Kevin W. Eliceiri - Publications

Affiliations: 
Medical Physics University of Wisconsin, Madison, Madison, WI 
Area:
Radiology, Oncology, Molecular Biology

100 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Marino KM, Squirrell JM, Chacko JV, Watters JW, Eliceiri KW, Ulland TK. Metabolic response of microglia to amyloid deposition during Alzheimer's disease progression in a mouse model. Biorxiv : the Preprint Server For Biology. PMID 37214940 DOI: 10.1101/2023.05.12.540407  0.657
2022 Haynes EM, Burnett KH, He J, Jean-Pierre MW, Jarzyna M, Eliceiri KW, Huisken J, Halloran MC. KLC4 shapes axon arbors during development and mediates adult behavior. Elife. 11. PMID 36222498 DOI: 10.7554/eLife.74270  0.493
2022 Haynes EM, Ulland TK, Eliceiri KW. A Model of Discovery: The Role of Imaging Established and Emerging Non-mammalian Models in Neuroscience. Frontiers in Molecular Neuroscience. 15: 867010. PMID 35493325 DOI: 10.3389/fnmol.2022.867010  0.663
2021 Wang S, Fan J, Pocock G, Arena ET, Eliceiri KW, Yuan M. Structured Correlation Detection with Application to Colocalization Analysis in Dual-Channel Fluorescence Microscopic Imaging Statistica Sinica. DOI: 10.5705/Ss.202018.0230  0.315
2020 Sagar MAK, Cheng KP, Ouellette JN, Williams JC, Watters JJ, Eliceiri KW. Machine Learning Methods for Fluorescence Lifetime Imaging (FLIM) Based Label-Free Detection of Microglia. Frontiers in Neuroscience. 14: 931. PMID 33013309 DOI: 10.3389/Fnins.2020.00931  0.369
2020 Dietz C, Rueden CT, Helfrich S, Dobson ETA, Horn M, Eglinger J, Evans EL, McLean DT, Novitskaya T, Ricke WA, Sherer NM, Zijlstra A, Berthold MR, Eliceiri KW. Integration of the ImageJ Ecosystem in the KNIME Analytics Platform. Frontiers in Computer Science. 2. PMID 32905440 DOI: 10.3389/Fcomp.2020.00008  0.337
2020 Sagar MAK, Ouellette JN, Cheng KP, Williams JC, Watters JJ, Eliceiri KW. Microglia activation visualization via fluorescence lifetime imaging microscopy of intrinsically fluorescent metabolic cofactors. Neurophotonics. 7: 035003. PMID 32821772 DOI: 10.1117/1.Nph.7.3.035003  0.327
2020 Schroeder AB, Karim A, Ocotl E, Dones JM, Chacko JV, Liu A, Raines RT, Gibson ALF, Eliceiri KW. Optical imaging of collagen fiber damage to assess thermally injured human skin. Wound Repair and Regeneration : Official Publication of the Wound Healing Society [and] the European Tissue Repair Society. PMID 32715561 DOI: 10.1111/Wrr.12849  0.3
2020 Liu Y, Keikhosravi A, Pehlke CA, Bredfeldt JS, Dutson M, Liu H, Mehta GS, Claus R, Patel AJ, Conklin MW, Inman DR, Provenzano PP, Sifakis E, Patel JM, Eliceiri KW. Fibrillar Collagen Quantification With Curvelet Transform Based Computational Methods. Frontiers in Bioengineering and Biotechnology. 8: 198. PMID 32373594 DOI: 10.3389/Fbioe.2020.00198  0.337
2020 Pinkert MA, Cox BL, Dai B, Hall TJ, Eliceiri KW. 3-D-Printed Registration Phantom for Combined Ultrasound and Optical Imaging of Biological Tissues. Ultrasound in Medicine & Biology. PMID 32340797 DOI: 10.1016/J.Ultrasmedbio.2020.03.010  0.368
2020 Fanous M, Keikhosravi A, Kajdacsy-Balla A, Eliceiri KW, Popescu G. Quantitative phase imaging of stromal prognostic markers in pancreatic ductal adenocarcinoma. Biomedical Optics Express. 11: 1354-1364. PMID 32206415 DOI: 10.1364/Boe.383242  0.337
2020 Keikhosravi A, Li B, Liu Y, Eliceiri KW. Intensity-based registration of bright-field and second-harmonic generation images of histopathology tissue sections. Biomedical Optics Express. 11: 160-173. PMID 32010507 DOI: 10.1364/Boe.11.000160  0.374
2020 Albano NJ, Zeng W, Dingle AM, Lin C, Uselmann A, Eliceiri K, Bentz ML, Poore S. Abstract 18: Augmentation of the Wisconsin “Blue-Blood” Chicken Thigh Model with Fluorescent Imaging Enhances the Assessment of Anastomotic Patency in Supermicrosurgical Training Plastic and Reconstructive Surgery. Global Open. 8: 10-11. DOI: 10.1097/01.Gox.0000672584.69822.20  0.309
2019 Mukherjee L, Bui HD, Keikhosravi A, Loeffler A, Eliceiri K. Super-resolution recurrent convolutional neural networks for learning with multi-resolution whole slide images. Journal of Biomedical Optics. 24: 1-15. PMID 31837128 DOI: 10.1117/1.Jbo.24.12.126003  0.337
2019 Sagar MAK, Dai B, Chacko J, Weber J, Velten A, Sanders S, White J, Eliceiri K. Optical fiber-based dispersion for spectral discrimination in fluorescence lifetime imaging systems. Journal of Biomedical Optics. 25: 1-17. PMID 31833280 DOI: 10.1117/1.Jbo.25.1.014506  0.322
2019 Wang S, Chacko JV, Sagar AK, Eliceiri KW, Yuan M. Nonparametric empirical Bayesian framework for fluorescence-lifetime imaging microscopy. Biomedical Optics Express. 10: 5497-5517. PMID 31799027 DOI: 10.1364/Boe.10.005497  0.747
2019 Delaine-Smith R, Wright N, Hanley C, Hanwell R, Bhome R, Bullock M, Drifka C, Eliceiri K, Thomas G, Knight M, Mirnezami A, Peake N. Transglutaminase-2 Mediates the Biomechanical Properties of the Colorectal Cancer Tissue Microenvironment that Contribute to Disease Progression. Cancers. 11. PMID 31117256 DOI: 10.3390/Cancers11050701  0.325
2019 Ghanbari L, Carter RE, Rynes ML, Dominguez J, Chen G, Naik A, Hu J, Sagar MAK, Haltom L, Mossazghi N, Gray MM, West SL, Eliceiri KW, Ebner TJ, Kodandaramaiah SB. Cortex-wide neural interfacing via transparent polymer skulls. Nature Communications. 10: 1500. PMID 30940809 DOI: 10.1038/S41467-019-09488-0  0.303
2019 Cox BL, Erickson-Bhatt S, Szulczewski JM, Squirrell JM, Ludwig KD, Macdonald EB, Swader R, Ponik SM, Eliceiri KW, Fain SB. A novel bioreactor for combined magnetic resonance spectroscopy and optical imaging of metabolism in 3D cell cultures. Magnetic Resonance in Medicine. PMID 30652350 DOI: 10.1002/Mrm.27644  0.362
2019 Devine EE, Liu Y, Keikhosravi A, Eliceiri KW, Jiang JJ. Quantitative second harmonic generation imaging of leporine, canine, and porcine vocal fold collagen. The Laryngoscope. PMID 30628080 DOI: 10.1002/Lary.27782  0.311
2019 Chacko JV, Eliceiri KW. Autofluorescence lifetime imaging of cellular metabolism: Sensitivity toward cell density, pH, intracellular, and intercellular heterogeneity. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 95: 56-69. PMID 30296355 DOI: 10.1002/Cyto.A.23603  0.408
2019 Lee J, Chacko JV, Dai B, Reza SA, Sagar AK, Eliceiri KW, Velten A, Gupta M. Coding Scheme Optimization for Fast Fluorescence Lifetime Imaging Acm Transactions On Graphics. 38: 1-16. DOI: 10.1145/3325136  0.734
2019 Rueden CT, Eliceiri KW. ImageJ for the Next Generation of Scientific Image Data Microscopy and Microanalysis. 25: 142-143. DOI: 10.1017/S1431927619001442  0.334
2018 Mukherjee L, Keikhosravi A, Bui D, Eliceiri KW. Convolutional neural networks for whole slide image superresolution. Biomedical Optics Express. 9: 5368-5386. PMID 30460134 DOI: 10.1364/Boe.9.005368  0.363
2018 Hutson HN, Kujawa C, Eliceiri K, Campagnola P, Masters KS. Impact of tissue preservation on collagen fiber architecture. Biotechnic & Histochemistry : Official Publication of the Biological Stain Commission. 94: 134-144. PMID 30354688 DOI: 10.1080/10520295.2018.1530373  0.312
2018 Pinkert MA, Hortensius RA, Ogle BM, Eliceiri KW. Imaging the Cardiac Extracellular Matrix. Advances in Experimental Medicine and Biology. 1098: 21-44. PMID 30238364 DOI: 10.1007/978-3-319-97421-7_2  0.35
2018 Tomko LA, Hill RC, Barrett A, Szulczewski JM, Conklin MW, Eliceiri KW, Keely PJ, Hansen KC, Ponik SM. Targeted matrisome analysis identifies thrombospondin-2 and tenascin-C in aligned collagen stroma from invasive breast carcinoma. Scientific Reports. 8: 12941. PMID 30154546 DOI: 10.1038/S41598-018-31126-W  0.32
2018 Chanoca A, Burkel B, Grotewold E, Eliceiri KW, Otegui MS. Imaging Vacuolar Anthocyanins with Fluorescence Lifetime Microscopy (FLIM). Methods in Molecular Biology (Clifton, N.J.). 1789: 131-141. PMID 29916076 DOI: 10.1007/978-1-4939-7856-4_10  0.311
2018 Martin SA, Souder DC, Miller KN, Clark JP, Sagar AK, Eliceiri KW, Puglielli L, Beasley TM, Anderson RM. GSK3β Regulates Brain Energy Metabolism. Cell Reports. 23: 1922-1931.e4. PMID 29768193 DOI: 10.1016/J.Celrep.2018.04.045  0.726
2018 Pinkert MA, Salkowski LR, Keely PJ, Hall TJ, Block WF, Eliceiri KW. Review of quantitative multiscale imaging of breast cancer. Journal of Medical Imaging (Bellingham, Wash.). 5: 010901. PMID 29392158 DOI: 10.1117/1.Jmi.5.1.010901  0.344
2017 Huemer K, Squirrell JM, Swader R, Pelkey K, LeBert DC, Huttenlocher A, Eliceiri KW. Long-term Live Imaging Device for Improved Experimental Manipulation of Zebrafish Larvae. Journal of Visualized Experiments : Jove. PMID 29155730 DOI: 10.3791/56340  0.339
2017 Wang S, Arena ET, Eliceiri KW, Yuan M. Automated and Robust Quantification of Colocalization in Dual-Color Fluorescence Microscopy: A Nonparametric Statistical Approach. Ieee Transactions On Image Processing : a Publication of the Ieee Signal Processing Society. 1. PMID 29053465 DOI: 10.1109/Tip.2017.2763821  0.306
2017 Wegner KA, Keikhosravi A, Eliceiri KW, Vezina CM. Fluorescence of Picrosirius Red Multiplexed With Immunohistochemistry for the Quantitative Assessment of Collagen in Tissue Sections. The Journal of Histochemistry and Cytochemistry : Official Journal of the Histochemistry Society. 22155417718541. PMID 28692327 DOI: 10.1369/0022155417718541  0.394
2017 Lee TJ, Lee JW, Haynes EM, Eliceiri KW, Halloran MC. The Kinesin Adaptor Calsyntenin-1 Organizes Microtubule Polarity and Regulates Dynamics during Sensory Axon Arbor Development. Frontiers in Cellular Neuroscience. 11: 107. PMID 28473757 DOI: 10.3389/Fncel.2017.00107  0.538
2017 Zhang RR, Schroeder AB, Grudzinski JJ, Rosenthal EL, Warram JM, Pinchuk AN, Eliceiri KW, Kuo JS, Weichert JP. Beyond the margins: real-time detection of cancer using targeted fluorophores. Nature Reviews. Clinical Oncology. PMID 28094261 DOI: 10.1038/Nrclinonc.2016.212  0.357
2017 Ajeti V, Patankar M, Eliceiri K, Campagnola PJ. Abstract TMEM-015: QUANTITATIVE ASSESSMENT OF THE ROLE OF COLLAGEN ALTERATIONS IN OVARIAN CANCER Clinical Cancer Research. 23. DOI: 10.1158/1557-3265.Ovcasymp16-Tmem-015  0.375
2017 Campagnola PJ, Tilbury KB, Campbell KR, Eliceiri KW, Patankar M. Wavelength dependent SHG imaging and scattering probes of extracellular matrix (ECM) alterations in ovarian cancer (Conference Presentation) Proceedings of Spie. 10043: 1004302. DOI: 10.1117/12.2254834  0.335
2016 Arena ET, Rueden CT, Hiner MC, Wang S, Yuan M, Eliceiri KW. Quantitating the cell: turning images into numbers with ImageJ. Wiley Interdisciplinary Reviews. Developmental Biology. PMID 27911038 DOI: 10.1002/Wdev.260  0.368
2016 Drifka CR, Loeffler AG, Esquibel CR, Weber SM, Eliceiri KW, Kao WJ. Human pancreatic stellate cells modulate 3D collagen alignment to promote the migration of pancreatic ductal adenocarcinoma cells. Biomedical Microdevices. 18: 105. PMID 27819128 DOI: 10.1007/S10544-016-0128-1  0.33
2016 Wen B, Campbell KR, Tilbury K, Nadiarnykh O, Brewer MA, Patankar M, Singh V, Eliceiri KW, Campagnola PJ. 3D texture analysis for classification of second harmonic generation images of human ovarian cancer. Scientific Reports. 6: 35734. PMID 27767180 DOI: 10.1038/Srep35734  0.327
2016 Hutson HN, Marohl T, Anderson M, Eliceiri K, Campagnola P, Masters KS. Calcific Aortic Valve Disease Is Associated with Layer-Specific Alterations in Collagen Architecture. Plos One. 11: e0163858. PMID 27685946 DOI: 10.1371/Journal.Pone.0163858  0.304
2016 Chanoca A, Burkel B, Kovinich N, Grotewold E, Eliceiri KW, Otegui MS. Using Fluorescence Lifetime Microscopy to Study the Subcellular Localization of Anthocyanins. The Plant Journal : For Cell and Molecular Biology. PMID 27500780 DOI: 10.1111/Tpj.13297  0.307
2016 Szulczewski JM, Inman DR, Entenberg D, Ponik SM, Aguirre-Ghiso J, Castracane J, Condeelis J, Eliceiri KW, Keely PJ. In Vivo Visualization of Stromal Macrophages via label-free FLIM-based metabolite imaging. Scientific Reports. 6: 25086. PMID 27220760 DOI: 10.1038/Srep25086  0.363
2016 Burkel B, Morris BA, Ponik SM, Riching KM, Eliceiri KW, Keely PJ. Preparation of 3D Collagen Gels and Microchannels for the Study of 3D Interactions In Vivo. Journal of Visualized Experiments : Jove. PMID 27213771 DOI: 10.3791/53989  0.341
2016 Campos D, Peeters W, Nickel K, Burkel B, Bussink J, Kimple RJ, van der Kogel A, Eliceiri KW, Kissick MW. Radiation Promptly Alters Cancer Live Cell Metabolic Fluxes: An In Vitro Demonstration. Radiation Research. 185: 496-504. PMID 27128739 DOI: 10.1667/Rr14093.1  0.328
2016 Ponomareva OY, Eliceiri KW, Halloran MC. Charcot-Marie-Tooth 2b associated Rab7 mutations cause axon growth and guidance defects during vertebrate sensory neuron development. Neural Development. 11: 2. PMID 26791407 DOI: 10.1186/S13064-016-0058-X  0.535
2016 Mysore A, Velten A, Eliceiri KW. Sonification of hyperspectral fluorescence microscopy datasets F1000research. 5: 2572. DOI: 10.12688/F1000Research.9233.1  0.331
2016 Fluegen G, Avivar-Valderas A, Wang Y, Padgen MR, Williams JK, Verkhusha VV, Entenberg D, Eliceiri KW, Castracane J, Keely PJ, Condeelis JS, Aguirre-Ghiso JA. Abstract 4394: Phenotypic heterogeneity of disseminated tumor cells is predetermined by primary tumor hypoxic microenvironments Cancer Research. 76: 4394-4394. DOI: 10.1158/1538-7445.Am2016-4394  0.301
2016 Campagnola PJ, Ajeti V, Lara J, Eliceiri KW, Patankar M. Modeling extracellular matrix (ECM) alterations in ovarian cancer by multiphoton excited fabrication of stromal models(Conference Presentation) Proceedings of Spie. 9711: 971106. DOI: 10.1117/12.2211070  0.364
2016 Rueden CT, Hiner MC, Eliceiri KW. ImageJ: Image Analysis Interoperability for the Next Generation of Biological Image Data Microscopy and Microanalysis. 22: 2066-2067. DOI: 10.1017/S143192761601117X  0.348
2016 LeBert DC, Squirrell JM, Huttenlocher A, Eliceiri KW. Second harmonic generation microscopy in zebrafish Methods in Cell Biology. 133: 55-68. DOI: 10.1016/Bs.Mcb.2016.01.005  0.388
2015 Buttafava M, Zeman J, Tosi A, Eliceiri K, Velten A. Non-line-of-sight imaging using a time-gated single photon avalanche diode. Optics Express. 23: 20997-1011. PMID 26367952 DOI: 10.1364/Oe.23.020997  0.311
2015 Wen B, Campbell KR, Cox BL, Eliceiri KW, Superfine R, Campagnola PJ. Multi-view second-harmonic generation imaging of mouse tail tendon via reflective micro-prisms. Optics Letters. 40: 3201-4. PMID 26125402 DOI: 10.1364/Ol.40.003201  0.365
2015 Tung JC, Barnes JM, Desai SR, Sistrunk C, Conklin MW, Schedin P, Eliceiri KW, Keely PJ, Seewaldt VL, Weaver VM. Tumor mechanics and metabolic dysfunction. Free Radical Biology & Medicine. 79: 269-80. PMID 25532934 DOI: 10.1016/J.Freeradbiomed.2014.11.020  0.312
2015 Burkel B, Ponik S, Morris B, Eliceiri K, Keely P. Abstract B02: Matrix stiffness regulates local metabolism of breast carcinoma cells Cancer Research. 75. DOI: 10.1158/1538-7445.Chtme14-B02  0.347
2015 Morris BA, Burkel B, Ponik S, Eliceiri K, Aguirre-Ghiso J, Condeelis J, Castracane J, Keely PJ. Abstract 332: Extracellular matrix stiffness regulates metabolic state in metastatic, but not quiescent, breast carcinoma cells Cancer Research. 75: 332-332. DOI: 10.1158/1538-7445.Am2015-332  0.352
2014 Riching KM, Cox BL, Salick MR, Pehlke C, Riching AS, Ponik SM, Bass BR, Crone WC, Jiang Y, Weaver AM, Eliceiri KW, Keely PJ. 3D collagen alignment limits protrusions to enhance breast cancer cell persistence. Biophysical Journal. 107: 2546-58. PMID 25468334 DOI: 10.1016/J.Bpj.2014.10.035  0.317
2014 Ponomareva OY, Holmen IC, Sperry AJ, Eliceiri KW, Halloran MC. Calsyntenin-1 regulates axon branching and endosomal trafficking during sensory neuron development in vivo. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 34: 9235-48. PMID 25009257 DOI: 10.1523/Jneurosci.0561-14.2014  0.544
2014 Keikhosravi A, Bredfeldt JS, Sagar AK, Eliceiri KW. Second-harmonic generation imaging of cancer. Methods in Cell Biology. 123: 531-46. PMID 24974046 DOI: 10.1016/B978-0-12-420138-5.00028-8  0.76
2014 Esbona K, Inman D, Saha S, Eliceiri K, Wilke LG, Keely PJ. Abstract 1116: Response to cyclooxygenase-2 inhibition is regulated by collagen dense stroma Cancer Research. 74: 1116-1116. DOI: 10.1158/1538-7445.Am2014-1116  0.307
2014 Trentham-Dietz A, Sprague B, Conklin M, Hampton J, Gangnon R, Eliceiri K, Newcomb P, Friedl A, Kelly P. Collagen Fiber Alignment in Relation to Prognostic Markers for Ductal Carcinoma In Situ of the Breast Cancer Epidemiology Biomarkers & Prevention. 23: 565-565. DOI: 10.1158/1055-9965.Epi-14-0070  0.321
2014 Bredfeldt J, Liu Y, Conklin M, Keely P, Eliceiri K, Mackie T. SU-E-J-107: Supervised Learning Model of Aligned Collagen for Human Breast Carcinoma Prognosis Medical Physics. 41: 180-180. DOI: 10.1118/1.4888159  0.37
2014 Pointer KB, Eliceiri KW, Clark PA, Kuo JS. Bi-24Collagen Plays A Role In Glioblastoma Tumor Invasion And Patient Survival. Neuro-Oncology. 16. DOI: 10.1093/Neuonc/Nou239.24  0.312
2013 Bredfeldt J, Liu Y, Wilke L, Keely P, Mackie T, Eliceiri K. MO-D-141-08: Multi-Scale Analysis of Collagen Architecture for Classifying Tumor and Healthy Breast Tissue Images. Medical Physics. 40: 400-401. PMID 28518438 DOI: 10.1118/1.4815255  0.323
2013 Hall G, Eliceiri KW, Campagnola PJ. Simultaneous determination of the second-harmonic generation emission directionality and reduced scattering coefficient from three-dimensional imaging of thick tissues. Journal of Biomedical Optics. 18: 116008. PMID 24220726 DOI: 10.1117/1.Jbo.18.11.116008  0.338
2013 Ajeti V, Lien CH, Chen SJ, Su PJ, Squirrell JM, Molinarolo KH, Lyons GE, Eliceiri KW, Ogle BM, Campagnola PJ. Image-inspired 3D multiphoton excited fabrication of extracellular matrix structures by modulated raster scanning. Optics Express. 21: 25346-55. PMID 24150376 DOI: 10.1364/Oe.21.025346  0.401
2013 Drifka CR, Eliceiri KW, Weber SM, Kao WJ. A bioengineered heterotypic stroma-cancer microenvironment model to study pancreatic ductal adenocarcinoma. Lab On a Chip. 13: 3965-75. PMID 23959166 DOI: 10.1039/C3Lc50487E  0.344
2013 Buschke DG, Vivekanandan A, Squirrell JM, Rueden CT, Eliceiri KW, Ogle BM. Large particle multiphoton flow cytometry to purify intact embryoid bodies exhibiting enhanced potential for cardiomyocyte differentiation. Integrative Biology : Quantitative Biosciences From Nano to Macro. 5: 993-1003. PMID 23759950 DOI: 10.1039/C3Ib20286K  0.317
2013 Barcus CE, Keely PJ, Eliceiri KW, Schuler LA. Stiff collagen matrices increase tumorigenic prolactin signaling in breast cancer cells. The Journal of Biological Chemistry. 288: 12722-32. PMID 23530035 DOI: 10.1074/Jbc.M112.447631  0.303
2013 Reusch LM, Feltovich H, Carlson LC, Hall G, Campagnola PJ, Eliceiri KW, Hall TJ. Nonlinear optical microscopy and ultrasound imaging of human cervical structure. Journal of Biomedical Optics. 18: 031110. PMID 23412434 DOI: 10.1117/1.Jbo.18.3.031110  0.356
2013 Sung KE, Pehlke C, Berthier E, Eliceiri KW, Friedl A, Beebe DJ. Abstract B17: A microscale 3-D in vitro model of the breast cancer progression from DCIS to IDC: Deciphering the role of the stromal fibroblasts Cancer Research. 73. DOI: 10.1158/1538-7445.Tim2013-B17  0.311
2013 Esbona K, Inman DR, Eliceiri KW, Wilke LG, Keely PJ. Abstract 4960: COX-2 inhibition with celecoxib delays the progression of invasive mammary carcinoma in a murine model of collagen dense stroma. Cancer Research. 73: 4960-4960. DOI: 10.1158/1538-7445.Am2013-4960  0.31
2013 Zahm CD, Szulczewski J, Olson TJP, Nettekoven L, Leystra A, Albrecht DM, Clipson L, Eliceiri KW, Newton MA, Halberg RB. Abstract 2717: The clonal architecture of tumors in the mammalian intestines. Cancer Research. 73: 2717-2717. DOI: 10.1158/1538-7445.Am2013-2717  0.3
2013 Trentham-Dietz A, Conklin M, Gangnon R, Sprague B, Eliceiri K, Bredfeldt J, Surachaicharn N, Campagnola P, Friedl A, Newcomb P, Keely P. Abstract P1-06-06: Alteration of stromal collagen fiber orientation in DCIS Cancer Research. 73. DOI: 10.1158/0008-5472.Sabcs13-P1-06-06  0.307
2013 Esbona K, Inman D, Eliceiri K, Wilke L, Keely P. Abstract P1-06-02: Inflammatory stromal cell response induced by collagen dense stroma is regulated by cyclooxygenase-2 in a mouse breast cancer model Cancer Research. 73. DOI: 10.1158/0008-5472.Sabcs13-P1-06-02  0.302
2013 Young P, Grislis A, Barber P, Keely P, Eliceiri K. Data Processing for Time-Domain Fluorescence Lifetime Imaging Microscopy Microscopy and Microanalysis. 19: 758-759. DOI: 10.1017/S1431927613005783  0.334
2012 Young PA, Nazir M, Szulczewski MJ, Keely PJ, Eliceiri KW. Second-harmonic generation and fluorescence lifetime imaging microscopy through a rodent mammary imaging window Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8226. DOI: 10.1117/12.906409  0.404
2012 Eliceiri KW, Berthold MR, Goldberg IG, Ibáñez L, Manjunath BS, Martone ME, Murphy RF, Peng H, Plant AL, Roysam B, Stuurmann N, Swedlow JR, Tomancak P, Carpenter AE. Erratum: Corrigendum: Biological imaging software tools Nature Methods. 9: 1031-1031. DOI: 10.1038/Nmeth1012-1031B  0.315
2012 Nasse MJ, Bellehumeur B, Ratti S, Olivieri C, Buschke D, Squirrell J, Eliceiri K, Ogle B, Patterson CS, Giordano M, Hirschmugl CJ. Opportunities for multiple-beam synchrotron-based mid-infrared imaging at IRENI Vibrational Spectroscopy. 60: 10-15. DOI: 10.1016/J.Vibspec.2011.11.016  0.306
2011 Chamberlain CS, Crowley EM, Kobayashi H, Eliceiri KW, Vanderby R. Quantification of collagen organization and extracellular matrix factors within the healing ligament. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 17: 779-87. PMID 21910939 DOI: 10.1017/S1431927611011925  0.309
2011 Ajeti V, Nadiarnykh O, Ponik SM, Keely PJ, Eliceiri KW, Campagnola PJ. Structural changes in mixed Col I/Col V collagen gels probed by SHG microscopy: implications for probing stromal alterations in human breast cancer. Biomedical Optics Express. 2: 2307-16. PMID 21833367 DOI: 10.1364/Boe.2.002307  0.305
2011 Buschke DG, Squirrell JM, Ansari H, Smith MA, Rueden CT, Williams JC, Lyons GE, Kamp TJ, Eliceiri KW, Ogle BM. Multiphoton flow cytometry to assess intrinsic and extrinsic fluorescence in cellular aggregates: applications to stem cells. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 17: 540-54. PMID 20684798 DOI: 10.1017/S1431927610000280  0.327
2011 Conklin MW, Eickhoff J, Riching K, Pehlke C, Eliceiri K, Provenzano P, Friedl A, Keely PJ. Abstract A35: Aligned collagen is a prognostic signature for survival in human breast carcinoma Cancer Research. 73: 4749-4749. DOI: 10.1158/1538-7445.Tim2013-A35  0.322
2010 Lin HP, Vincenz C, Eliceiri KW, Kerppola TK, Ogle BM. Bimolecular fluorescence complementation analysis of eukaryotic fusion products. Biology of the Cell / Under the Auspices of the European Cell Biology Organization. 102: 525-37. PMID 20590528 DOI: 10.1042/Bc20100033  0.305
2010 Provenzano PP, Eliceiri KW, Inman DR, Keely PJ. Engineering three-dimensional collagen matrices to provide contact guidance during 3D cell migration. Current Protocols in Cell Biology / Editorial Board, Juan S. Bonifacino ... [Et Al.]. Unit 10.17. PMID 20521230 DOI: 10.1002/0471143030.Cb1017S47  0.311
2010 Gill EM, Straseski JA, Rasmussen CA, Liliensiek SJ, Eliceiri KW, Ramanujam N, White JG, Allen-Hoffmann BL. Visualization of morphological and molecular features associated with chronic ischemia in bioengineered human skin. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 16: 117-31. PMID 20199713 DOI: 10.1017/S1431927610000103  0.318
2009 Swedlow JR, Goldberg IG, Eliceiri KW. Bioimage informatics for experimental biology Annual Review of Biophysics. 38: 327-346. PMID 19416072 DOI: 10.1146/Annurev.Biophys.050708.133641  0.301
2009 Conklin MW, Provenzano PP, Eliceiri KW, Sullivan R, Keely PJ. Fluorescence lifetime imaging of endogenous fluorophores in histopathology sections reveals differences between normal and tumor epithelium in carcinoma in situ of the breast. Cell Biochemistry and Biophysics. 53: 145-57. PMID 19259625 DOI: 10.1007/S12013-009-9046-7  0.354
2009 Dougherty MT, Folk MJ, Zadok E, Bernstein HJ, Bernstein FC, Eliceiri KW, Benger W, Best C. Unifying Biological Image Formats with HDF5 Queue. 7: 20-25. DOI: 10.1145/1626135.1628215  0.336
2008 Provenzano PP, Eliceiri KW, Yan L, Ada-Nguema A, Conklin MW, Inman DR, Keely PJ. Nonlinear optical imaging of cellular processes in breast cancer. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 14: 532-48. PMID 18986607 DOI: 10.1017/S1431927608080884  0.382
2008 Provenzano PP, Rueden CT, Trier SM, Yan L, Ponik SM, Inman DR, Keely PJ, Eliceiri KW. Nonlinear optical imaging and spectral-lifetime computational analysis of endogenous and exogenous fluorophores in breast cancer. Journal of Biomedical Optics. 13: 031220. PMID 18601544 DOI: 10.1117/1.2940365  0.403
2006 Yan L, Rueden CT, White JG, Eliceiri KW. Applications of combined spectral lifetime microscopy for biology. Biotechniques. 41: 249, 251, 253 passim. PMID 16989084 DOI: 10.2144/000112251  0.381
2006 Skala MC, Riching KM, Bird DK, Vrotsos KM, Gendron-Fitzpatrick A, Eliceiri KW, Ramanujam N. In vivo Multiphoton Fluorescence Lifetime Imaging of Free and Protein-Bound NADH in Normal and Pre-Cancerous Epithelia Biosilico. DOI: 10.1364/Bio.2006.Sg3  0.397
2005 Eliceiri KW, Rueden C. Tools for visualizing multidimensional images from living specimens Photochemistry and Photobiology. 81: 1116-1122. PMID 15807634 DOI: 10.1562/2004-11-22-Ir-377  0.353
2005 Stefansson HN, Eliceiri KW, Thomas CF, Ron A, DeVore R, Sharpley R, White JG. Wavelet compression of three-dimensional time-lapse biological image data. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 11: 9-17. PMID 15683567 DOI: 10.1017/S1431927605050014  0.309
2004 Eliceiri KW. Molecular Expressions: Exploring the world of optics and microscopy http://microscopy.fsu.edu Biology of the Cell. 96: 403-405. PMID 15325069 DOI: 10.1016/J.Biolcel.2004.03.007  0.329
2004 Rueden C, Eliceiri KW, White JG. VisBio: a computational tool for visualization of multidimensional biological image data. Traffic (Copenhagen, Denmark). 5: 411-7. PMID 15117315 DOI: 10.1111/J.1600-0854.2004.00189.X  0.347
2004 Skala MC, Vrotsos KM, Ramanujam N, Squirrell JM, Eliceiri KW, Gendron-Fitzpatrick A. Multiphoton imaging of endogenous fluorescence in neoplastic and non-neoplastic epithelial tissues Biosilico. DOI: 10.1364/Bio.2004.Sb7  0.366
2003 Wokosin DL, Squirrell JM, Eliceiri KW, White JG. Optical workstation with concurrent, independent multiphoton imaging and experimental laser microbeam capabilities. The Review of Scientific Instruments. 74: 193-201. PMID 18607511 DOI: 10.1063/1.1524716  0.321
2002 Eliceiri KW, Rueden C, Mohler WA, Hibbard WL, White JG. Analysis of multidimensional biological image data Biotechniques. 33: 1268-1273. PMID 12503311 DOI: 10.2144/02336Bt01  0.351
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