Year |
Citation |
Score |
2018 |
Salmon L, Ahlstrom LS, Bardwell JCA, Horowitz S. Selecting Conformational Ensembles Using Residual Electron and Anomalous Density (READ). Methods in Molecular Biology (Clifton, N.J.). 1764: 491-504. PMID 29605935 DOI: 10.1007/978-1-4939-7759-8_31 |
0.404 |
|
2017 |
Ahlstrom LS, Vorontsov II, Shi J, Miyashita O. Effect of the Crystal Environment on Side-Chain Conformational Dynamics in Cyanovirin-N Investigated through Crystal and Solution Molecular Dynamics Simulations. Plos One. 12: e0170337. PMID 28107510 DOI: 10.1371/Journal.Pone.0170337 |
0.713 |
|
2016 |
Salmon L, Ahlstrom LS, Horowitz S, Dickson A, Brooks CL, Bardwell JC. Capturing a dynamic chaperone-substrate interaction using NMR-informed molecular modeling. Journal of the American Chemical Society. PMID 27415450 DOI: 10.1021/Jacs.6B02382 |
0.397 |
|
2016 |
Horowitz S, Salmon L, Koldewey P, Ahlstrom LS, Martin R, Quan S, Afonine PV, van den Bedem H, Wang L, Xu Q, Trievel RC, Brooks CL, Bardwell JC. Visualizing chaperone-assisted protein folding. Nature Structural & Molecular Biology. PMID 27239796 DOI: 10.1038/Nsmb.3237 |
0.364 |
|
2016 |
Ahlstrom LS, Salmon L, Horowitz S, Dickson A, Brooks CL, Bardwell JC. NMR-Informed Molecular Modeling Uncovers the Conformational Landscape of Chaperone Binding with Unfolded Substrate Biophysical Journal. 110: 369a. DOI: 10.1016/J.Bpj.2015.11.1989 |
0.374 |
|
2015 |
Frank AT, Law SM, Ahlstrom LS, Brooks CL. Predicting Protein Backbone Chemical Shifts From Cα Coordinates: Extracting High Resolution Experimental Observables from Low Resolution Models. Journal of Chemical Theory and Computation. 11: 325-331. PMID 25620895 DOI: 10.1021/Ct5009125 |
0.331 |
|
2014 |
Ahlstrom LS, Miyashita O. Packing interface energetics in different crystal forms of the λ Cro dimer. Proteins. 82: 1128-41. PMID 24218107 DOI: 10.1002/Prot.24478 |
0.674 |
|
2013 |
Ahlstrom LS, Baker JL, Ehrlich K, Campbell ZT, Patel S, Vorontsov II, Tama F, Miyashita O. Network visualization of conformational sampling during molecular dynamics simulation. Journal of Molecular Graphics & Modelling. 46: 140-9. PMID 24211466 DOI: 10.1016/J.Jmgm.2013.10.003 |
0.597 |
|
2013 |
Ahlstrom LS, Dickson A, Brooks CL. Binding and folding of the small bacterial chaperone HdeA. The Journal of Physical Chemistry. B. 117: 13219-25. PMID 23738772 DOI: 10.1021/Jp403264S |
0.335 |
|
2013 |
Ahlstrom LS, Miyashita O. Comparison of a simulated λ Cro dimer conformational ensemble to its NMR models International Journal of Quantum Chemistry. 113: 518-524. DOI: 10.1002/Qua.24029 |
0.707 |
|
2012 |
Ahlstrom LS, Miyashita O. Effect of Crystal Packing on Cro Dimer Conformation Biophysical Journal. 102: 45a. DOI: 10.1016/J.Bpj.2011.11.278 |
0.738 |
|
2011 |
Ahlstrom LS, Miyashita O. Molecular simulation uncovers the conformational space of the λ Cro dimer in solution. Biophysical Journal. 101: 2516-24. PMID 22098751 DOI: 10.1016/J.Bpj.2011.10.016 |
0.724 |
|
2011 |
Ahlstrom LS, Miyashita O. Adding Dynamical Insight to X-Ray Images by Solution and Crystal Molecular Dynamics Simulation Biophysical Journal. 100: 377a. DOI: 10.1016/J.Bpj.2010.12.2245 |
0.734 |
|
2010 |
Bartels T, Ahlstrom LS, Leftin A, Kamp F, Haass C, Brown MF, Beyer K. The N-terminus of the intrinsically disordered protein α-synuclein triggers membrane binding and helix folding. Biophysical Journal. 99: 2116-24. PMID 20923645 DOI: 10.1016/J.Bpj.2010.06.035 |
0.365 |
|
2010 |
Ahlstrom LS, Miyashita O. Comparison of λ Cro Solution Ensemble To Its Open and Closed Crystal Forms Biophysical Journal. 98: 28a. DOI: 10.1016/J.Bpj.2009.12.165 |
0.707 |
|
2010 |
Bartels T, Ahlstrom LS, Leftin A, Haas C, Brown MF, Beyer K. α-Synuclein N-Terminus Elicits Vesicle Binding and Folding Nucleation Biophysical Journal. 98: 258a. DOI: 10.1016/J.Bpj.2009.12.1403 |
0.413 |
|
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