME, Starker CG, Crisp PA, Zhou P, Springer NM, Voytas DF, Zhang F. Optimization of multiplexed CRISPR/Cas9 system for highly efficient genome editing in Setaria viridis. The Plant Journal : For Cell and Molecular Biology. PMID 32786122 DOI: 10.1111/Tpj.14949 |
0.401 |
|
| 2020 |
Li Z, Tirado SB, Kadam DC, Coffey L, Miller ND, Spalding EP, Lorenz AJ, de Leon N, Kaeppler SM, Schnable PS, Springer NM, Hirsch CN. Characterizing introgression-by-environment interactions using maize near isogenic lines. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 32572549 DOI: 10.1007/S00122-020-03630-Z |
0.381 |
|
| 2020 |
Monnahan PJ, Michno JM, O'Connor C, Brohammer AB, Springer NM, McGaugh SE, Hirsch CN. Using multiple reference genomes to identify and resolve annotation inconsistencies. Bmc Genomics. 21: 281. PMID 32264824 DOI: 10.1186/S12864-020-6696-8 |
0.459 |
|
| 2020 |
Zhou P, Li Z, Magnusson E, Cano FAG, Crisp PA, Noshay J, Grotewold E, Hirsch C, Briggs SP, Springer NM. Meta Gene Regulatory Networks in Maize Highlight Functionally Relevant Regulatory Interactions. The Plant Cell. PMID 32184350 DOI: 10.1105/Tpc.20.00080 |
0.413 |
|
| 2020 |
McFarland BA, AlKhalifah N, Bohn M, Bubert J, Buckler ES, Ciampitti I, Edwards J, Ertl D, Gage JL, Falcon CM, Flint-Garcia S, Gore MA, Graham C, Hirsch CN, Holland JB, ... ... Springer N, et al. Maize genomes to fields (G2F): 2014-2017 field seasons: genotype, phenotype, climatic, soil, and inbred ear image datasets. Bmc Research Notes. 13: 71. PMID 32051026 DOI: 10.1186/S13104-020-4922-8 |
0.342 |
|
| 2020 |
Ricci WA, Lu Z, Ji L, Marand AP, Ethridge CL, Murphy NG, Noshay JM, Galli M, Mejía-Guerra MK, Colomé-Tatché M, Johannes F, Rowley MJ, Corces VG, Zhai J, Scanlon MJ, ... ... Springer NM, et al. Author Correction: Widespread long-range cis-regulatory elements in the maize genome. Nature Plants. PMID 32029893 DOI: 10.1038/S41477-020-0600-Z |
0.327 |
|
| 2019 |
Xu J, Chen G, Hermanson PJ, Xu Q, Sun C, Chen W, Kan Q, Li M, Crisp PA, Yan J, Li L, Springer NM, Li Q. Population-level analysis reveals the widespread occurrence and phenotypic consequence of DNA methylation variation not tagged by genetic variation in maize. Genome Biology. 20: 243. PMID 31744513 DOI: 10.1186/S13059-019-1859-0 |
0.481 |
|
| 2019 |
Ricci WA, Lu Z, Ji L, Marand AP, Ethridge CL, Murphy NG, Noshay JM, Galli M, Mejía-Guerra MK, Colomé-Tatché M, Johannes F, Rowley MJ, Corces VG, Zhai J, Scanlon MJ, ... ... Springer NM, et al. Widespread long-range cis-regulatory elements in the maize genome. Nature Plants. PMID 31740773 DOI: 10.1038/S41477-019-0547-0 |
0.496 |
|
| 2019 |
Crisp PA, Hammond R, Zhou P, Vaillancourt B, Lipzen AM, Daum C, Barry KW, de Leon N, Buell CR, Kaeppler SM, Meyers BC, Hirsch C, Springer NM. Variation and inheritance of small RNAs in maize inbreds and F1 hybrids. Plant Physiology. PMID 31575624 DOI: 10.1104/Pp.19.00817 |
0.501 |
|
| 2019 |
Anderson SN, Stitzer MC, Zhou P, Ross-Ibarra J, Hirsch CD, Springer NM. Dynamic Patterns of Transcript Abundance of Transposable Element Families in Maize. G3 (Bethesda, Md.). PMID 31506319 DOI: 10.1534/G3.119.400431 |
0.444 |
|
| 2019 |
Noshay JM, Anderson SN, Zhou P, Ji L, Ricci W, Lu Z, Stitzer MC, Crisp PA, Hirsch CN, Zhang X, Schmitz RJ, Springer NM. Monitoring the interplay between transposable element families and DNA methylation in maize. Plos Genetics. 15: e1008291. PMID 31498837 DOI: 10.1371/Journal.Pgen.1008291 |
0.482 |
|
| 2019 |
Sartor RC, Noshay J, Springer NM, Briggs SP. Identification of the expressome by machine learning on omics data. Proceedings of the National Academy of Sciences of the United States of America. PMID 31420517 DOI: 10.1073/Pnas.1813645116 |
0.521 |
|
| 2019 |
Anderson SN, Stitzer MC, Brohammer AB, Zhou P, Noshay JM, O'Connor CH, Hirsch CD, Ross-Ibarra J, Hirsch CN, Springer NM. Transposable elements contribute to dynamic genome content in maize. The Plant Journal : For Cell and Molecular Biology. PMID 31381222 DOI: 10.1111/Tpj.14489 |
0.459 |
|
| 2019 |
Springer N, de León N, Grotewold E. Challenges of Translating Gene Regulatory Information into Agronomic Improvements. Trends in Plant Science. PMID 31377174 DOI: 10.1016/J.Tplants.2019.07.004 |
0.459 |
|
| 2019 |
Xue W, Anderson SN, Wang X, Yang L, Crisp PA, Li Q, Noshay J, Albert PS, Birchler JA, Bilinski P, Stitzer MC, Ross-Ibarra J, Flint-Garcia S, Chen X, Springer NM, et al. Hybrid Decay: A Transgenerational Epigenetic Decline in Vigor and Viability Triggered in Backcross Populations of Teosinte with Maize. Genetics. PMID 31320409 DOI: 10.1534/Genetics.119.302378 |
0.502 |
|
| 2019 |
Enders TA, St Dennis S, Oakland J, Callen ST, Gehan MA, Miller ND, Spalding EP, Springer NM, Hirsch CD. Classifying cold-stress responses of inbred maize seedlings using RGB imaging. Plant Direct. 3: e00104. PMID 31245751 DOI: 10.1002/pld3.104 |
0.757 |
|
| 2019 |
Tran TM, McCubbin TJ, Bihmidine S, Julius BT, Baker RF, Schauflinger M, Weil C, Springer N, Chomet P, Wagner R, Woessner J, Grote K, Peevers J, Slewinski TL, Braun DM. Maize Carbohydrate partitioning defective33 encodes a MCTP protein and functions in sucrose export from leaves. Molecular Plant. PMID 31102785 DOI: 10.1016/J.Molp.2019.05.001 |
0.302 |
|
| 2019 |
Wang J, Li X, Do Kim K, Scanlon MJ, Jackson SA, Springer NM, Yu J. Genome-wide nucleotide patterns and potential mechanisms of genome divergence following domestication in maize and soybean. Genome Biology. 20: 74. PMID 31018867 DOI: 10.1186/S13059-019-1683-6 |
0.453 |
|
| 2019 |
Crisp PA, Noshay JM, Anderson SN, Springer NM. Opportunities to Use DNA Methylation to Distil Functional Elements in Large Crop Genomes. Molecular Plant. PMID 30797889 DOI: 10.1016/J.Molp.2019.02.006 |
0.448 |
|
| 2019 |
Lawrence‐Dill CJ, Schnable PS, Springer NM. Idea Factory: the Maize Genomes to Fields Initiative Crop Science. 59: 1406-1410. DOI: 10.2135/Cropsci2019.02.0071 |
0.332 |
|
| 2018 |
Zhou P, Hirsch CN, Briggs SP, Springer NM. Dynamic patterns of gene expression additivity and regulatory variation throughout maize development. Molecular Plant. PMID 30593858 DOI: 10.1016/J.Molp.2018.12.015 |
0.448 |
|
| 2018 |
Liu S, Schnable JC, Ott A, Eddy Yeh CT, Springer NM, Yu J, Muehlbauer G, Timmermans MCP, Scanlon MJ, Schnable PS. Intragenic Meiotic Crossovers Generate Novel Alleles with Transgressive Expression Levels. Molecular Biology and Evolution. PMID 30184112 DOI: 10.1093/Molbev/Msy174 |
0.506 |
|
| 2018 |
Li L, Eichten SR, Shimizu R, Petsch K, Yeh CT, Wu W, Chettoor AM, Givan SA, Cole RA, Fowler JE, Evans MMS, Scanlon MJ, Yu J, Schnable PS, Timmermans MCP, ... Springer NM, et al. Correction to: Genome-wide discovery and characterization of maize long non-coding RNAs. Genome Biology. 19: 122. PMID 30134966 DOI: 10.1186/S13059-018-1508-Z |
0.714 |
|
| 2018 |
Springer NM, Anderson SN, Andorf CM, Ahern KR, Bai F, Barad O, Barbazuk WB, Bass HW, Baruch K, Ben-Zvi G, Buckler ES, Bukowski R, Campbell MS, Cannon EKS, Chomet P, et al. The maize W22 genome provides a foundation for functional genomics and transposon biology. Nature Genetics. PMID 30061736 DOI: 10.1038/S41588-018-0158-0 |
0.445 |
|
| 2018 |
AlKhalifah N, Campbell DA, Falcon CM, Gardiner JM, Miller ND, Romay MC, Walls R, Walton R, Yeh CT, Bohn M, Bubert J, Buckler ES, Ciampitti I, Flint-Garcia S, Gore MA, ... ... Springer N, et al. Maize Genomes to Fields: 2014 and 2015 field season genotype, phenotype, environment, and inbred ear image datasets. Bmc Research Notes. 11: 452. PMID 29986751 DOI: 10.1186/S13104-018-3508-1 |
0.385 |
|
| 2018 |
Han Z, Crisp PA, Stelpflug S, Kaeppler SM, Li Q, Springer NM. Heritable Epigenomic Changes to the Maize Methylome Resulting from Tissue Culture. Genetics. PMID 29848487 DOI: 10.1534/Genetics.118.300987 |
0.469 |
|
| 2018 |
Anderson SN, Zynda G, Song J, Han Z, Vaughn M, Li Q, Springer NM. Subtle Perturbations of the Maize Methylome Reveal Genes and Transposons Silenced by Chromomethylase or RNA-Directed DNA Methylation Pathways. G3 (Bethesda, Md.). PMID 29618467 DOI: 10.1534/G3.118.200284 |
0.541 |
|
| 2018 |
Hirsch CN, Springer NM. Weeding out bad alleles. Nature Plants. PMID 29556084 DOI: 10.1038/S41477-018-0133-X |
0.425 |
|
| 2018 |
Anderson SN, Springer NM. Potential roles for transposable elements in creating imprinted expression. Current Opinion in Genetics & Development. 49: 8-14. PMID 29453082 DOI: 10.1016/J.Gde.2018.01.008 |
0.458 |
|
| 2018 |
Li L, Petsch K, Shimizu R, Liu S, Xu WW, Ying K, Yu J, Scanlon MJ, Schnable PS, Timmermans MCP, Springer NM, Muehlbauer GJ. Correction: Mendelian and Non-Mendelian Regulation of Gene Expression in Maize. Plos Genetics. 14: e1007234. PMID 29444085 DOI: 10.1371/Journal.Pgen.1007234 |
0.359 |
|
| 2018 |
Li Z, Coffey L, Garfin J, Miller ND, White MR, Spalding EP, de Leon N, Kaeppler SM, Schnable PS, Springer NM, Hirsch CN. Genotype-by-environment interactions affecting heterosis in maize. Plos One. 13: e0191321. PMID 29342221 DOI: 10.1371/Journal.Pone.0191321 |
0.344 |
|
| 2018 |
Li Q, Hermanson PJ, Springer NM. Detection of DNA Methylation by Whole-Genome Bisulfite Sequencing. Methods in Molecular Biology (Clifton, N.J.). 1676: 185-196. PMID 28986911 DOI: 10.1007/978-1-4939-7315-6_11 |
0.489 |
|
| 2017 |
Wicker T, Schulman AH, Tanskanen J, Spannagl M, Twardziok S, Mascher M, Springer NM, Li Q, Waugh R, Li C, Zhang G, Stein N, Mayer KFX, Gundlach H. The repetitive landscape of the 5100 Mbp barley genome. Mobile Dna. 8: 22. PMID 29270235 DOI: 10.1186/S13100-017-0102-3 |
0.438 |
|
| 2017 |
Brohammer AB, Kono TJ, Springer NM, McGaugh SE, Hirsch CN. Limited role of differential fractionation in genome content variation and function in maize (Zea mays L.) inbred lines. The Plant Journal : For Cell and Molecular Biology. PMID 29124819 DOI: 10.1111/Tpj.13765 |
0.504 |
|
| 2017 |
Gage JL, Jarquin D, Romay C, Lorenz A, Buckler ES, Kaeppler S, Alkhalifah N, Bohn M, Campbell DA, Edwards J, Ertl D, Flint-Garcia S, Gardiner J, Good B, Hirsch CN, ... ... Springer NM, et al. The effect of artificial selection on phenotypic plasticity in maize. Nature Communications. 8: 1348. PMID 29116144 DOI: 10.1038/S41467-017-01450-2 |
0.386 |
|
| 2017 |
He Y, Wang M, Dukowic-Schulze S, Zhou A, Tiang CL, Shilo S, Sidhu GK, Eichten S, Bradbury P, Springer NM, Buckler ES, Levy AA, Sun Q, Pillardy J, Kianian PMA, et al. Genomic features shaping the landscape of meiotic double-strand-break hotspots in maize. Proceedings of the National Academy of Sciences of the United States of America. PMID 29087335 DOI: 10.1073/Pnas.1713225114 |
0.796 |
|
| 2017 |
Oka R, Zicola J, Weber B, Anderson SN, Hodgman C, Gent JI, Wesselink JJ, Springer NM, Hoefsloot HCJ, Turck F, Stam M. Genome-wide mapping of transcriptional enhancer candidates using DNA and chromatin features in maize. Genome Biology. 18: 137. PMID 28732548 DOI: 10.1186/S13059-017-1273-4 |
0.524 |
|
| 2017 |
Springer NM, Schmitz RJ. Exploiting induced and natural epigenetic variation for crop improvement. Nature Reviews. Genetics. PMID 28669983 DOI: 10.1038/Nrg.2017.45 |
0.415 |
|
| 2017 |
Jiao Y, Peluso P, Shi J, Liang T, Stitzer MC, Wang B, Campbell MS, Stein JC, Wei X, Chin CS, Guill K, Regulski M, Kumari S, Olson A, Gent J, ... ... Springer NM, et al. Improved maize reference genome with single-molecule technologies. Nature. PMID 28605751 DOI: 10.1038/Nature22971 |
0.453 |
|
| 2017 |
Mei W, Liu S, Schnable JC, Yeh CT, Springer NM, Schnable PS, Barbazuk WB. A Comprehensive Analysis of Alternative Splicing in Paleopolyploid Maize. Frontiers in Plant Science. 8: 694. PMID 28539927 DOI: 10.3389/Fpls.2017.00694 |
0.484 |
|
| 2017 |
Vishwanathan N, Bandyopadhyay A, Fu HY, Johnson KC, Springer NM, Hu WS. A COMPARATIVE GENOMIC HYBRIDIZATION APPROACH TO STUDY GENE COPY NUMBER VARIATIONS AMONG CHINESE HAMSTER CELL LINES. Biotechnology and Bioengineering. PMID 28409824 DOI: 10.1002/Bit.26311 |
0.42 |
|
| 2016 |
Song J, Zynda G, Beck S, Springer NM, Vaughn MW. Bisulfite Sequence Analyses Using CyVerse Discovery Environment: From Mapping to DMRs. Current Protocols in Plant Biology. 1: 510-529. PMID 31725961 DOI: 10.1002/cppb.20034 |
0.327 |
|
| 2016 |
Waters AJ, Makarevitch I, Noshay J, Burghardt LT, Hirsch CN, Hirsch CD, Springer NM. Natural variation for gene expression responses to abiotic stress in maize. The Plant Journal : For Cell and Molecular Biology. PMID 28188666 DOI: 10.1111/Tpj.13414 |
0.411 |
|
| 2016 |
Li L, Briskine R, Schaefer R, Schnable PS, Myers CL, Flagel LE, Springer NM, Muehlbauer GJ. Co-expression network analysis of duplicate genes in maize (Zea mays L.) reveals no subgenome bias. Bmc Genomics. 17: 875. PMID 27814670 DOI: 10.1186/S12864-016-3194-0 |
0.436 |
|
| 2016 |
Hirsch C, Hirsch CD, Brohammer AB, Bowman MJ, Soifer I, Barad O, Shem-Tov D, Baruch K, Lu F, Hernandez AG, Fields CJ, Wright CL, Koehler K, Springer NM, Buckler ES, et al. Draft Assembly of Elite Inbred Line PH207 Provides Insights into Genomic and Transcriptome Diversity in Maize. The Plant Cell. PMID 27803309 DOI: 10.1105/Tpc.16.00353 |
0.487 |
|
| 2016 |
Niederhuth CE, Bewick AJ, Ji L, Alabady MS, Kim KD, Li Q, Rohr NA, Rambani A, Burke JM, Udall JA, Egesi C, Schmutz J, Grimwood J, Jackson SA, Springer NM, et al. Widespread natural variation of DNA methylation within angiosperms. Genome Biology. 17: 194. PMID 27671052 DOI: 10.1186/S13059-016-1059-0 |
0.473 |
|
| 2016 |
Altpeter F, Springer NM, Bartley LE, Blechl A, Brutnell TP, Citovsky V, Conrad L, Gelvin SB, Jackson D, Kausch AP, Lemaux PG, Medford JI, Orozo-Cardenas M, Tricoli D, VanEck J, et al. Advancing Crop Transformation in the Era of Genome Editing. The Plant Cell. PMID 27335450 DOI: 10.1105/Tpc.16.00196 |
0.351 |
|
| 2016 |
Hirsch CD, Springer NM. Transposable element influences on gene expression in plants. Biochimica Et Biophysica Acta. PMID 27235540 DOI: 10.1016/J.Bbagrm.2016.05.010 |
0.506 |
|
| 2016 |
Springer NM, Li Q, Lisch D. Creating order from chaos: epigenome dynamics in plants with complex genomes. The Plant Cell. PMID 26869701 DOI: 10.1105/Tpc.15.00911 |
0.509 |
|
| 2015 |
Springer NM. Transposable elements: Microbiomes in the genomes. Nature Plants. 1: 15004. PMID 27251779 DOI: 10.1038/Nplants.2015.4 |
0.399 |
|
| 2015 |
Li Q, Gent JI, Zynda G, Song J, Makarevitch I, Hirsch CD, Hirsch CN, Dawe RK, Madzima TF, McGinnis KM, Lisch D, Schmitz RJ, Vaughn MW, Springer NM. RNA-directed DNA methylation enforces boundaries between heterochromatin and euchromatin in the maize genome. Proceedings of the National Academy of Sciences of the United States of America. PMID 26553984 DOI: 10.1073/Pnas.1514680112 |
0.541 |
|
| 2015 |
Makarevitch I, Waters AJ, West PT, Stitzer M, Hirsch CN, Ross-Ibarra J, Springer NM. Correction: Transposable Elements Contribute to Activation of Maize Genes in Response to Abiotic Stress. Plos Genetics. 11: e1005566. PMID 26452261 DOI: 10.1371/Journal.Pgen.1005566 |
0.315 |
|
| 2015 |
Hirsch CD, Springer NM, Hirsch CN. Genomic limitations to RNA sequencing expression profiling. The Plant Journal : For Cell and Molecular Biology. 84: 491-503. PMID 26331235 DOI: 10.1111/Tpj.13014 |
0.479 |
|
| 2015 |
Springer NM, McGinnis KM. Paramutation in evolution, population genetics and breeding. Seminars in Cell & Developmental Biology. PMID 26325077 DOI: 10.1016/J.Semcdb.2015.08.010 |
0.441 |
|
| 2015 |
Eichten SR, Springer NM. Minimal evidence for consistent changes in maize DNA methylation patterns following environmental stress. Frontiers in Plant Science. 6: 308. PMID 25999972 DOI: 10.3389/Fpls.2015.00308 |
0.757 |
|
| 2015 |
Li Q, Song J, West PT, Zynda G, Eichten SR, Vaughn MW, Springer NM. Examining the causes and consequences of context-specific differential DNA methylation in maize. Plant Physiology. PMID 25869653 DOI: 10.1104/Pp.15.00052 |
0.812 |
|
| 2015 |
Li Q, Suzuki M, Wendt J, Patterson N, Eichten SR, Hermanson PJ, Green D, Jeddeloh J, Richmond T, Rosenbaum H, Burgess D, Springer NM, Greally JM. Post-conversion targeted capture of modified cytosines in mammalian and plant genomes. Nucleic Acids Research. 43: e81. PMID 25813045 DOI: 10.1093/Nar/Gkv244 |
0.744 |
|
| 2015 |
Makarevitch I, Waters AJ, West PT, Stitzer M, Hirsch CN, Ross-Ibarra J, Springer NM. Transposable elements contribute to activation of maize genes in response to abiotic stress. Plos Genetics. 11: e1004915. PMID 25569788 DOI: 10.1371/Journal.Pgen.1004915 |
0.469 |
|
| 2014 |
Li Q, Eichten SR, Hermanson PJ, Zaunbrecher VM, Song J, Wendt J, Rosenbaum H, Madzima TF, Sloan AE, Huang J, Burgess DL, Richmond TA, McGinnis KM, Meeley RB, Danilevskaya ON, ... ... Springer NM, et al. Genetic perturbation of the maize methylome. The Plant Cell. 26: 4602-16. PMID 25527708 DOI: 10.1105/Tpc.114.133140 |
0.791 |
|
| 2014 |
Belova T, Grønvold L, Kumar A, Kianian S, He X, Lillemo M, Springer NM, Lien S, Olsen OA, Sandve SR. Utilization of deletion bins to anchor and order sequences along the wheat 7B chromosome. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 127: 2029-40. PMID 25134516 DOI: 10.1007/S00122-014-2358-Z |
0.589 |
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| 2014 |
West PT, Li Q, Ji L, Eichten SR, Song J, Vaughn MW, Schmitz RJ, Springer NM. Genomic distribution of H3K9me2 and DNA methylation in a maize genome. Plos One. 9: e105267. PMID 25122127 DOI: 10.1371/Journal.Pone.0105267 |
0.79 |
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| 2014 |
Hirsch CN, Flint-Garcia SA, Beissinger TM, Eichten SR, Deshpande S, Barry K, McMullen MD, Holland JB, Buckler ES, Springer N, Buell CR, de Leon N, Kaeppler SM. Insights into the effects of long-term artificial selection on seed size in maize. Genetics. 198: 409-21. PMID 25037958 DOI: 10.1534/Genetics.114.167155 |
0.737 |
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| 2014 |
Stelpflug SC, Eichten SR, Hermanson PJ, Springer NM, Kaeppler SM. Consistent and heritable alterations of DNA methylation are induced by tissue culture in maize. Genetics. 198: 209-18. PMID 25023398 DOI: 10.1534/Genetics.114.165480 |
0.765 |
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| 2014 |
Penning BW, Sykes RW, Babcock NC, Dugard CK, Held MA, Klimek JF, Shreve JT, Fowler M, Ziebell A, Davis MF, Decker SR, Turner GB, Mosier NS, Springer NM, Thimmapuram J, et al. Genetic Determinants for Enzymatic Digestion of Lignocellulosic Biomass Are Independent of Those for Lignin Abundance in a Maize Recombinant Inbred Population. Plant Physiology. 165: 1475-1487. PMID 24972714 DOI: 10.1104/Pp.114.242446 |
0.482 |
|
| 2014 |
Schaefer RJ, Briskine R, Springer NM, Myers CL. Discovering functional modules across diverse maize transcriptomes using COB, the Co-expression Browser. Plos One. 9: e99193. PMID 24922320 DOI: 10.1371/Journal.Pone.0099193 |
0.425 |
|
| 2014 |
Eichten SR, Schmitz RJ, Springer NM. Epigenetics: Beyond Chromatin Modifications and Complex Genetic Regulation. Plant Physiology. 165: 933-947. PMID 24872382 DOI: 10.1104/Pp.113.234211 |
0.752 |
|
| 2014 |
Thompson AM, Crants J, Schnable PS, Yu J, Timmermans MC, Springer NM, Scanlon MJ, Muehlbauer GJ. Genetic control of maize shoot apical meristem architecture. G3 (Bethesda, Md.). 4: 1327-37. PMID 24855316 DOI: 10.1534/G3.114.011940 |
0.409 |
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| 2014 |
Li L, Eichten SR, Shimizu R, Petsch K, Yeh CT, Wu W, Chettoor AM, Givan SA, Cole RA, Fowler JE, Evans MM, Scanlon MJ, Yu J, Schnable PS, Timmermans MC, ... Springer NM, et al. Genome-wide discovery and characterization of maize long non-coding RNAs. Genome Biology. 15: R40. PMID 24576388 DOI: 10.1186/Gb-2014-15-2-R40 |
0.719 |
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| 2014 |
Li Q, Eichten SR, Hermanson PJ, Springer NM. Inheritance patterns and stability of DNA methylation variation in maize near-isogenic lines. Genetics. 196: 667-76. PMID 24361940 DOI: 10.1534/Genetics.113.158980 |
0.765 |
|
| 2013 |
Waters AJ, Bilinski P, Eichten SR, Vaughn MW, Ross-Ibarra J, Gehring M, Springer NM. Comprehensive analysis of imprinted genes in maize reveals allelic variation for imprinting and limited conservation with other species. Proceedings of the National Academy of Sciences of the United States of America. 110: 19639-44. PMID 24218619 DOI: 10.1073/Pnas.1309182110 |
0.781 |
|
| 2013 |
Eichten SR, Briskine R, Song J, Li Q, Swanson-Wagner R, Hermanson PJ, Waters AJ, Starr E, West PT, Tiffin P, Myers CL, Vaughn MW, Springer NM. Epigenetic and genetic influences on DNA methylation variation in maize populations. The Plant Cell. 25: 2783-97. PMID 23922207 DOI: 10.1105/Tpc.113.114793 |
0.786 |
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| 2013 |
Muñoz-Amatriaín M, Eichten SR, Wicker T, Richmond TA, Mascher M, Steuernagel B, Scholz U, Ariyadasa R, Spannagl M, Nussbaumer T, Mayer KF, Taudien S, Platzer M, Jeddeloh JA, Springer NM, et al. Distribution, functional impact, and origin mechanisms of copy number variation in the barley genome. Genome Biology. 14: R58. PMID 23758725 DOI: 10.1186/Gb-2013-14-6-R58 |
0.739 |
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| 2013 |
Sekhon RS, Briskine R, Hirsch CN, Myers CL, Springer NM, Buell CR, de Leon N, Kaeppler SM. Maize gene atlas developed by RNA sequencing and comparative evaluation of transcriptomes based on RNA sequencing and microarrays. Plos One. 8: e61005. PMID 23637782 DOI: 10.1371/Journal.Pone.0061005 |
0.368 |
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| 2013 |
Makarevitch I, Eichten SR, Briskine R, Waters AJ, Danilevskaya ON, Meeley RB, Myers CL, Vaughn MW, Springer NM. Genomic distribution of maize facultative heterochromatin marked by trimethylation of H3K27. The Plant Cell. 25: 780-93. PMID 23463775 DOI: 10.1105/Tpc.112.106427 |
0.786 |
|
| 2013 |
Schnable PS, Springer NM. Progress toward understanding heterosis in crop plants. Annual Review of Plant Biology. 64: 71-88. PMID 23394499 DOI: 10.1146/Annurev-Arplant-042110-103827 |
0.506 |
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| 2013 |
Li L, Petsch K, Shimizu R, Liu S, Xu WW, Ying K, Yu J, Scanlon MJ, Schnable PS, Timmermans MC, Springer NM, Muehlbauer GJ. Mendelian and non-Mendelian regulation of gene expression in maize. Plos Genetics. 9: e1003202. PMID 23341782 DOI: 10.1371/Journal.Pgen.1003202 |
0.517 |
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| 2013 |
Springer NM. Epigenetics and crop improvement. Trends in Genetics : Tig. 29: 241-7. PMID 23128009 DOI: 10.1016/J.Tig.2012.10.009 |
0.449 |
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| 2013 |
Eichten SR, Vaughn MW, Hermanson PJ, Springer NM. Variation in DNA methylation patterns is more common among maize inbreds than among tissues Plant Genome. 6. DOI: 10.3835/Plantgenome2012.06.0009 |
0.778 |
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| 2012 |
Eichten SR, Ellis NA, Makarevitch I, Yeh CT, Gent JI, Guo L, McGinnis KM, Zhang X, Schnable PS, Vaughn MW, Dawe RK, Springer NM. Spreading of heterochromatin is limited to specific families of maize retrotransposons. Plos Genetics. 8: e1003127. PMID 23271981 DOI: 10.1371/Journal.Pgen.1003127 |
0.769 |
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| 2012 |
Swanson-Wagner R, Briskine R, Schaefer R, Hufford MB, Ross-Ibarra J, Myers CL, Tiffin P, Springer NM. Reshaping of the maize transcriptome by domestication. Proceedings of the National Academy of Sciences of the United States of America. 109: 11878-83. PMID 22753482 DOI: 10.1073/Pnas.1201961109 |
0.501 |
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| 2012 |
Liu S, Ying K, Yeh CT, Yang J, Swanson-Wagner R, Wu W, Richmond T, Gerhardt DJ, Lai J, Springer N, Nettleton D, Jeddeloh JA, Schnable PS. Changes in genome content generated via segregation of non-allelic homologs. The Plant Journal : For Cell and Molecular Biology. 72: 390-9. PMID 22731681 DOI: 10.1111/J.1365-313X.2012.05087.X |
0.48 |
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| 2012 |
Hufford MB, Xu X, van Heerwaarden J, Pyhäjärvi T, Chia JM, Cartwright RA, Elshire RJ, Glaubitz JC, Guill KE, Kaeppler SM, Lai J, Morrell PL, Shannon LM, Song C, Springer NM, et al. Comparative population genomics of maize domestication and improvement. Nature Genetics. 44: 808-11. PMID 22660546 DOI: 10.1038/Ng.2309 |
0.493 |
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| 2012 |
Makarevitch I, Thompson A, Muehlbauer GJ, Springer NM. Brd1 gene in maize encodes a brassinosteroid C-6 oxidase. Plos One. 7: e30798. PMID 22292043 DOI: 10.1371/Journal.Pone.0030798 |
0.349 |
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| 2011 |
Waters AJ, Makarevitch I, Eichten SR, Swanson-Wagner RA, Yeh CT, Xu W, Schnable PS, Vaughn MW, Gehring M, Springer NM. Parent-of-origin effects on gene expression and DNA methylation in the maize endosperm. The Plant Cell. 23: 4221-33. PMID 22198147 DOI: 10.1105/Tpc.111.092668 |
0.799 |
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| 2011 |
Eichten SR, Swanson-Wagner RA, Schnable JC, Waters AJ, Hermanson PJ, Liu S, Yeh CT, Jia Y, Gendler K, Freeling M, Schnable PS, Vaughn MW, Springer NM. Heritable epigenetic variation among maize inbreds. Plos Genetics. 7: e1002372. PMID 22125494 DOI: 10.1371/Journal.Pgen.1002372 |
0.788 |
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| 2011 |
Eichten SR, Foerster JM, de Leon N, Kai Y, Yeh CT, Liu S, Jeddeloh JA, Schnable PS, Kaeppler SM, Springer NM. B73-Mo17 near-isogenic lines demonstrate dispersed structural variation in maize. Plant Physiology. 156: 1679-90. PMID 21705654 DOI: 10.1104/Pp.111.174748 |
0.75 |
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| 2011 |
Schnable JC, Springer NM, Freeling M. Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss. Proceedings of the National Academy of Sciences of the United States of America. 108: 4069-74. PMID 21368132 DOI: 10.1073/Pnas.1101368108 |
0.488 |
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| 2011 |
Haun WJ, Hyten DL, Xu WW, Gerhardt DJ, Albert TJ, Richmond T, Jeddeloh JA, Jia G, Springer NM, Vance CP, Stupar RM. The composition and origins of genomic variation among individuals of the soybean reference cultivar Williams 82. Plant Physiology. 155: 645-55. PMID 21115807 DOI: 10.1104/Pp.110.166736 |
0.818 |
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| 2011 |
St. Pierre S, Springer NM, Muehlbauer GJ. Density Stress has Minimal Impacts on the Barley or Maize Seedling Transcriptome The Plant Genome. 4: 47-54. DOI: 10.3835/Plantgenome2010.08.0020 |
0.371 |
|
| 2010 |
Fu Y, Springer NM, Ying K, Yeh CT, Iniguez AL, Richmond T, Wu W, Barbazuk B, Nettleton D, Jeddeloh J, Schnable PS. High-resolution genotyping via whole genome hybridizations to microarrays containing long oligonucleotide probes. Plos One. 5: e14178. PMID 21152036 DOI: 10.1371/Journal.Pone.0014178 |
0.429 |
|
| 2010 |
Springer NM. Isolation of plant DNA for PCR and genotyping using organic extraction and CTAB. Cold Spring Harbor Protocols. 2010: pdb.prot5515. PMID 21041388 DOI: 10.1101/Pdb.Prot5515 |
0.342 |
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| 2010 |
Swanson-Wagner RA, Eichten SR, Kumari S, Tiffin P, Stein JC, Ware D, Springer NM. Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor. Genome Research. 20: 1689-99. PMID 21036921 DOI: 10.1101/Gr.109165.110 |
0.784 |
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| 2010 |
Lai J, Li R, Xu X, Jin W, Xu M, Zhao H, Xiang Z, Song W, Ying K, Zhang M, Jiao Y, Ni P, Zhang J, Li D, Guo X, ... ... Springer NM, et al. Genome-wide patterns of genetic variation among elite maize inbred lines. Nature Genetics. 42: 1027-30. PMID 20972441 DOI: 10.1038/Ng.684 |
0.464 |
|
| 2010 |
Springer N. Shaping a better rice plant Nature Genetics. 42: 475-476. PMID 20502488 DOI: 10.1038/Ng0610-475 |
0.345 |
|
| 2010 |
Springer NM, Jackson SA. Realizing the potential of genomics for crop improvement. Briefings in Functional Genomics. 9: 93-4. PMID 20332093 DOI: 10.1093/Bfgp/Elq006 |
0.36 |
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| 2010 |
Fu Y, Springer NM, Gerhardt DJ, Ying K, Yeh CT, Wu W, Swanson-Wagner R, D'Ascenzo M, Millard T, Freeberg L, Aoyama N, Kitzman J, Burgess D, Richmond T, Albert TJ, et al. Repeat subtraction-mediated sequence capture from a complex genome. The Plant Journal : For Cell and Molecular Biology. 62: 898-909. PMID 20230488 DOI: 10.1111/J.1365-313X.2010.04196.X |
0.418 |
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| 2010 |
Liu S, Chen HD, Makarevitch I, Shirmer R, Emrich SJ, Dietrich CR, Barbazuk WB, Springer NM, Schnable PS. High-throughput genetic mapping of mutants via quantitative single nucleotide polymorphism typing. Genetics. 184: 19-26. PMID 19884313 DOI: 10.1534/Genetics.109.107557 |
0.338 |
|
| 2009 |
Schnable PS, Ware D, Fulton RS, Stein JC, Wei F, Pasternak S, Liang C, Zhang J, Fulton L, Graves TA, Minx P, Reily AD, Courtney L, Kruchowski SS, Tomlinson C, ... ... Springer NM, et al. The B73 maize genome: complexity, diversity, and dynamics. Science (New York, N.Y.). 326: 1112-5. PMID 19965430 DOI: 10.1126/Science.1178534 |
0.506 |
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| 2009 |
Springer NM, Ying K, Fu Y, Ji T, Yeh CT, Jia Y, Wu W, Richmond T, Kitzman J, Rosenbaum H, Iniguez AL, Barbazuk WB, Jeddeloh JA, Nettleton D, Schnable PS. Maize inbreds exhibit high levels of copy number variation (CNV) and presence/absence variation (PAV) in genome content. Plos Genetics. 5: e1000734. PMID 19956538 DOI: 10.1371/Journal.Pgen.1000734 |
0.513 |
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| 2009 |
Flint-Garcia SA, Buckler ES, Tiffin P, Ersoz E, Springer NM. Heterosis is prevalent for multiple traits in diverse maize germplasm. Plos One. 4: e7433. PMID 19823591 DOI: 10.1371/Journal.Pone.0007433 |
0.375 |
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| 2009 |
Springer NM. Small RNAs: how seeds remember to obey their mother. Current Biology : Cb. 19: R649-51. PMID 19674547 DOI: 10.1016/J.Cub.2009.06.049 |
0.337 |
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| 2009 |
Chaudhary B, Flagel L, Stupar RM, Udall JA, Verma N, Springer NM, Wendel JF. Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (gossypium). Genetics. 182: 503-17. PMID 19363125 DOI: 10.1534/Genetics.109.102608 |
0.484 |
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| 2009 |
Haun WJ, Danilevskaya ON, Meeley RB, Springer NM. Disruption of imprinting by mutator transposon insertions in the 5' proximal regions of the Zea mays Mez1 locus. Genetics. 181: 1229-37. PMID 19204379 DOI: 10.1534/Genetics.108.093666 |
0.798 |
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| 2009 |
Gray J, Bevan M, Brutnell T, Buell CR, Cone K, Hake S, Jackson D, Kellogg E, Lawrence C, McCouch S, Mockler T, Moose S, Paterson A, Peterson T, Rokshar D, ... ... Springer N, et al. A recommendation for naming transcription factor proteins in the grasses. Plant Physiology. 149: 4-6. PMID 19126689 DOI: 10.1104/Pp.108.128504 |
0.357 |
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| 2009 |
Springer NM, Kaeppler SM. Chapter 3 Epigenetics. The Second Genetic Code Advances in Agronomy. 100: 59-80. DOI: 10.1016/S0065-2113(08)00603-2 |
0.525 |
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| 2009 |
Springer NM, Gutierrez-Marcos JF. Imprinting in maize Handbook of Maize: Genetics and Genomics. 429-440. DOI: 10.1007/978-0-387-77863-1_21 |
0.582 |
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| 2009 |
Springer NM, Eichten S, Smith A, Papa CM, Steinway S, Kaeppler SM. Characterization of a novel maize retrotransposon family sprite that shows high levels of variability among maize inbred lines Maydica. 54: 417-428. |
0.658 |
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| 2008 |
Haun WJ, Springer NM. Maternal and paternal alleles exhibit differential histone methylation and acetylation at maize imprinted genes. The Plant Journal : For Cell and Molecular Biology. 56: 903-12. PMID 18694457 DOI: 10.1111/J.1365-313X.2008.03649.X |
0.811 |
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| 2008 |
Stupar RM, Gardiner JM, Oldre AG, Haun WJ, Chandler VL, Springer NM. Gene expression analyses in maize inbreds and hybrids with varying levels of heterosis. Bmc Plant Biology. 8: 33. PMID 18402703 DOI: 10.1186/1471-2229-8-33 |
0.798 |
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| 2008 |
Makarevitch I, Phillips RL, Springer NM. Profiling expression changes caused by a segmental aneuploid in maize. Bmc Genomics. 9: 7. PMID 18186930 DOI: 10.1186/1471-2164-9-7 |
0.61 |
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| 2007 |
Stupar RM, Hermanson PJ, Springer NM. Nonadditive expression and parent-of-origin effects identified by microarray and allele-specific expression profiling of maize endosperm. Plant Physiology. 145: 411-25. PMID 17766400 DOI: 10.1104/Pp.107.101428 |
0.482 |
|
| 2007 |
Springer NM, Stupar RM. Allele-specific expression patterns reveal biases and embryo-specific parent-of-origin effects in hybrid maize. The Plant Cell. 19: 2391-402. PMID 17693532 DOI: 10.1105/Tpc.107.052258 |
0.465 |
|
| 2007 |
Makarevitch I, Stupar RM, Iniguez AL, Haun WJ, Barbazuk WB, Kaeppler SM, Springer NM. Natural variation for alleles under epigenetic control by the maize chromomethylase zmet2. Genetics. 177: 749-60. PMID 17660570 DOI: 10.1534/Genetics.107.072702 |
0.817 |
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| 2007 |
McGinnis K, Murphy N, Carlson AR, Akula A, Akula C, Basinger H, Carlson M, Hermanson P, Kovacevic N, McGill MA, Seshadri V, Yoyokie J, Cone K, Kaeppler HF, Kaeppler SM, ... Springer NM, et al. Assessing the efficiency of RNA interference for maize functional genomics. Plant Physiology. 143: 1441-51. PMID 17307899 DOI: 10.1104/Pp.106.094334 |
0.451 |
|
| 2007 |
Springer NM, Stupar RM. Allelic variation and heterosis in maize: how do two halves make more than a whole? Genome Research. 17: 264-75. PMID 17255553 DOI: 10.1101/Gr.5347007 |
0.495 |
|
| 2007 |
Haun WJ, Laoueillé-Duprat S, O'connell MJ, Spillane C, Grossniklaus U, Phillips AR, Kaeppler SM, Springer NM. Genomic imprinting, methylation and molecular evolution of maize Enhancer of zeste (Mez) homologs. The Plant Journal : For Cell and Molecular Biology. 49: 325-37. PMID 17181776 DOI: 10.1111/J.1365-313X.2006.02965.X |
0.825 |
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| 2006 |
Stupar RM, Springer NM. Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression patterns in the F1 hybrid. Genetics. 173: 2199-210. PMID 16702414 DOI: 10.1534/Genetics.106.060699 |
0.473 |
|
| 2005 |
Springer NM, Kaeppler SM. Evolutionary divergence of monocot and dicot methyl-CpG-binding domain proteins. Plant Physiology. 138: 92-104. PMID 15888682 DOI: 10.1104/Pp.105.060566 |
0.44 |
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| 2005 |
McGinnis K, Chandler V, Cone K, Kaeppler H, Kaeppler S, Kerschen A, Pikaard C, Richards E, Sidorenko L, Smith T, Springer N, Wulan T. Transgene-induced RNA interference as a tool for plant functional genomics. Methods in Enzymology. 392: 1-24. PMID 15644172 DOI: 10.1016/S0076-6879(04)92001-0 |
0.429 |
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| 2004 |
Springer NM, Xu X, Barbazuk WB. Utility of different gene enrichment approaches toward identifying and sequencing the maize gene space. Plant Physiology. 136: 3023-33. PMID 15299128 DOI: 10.1104/Pp.104.043323 |
0.468 |
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| 2004 |
Till BJ, Reynolds SH, Weil C, Springer N, Burtner C, Young K, Bowers E, Codomo CA, Enns LC, Odden AR, Greene EA, Comai L, Henikoff S. Discovery of induced point mutations in maize genes by TILLING. Bmc Plant Biology. 4: 12. PMID 15282033 DOI: 10.1186/1471-2229-4-12 |
0.423 |
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| 2002 |
Springer NM, Danilevskaya ON, Hermon P, Helentjaris TG, Phillips RL, Kaeppler HF, Kaeppler SM. Sequence relationships, conserved domains, and expression patterns for maize homologs of the polycomb group genes E(z), esc, and E(Pc). Plant Physiology. 128: 1332-45. PMID 11950982 DOI: 10.1104/Pp.010742 |
0.591 |
|
| 2001 |
Papa CM, Springer NM, Muszynski MG, Meeley R, Kaeppler SM. Maize chromomethylase Zea methyltransferase2 is required for CpNpG methylation. The Plant Cell. 13: 1919-28. PMID 11487702 DOI: 10.1105/Tpc.010064 |
0.471 |
|
| 2000 |
Cao X, Springer NM, Muszynski MG, Phillips RL, Kaeppler S, Jacobsen SE. Conserved plant genes with similarity to mammalian de novo DNA methyltransferases. Proceedings of the National Academy of Sciences of the United States of America. 97: 4979-84. PMID 10781108 DOI: 10.1073/Pnas.97.9.4979 |
0.607 |
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