Veerabhadran Baladandayuthapani, Ph.D. - Publications

Affiliations: 
2005 Texas A & M University, College Station, TX, United States 
Area:
Statistics, Bioinformatics Biology, Oncology

73/176 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Olivares RJ, Rao A, Morris JS, Baladandayuthapani V. Integrative Analysis of Multi-modal Correlated Imaging-Genomics Data in Glioblastoma. Ieee International Workshop On Genomic Signal Processing and Statistics : [Proceedings]. Ieee International Workshop On Genomic Signal Processing and Statistics. 2013: 5-8. PMID 37016714 DOI: 10.1109/GENSIPS.2013.6735914  0.551
2022 Desai N, Morris J, Baladandayuthapani V. NETCELLMATCH: MULTISCALE NETWORK-BASED MATCHING OF CANCER CELL LINES TO PATIENTS USING GRAPHICAL WAVELETS. Chemistry & Biodiversity. PMID 36279370 DOI: 10.1002/cbdv.202200746  0.489
2020 Yang H, Baladandayuthapani V, Rao AUK, Morris JS. Quantile Function on Scalar Regression Analysis for Distributional Data. Journal of the American Statistical Association. 115: 90-106. PMID 32981991 DOI: 10.1080/01621459.2019.1609969  0.526
2020 Gates EDH, Lin JS, Weinberg JS, Prabhu SS, Hamilton J, Hazle JD, Fuller GN, Baladandayuthapani V, Fuentes DT, Schellingerhout D. Imaging-Based Algorithm for the Local Grading of Glioma. Ajnr. American Journal of Neuroradiology. PMID 32029466 DOI: 10.3174/Ajnr.A6405  0.314
2020 Ha MJ, Stingo FC, Baladandayuthapani V. Bayesian Structure Learning in Multilayered Genomic Networks Journal of the American Statistical Association. 1-14. DOI: 10.1080/01621459.2020.1775611  0.333
2019 Zhang Y, Morris JS, Aerry SN, Rao AUK, Baladandayuthapani V. RADIO-IBAG: RADIOMICS-BASED INTEGRATIVE BAYESIAN ANALYSIS OF MULTIPLATFORM GENOMIC DATA. The Annals of Applied Statistics. 13: 1957-1988. PMID 33224404 DOI: 10.1214/19-aoas1238  0.544
2019 Das P, Peterson CB, Do KA, Akbani R, Baladandayuthapani V. NExUS: Bayesian simultaneous network estimation across unequal sample sizes. Bioinformatics (Oxford, England). PMID 31504175 DOI: 10.1093/Bioinformatics/Btz636  0.314
2019 Maity AK, Bhattacharya A, Mallick BK, Baladandayuthapani V. Bayesian Data Integration and Variable Selection for Pan-Cancer Survival Prediction using Protein Expression Data. Biometrics. PMID 31393003 DOI: 10.1111/Biom.13132  0.601
2019 Lee W, Miranda MF, Rausch P, Baladandayuthapani V, Fazio M, Downs JC, Morris JS. Bayesian Semiparametric Functional Mixed Models for Serially Correlated Functional Data, with Application to Glaucoma Data. Journal of the American Statistical Association. 114: 495-513. PMID 31235987 DOI: 10.1080/01621459.2018.1476242  0.522
2019 Ni Y, Stingo FC, Ha MJ, Akbani R, Baladandayuthapani V. Bayesian Hierarchical Varying-sparsity Regression Models with Application to Cancer Proteogenomics. Journal of the American Statistical Association. 114: 48-60. PMID 31178611 DOI: 10.1080/01621459.2018.1434529  0.397
2019 Zhang Y, Morris JS, Aerry SN, Rao AUK, Baladandayuthapani V. Radio-iBAG: Radiomics-based integrative Bayesian analysis of multiplatform genomic data The Annals of Applied Statistics. 13: 1957-1988. DOI: 10.1214/19-Aoas1238  0.554
2019 Yang H, Baladandayuthapani V, Rao AU, Morris JS. Quantile Function on Scalar Regression Analysis for Distributional Data Journal of the American Statistical Association. 115: 90-106. DOI: 10.1080/01621459.2019.1609969  0.351
2018 Bharath K, Kurtek S, Rao A, Baladandayuthapani V. Radiologic image-based statistical shape analysis of brain tumours. Journal of the Royal Statistical Society. Series C, Applied Statistics. 67: 1357-1378. PMID 30420787 DOI: 10.1111/Rssc.12272  0.365
2018 Ha MJ, Banerjee S, Akbani R, Liang H, Mills GB, Do KA, Baladandayuthapani V. Personalized Integrated Network Modeling of the Cancer Proteome Atlas. Scientific Reports. 8: 14924. PMID 30297783 DOI: 10.1038/S41598-018-32682-X  0.392
2018 Elhalawani H, Lin TA, Volpe S, Mohamed ASR, White AL, Zafereo J, Wong AJ, Berends JE, AboHashem S, Williams B, Aymard JM, Kanwar A, Perni S, Rock CD, Cooksey L, ... ... Baladandayuthapani V, et al. Machine Learning Applications in Head and Neck Radiation Oncology: Lessons From Open-Source Radiomics Challenges. Frontiers in Oncology. 8: 294. PMID 30175071 DOI: 10.3389/Fonc.2018.00294  0.551
2018 Kundu S, Cheng Y, Shin M, Manyam G, Mallick BK, Baladandayuthapani V. Bayesian variable selection with graphical structure learning: Applications in integrative genomics. Plos One. 13: e0195070. PMID 30059495 DOI: 10.1371/Journal.Pone.0195070  0.455
2018 Davenport CA, Maity A, Baladandayuthapani V. Functional interaction-based nonlinear models with application to multiplatform genomics data. Statistics in Medicine. PMID 29737021 DOI: 10.1002/Sim.7671  0.554
2018 Zhang X, Lee HC, Shirazi F, Baladandayuthapani V, Lin H, Kuiatse I, Wang H, Jones RJ, Berkova Z, Singh RK, Lu J, Qian Y, Raina K, Coleman KG, Crews CM, et al. Protein targeting chimeric molecules specific for bromodomain and extra-terminal motif family proteins are active against pre-clinical models of multiple myeloma. Leukemia. PMID 29581547 DOI: 10.1038/S41375-018-0044-X  0.316
2018 Ni Y, Stingo FC, Baladandayuthapani V. Bayesian Graphical Regression Journal of the American Statistical Association. 114: 184-197. DOI: 10.1080/01621459.2017.1389739  0.33
2017 Morris JS, Baladandayuthapani V. Rejoinder to statistical contributions to bioinformatics: Design, modelling, structure learning and Integration. Statistical Modelling. 17: 338-357. PMID 30034293 DOI: 10.1177/1471082X17728576  0.496
2017 Yu K, Zhang Y, Yu Y, Huang C, Liu R, Li T, Yang L, Morris JS, Baladandayuthapani V, Zhu H. Radiomic analysis in prediction of Human Papilloma Virus status. Clinical and Translational Radiation Oncology. 7: 49-54. PMID 29594229 DOI: 10.1016/J.Ctro.2017.10.001  0.499
2017 Wang H, Baladandayuthapani V, Wang Z, Lin H, Berkova Z, Davis RE, Yang L, Orlowski RZ. Truncated protein tyrosine phosphatase receptor type O suppresses AKT signaling through IQ motif containing GTPase activating protein 1 and confers sensitivity to bortezomib in multiple myeloma. Oncotarget. 8: 113858-113873. PMID 29371952 DOI: 10.18632/Oncotarget.23017  0.322
2017 Zhu B, Song N, Shen R, Arora A, Machiela MJ, Song L, Landi MT, Ghosh D, Chatterjee N, Baladandayuthapani V, Zhao H. Integrating Clinical and Multiple Omics Data for Prognostic Assessment across Human Cancers. Scientific Reports. 7: 16954. PMID 29209073 DOI: 10.1038/S41598-017-17031-8  0.354
2017 Class CA, Ha MJ, Baladandayuthapani V, Do KA. iDINGO - Integrative Differential Network Analysis in Genomics with Shiny Application. Bioinformatics (Oxford, England). PMID 29194470 DOI: 10.1093/Bioinformatics/Btx750  0.339
2017 Morris JS, Baladandayuthapani V. Statistical Contributions to Bioinformatics: Design, Modeling, Structure Learning, and Integration. Statistical Modelling. 17: 245-289. PMID 29129969 DOI: 10.1177/1471082X17698255  0.56
2017 Kim S, Baladandayuthapani V, Lee JJ. Prediction-Oriented Marker Selection (PROMISE): With Application to High-Dimensional Regression. Statistics in Biosciences. 9: 217-245. PMID 28785367 DOI: 10.1007/S12561-016-9169-5  0.316
2017 Bhadra A, Rao A, Baladandayuthapani V. Inferring network structure in non-normal and mixed discrete-continuous genomic data. Biometrics. PMID 28437848 DOI: 10.1111/Biom.12711  0.417
2017 Bharath K, Kambadur P, Dey DK, Rao A, Baladandayuthapani V. Statistical Tests for Large Tree-Structured Data Journal of the American Statistical Association. 112: 1733-1743. DOI: 10.1080/01621459.2016.1240081  0.346
2017 Ni Y, Stingo FC, Baladandayuthapani V. Sparse Multi-Dimensional Graphical Models: A Unified Bayesian Framework Journal of the American Statistical Association. 112: 779-793. DOI: 10.1080/01621459.2016.1167694  0.387
2017 Zhang Y, Linder MH, Shojaie A, Ouyang Z, Shen R, Baggerly KA, Baladandayuthapani V, Zhao H. Dissecting Pathway Disturbances Using Network Topology and Multi-platform Genomics Data Statistics in Biosciences. 10: 86-106. DOI: 10.1007/S12561-017-9193-0  0.373
2016 Zhang L, Baladandayuthapani V, Zhu H, Baggerly KA, Majewski T, Czerniak BA, Morris JS. Functional CAR models for large spatially correlated functional datasets. Journal of the American Statistical Association. 111: 772-786. PMID 28018013 DOI: 10.1080/01621459.2015.1042581  0.529
2016 Saha A, Banerjee S, Kurtek S, Narang S, Lee J, Rao G, Martinez J, Bharath K, Rao AU, Baladandayuthapani V. DEMARCATE: Density-based magnetic resonance image clustering for assessing tumor heterogeneity in cancer. Neuroimage. Clinical. 12: 132-43. PMID 27408798 DOI: 10.1016/J.Nicl.2016.05.012  0.334
2016 Zoh RS, Mallick B, Ivanov I, Baladandayuthapani V, Manyam G, Chapkin RS, Lampe JW, Carroll RJ. PCAN: Probabilistic correlation analysis of two non-normal data sets. Biometrics. PMID 27037601 DOI: 10.1111/Biom.12516  0.528
2016 Guha S, Baladandayuthapani V. A nonparametric Bayesian technique for high-dimensional regression Electronic Journal of Statistics. 10: 3374-3424. DOI: 10.1214/16-Ejs1184  0.335
2015 Azadeh S, Hobbs BP, Ma L, Nielsen DA, Moeller FG, Baladandayuthapani V. Integrative Bayesian Analysis of Neuroimaging-Genetic Data with Application to Cocaine Dependence. Neuroimage. PMID 26484829 DOI: 10.1016/J.Neuroimage.2015.10.033  0.337
2015 Gregory KB, Carroll RJ, Baladandayuthapani V, Lahiri SN. A Two-Sample Test for Equality of Means in High Dimension. Journal of the American Statistical Association. 110: 837-849. PMID 26279594 DOI: 10.1080/01621459.2014.934826  0.475
2015 Ha MJ, Baladandayuthapani V, Do KA. DINGO: differential network analysis in genomics. Bioinformatics (Oxford, England). 31: 3413-20. PMID 26148744 DOI: 10.1093/Bioinformatics/Btv406  0.326
2015 Dai B, Yan S, Lara-Guerra H, Kawashima H, Sakai R, Jayachandran G, Majidi M, Mehran R, Wang J, Bekele BN, Baladandayuthapani V, Yoo SY, Wang Y, Ying J, Meng F, et al. Exogenous Restoration of TUSC2 Expression Induces Responsiveness to Erlotinib in Wildtype Epidermal Growth Factor Receptor (EGFR) Lung Cancer Cells through Context Specific Pathways Resulting in Enhanced Therapeutic Efficacy. Plos One. 10: e0123967. PMID 26053020 DOI: 10.1371/Journal.Pone.0123967  0.305
2015 Ha MJ, Baladandayuthapani V, Do KA. Prognostic gene signature identification using causal structure learning: applications in kidney cancer. Cancer Informatics. 14: 23-35. PMID 25861215 DOI: 10.4137/Cin.S14873  0.359
2015 Ni Y, Stingo FC, Baladandayuthapani V. Bayesian nonlinear model selection for gene regulatory networks. Biometrics. 71: 585-95. PMID 25854759 DOI: 10.1111/Biom.12309  0.331
2015 Gregory KB, Carroll RJ, Baladandayuthapani V, Lahiri SN. A Two-Sample Test for Equality of Means in High Dimension Journal of the American Statistical Association. 110: 837-849. DOI: 10.1080/01621459.2014.934826  0.327
2014 Baladandayuthapani V, Talluri R, Ji Y, Coombes KR, Lu Y, Hennessy BT, Davies MA, Mallick BK. BAYESIAN SPARSE GRAPHICAL MODELS FOR CLASSIFICATION WITH APPLICATION TO PROTEIN EXPRESSION DATA. The Annals of Applied Statistics. 8: 1443-1468. PMID 26246866 DOI: 10.1214/14-Aoas722  0.676
2014 Gregory KB, Momin AA, Coombes KR, Baladandayuthapani V. Latent Feature Decompositions for Integrative Analysis of Multi-Platform Genomic Data. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 11: 984-94. PMID 26146492 DOI: 10.1109/Tcbb.2014.2325035  0.427
2014 Zhang L, Baladandayuthapani V, Mallick BK, Manyam GC, Thompson PA, Bondy ML, Do KA. Bayesian hierarchical structured variable selection methods with application to MIP studies in breast cancer. Journal of the Royal Statistical Society. Series C, Applied Statistics. 63: 595-620. PMID 25705056 DOI: 10.1111/Rssc.12053  0.356
2014 Zhang L, Morris JS, Zhang J, Orlowski RZ, Baladandayuthapani V. Bayesian joint selection of genes and pathways: applications in multiple myeloma genomics. Cancer Informatics. 13: 113-23. PMID 25520554 DOI: 10.4137/Cin.S13787  0.548
2014 Guha S, Ji Y, Baladandayuthapani V. Bayesian disease classification using copy number data. Cancer Informatics. 13: 83-91. PMID 25336897 DOI: 10.4137/Cin.S13785  0.38
2014 Ni Y, Stingo FC, Baladandayuthapani V. Integrative bayesian network analysis of genomic data. Cancer Informatics. 13: 39-48. PMID 25288878 DOI: 10.4137/Cin.S13786  0.416
2014 Jiang H, An L, Baladandayuthapani V, Auer PL. Classification, predictive modelling, and statistical analysis of cancer data (a). Cancer Informatics. 13: 1-3. PMID 25288874 DOI: 10.4137/Cin.S19328  0.369
2014 Talluri R, Baladandayuthapani V, Mallick BK. Bayesian sparse graphical models and their mixtures. Stat. 3: 109-125. PMID 24948842 DOI: 10.1002/sta4.49  0.642
2014 Bailey AM, Zhan L, Maru D, Shureiqi I, Pickering CR, Kiriakova G, Izzo J, He N, Wei C, Baladandayuthapani V, Liang H, Kopetz S, Powis G, Guo GL. FXR silencing in human colon cancer by DNA methylation and KRAS signaling. American Journal of Physiology. Gastrointestinal and Liver Physiology. 306: G48-58. PMID 24177031 DOI: 10.1152/Ajpgi.00234.2013  0.313
2014 Baladandayuthapani V, Talluri R, Ji Y, Coombes KR, Lu Y, Hennessy BT, Davies MA, Mallick BK. Bayesian sparse graphical models for classification with application to protein expression data Annals of Applied Statistics. 8: 1443-1468. DOI: 10.1214/14-AOAS722  0.626
2014 Zhang X, Baladandayuthapani V, Lin HY, Mulligan G, Li B, Esseltine D, Qi L, Xu J, Hunziker W, Barlogie B, Usmani SZ, Zhang Q, Crowley J, Hoering A, Li B, et al. Studies of the Proteasome Inhibitor Sensitivity Modulator Tight Junction Protein 1 Highlight a Role for Signaling through the Epidermal Growth Factor Receptor in Determining Proteasome Capacity Blood. 124: 3414-3414. DOI: 10.1182/Blood.V124.21.3414.3414  0.308
2014 Wang H, Baladandayuthapani V, Lin HY, Wang X, Li B, Zhang X, Kuiatse I, Wang H, Gu D, Zhong L, Ma W, Davis RE, Orlowski RZ. Mucin 20 (MUC20) Modulates Proteasome Assembly Chaperones through the c-MET Pathway and Is a Biomarker of Proteasome Inhibitor Sensitivity in Myeloma Blood. 124: 274-274. DOI: 10.1182/Blood.V124.21.274.274  0.318
2013 Wang W, Baladandayuthapani V, Holmes CC, Do KA. Integrative network-based Bayesian analysis of diverse genomics data. Bmc Bioinformatics. 14: S8. PMID 24267288 DOI: 10.1186/1471-2105-14-S13-S8  0.372
2013 Jennings EM, Morris JS, Carroll RJ, Manyam GC, Baladandayuthapani V. Bayesian methods for expression-based integration of various types of genomics data. Eurasip Journal On Bioinformatics & Systems Biology. 2013: 13. PMID 24053265 DOI: 10.1186/1687-4153-2013-13  0.648
2013 Srivastava S, Wang W, Manyam G, Ordonez C, Baladandayuthapani V. Integrating multi-platform genomic data using hierarchical Bayesian relevance vector machines. Eurasip Journal On Bioinformatics & Systems Biology. 2013: 9. PMID 23809014 DOI: 10.1186/1687-4153-2013-9  0.398
2013 Wang W, Baladandayuthapani V, Morris JS, Broom BM, Manyam G, Do KA. iBAG: integrative Bayesian analysis of high-dimensional multiplatform genomics data. Bioinformatics (Oxford, England). 29: 149-59. PMID 23142963 DOI: 10.1093/Bioinformatics/Bts655  0.615
2013 Wang H, Baladandayuthapani V, Wang Z, Zhang J, Lin HY, Davis RE, Yang L, Orlowski RZ. Expression Of Truncated Protein Tyrosine Phosphatase, Receptor Type, O (PTPROt) Influences Multiple Myeloma Sensitivity To Bortezomib Through Akt Signaling, and Is a Favorable Clinical Prognostic Factor Blood. 122: 2520-2520. DOI: 10.1182/Blood.V122.21.2520.2520  0.358
2013 Zhang X, Baladandayuthapani V, Lin HY, Barlogie B, Usmani SZ, Yang L, Orlowski RZ. Identification Of Tight Junction Protein (TJP)-1 As a Modulator and Biomarker Of Proteasome Inhibitor Sensitivity In Multiple Myeloma Blood. 122: 123-123. DOI: 10.1182/Blood.V122.21.123.123  0.349
2013 Olivares RJ, Rao A, Rao G, Morris JS, Baladandayuthapani V. Integrative analysis of multi-modal correlated imaging-genomics data in glioblastoma Proceedings - Ieee International Workshop On Genomic Signal Processing and Statistics. 5-8. DOI: 10.1109/GENSIPS.2013.6735914  0.497
2012 Dorkhom SJ, Zaman S, Thomas SK, Alexanian R, Shah JJ, Weber DM, Wang M, Anderson ML, Baladandayuthapani V, Lin YH, Fu M, Stellrecht CM, de Partovi CM, Gandhi VV, Orlowski RZ. Phase II Study of the c-Met Inhibitor ARQ 197 (Tivantinib) in Patients with Relapsed Multiple Myeloma. Blood. 120: 2976-2976. DOI: 10.1182/Blood.V120.21.2976.2976  0.315
2012 Jennings EM, Morris JS, Carroll RJ, Manyam GC, Baladandayuthapani V. Hierarchical Bayesian methods for integration of various types of genomics data Proceedings - Ieee International Workshop On Genomic Signal Processing and Statistics. 5-8. DOI: 10.1109/GENSIPS.2012.6507713  0.592
2012 Hrafnkelsson B, Morris JS, Baladandayuthapani V. Spatial modeling of annual minimum and maximum temperatures in Iceland Meteorology and Atmospheric Physics. 116: 43-61. DOI: 10.1007/s00703-010-0101-0  0.41
2011 Morris JS, Baladandayuthapani V, Herrick RC, Sanna P, Gutstein H. AUTOMATED ANALYSIS OF QUANTITATIVE IMAGE DATA USING ISOMORPHIC FUNCTIONAL MIXED MODELS, WITH APPLICATION TO PROTEOMICS DATA. The Annals of Applied Statistics. 5: 894-923. PMID 22408711 DOI: 10.1214/10-Aoas407  0.554
2011 Thompson PA, Brewster AM, Kim-Anh D, Baladandayuthapani V, Broom BM, Edgerton ME, Hahn KM, Murray JL, Sahin A, Tsavachidis S, Wang Y, Zhang L, Hortobagyi GN, Mills GB, Bondy ML. Selective genomic copy number imbalances and probability of recurrence in early-stage breast cancer. Plos One. 6: e23543. PMID 21858162 DOI: 10.1371/Journal.Pone.0023543  0.303
2011 Jones RJ, Baladandayuthapani V, Neelapu S, Fayad LE, Romaguera JE, Wang M, Sharma R, Yang D, Orlowski RZ. HDM-2 inhibition suppresses expression of ribonucleotide reductase subunit M2, and synergistically enhances gemcitabine-induced cytotoxicity in mantle cell lymphoma. Blood. 118: 4140-9. PMID 21844567 DOI: 10.1182/Blood-2011-03-340323  0.315
2011 Bonato V, Baladandayuthapani V, Broom BM, Sulman EP, Aldape KD, Do KA. Bayesian ensemble methods for survival prediction in gene expression data. Bioinformatics (Oxford, England). 27: 359-67. PMID 21148161 DOI: 10.1093/Bioinformatics/Btq660  0.375
2010 Baladandayuthapani V, Ji Y, Talluri R, Nieto-Barajas LE, Morris JS. Bayesian Random Segmentation Models to Identify Shared Copy Number Aberrations for Array CGH Data. Journal of the American Statistical Association. 105: 1358-1375. PMID 21512611 DOI: 10.1198/Jasa.2010.Ap09250  0.722
2010 Zhou L, Huang JZ, Martinez JG, Maity A, Baladandayuthapani V, Carroll RJ. Reduced Rank Mixed Effects Models for Spatially Correlated Hierarchical Functional Data. Journal of the American Statistical Association. 105: 390-400. PMID 20396628 DOI: 10.1198/Jasa.2010.Tm08737  0.631
2008 Baladandayuthapani V, Mallick BK, Young Hong M, Lupton JR, Turner ND, Carroll RJ. Bayesian hierarchical spatially correlated functional data analysis with application to colon carcinogenesis. Biometrics. 64: 64-73. PMID 17608780 DOI: 10.1111/J.1541-0420.2007.00846.X  0.536
2008 Baladandayuthapani V, Mallick BK, Carroll RJ. Spatially adaptive Bayesian penalized regression splines (P-splines) (Journal of Computational and Graphical Statistics (2005) 14, 378-394) Journal of Computational and Graphical Statistics. 17: 515. DOI: 10.1198/106186008X322517  0.369
2005 Baladandayuthapani V, Mallick BK, Carroll RJ. Spatially Adaptive Bayesian Penalized Regression Splines (P-splines) Journal of Computational and Graphical Statistics. 14: 378-394. DOI: 10.1198/106186005X47345  0.492
2005 Baladandayuthapani V, Ray S, Mallick BK. Bayesian Methods for DNA Microarray Data Analysis Handbook of Statistics. 25: 713-742. DOI: 10.1016/S0169-7161(05)25024-1  0.611
Low-probability matches (unlikely to be authored by this person)
2012 Lu C, Stewart DJ, Lee JJ, Ji L, Ramesh R, Jayachandran G, Nunez MI, Wistuba II, Erasmus JJ, Hicks ME, Grimm EA, Reuben JM, Baladandayuthapani V, Templeton NS, McMannis JD, et al. Phase I clinical trial of systemically administered TUSC2(FUS1)-nanoparticles mediating functional gene transfer in humans. Plos One. 7: e34833. PMID 22558101 DOI: 10.1371/Journal.Pone.0034833  0.299
2016 Xiaobo C, Majidi M, Feng M, Shao R, Wang J, Zhao Y, Baladandayuthapani V, Song J, Fang B, Ji L, Mehran R, Roth JA. TUSC2(FUS1)-erlotinib Induced Vulnerabilities in Epidermal Growth Factor Receptor(EGFR) Wildtype Non-small Cell Lung Cancer(NSCLC) Targeted by the Repurposed Drug Auranofin. Scientific Reports. 6: 35741. PMID 27845352 DOI: 10.1038/Srep35741  0.299
2019 Ye JC, Chen L, Chen J, Parkin B, Polk A, Kandarpa M, Cole CE, Campagnaro EL, Robinson D, Wu Y, Talpaz M, Yesil J, Auclair D, Bergsagel PL, Chinnaiyan A, ... Baladandayuthapani V, et al. Aneuploidy Is Associated with Inferior Survival in Relapsed Refractory Multiple Myeloma Patients Blood. 134: 4360-4360. DOI: 10.1182/Blood-2019-124135  0.298
2011 Farhan S, Lin H, Baladandayuthapani V, Shah N, Bashir Q, Hosing CM, Popat U, Parmar S, Dinh YT, Qureshi S, Rondon G, Giralt S, Champlin R, Qazilbash MH. Response Before Autologous Hematopoietic Stem Cell Transplantation Is An Important Predictor of Outcome in Multiple Myeloma, Blood. 118: 4119-4119. DOI: 10.1182/Blood.V118.21.4119.4119  0.297
2013 Orlowski RZ, Zaman S, Thomas SK, Alexanian R, Shah JJ, Weber DM, Wang M, Holloway AN, Baladandayuthapani V, Lin HY, Fu M, Stellrecht CM, de Partovi CM, Gandhi V. Phase II Study Of The c-MET Inhibitor ARQ 197 (Tivantinib) In Patients With Relapsed Or Relapsed/Refractory Multiple Myeloma (RRMM) Blood. 122: 1953-1953. DOI: 10.1182/Blood.V122.21.1953.1953  0.295
2009 Kuhn DJ, Bjorklund CC, Magarotto V, Matthews JA, Wang M, Baladandayuthapani V, Orlowski RZ. Bortezomib Resistance Is Mediated by Increased Signaling through the Insulin-Like Growth Factor-1/Akt Axis. Blood. 114: 2739-2739. DOI: 10.1182/Blood.V114.22.2739.2739  0.292
2011 Hassabo HM, Hassan M, George B, Wen S, Baladandayuthapani V, Kopetz S, Fogelman DR, Kee BK, Eng C, Garrett CR. Survival advantage associated with metformin usage in patients with colorectal cancer (CRC) and type II noninsulin-dependent diabetes (NIDDM). Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 29: 3618. PMID 28020849 DOI: 10.1200/Jco.2011.29.15_Suppl.3618  0.291
2016 Bock F, Lu G, Srour S, Gaballa S, Lin HY, Baladandayuthapani V, Honhar M, Stich M, Shah ND, Bashir Q, Patel K, Popat U, Hosing C, Korbling M, Delgado R, et al. Outcome of Patients with Multiple Myeloma and CKS1B Gene Amplification after Autologous Hematopoietic Stem Cell Transplantation. Biology of Blood and Marrow Transplantation : Journal of the American Society For Blood and Marrow Transplantation. PMID 27638366 DOI: 10.1016/J.Bbmt.2016.09.003  0.291
2023 Liu Q, Li G, Baladandayuthapani V. Pan-Cancer Drug Response Prediction Using Integrative Principal Component Regression. Biorxiv : the Preprint Server For Biology. PMID 37873111 DOI: 10.1101/2023.10.03.560366  0.286
2016 Zhang XD, Baladandayuthapani V, Lin H, Mulligan G, Li B, Esseltine DW, Qi L, Xu J, Hunziker W, Barlogie B, Usmani SZ, Zhang Q, Crowley J, Hoering A, Shah JJ, et al. Tight Junction Protein 1 Modulates Proteasome Capacity and Proteasome Inhibitor Sensitivity in Multiple Myeloma via EGFR/JAK1/STAT3 Signaling. Cancer Cell. PMID 27132469 DOI: 10.1016/J.Ccell.2016.03.026  0.286
2016 Nieto-Barajas L, Ji Y, Baladandayuthapani V. A semiparametric Bayesian model for comparing DNA copy numbers. Brazilian Journal of Probability and Statistics. 30: 345-365. PMID 37799327 DOI: 10.1214/15-bjps283  0.285
2017 Wadhwa R, Wang X, Baladandayuthapani V, Liu B, Shiozaki H, Shimodaira Y, Lin Q, Elimova E, Hofstetter WL, Swisher SG, Rice DC, Maru DM, Kalhor N, Bhutani MS, Weston B, et al. Nuclear expression of Gli-1 is predictive of pathologic complete response to chemoradiation in trimodality treated oesophageal cancer patients. British Journal of Cancer. PMID 28728163 DOI: 10.1038/Bjc.2017.225  0.285
2012 Prasad S, Yadav VR, Sung B, Reuter S, Kannappan R, Deorukhkar A, Diagaradjane P, Wei C, Baladandayuthapani V, Krishnan S, Guha S, Aggarwal BB. Ursolic acid inhibits growth and metastasis of human colorectal cancer in an orthotopic nude mouse model by targeting multiple cell signaling pathways: chemosensitization with capecitabine. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 18: 4942-53. PMID 22832932 DOI: 10.1158/1078-0432.Ccr-11-2805  0.284
2019 Banerjee S, Akbani R, Baladandayuthapani V. Spectral clustering via sparse graph structure learning with application to proteomic signaling networks in cancer Computational Statistics & Data Analysis. 132: 46-69. DOI: 10.1016/J.Csda.2018.08.009  0.283
2021 Ha MJ, Stingo FC, Baladandayuthapani V. Bayesian Structure Learning in Multi-layered Genomic Networks. Journal of the American Statistical Association. 116: 605-618. PMID 34239216 DOI: 10.1080/01621459.2020.1775611  0.283
2015 Sathyan P, Zinn PO, Marisetty AL, Liu B, Kamal MM, Singh SK, Bady P, Lu L, Wani KM, Veo BL, Gumin J, Kassem DH, Robinson F, Weng C, Baladandayuthapani V, et al. Mir-21-Sox2 Axis Delineates Glioblastoma Subtypes with Prognostic Impact. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 35: 15097-112. PMID 26558781 DOI: 10.1523/Jneurosci.1265-15.2015  0.282
2011 Hassabo H, Hassan M, George B, Wen S, Baladandayuthapani V, Kopetz S, Fogelman DR, Kee BK, Eng C, Garrett CR. Retrospective evaluation of patients with colorectal cancer (CRC) and type II non-insulin-dependent diabetes (NIDDM). Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 29: 507. PMID 27985713 DOI: 10.1200/Jco.2011.29.4_Suppl.507  0.28
2009 Hunsucker SA, Magarotto V, Matthews JA, Wang M, Baladandayuthapani V, Voorhees PM, Xie H, Cornfeld M, Nemeth JA, Orlowski RZ. Inhibition of Interleukin-6 Signaling with CNTO 328 Sensitizes Plasma Cell Dyscrasias to the Effects of Melphalan in Association with Suppression of Signaling through Protein Kinase B/Akt. Blood. 114: 1836-1836. DOI: 10.1182/Blood.V114.22.1836.1836  0.28
2018 Meraz IM, Majidi M, Cao X, Lin H, Li L, Wang J, Baladandayuthapani V, Rice D, Sepesi B, Ji L, Roth JA. TUSC2 immunogene synergizes with anti-PD1 through enhanced proliferation and infiltration of natural killer cells in syngeneic Kras-mutant mouse lung cancer models. Cancer Immunology Research. PMID 29339375 DOI: 10.1158/2326-6066.Cir-17-0273  0.278
2009 Bjorklund CC, Kuhn DJ, Matthews JA, Wang M, Baladandayuthapani V, Orlowski RZ. Activation of the Wnt/β-Catenin Pathway Mediates Lenalidomide Resistance in Multiple Myeloma. Blood. 114: 113-113. DOI: 10.1182/Blood.V114.22.113.113  0.277
2016 Nieto-Barajas L, Ji Y, Baladandayuthapani V. A semiparametric Bayesian model for comparing DNA copy numbers Brazilian Journal of Probability and Statistics. 30: 345-365. DOI: 10.1214/15-Bjps283  0.277
2014 El-Mabhouh AA, Ayres ML, Shpall EJ, Baladandayuthapani V, Keating MJ, Wierda WG, Gandhi V. Evaluation of bendamustine in combination with fludarabine in primary chronic lymphocytic leukemia cells. Blood. 123: 3780-9. PMID 24747434 DOI: 10.1182/Blood-2013-12-541433  0.274
2012 Chu F, Westin JR, Zhang M, Feng L, Baladandayuthapani V, Wang Z, Allen R, Wallace M, Vence L, Radvanyi L, Kwak LW, Rotem-Yehudar R, Davis RE, Neelapu SS. Immunological Effects and Predictive Gene Signatures in Patients with Relapsed Follicular Lymphoma Treated with CT-011, a Humanized Anti-PD-1 Monoclonal Antibody Blood. 120: 162-162. DOI: 10.1182/Blood.V120.21.162.162  0.274
2008 Zhang N, Ge G, Meyer R, Sethi S, Basu D, Pradhan S, Zhao YJ, Li XN, Cai WW, El-Naggar AK, Baladandayuthapani V, Kittrell FS, Rao PH, Medina D, Pati D. Overexpression of Separase induces aneuploidy and mammary tumorigenesis. Proceedings of the National Academy of Sciences of the United States of America. 105: 13033-8. PMID 18728194 DOI: 10.1073/Pnas.0801610105  0.273
2017 Lee HC, Wang H, Baladandayuthapani V, Lin H, He J, Jones RJ, Kuiatse I, Gu D, Wang Z, Ma W, Lim J, O'Brien S, Keats J, Yang J, Davis RE, et al. RNA Polymerase I Inhibition with CX-5461 as a Novel Therapeutic Strategy to Target MYC in Multiple Myeloma. British Journal of Haematology. 177: 80-94. PMID 28369725 DOI: 10.1111/Bjh.14525  0.273
2014 Westin JR, Chu F, Zhang M, Fayad LE, Kwak LW, Fowler N, Romaguera J, Hagemeister F, Fanale M, Samaniego F, Feng L, Baladandayuthapani V, Wang Z, Ma W, Gao Y, et al. Safety and activity of PD1 blockade by pidilizumab in combination with rituximab in patients with relapsed follicular lymphoma: a single group, open-label, phase 2 trial. The Lancet. Oncology. 15: 69-77. PMID 24332512 DOI: 10.1016/S1470-2045(13)70551-5  0.273
2012 Rawal S, Fowler N, Zhang M, Wang Z, Muzzafar T, Harun N, Baladandayuthapani V, Sharma R, Delgado D, Wallace M, Heise C, Lacerte LC, Samaniego F, Davis RE, Neelapu SS. Activation of T and NK Cells Following Lenalidomide Therapy in Patients with Follicular Lymphoma. Blood. 120: 2766-2766. DOI: 10.1182/Blood.V120.21.2766.2766  0.271
2022 Bhattacharyya R, Henderson N, Baladandayuthapani V. BaySyn: Bayesian Evidence Synthesis for Multi-system Multiomic Integration. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 28: 275-286. PMID 36540984  0.271
2014 Voo KS, Foglietta M, Percivalle E, Chu F, Nattamai D, Harline M, Lee ST, Bover L, Lin HY, Baladandayuthapani V, Delgado D, Luong A, Davis RE, Kwak LW, Liu YJ, et al. Selective targeting of Toll-like receptors and OX40 inhibit regulatory T-cell function in follicular lymphoma. International Journal of Cancer. Journal International Du Cancer. 135: 2834-46. PMID 24771328 DOI: 10.1002/Ijc.28937  0.268
2017 Ye X, Wang R, Bhattacharya R, Boulbes D, Fan F, Xia L, Adoni H, Ajami NJ, Wong MC, Smith DP, Petrosino JF, Venable S, Qiao W, Baladandayuthapani V, Maru DM, et al. Fusobacterium nucleatum subspecies animalis influences pro-inflammatory cytokine expression and monocyte activation in human colorectal tumors. Cancer Prevention Research (Philadelphia, Pa.). PMID 28483840 DOI: 10.1158/1940-6207.Capr-16-0178  0.268
2012 Kuhn DJ, Berkova Z, Jones RJ, Woessner R, Bjorklund CC, Ma W, Davis RE, Lin P, Wang H, Madden TL, Wei C, Baladandayuthapani V, Wang M, Thomas SK, Shah JJ, et al. Targeting the insulin-like growth factor-1 receptor to overcome bortezomib resistance in preclinical models of multiple myeloma. Blood. 120: 3260-70. PMID 22932796 DOI: 10.1182/Blood-2011-10-386789  0.267
2017 Baljevic M, Zaman S, Baladandayuthapani V, Lin YH, de Partovi CM, Berkova Z, Amini B, Thomas SK, Shah JJ, Weber DM, Fu M, Cleeland CS, Wang XS, Stellrecht CM, Davis RE, et al. Phase II study of the c-MET inhibitor tivantinib (ARQ 197) in patients with relapsed or relapsed/refractory multiple myeloma. Annals of Hematology. PMID 28337527 DOI: 10.1007/S00277-017-2980-3  0.266
2014 Ajani JA, Wang X, Song S, Suzuki A, Taketa T, Sudo K, Wadhwa R, Hofstetter WL, Komaki R, Maru DM, Lee JH, Bhutani MS, Weston B, Baladandayuthapani V, Yao Y, et al. ALDH-1 expression levels predict response or resistance to preoperative chemoradiation in resectable esophageal cancer patients. Molecular Oncology. 8: 142-9. PMID 24210755 DOI: 10.1016/J.Molonc.2013.10.007  0.266
2018 Ni Y, Stingo FC, Baladandayuthapani V. Bayesian Graphical Regression. Journal of the American Statistical Association. 114: 184-197. PMID 36937091 DOI: 10.1080/01621459.2017.1389739  0.265
2011 George B, You Y, Viswanathan C, Wen S, Baladandayuthapani V, Overman MJ, Kee BK, Kopetz S, Eng C, Garrett CR. Survival advantage associated with palliative oophorectomy in patients with metastatic colorectal cancer (CRC) to the ovaries (mCRC-O): A single institution retrospective analysis. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 29: 539. PMID 27985800 DOI: 10.1200/Jco.2011.29.4_Suppl.539  0.265
2012 Westin JR, Chu F, Fayad LE, Kwak LW, Fowler NH, Romaguera JE, Hagemeister F, Fanale M, Samaniego F, Allen R, Feng L, Baladandayuthapani V, Rotem-Yehudar R, Neelapu S. Phase II Safety and Efficacy Study of CT-011, a Humanized Anti-PD-1 Monoclonal Antibody, in Combination with Rituximab in Patients with Relapsed Follicular Lymphoma Blood. 120: 793-793. DOI: 10.1182/Blood.V120.21.793.793  0.264
2021 Ni Y, Baladandayuthapani V, Vannucci M, Stingo FC. Bayesian graphical models for modern biological applications. Statistical Methods & Applications. 31: 197-225. PMID 35673326 DOI: 10.1007/s10260-021-00572-8  0.262
2022 Panigrahi S, Mohammed S, Rao A, Baladandayuthapani V. Integrative Bayesian models using Post-selective inference: A case study in radiogenomics. Biometrics. PMID 35973786 DOI: 10.1111/biom.13740  0.262
2012 Garrett CR, Hassabo HM, Bhadkamkar NA, Wen S, Baladandayuthapani V, Kee BK, Eng C, Hassan MM. Survival advantage observed with the use of metformin in patients with type II diabetes and colorectal cancer. British Journal of Cancer. 106: 1374-8. PMID 22421948 DOI: 10.1038/Bjc.2012.71  0.262
2013 Shah RA, Mohite S, Baladandayuthapani V, Thomas SK, Weber DM, Wang M, Alexanian R, Qazilbash MH, Popat UR, Champlin RE, Shah N, Bashir Q, Parmar S, Nieto Y, Ahmed S, et al. Circulating Plasma Cells By Routine Complete Blood Count Identify Patients With Similar Outcome As Plasma Cell Leukemia Blood. 122: 5356-5356. DOI: 10.1182/Blood.V122.21.5356.5356  0.258
2013 Rawal S, Chu F, Zhang M, Park HJ, Nattamai D, Kannan S, Sharma R, Delgado D, Chou T, Lin HY, Baladandayuthapani V, Luong A, Vega F, Fowler N, Dong C, et al. Cross talk between follicular Th cells and tumor cells in human follicular lymphoma promotes immune evasion in the tumor microenvironment Journal of Immunology. 190: 6681-6693. PMID 23686488 DOI: 10.4049/Jimmunol.1201363  0.257
2017 Gentile E, Oba T, Lin J, Shao R, Meng F, Cao X, Lin HY, Mourad M, Pataer A, Baladandayuthapani V, Cai D, Roth JA, Ji L. Cationic liquid crystalline nanoparticles for the delivery of synthetic RNAi-based therapeutics. Oncotarget. PMID 28637023 DOI: 10.18632/Oncotarget.18421  0.257
2014 Wu W, Merriman K, Nabaah A, Seval N, Seval D, Lin H, Wang M, Qazilbash MH, Baladandayuthapani V, Berry D, Orlowski RZ, Lee MH, Yeung SCJ. The association of diabetes and anti-diabetic medications with clinical outcomes in multiple myeloma British Journal of Cancer. 111: 628-636. PMID 24921909 DOI: 10.1038/Bjc.2014.307  0.256
2009 Mallick BK, Gold DL, Baladandayuthapani V. Bayesian Analysis of Gene Expression Data Bayesian Analysis of Gene Expression Data. 1-240. DOI: 10.1002/9780470742785  0.255
2019 Marisetty AL, Lu L, Veo BL, Liu B, Coarfa C, Kamal MM, Kassem DH, Irshad K, Lu Y, Gumin J, Henry V, Paulucci-Holthauzen A, Rao G, Baladandayuthapani V, Lang FF, et al. REST-DRD2 mechanism impacts glioblastoma stem cell-mediated tumorigenesis. Neuro-Oncology. PMID 30953587 DOI: 10.1093/Neuonc/Noz030  0.255
2012 Jones RJ, Bjorklund CC, Baladandayuthapani V, Kuhn DJ, Orlowski RZ. Drug resistance to inhibitors of the human double minute-2 E3 ligase is mediated by point mutations of p53, but can be overcome with the p53 targeting agent RITA. Molecular Cancer Therapeutics. 11: 2243-53. PMID 22933706 DOI: 10.1158/1535-7163.Mct-12-0135  0.255
2017 Zhang Y, Linder MH, Shojaie A, Ouyang Z, Shen R, Baggerly KA, Baladandayuthapani V, Zhao H. Dissecting Pathway Disturbances Using Network Topology and Multi-platform Genomics Data. Statistics in Biosciences. 10: 86-106. PMID 37388623 DOI: 10.1007/s12561-017-9193-0  0.254
2015 Kuiatse I, Baladandayuthapani V, Lin HY, Thomas SK, Bjorklund CC, Weber DM, Wang M, Shah JJ, Zhang XD, Jones RJ, Ansell SM, Yang G, Treon SP, Orlowski RZ. Targeting the Spleen Tyrosine Kinase with Fostamatinib as a Strategy against Waldenström Macroglobulinemia. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 21: 2538-45. PMID 25748087 DOI: 10.1158/1078-0432.Ccr-14-1462  0.251
2015 Ni Y, Marchetti GM, Baladandayuthapani V, Stingo FC. Bayesian approaches for large biological networks Nonparametric Bayesian Inference in Biostatistics. 153-174. DOI: 10.1007/978-3-319-19518-6_8  0.25
2023 Mohammed S, Kurtek S, Bharath K, Rao A, Baladandayuthapani V. Tumor radiogenomics in gliomas with Bayesian layered variable selection. Medical Image Analysis. 90: 102964. PMID 37797481 DOI: 10.1016/j.media.2023.102964  0.249
2018 Ni H, Shirazi F, Baladandayuthapani V, Lin H, Kuiatse I, Wang H, Jones RJ, Berkova Z, Hitoshi Y, Ansell SM, Treon SP, Thomas SK, Lee HC, Wang ZQ, Davis RE, et al. Targeting Myddosome Signaling in Waldenström's Macroglobulinemia with the Interleukin-1 Receptor-associated Kinase 1/4 Inhibitor R191. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 30126942 DOI: 10.1158/1078-0432.Ccr-17-3265  0.246
2018 Kappadath SC, Mikell J, Balagopal A, Baladandayuthapani V, Kaseb A, Mahvash A. Hepatocellular Carcinoma Tumor Dose Response After 90Y-radioembolization With Glass Microspheres Using 90Y-SPECT/CT-Based Voxel Dosimetry. International Journal of Radiation Oncology Biology Physics. 102: 451-461. PMID 30191875 DOI: 10.1016/J.Ijrobp.2018.05.062  0.245
2023 Osher N, Kang J, Krishnan S, Rao A, Baladandayuthapani V. SPARTIN: a Bayesian method for the quantification and characterization of cell type interactions in spatial pathology data. Frontiers in Genetics. 14: 1175603. PMID 37274781 DOI: 10.3389/fgene.2023.1175603  0.242
2017 Lin JS, Fuentes DT, Chandler A, Prabhu SS, Weinberg JS, Baladandayuthapani V, Hazle JD, Schellingerhout D. Performance Assessment for Brain MR Imaging Registration Methods. Ajnr. American Journal of Neuroradiology. PMID 28279984 DOI: 10.3174/Ajnr.A5122  0.237
2014 Bjorklund CC, Baladandayuthapani V, Lin HY, Jones RJ, Kuiatse I, Wang H, Yang J, Shah JJ, Thomas SK, Wang M, Weber DM, Orlowski RZ. Evidence of a role for CD44 and cell adhesion in mediating resistance to lenalidomide in multiple myeloma: therapeutic implications. Leukemia. 28: 373-83. PMID 23760401 DOI: 10.1038/Leu.2013.174  0.237
2023 Ni Y, Stingo FC, Baladandayuthapani V. Bayesian Covariate-Dependent Gaussian Graphical Models with Varying Structure. Journal of Machine Learning Research : Jmlr. 23. PMID 37799290  0.235
2013 Pemmaraju N, Tanaka MF, Ravandi F, Lin H, Baladandayuthapani V, Rondon G, Giralt SA, Chen J, Pierce S, Cortes J, Kantarjian H, Champlin RE, De Lima M, Qazilbash MH. Outcomes in patients with relapsed or refractory acute promyelocytic leukemia treated with or without autologous or allogeneic hematopoietic stem cell transplantation. Clinical Lymphoma, Myeloma & Leukemia. 13: 485-92. PMID 23769669 DOI: 10.1016/J.Clml.2013.02.023  0.234
2016 Jones RJ, Iempridee T, Wang X, Lee HC, Mertz JE, Kenney SC, Lin HY, Baladandayuthapani V, Dawson C, Shah J, Weber D, Orlowski RZ. Lenalidomide, Thalidomide, and Pomalidomide Reactivate the Epstein-Barr Virus Lytic Cycle Through Phosphoinositide 3-kinase Signaling and Ikaros Expression. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 27297582 DOI: 10.1158/1078-0432.Ccr-15-2242  0.232
2012 Gregory KB, Coombes KR, Momin A, Girard L, Byers LA, Lin S, Peyton M, Heymach JV, Minna JD, Baladandayuthapani V. Latent feature decompositions for integrative analysis of diverse high-throughput genomic data Proceedings - Ieee International Workshop On Genomic Signal Processing and Statistics. 130-134. DOI: 10.1109/GENSIPS.2012.6507746  0.227
2023 Bhadra A, Baladandayuthapani V. Integrative Sparse Bayesian Analysis of High-dimensional Multi-platform Genomic Data in Glioblastoma. Ieee International Workshop On Genomic Signal Processing and Statistics : [Proceedings]. Ieee International Workshop On Genomic Signal Processing and Statistics. 2013: 1-4. PMID 37016713 DOI: 10.1109/GENSIPS.2013.6735913  0.223
2023 Bhadra A, Baladandayuthapani V. Integrative Sparse Bayesian Analysis of High-dimensional Multi-platform Genomic Data in Glioblastoma. Ieee International Workshop On Genomic Signal Processing and Statistics : [Proceedings]. Ieee International Workshop On Genomic Signal Processing and Statistics. 2013: 1-4. PMID 37016713 DOI: 10.1109/GENSIPS.2013.6735913  0.223
2017 Bharath K, Kambadur P, Dey DK, Rao A, Baladandayuthapani V. STATISTICAL TESTS FOR LARGE TREE-STRUCTURED DATA. Journal of the American Statistical Association. 112: 1733-1743. PMID 37013199 DOI: 10.1080/01621459.2016.1240081  0.222
2014 Fowler NH, Davis RE, Rawal S, Nastoupil L, Hagemeister FB, McLaughlin P, Kwak LW, Romaguera JE, Fanale MA, Fayad LE, Westin JR, Shah J, Orlowski RZ, Wang M, Turturro F, ... ... Baladandayuthapani V, et al. Safety and activity of lenalidomide and rituximab in untreated indolent lymphoma: an open-label, phase 2 trial. The Lancet. Oncology. 15: 1311-8. PMID 25439689 DOI: 10.1016/S1470-2045(14)70455-3  0.221
2010 Lin YX, Baladandayuthapani V, Bonato V, Do KA. Estimating shared copy number aberrations for array CGH data: The linear-median method Cancer Informatics. 9: 229-249. DOI: 10.4137/CIN.S5614  0.221
2006 Phadke AP, de la Concha-Bermejillo A, Wolf AM, Andersen PR, Baladandayuthapani V, Collisson EW. Pathogenesis of a Texas feline immunodeficiency virus isolate: an emerging subtype of clade B. Veterinary Microbiology. 115: 64-76. PMID 16574348 DOI: 10.1016/J.Vetmic.2006.02.012  0.219
2023 Ordonez C, Garcia-Alvarado C, Baladandayuthapani V. Bayesian Variable Selection in Linear Regression in One Pass for Large Data Sets. Acm Transactions On Knowledge Discovery From Data. 9. PMID 37012970 DOI: 10.1145/2629617  0.206
2023 Ordonez C, Garcia-Alvarado C, Baladandayuthapani V. Bayesian Variable Selection in Linear Regression in One Pass for Large Data Sets. Acm Transactions On Knowledge Discovery From Data. 9. PMID 37012970 DOI: 10.1145/2629617  0.206
2008 Nehete PN, Nehete BP, Hill L, Manuri PR, Baladandayuthapani V, Feng L, Simmons J, Sastry KJ. Selective induction of cell-mediated immunity and protection of rhesus macaques from chronic SHIV(KU2) infection by prophylactic vaccination with a conserved HIV-1 envelope peptide-cocktail. Virology. 370: 130-41. PMID 17920095 DOI: 10.1016/J.Virol.2007.08.022  0.205
2020 Bhattacharyya R, Ha MJ, Liu Q, Akbani R, Liang H, Baladandayuthapani V. Personalized Network Modeling of the Pan-Cancer Patient and Cell Line Interactome. Jco Clinical Cancer Informatics. 4: 399-411. PMID 32374631 DOI: 10.1200/CCI.19.00140  0.2
2022 Das P, Peterson CB, Ni Y, Reuben A, Zhang J, Zhang J, Do KA, Baladandayuthapani V. Bayesian hierarchical quantile regression with application to characterizing the immune architecture of lung cancer. Biometrics. PMID 36239535 DOI: 10.1111/biom.13774  0.198
2023 Yao TH, Wu Z, Bharath K, Li J, Baladandayuthapani V. PROBABILISTIC LEARNING OF TREATMENT TREES IN CANCER. The Annals of Applied Statistics. 17: 1884-1908. PMID 37711665 DOI: 10.1214/22-aoas1696  0.196
2015 Wait JM, Cody D, Jones AK, Rong J, Baladandayuthapani V, Kappadath SC. Performance Evaluation of Material Decomposition With Rapid-Kilovoltage-Switching Dual-Energy CT and Implications for Assessing Bone Mineral Density. Ajr. American Journal of Roentgenology. 204: 1234-41. PMID 26001233 DOI: 10.2214/Ajr.14.13093  0.194
2023 Masotti M, Osher N, Eliason J, Rao A, Baladandayuthapani V. DIMPLE: An R package to quantify, visualize, and model spatial cellular interactions from multiplex imaging with distance matrices. Patterns (New York, N.Y.). 4: 100879. PMID 38106614 DOI: 10.1016/j.patter.2023.100879  0.194
2020 Liu Q, Ha MJ, Bhattacharyya R, Garmire L, Baladandayuthapani V. Network-Based Matching of Patients and Targeted Therapies for Precision Oncology. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 25: 623-634. PMID 31797633  0.193
2018 Shoemaker K, Hobbs BP, Bharath K, Ng CS, Baladandayuthapani V. Tree-based Methods for Characterizing Tumor Density Heterogeneity. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 23: 216-227. PMID 29218883  0.189
2016 Azadeh S, Hobbs BP, Ma L, Nielsen DA, Moeller FG, Baladandayuthapani V. INTEGRATIVE BAYESIAN ANALYSIS OF NEUROIMAGING-GENETIC DATA THROUGH HIERARCHICAL DIMENSION REDUCTION. Proceedings. Ieee International Symposium On Biomedical Imaging. 2016: 824-828. PMID 27917260 DOI: 10.1109/ISBI.2016.7493393  0.186
2023 Masotti M, Osher N, Eliason J, Rao A, Baladandayuthapani V. DIMPLE: AN R PACKAGE TO QUANTIFY, VISUALIZE, AND MODEL SPATIAL CELLULAR INTERACTIONS FROM MULTIPLEX IMAGING WITH DISTANCE MATRICES. Biorxiv : the Preprint Server For Biology. PMID 37503048 DOI: 10.1101/2023.07.20.548170  0.186
2018 Zinn PO, Singh SK, Kotrotsou A, Hassan I, Thomas G, Luedi MM, Elakkad A, Elshafeey N, Idris T, Mosley J, Gumin J, Fuller GN, deGroot JF, Baladandayuthapani V, Sulman EP, et al. A co-clinical radiogenomic validation study - Conserved magnetic resonance radiomic appearance of Periostin expressing Glioblastoma in patients and xenograft models. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 30054278 DOI: 10.1158/1078-0432.Ccr-17-3420  0.185
2013 Cabrera W, Ordonez C, Matusevich DS, Baladandayuthapani V. Bayesian variable selection for linear regression in high dimensional microarray data International Conference On Information and Knowledge Management, Proceedings. 17-18. DOI: 10.1145/2512089.2512094  0.182
2014 Liu S, Nielsen DA, Lane SD, Schmitz J, Baladandayuthapani V, Cunningham K, Moeller F. Cocaine dependence moderates the relationship between serotonin transporter polymorphisms and measures of impulsivity Drug and Alcohol Dependence. 140: e126. DOI: 10.1016/J.Drugalcdep.2014.02.359  0.175
2010 Navas M, Ordonez C, Baladandayuthapani V. On the computation of stochastic search variable selection in linear regression with UDFs Proceedings - Ieee International Conference On Data Mining, Icdm. 941-946. DOI: 10.1109/ICDM.2010.79  0.173
2014 Guha S, Ji Y, Baladandayuthapani V. Bayesian disease classification using copy number data Cancer Informatics. 13: 83-91. DOI: 10.4137/CIn.s13785  0.171
2020 Ray D, Salvatore M, Bhattacharyya R, Wang L, Du J, Mohammed S, Purkayastha S, Halder A, Rix A, Barker D, Kleinsasser M, Zhou Y, Bose D, Song P, Banerjee M, ... Baladandayuthapani V, et al. Predictions, role of interventions and effects of a historic national lockdown in India's response to the COVID-19 pandemic: data science call to arms. Harvard Data Science Review. 2020. PMID 32607504 DOI: 10.1162/99608f92.60e08ed5  0.162
2015 Zhang S, Lu Z, Mao W, Ahmed AA, Yang H, Zhou J, Jennings N, Rodriguez-Aguayo C, Lopez-Berestein G, Miranda R, Qiao W, Baladandayuthapani V, Li Z, Sood AK, Liu J, et al. CDK5 Regulates Paclitaxel Sensitivity in Ovarian Cancer Cells by Modulating AKT Activation, p21Cip1- and p27Kip1-Mediated G1 Cell Cycle Arrest and Apoptosis. Plos One. 10: e0131833. PMID 26146988 DOI: 10.1371/Journal.Pone.0131833  0.159
2022 Acharyya S, Zhou X, Baladandayuthapani V. SpaceX: Gene Co-expression Network Estimation for Spatial Transcriptomics. Bioinformatics (Oxford, England). PMID 36179087 DOI: 10.1093/bioinformatics/btac645  0.154
2023 Morikawa A, Li J, Ulintz P, Cheng X, Apfel A, Robinson D, Hopkins A, Kumar-Sinha C, Wu YM, Serhan H, Verbal K, Thomas D, Hayes DF, Chinnaiyan AM, Baladandayuthapani V, et al. Optimizing Precision Medicine for Breast Cancer Brain Metastases with Functional Drug Response Assessment. Cancer Research Communications. 3: 1093-1103. PMID 37377606 DOI: 10.1158/2767-9764.CRC-22-0492  0.15
2012 Garcia-Alvarado C, Ordonez C, Baladandayuthapani V. Querying external source code files of programs connecting to a relational database International Conference On Information and Knowledge Management, Proceedings. 9-16. DOI: 10.1145/2389686.2389689  0.137
2012 Garrett CR, George B, Viswanathan C, Bhadkamkar NA, Wen S, Baladandayuthapani V, You YN, Kopetz ES, Overman MJ, Kee BK, Eng C. Survival benefit associated with surgical oophorectomy in patients with colorectal cancer metastatic to the ovary. Clinical Colorectal Cancer. 11: 191-4. PMID 22280844 DOI: 10.1016/j.clcc.2011.12.003  0.133
2013 Phillip CJ, Zaman S, Shentu S, Balakrishnan K, Zhang J, Baladandayuthapani V, Taverna P, Redkar S, Wang M, Stellrecht CM, Gandhi V. Targeting MET kinase with the small-molecule inhibitor amuvatinib induces cytotoxicity in primary myeloma cells and cell lines. Journal of Hematology & Oncology. 6: 92. PMID 24326130 DOI: 10.1186/1756-8722-6-92  0.129
2007 Aggarwal BB, Sethi G, Baladandayuthapani V, Krishnan S, Shishodia S. Targeting cell signaling pathways for drug discovery: An old lock needs a new key Journal of Cellular Biochemistry. 102: 580-592. PMID 17668425 DOI: 10.1002/jcb.21500  0.12
2021 Qazilbash MH, Saini NY, Soung-Chul C, Wang Z, Stadtmauer E, Baladandayuthapani V, Lin H, Tross B, Honhar M, Rao SS, Kim K, Popescu M, Szymura SJ, Zhang T, Anderson AJ, et al. A Randomized Phase II Trial of Idiotype Vaccination and Adoptive Autologous T-Cell Transfer in Multiple Myeloma patients. Blood. PMID 34521108 DOI: 10.1182/blood.2020008493  0.112
2022 Bhattacharyya R, Burman A, Singh K, Banerjee S, Maity S, Auddy A, Rout SK, Lahoti S, Panda R, Baladandayuthapani V. Role of multiresolution vulnerability indices in COVID-19 spread in India: a Bayesian model-based analysis. Bmj Open. 12: e056292. PMID 36396323 DOI: 10.1136/bmjopen-2021-056292  0.111
2012 Zheng Y, Yang J, Qian J, Zhang L, Lu Y, Li H, Lin H, Lan Y, Liu Z, He J, Hong S, Thomas S, Shah J, Baladandayuthapani V, Kwak LW, et al. Novel phosphatidylinositol 3-kinase inhibitor NVP-BKM120 induces apoptosis in myeloma cells and shows synergistic anti-myeloma activity with dexamethasone Journal of Molecular Medicine. 90: 695-706. PMID 22207485 DOI: 10.1007/s00109-011-0849-9  0.109
2015 Guha S, Banerjee S, Gu C, Baladandayuthapani V. Nonparametric variable selection, clustering and prediction for large biological datasets Nonparametric Bayesian Inference in Biostatistics. 175-192. DOI: 10.1007/978-3-319-19518-6_9  0.098
2008 Nanda U, Eisen SL, Baladandayuthapani V. Undertaking an art survey to compare patient versus student art preferences Environment and Behavior. 40: 269-301. DOI: 10.1177/0013916507311552  0.096
2015 Pemmaraju N, Shah D, Kantarjian H, Orlowski RZ, Nogueras González GM, Baladandayuthapani V, Jain N, Wagner V, Garcia-Manero G, Shah J, Ravandi F, Pierce S, Takahashi K, Daver N, Nazha A, et al. Characteristics and outcomes of patients with multiple myeloma who develop therapy-related myelodysplastic syndrome, chronic myelomonocytic leukemia, or acute myeloid leukemia. Clinical Lymphoma, Myeloma & Leukemia. 15: 110-4. PMID 25107338 DOI: 10.1016/j.clml.2014.07.001  0.094
2017 Meraz I, Majidi M, Cao X, Lin H, Li L, Wang J, Baladandayuthapani V, Rice D, Sepesi B, Ji L, Roth J. TUSC2 Enhances Sensitivity to Anti-PD1 in Kras Mutant Syngeneic Mouse Lung Cancer Through NK Cells Journal of Thoracic Oncology. 12: S1537. DOI: 10.1016/j.jtho.2017.06.025  0.081
2013 Ordonez C, García-García J, Garcia-Alvarado C, Cabrera W, Baladandayuthapani V, Quraishi MS. Data mining algorithms as a service in the cloud exploiting relational database systems Proceedings of the Acm Sigmod International Conference On Management of Data. 1001-1004. DOI: 10.1145/2463676.2465240  0.078
2009 Wang J, Xu J, Baladandayuthapani V. Contrast sensitivity of digital imaging display systems: Contrast threshold dependency on object type and implications for monitor quality assurance and quality control in PACS Medical Physics. 36: 3682-3692. PMID 19746801 DOI: 10.1118/1.3173816  0.074
2015 Kappadath S, Mikell J, Baladandayuthapani V, Siman W, Mourtada F, Mahvash A. Hepatocellular carcinoma tumor dose heterogeneity and response using 3D voxel-based dosimetry following 90Y-microsphere therapy Journal of Vascular and Interventional Radiology. 26: S88. DOI: 10.1016/j.jvir.2014.12.241  0.064
2015 Nute JL, Le Roux L, Chandler AG, Baladandayuthapani V, Schellingerhout D, Cody DD. Differentiation of low-attenuation intracranial hemorrhage and calcification using dual-energy computed tomography in a phantom system. Investigative Radiology. 50: 9-16. PMID 25162534 DOI: 10.1097/Rli.0000000000000089  0.063
2014 Westin JR, Chu F, Zhang M, Fayad LE, Kwak LW, Fowler N, Romaguera J, Hagemeister F, Fanale M, Samaniego F, Feng L, Baladandayuthapani V, Wang Z, Ma W, Gao Y, et al. Safety and activity of PD1 blockade by pidilizumab in combination with rituximab in patients with relapsed follicular lymphoma: A single group, open-label, phase 2 trial The Lancet Oncology. 15: 69-77. DOI: 10.1016/S1470-2045(13)70551-5  0.058
2013 Matusevich DS, Ordonez C, Baladandayuthapani V. A fast convergence clustering algorithm merging MCMC and EM methods International Conference On Information and Knowledge Management, Proceedings. 1525-1528. DOI: 10.1145/2505515.2507835  0.057
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