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Seth E. Frietze, Ph.D. - Publications

Affiliations: 
2007 Harvard University, Cambridge, MA, United States 
 2015- University of Vermont, Burlington, VT, United States 
Area:
Epigenetics, Cancer, Gene regulation
Website:
https://www.uvm.edu/cnhs/bhsc/profiles/seth-frietze-phd
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44 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Modahl CM, Han SX, van Thiel J, Vaz C, Dunstan NL, Frietze S, Jackson TNW, Mackessy SP, Kini RM. Distinct regulatory networks control toxin gene expression in elapid and viperid snakes. Bmc Genomics. 25: 186. PMID 38365592 DOI: 10.1186/s12864-024-10090-y  0.788
2023 Tracy KM, Prior S, Trowbridge WT, Boyd JR, Ghule PN, Frietze S, Stein JL, Stein GS, Lian JB. Bromodomain Proteins Epigenetically Regulate the Mitotically Associated lncRNA MANCR in Triple Negative Breast Cancer Cells. Critical Reviews in Eukaryotic Gene Expression. 34: 61-71. PMID 38073442 DOI: 10.1615/CritRevEukaryotGeneExpr.2023050109  0.31
2023 Boyd J, Nadeau EAW, Kogut S, Rodriguez P, Munteneau D, O'Leary T, Filler S, Lockwood B, Cahan SH, Frietze S. Transcriptomic Analysis Pipeline (TAP) for quality control and functional assessment of transcriptomes. Research Square. PMID 37886564 DOI: 10.21203/rs.3.rs-3390128/v1  0.75
2023 Ghule PN, Boyd JR, Kabala F, Fritz AJ, Bouffard NA, Gao C, Bright K, Macfarlane J, Seward DJ, Pegoraro G, Misteli T, Lian JB, Frietze S, Stein JL, van Wijnen AJ, et al. Spatiotemporal higher-order chromatin landscape of human histone gene clusters at histone locus bodies during the cell cycle in breast cancer progression. Gene. 872: 147441. PMID 37094694 DOI: 10.1016/j.gene.2023.147441  0.306
2023 Fritz AJ, Ghule PN, Toor R, Dillac L, Perelman J, Boyd J, Lian JB, Gordon JAR, Frietze S, Van Wijnen A, Stein JL, Stein GS. Spatiotemporal Epigenetic Control of the Histone Gene Chromatin Landscape during the Cell Cycle. Critical Reviews in Eukaryotic Gene Expression. 33: 85-97. PMID 37017672 DOI: 10.1615/CritRevEukaryotGeneExpr.2022046190  0.333
2022 El Dika M, Fritz AJ, Toor RH, Rodriguez PD, Foley SJ, Ullah R, Nie D, Banerjee B, Lohese D, Tracy KM, Glass KC, Frietze S, Ghule PN, Heath JL, Imbalzano AN, et al. Epigenetic-Mediated Regulation of Gene Expression for Biological Control and Cancer: Fidelity of Mechanisms Governing the Cell Cycle. Results and Problems in Cell Differentiation. 70: 375-396. PMID 36348115 DOI: 10.1007/978-3-031-06573-6_13  0.789
2022 Fritz AJ, El Dika M, Toor RH, Rodriguez PD, Foley SJ, Ullah R, Nie D, Banerjee B, Lohese D, Tracy KM, Glass KC, Frietze S, Ghule PN, Heath JL, Imbalzano AN, et al. Epigenetic-Mediated Regulation of Gene Expression for Biological Control and Cancer: Cell and Tissue Structure, Function, and Phenotype. Results and Problems in Cell Differentiation. 70: 339-373. PMID 36348114 DOI: 10.1007/978-3-031-06573-6_12  0.795
2022 Kogut S, Paculova H, Rodriguez P, Boyd J, Richman A, Palaria A, Schjerven H, Frietze S. Ikaros Regulates microRNA Networks in Acute Lymphoblastic Leukemia. Epigenomes. 6. PMID 36278683 DOI: 10.3390/epigenomes6040037  0.762
2021 Boyd J, Rodriguez P, Schjerven H, Frietze S. ssvQC: an integrated CUT&RUN quality control workflow for histone modifications and transcription factors. Bmc Research Notes. 14: 366. PMID 34544495 DOI: 10.1186/s13104-021-05781-8  0.777
2021 Bubak AN, Mescher T, Mariani M, Frietze SE, Hassell JE, Niemeyer CS, Como CN, Burnet AM, Subramanian PS, Cohrs RJ, Mahalingam R, Nagel MA. Targeted RNA Sequencing of Formalin-Fixed, Paraffin-Embedded Temporal Arteries From Giant Cell Arteritis Cases Reveals Viral Signatures. Neurology(R) Neuroimmunology & Neuroinflammation. 8. PMID 34493606 DOI: 10.1212/NXI.0000000000001078  0.728
2021 Boyson SP, Gao C, Quinn K, Boyd J, Paculova H, Frietze S, Glass KC. Functional Roles of Bromodomain Proteins in Cancer. Cancers. 13. PMID 34298819 DOI: 10.3390/cancers13143606  0.319
2021 Rodriguez PD, Mariani M, Gay J, Hogan TC, Amiel E, Deming PB, Frietze S. A guided-inquiry investigation of genetic variants using Oxford nanopore sequencing for an undergraduate molecular biology laboratory course. Biochemistry and Molecular Biology Education : a Bimonthly Publication of the International Union of Biochemistry and Molecular Biology. PMID 33939256 DOI: 10.1002/bmb.21514  0.753
2021 Rodriguez PD, Paculova H, Kogut S, Heath J, Schjerven H, Frietze S. Non-Coding RNA Signatures of B-Cell Acute Lymphoblastic Leukemia. International Journal of Molecular Sciences. 22. PMID 33799946 DOI: 10.3390/ijms22052683  0.769
2021 Mariani M, Zimmerman C, Rodriguez P, Hasenohr E, Aimola G, Gerrard DL, Richman A, Dest A, Flamand L, Kaufer B, Frietze S. Higher-Order Chromatin Structures of Chromosomally Integrated HHV-6A Predict Integration Sites. Frontiers in Cellular and Infection Microbiology. 11: 612656. PMID 33718266 DOI: 10.3389/fcimb.2021.612656  0.711
2020 Lloyd JT, McLaughlin K, Lubula MY, Gay JC, Dest A, Gao C, Phillips M, Tonelli M, Cornilescu G, Marunde MR, Evans CM, Boyson SP, Carlson S, Keogh MC, Markley JL, ... Frietze S, et al. Structural Insights into the Recognition of Mono- and Diacetylated Histones by the ATAD2B Bromodomain. Journal of Medicinal Chemistry. PMID 33084328 DOI: 10.1021/acs.jmedchem.0c01178  0.766
2020 Bolf EL, Gillis NE, Davidson CD, Rodriguez PD, Cozzens L, Tomczak JA, Frietze S, Carr FE. THYROID HORMONE RECEPTOR BETA INDUCES A TUMOR SUPPRESSIVE PROGRAM IN ANAPLASTIC THYROID CANCER. Molecular Cancer Research : McR. PMID 32554601 DOI: 10.1158/1541-7786.MCR-20-0282  0.764
2020 Zhou Y, Gerrard DL, Wang J, Li T, Yang Y, Fritz AJ, Rajendran M, Fu X, Stein G, Schiff R, Lin S, Frietze S, Jin VX. Author Correction: Temporal dynamic reorganization of 3D chromatin architecture in hormone-induced breast cancer and endocrine resistance. Nature Communications. 11: 1967. PMID 32313124 DOI: 10.1038/S41467-020-15789-6  0.742
2019 Gerrard DL, Boyd JR, Stein GS, Jin VX, Frietze S. Disruption of Broad Epigenetic Domains in PDAC Cells by HAT Inhibitors. Epigenomes. 3. PMID 31815011 DOI: 10.3390/epigenomes3020011  0.783
2019 Saviola AJ, Zimmermann C, Mariani MP, Signorelli SA, Gerrard DL, Boyd JR, Wight DJ, Morissette G, Gravel A, Dubuc I, Flamand L, Kaufer BB, Frietze S. Chromatin Profiles of Chromosomally Integrated Human Herpesvirus-6A. Frontiers in Microbiology. 10: 1408. PMID 31293546 DOI: 10.3389/Fmicb.2019.01408  0.78
2019 Washington SD, Singh P, Johns RN, Edwards TG, Mariani M, Frietze S, Bloom DC, Neumann DM. The CCCTC binding factor, CTRL2, modulates heterochromatin deposition and the establishment of HSV-1 latency . Journal of Virology. PMID 30996085 DOI: 10.1128/Jvi.00415-19  0.781
2019 Zhou Y, Gerrard DL, Wang J, Li T, Yang Y, Fritz AJ, Rajendran M, Fu X, Schiff R, Lin S, Frietze S, Jin VX. Temporal dynamic reorganization of 3D chromatin architecture in hormone-induced breast cancer and endocrine resistance. Nature Communications. 10: 1522. PMID 30944316 DOI: 10.1038/S41467-019-09320-9  0.773
2018 Gerrard DL, Wang Y, Gaddis M, Zhou Y, Wang J, Witt H, Lin S, Farnham PJ, Jin VX, Frietze SE. Three-dimensional analysis reveals altered chromatin interaction by enhancer inhibitors harbors TCF7L2-regulated cancer gene signature. Journal of Cellular Biochemistry. PMID 30548288 DOI: 10.1002/Jcb.27449  0.813
2018 Modahl CM, Frietze SE, Mackessy SP. Transcriptome-facilitated proteomic characterization of rear-fanged snake venoms reveal abundant metalloproteinases with enhanced activity. Journal of Proteomics. PMID 30092380 DOI: 10.1016/j.jprot.2018.08.004  0.777
2018 Modahl CM, Mrinalini, Frietze S, Mackessy SP. Adaptive evolution of distinct prey-specific toxin genes in rear-fanged snake venom. Proceedings. Biological Sciences. 285. PMID 30068680 DOI: 10.1098/rspb.2018.1003  0.78
2018 Van Nieuwenhove E, Garcia-Perez JE, Helsen C, Rodriguez PD, van Schouwenburg PA, Dooley J, Schlenner S, van der Burg M, Verhoeyen E, Gijsbers R, Frietze S, Schjerven H, Meyts I, Claessens F, Humblet-Baron S, et al. A kindred with Mutant IKAROS and autoimmunity. The Journal of Allergy and Clinical Immunology. PMID 29705243 DOI: 10.1016/j.jaci.2018.04.008  0.778
2017 Pla D, Petras D, Saviola AJ, Modahl CM, Sanz L, Pérez A, Juárez E, Frietze S, Dorrestein PC, Mackessy SP, Calvete JJ. Transcriptomics-guided bottom-up and top-down venomics of neonate and adult specimens of the arboreal rear-fanged Brown Treesnake, Boiga irregularis, from Guam. Journal of Proteomics. 174: 71-84. PMID 29292096 DOI: 10.1016/J.Jprot.2017.12.020  0.767
2017 Gerrard DL, Hawkinson A, Sherman T, Modahl CM, Hume G, Campbell CL, Schountz T, Frietze S. Transcriptomic Signatures of Tacaribe Virus-Infected Jamaican Fruit Bats. Msphere. 2. PMID 28959737 DOI: 10.1128/mSphere.00245-17  0.759
2017 Zaidi SK, Frietze SE, Gordon JA, Heath JL, Messier T, Hong D, Boyd JR, Kang M, Imbalzano AN, Lian JB, Stein JL, Stein GS. Bivalent Epigenetic Control of Oncofetal Gene Expression in Cancer. Molecular and Cellular Biology. PMID 28923849 DOI: 10.1128/Mcb.00352-17  0.326
2017 Fritz AJ, Ghule PN, Boyd JR, Tye CE, Page NA, Hong D, Weinheimer AS, Barutcu AR, Gerrard DL, Frietze S, Zaidi SK, Imbalzano A, Lian JB, Stein JL, Stein GS. Intranuclear and higher-order chromatin organization of the major histone gene cluster in breast cancer. Journal of Cellular Physiology. PMID 28504305 DOI: 10.1002/Jcp.25996  0.781
2015 Gaddis M, Gerrard D, Frietze S, Farnham PJ. Altering cancer transcriptomes using epigenomic inhibitors. Epigenetics & Chromatin. 8: 9. PMID 26191083 DOI: 10.1186/1756-8935-8-9  0.798
2014 Frietze S, O'Geen H, Littlepage LE, Simion C, Sweeney CA, Farnham PJ, Krig SR. Global analysis of ZNF217 chromatin occupancy in the breast cancer cell genome reveals an association with ERalpha. Bmc Genomics. 15: 520. PMID 24962896 DOI: 10.1186/1471-2164-15-520  0.632
2013 Schjerven H, McLaughlin J, Arenzana TL, Frietze S, Cheng D, Wadsworth SE, Lawson GW, Bensinger SJ, Farnham PJ, Witte ON, Smale ST. Selective regulation of lymphopoiesis and leukemogenesis by individual zinc fingers of Ikaros. Nature Immunology. 14: 1073-83. PMID 24013668 DOI: 10.1038/Ni.2707  0.612
2012 Gerstein MB, Kundaje A, Hariharan M, Landt SG, Yan KK, Cheng C, Mu XJ, Khurana E, Rozowsky J, Alexander R, Min R, Alves P, Abyzov A, Addleman N, Bhardwaj N, ... ... Frietze S, et al. Architecture of the human regulatory network derived from ENCODE data. Nature. 489: 91-100. PMID 22955619 DOI: 10.1038/Nature11245  0.614
2012 Frietze S, Wang R, Yao L, Tak YG, Ye Z, Gaddis M, Witt H, Farnham PJ, Jin VX. Cell type-specific binding patterns reveal that TCF7L2 can be tethered to the genome by association with GATA3. Genome Biology. 13: R52. PMID 22951069 DOI: 10.1186/Gb-2012-13-9-R52  0.643
2012 Yusuf D, Butland SL, Swanson MI, Bolotin E, Ticoll A, Cheung WA, Zhang XY, Dickman CT, Fulton DL, Lim JS, Schnabl JM, Ramos OH, Vasseur-Cognet M, de Leeuw CN, Simpson EM, ... ... Frietze S, et al. The transcription factor encyclopedia. Genome Biology. 13: R24. PMID 22458515 DOI: 10.1186/Gb-2012-13-3-R24  0.548
2011 Frietze S, Farnham PJ. Transcription factor effector domains. Sub-Cellular Biochemistry. 52: 261-77. PMID 21557087 DOI: 10.1007/978-90-481-9069-0_12  0.642
2010 Frietze S, O'Geen H, Blahnik KR, Jin VX, Farnham PJ. ZNF274 recruits the histone methyltransferase SETDB1 to the 3' ends of ZNF genes. Plos One. 5: e15082. PMID 21170338 DOI: 10.1371/Journal.Pone.0015082  0.809
2010 O'Geen H, Lin YH, Xu X, Echipare L, Komashko VM, He D, Frietze S, Tanabe O, Shi L, Sartor MA, Engel JD, Farnham PJ. Genome-wide binding of the orphan nuclear receptor TR4 suggests its general role in fundamental biological processes. Bmc Genomics. 11: 689. PMID 21126370 DOI: 10.1186/1471-2164-11-689  0.796
2010 O'Geen H, Frietze S, Farnham PJ. Using ChIP-seq technology to identify targets of zinc finger transcription factors. Methods in Molecular Biology (Clifton, N.J.). 649: 437-55. PMID 20680851 DOI: 10.1007/978-1-60761-753-2_27  0.611
2010 Krig SR, Miller JK, Frietze S, Beckett LA, Neve RM, Farnham PJ, Yaswen PI, Sweeney CA. ZNF217, a candidate breast cancer oncogene amplified at 20q13, regulates expression of the ErbB3 receptor tyrosine kinase in breast cancer cells. Oncogene. 29: 5500-10. PMID 20661224 DOI: 10.1038/Onc.2010.289  0.588
2010 Frietze S, Lan X, Jin VX, Farnham PJ. Genomic targets of the KRAB and SCAN domain-containing zinc finger protein 263. The Journal of Biological Chemistry. 285: 1393-403. PMID 19887448 DOI: 10.1074/Jbc.M109.063032  0.627
2008 Frietze S, Lupien M, Silver PA, Brown M. CARM1 regulates estrogen-stimulated breast cancer growth through up-regulation of E2F1. Cancer Research. 68: 301-6. PMID 18172323 DOI: 10.1158/0008-5472.Can-07-1983  0.593
2006 Auld KL, Hitchcock AL, Doherty HK, Frietze S, Huang LS, Silver PA. The conserved ATPase Get3/Arr4 modulates the activity of membrane-associated proteins in Saccharomyces cerevisiae. Genetics. 174: 215-27. PMID 16816426 DOI: 10.1534/Genetics.106.058362  0.744
2001 Hitchcock AL, Krebber H, Frietze S, Lin A, Latterich M, Silver PA. The conserved npl4 protein complex mediates proteasome-dependent membrane-bound transcription factor activation. Molecular Biology of the Cell. 12: 3226-41. PMID 11598205 DOI: 10.1091/Mbc.12.10.3226  0.773
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