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Charles P. Neff, Ph.D. - Publications

Affiliations: 
2011 Cell and Molecular Biology (Graduate Degree Program) Colorado State University, Fort Collins, CO 
Area:
Virology Biology, Cell Biology, Microbiology Biology
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20 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Burkhart Colorado AS, Lazzaro A, Neff CP, Nusbacher N, Boyd K, Fiorillo S, Martin C, Siebert JC, Campbell TB, Borok M, Palmer BE, Lozupone C. Differential effects of antiretroviral treatment on immunity and gut microbiome composition in people living with HIV in rural versus urban Zimbabwe. Microbiome. 12: 18. PMID 38310301 DOI: 10.1186/s40168-023-01718-4  0.419
2023 Lazzaro A, Colorado ASB, Neff CP, Nusbacher N, Boyd K, Fiorillo S, Martin C, Siebert J, Campbell T, Borok M, Palmer B, Lozupone C. Antiretroviral treatment is less effective at reducing gut microbiome-associated inflammation and T cell activation in people living with HIV in rural versus urban Zimbabwe. Research Square. PMID 37693491 DOI: 10.21203/rs.3.rs-3300723/v1  0.444
2022 Littlefield KM, Schneider JM, Neff CP, Soesanto V, Siebert JC, Nusbacher NM, Moreno-Huizar N, Cartwright IM, Armstrong AJS, Colgen SP, Lozupone CA, Palmer BE. Elevated inflammatory fecal immune factors in men who have sex with men with HIV associate with microbiome composition and gut barrier function. Frontiers in Immunology. 13: 1072720. PMID 36605218 DOI: 10.3389/fimmu.2022.1072720  0.468
2020 Neff CP, Atif SM, Logue EC, Siebert J, Görg C, Lavelle J, Fiorillo S, Twigg H, Campbell TB, Fontenot AP, Palmer BE. HIV Infection Is Associated with Loss of Anti-Inflammatory Alveolar Macrophages. Journal of Immunology (Baltimore, Md. : 1950). PMID 32929038 DOI: 10.4049/jimmunol.2000361  0.534
2019 Siebert JC, Neff CP, Schneider JM, Regner EH, Ohri N, Kuhn KA, Palmer BE, Lozupone CA, Görg C. VOLARE: visual analysis of disease-associated microbiome-immune system interplay. Bmc Bioinformatics. 20: 432. PMID 31429723 DOI: 10.1186/S12859-019-3021-0  0.3
2019 Li SX, Sen S, Schneider JM, Xiong KN, Nusbacher NM, Moreno-Huizar N, Shaffer M, Armstrong AJS, Severs E, Kuhn K, Neff CP, McCarter M, Campbell T, Lozupone CA, Palmer BE. Gut microbiota from high-risk men who have sex with men drive immune activation in gnotobiotic mice and in vitro HIV infection. Plos Pathogens. 15: e1007611. PMID 30947289 DOI: 10.1371/Journal.Ppat.1007611  0.649
2018 Neff CP, Krueger O, Xiong K, Arif S, Nusbacher N, Schneider JM, Cunningham AW, Armstrong A, Li S, McCarter MD, Campbell TB, Lozupone CA, Palmer BE. Fecal Microbiota Composition Drives Immune Activation in HIV-infected Individuals. Ebiomedicine. 30: 192-202. PMID 29650491 DOI: 10.1016/j.ebiom.2018.03.024  0.541
2016 Hu S, Neff CP, Kumar DM, Habu Y, Akkina SR, Seki T, Akkina R. A humanized mouse model for HIV-2 infection and efficacy testing of a single-pill triple-drug combination anti-retroviral therapy. Virology. 501: 115-118. PMID 27912079 DOI: 10.1016/J.Virol.2016.11.013  0.794
2016 Li SX, Armstrong AJ, Neff CP, Shaffer M, Lozupone CA, Palmer BE. Complexities of gut microbiome dysbiosis in the context of HIV infection and antiretroviral therapy. Clinical Pharmacology and Therapeutics. PMID 26940481 DOI: 10.1002/cpt.363  0.629
2015 Akhmetzyanova I, Drabczyk M, Neff CP, Gibbert K, Dietze KK, Werner T, Liu J, Chen L, Lang KS, Palmer BE, Dittmer U, Zelinskyy G. Correction: PD-L1 Expression on Retrovirus-Infected Cells Mediates Immune Escape from CD8+ T Cell Killing. Plos Pathogens. 11: e1005364. PMID 26684741 DOI: 10.1371/Journal.Ppat.1005364  0.329
2015 Akhmetzyanova I, Drabczyk M, Neff CP, Gibbert K, Dietze KK, Werner T, Liu J, Chen L, Lang KS, Palmer BE, Dittmer U, Zelinskyy G. PD-L1 Expression on Retrovirus-Infected Cells Mediates Immune Escape from CD8+ T Cell Killing. Plos Pathogens. 11: e1005224. PMID 26484769 DOI: 10.1371/Journal.Ppat.1005224  0.333
2015 Neff CP, Chain JL, MaWhinney S, Martin AK, Linderman DJ, Flores SC, Campbell TB, Palmer BE, Fontenot AP. Lymphocytic alveolitis is associated with the accumulation of functionally impaired HIV-specific T cells in the lung of antiretroviral therapy-naive subjects. American Journal of Respiratory and Critical Care Medicine. 191: 464-73. PMID 25536276 DOI: 10.1164/Rccm.201408-1521Oc  0.505
2014 Lozupone CA, Rhodes ME, Neff CP, Fontenot AP, Campbell TB, Palmer BE. HIV-induced alteration in gut microbiota: driving factors, consequences, and effects of antiretroviral therapy. Gut Microbes. 5: 562-70. PMID 25078714 DOI: 10.4161/gmic.32132  0.549
2013 Palmer BE, Neff CP, LeCureux J, Ehler A, DSouza M, Remling-Mulder L, Korman AJ, Fontenot AP, Akkina R. In vivo blockade of the PD-1 receptor suppresses HIV-1 viral loads and improves CD4+ T cell levels in humanized mice Journal of Immunology. 190: 211-219. PMID 23209326 DOI: 10.4049/Jimmunol.1201108  0.73
2013 Zhou J, Neff CP, Swiderski P, Li H, Smith DD, Aboellail T, Remling-Mulder L, Akkina R, Rossi JJ. Functional in vivo delivery of multiplexed anti-HIV-1 siRNAs via a chemically synthesized aptamer with a sticky bridge. Molecular Therapy : the Journal of the American Society of Gene Therapy. 21: 192-200. PMID 23164935 DOI: 10.1038/Mt.2012.226  0.731
2011 Zhou J, Neff CP, Liu X, Zhang J, Li H, Smith DD, Swiderski P, Aboellail T, Huang Y, Du Q, Liang Z, Peng L, Akkina R, Rossi JJ. Systemic administration of combinatorial dsiRNAs via nanoparticles efficiently suppresses HIV-1 infection in humanized mice. Molecular Therapy : the Journal of the American Society of Gene Therapy. 19: 2228-38. PMID 21952167 DOI: 10.1038/Mt.2011.207  0.802
2011 Akkina R, Berges BK, Palmer BE, Remling L, Neff CP, Kuruvilla J, Connick E, Folkvord J, Gagliardi K, Kassu A, Akkina SR. Humanized Rag1-/-γc-/- mice support multilineage hematopoiesis and are susceptible to HIV-1 infection via systemic and vaginal routes Plos One. 6. PMID 21695116 DOI: 10.1371/Journal.Pone.0020169  0.621
2011 Neff CP, Kurisu T, Ndolo T, Fox K, Akkina R. A topical microbicide gel formulation of CCR5 antagonist maraviroc prevents HIV-1 vaginal transmission in humanized RAG-hu mice Plos One. 6. PMID 21673796 DOI: 10.1371/Journal.Pone.0020209  0.778
2011 Neff CP, Zhou J, Remling L, Kuruvilla J, Zhang J, Li H, Smith DD, Swiderski P, Rossi JJ, Akkina R. An aptamer-siRNA chimera suppresses HIV-1 viral loads and protects from helper CD4(+) T cell decline in humanized mice. Science Translational Medicine. 3: 66ra6. PMID 21248316 DOI: 10.1126/Scitranslmed.3001581  0.643
2009 Zhou J, Swiderski P, Li H, Zhang J, Neff CP, Akkina R, Rossi JJ. Selection, characterization and application of new RNA HIV gp 120 aptamers for facile delivery of Dicer substrate siRNAs into HIV infected cells Nucleic Acids Research. 37: 3094-3109. PMID 19304999 DOI: 10.1093/Nar/Gkp185  0.757
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