| Year |
Citation |
Score |
| 2019 |
Rodrigues JV, Ogbunugafor CB, Hartl DL, Shakhnovich EI. Chimeric dihydrofolate reductases display properties of modularity and biophysical diversity. Protein Science : a Publication of the Protein Society. 28: 1359-1367. PMID 31095809 DOI: 10.1002/Pro.3646 |
0.352 |
|
| 2019 |
Tomala K, Zrebiec P, Hartl DL. Limits to compensatory mutations: Insights from temperature-sensitive alleles. Molecular Biology and Evolution. PMID 31058959 DOI: 10.1093/Molbev/Msz110 |
0.304 |
|
| 2019 |
Guerrero RF, Scarpino SV, Rodrigues JV, Hartl DL, Ogbunugafor CB. Proteostasis Environment Shapes Higher-Order Epistasis Operating on Antibiotic Resistance. Genetics. PMID 31015194 DOI: 10.1534/Genetics.119.302138 |
0.362 |
|
| 2019 |
Hartl DL, Jungen H. ESTIMATION OF AVERAGE FITNESS OF POPULATIONS OF DROSOPHILA MELANOGASTER AND THE EVOLUTION OF FITNESS IN EXPERIMENTAL POPULATIONS. Evolution; International Journal of Organic Evolution. 33: 371-380. PMID 28568191 DOI: 10.1111/J.1558-5646.1979.Tb04690.X |
0.307 |
|
| 2019 |
Jungen H, Hartl DL. AVERAGE FITNESS OF POPULATIONS OF DROSOPHILA MELANOGASTER AS ESTIMATED USING COMPOUND-AUTOSOME STRAINS. Evolution; International Journal of Organic Evolution. 33: 359-370. PMID 28568182 DOI: 10.1111/J.1558-5646.1979.Tb04689.X |
0.32 |
|
| 2019 |
Hartl DL. ANALYSIS OF A GENERAL POPULATION GENETIC MODEL OF MEIOTIC DRIVE. Evolution; International Journal of Organic Evolution. 24: 538-545. PMID 28562989 DOI: 10.1111/J.1558-5646.1970.Tb01789.X |
0.358 |
|
| 2018 |
Demas AR, Sharma AI, Wong W, Early AM, Redmond S, Bopp S, Neafsey DE, Volkman SK, Hartl DL, Wirth DF. Mutations in actin-binding protein coronin confer reduced artemisinin susceptibility. Proceedings of the National Academy of Sciences of the United States of America. PMID 30420498 DOI: 10.1073/Pnas.1812317115 |
0.646 |
|
| 2018 |
Redmond SN, MacInnis BM, Bopp S, Bei AK, Ndiaye D, Hartl DL, Wirth DF, Volkman SK, Neafsey DE. De Novo Mutations Resolve Disease Transmission Pathways in Clonal Malaria. Molecular Biology and Evolution. PMID 29722884 DOI: 10.1093/Molbev/Msy059 |
0.633 |
|
| 2018 |
Bei AK, Niang M, Deme AB, Daniels RF, Sarr FD, Sokhna C, Talla C, Faye J, Diagne N, Doucoure S, Mboup S, Wirth DF, Tall A, Ndiaye D, Hartl DL, et al. Dramatic Changes in Malaria Population Genetic Complexity in Dielmo and Ndiop, Senegal, Revealed Using Genomic Surveillance. The Journal of Infectious Diseases. PMID 29325146 DOI: 10.1093/Infdis/Jix580 |
0.324 |
|
| 2017 |
Wong W, Griggs AD, Daniels RF, Schaffner SF, Ndiaye D, Bei AK, Deme AB, MacInnis B, Volkman SK, Hartl DL, Neafsey DE, Wirth DF. Genetic relatedness analysis reveals the cotransmission of genetically related Plasmodium falciparum parasites in Thiès, Senegal. Genome Medicine. 9: 5. PMID 28118860 DOI: 10.1186/S13073-017-0398-0 |
0.6 |
|
| 2016 |
Volkman SK, Herman J, Lukens AK, Hartl DL. Genome-Wide Association Studies of Drug-Resistance Determinants. Trends in Parasitology. PMID 28179098 DOI: 10.1016/J.Pt.2016.10.001 |
0.301 |
|
| 2016 |
Ogbunugafor CB, Hartl DL. A New Take on John Maynard Smith's Concept of Protein Space for Understanding Molecular Evolution. Plos Computational Biology. 12: e1005046. PMID 27736867 DOI: 10.1371/Journal.Pcbi.1005046 |
0.323 |
|
| 2016 |
Molina-Cruz A, Zilversmit MM, Neafsey DE, Hartl DL, Barillas-Mury C. Mosquito Vectors and the Globalization of Plasmodium falciparum Malaria. Annual Review of Genetics. PMID 27732796 DOI: 10.1146/Annurev-Genet-120215-035211 |
0.596 |
|
| 2016 |
Sackton TB, Hartl DL. Genotypic Context and Epistasis in Individuals and Populations. Cell. 166: 279-87. PMID 27419868 DOI: 10.1016/J.Cell.2016.06.047 |
0.709 |
|
| 2016 |
Liénard MA, Araripe LO, Hartl DL. Neighboring genes for DNA-binding proteins rescue male sterility in Drosophila hybrids. Proceedings of the National Academy of Sciences of the United States of America. PMID 27357670 DOI: 10.1073/Pnas.1608337113 |
0.4 |
|
| 2016 |
Rodrigues JV, Bershtein S, Li A, Lozovsky ER, Hartl DL, Shakhnovich EI. Biophysical principles predict fitness landscapes of drug resistance. Proceedings of the National Academy of Sciences of the United States of America. PMID 26929328 DOI: 10.1073/Pnas.1601441113 |
0.3 |
|
| 2016 |
Ogbunugafor CB, Wylie CS, Diakite I, Weinreich DM, Hartl DL. Adaptive Landscape by Environment Interactions Dictate Evolutionary Dynamics in Models of Drug Resistance. Plos Computational Biology. 12: e1004710. PMID 26808374 DOI: 10.1371/Journal.Pcbi.1004710 |
0.602 |
|
| 2016 |
Ogbunugafor CB, Hartl D. A pivot mutation impedes reverse evolution across an adaptive landscape for drug resistance in Plasmodium vivax Malaria Journal. DOI: 10.1186/S12936-016-1090-3 |
0.314 |
|
| 2015 |
Daniels R, Hamilton EJ, Durfee K, Ndiaye D, Wirth DF, Hartl DL, Volkman SK. Methods to Increase the Sensitivity of High Resolution Melting Single Nucleotide Polymorphism Genotyping in Malaria. Journal of Visualized Experiments : Jove. PMID 26575471 DOI: 10.3791/52839 |
0.315 |
|
| 2015 |
Corbett-Detig R, Jacobs-Palmer E, Hartl D, Hoekstra H. Direct Gamete Sequencing Reveals No Evidence for Segregation Distortion in House Mouse Hybrids. Plos One. 10: e0131933. PMID 26121240 DOI: 10.1371/Journal.Pone.0131933 |
0.67 |
|
| 2015 |
Ayroles JF, Buchanan SM, O'Leary C, Skutt-Kakaria K, Grenier JK, Clark AG, Hartl DL, de Bivort BL. Behavioral idiosyncrasy reveals genetic control of phenotypic variability. Proceedings of the National Academy of Sciences of the United States of America. 112: 6706-11. PMID 25953335 DOI: 10.1073/Pnas.1503830112 |
0.479 |
|
| 2015 |
Daniels RF, Schaffner SF, Wenger EA, Proctor JL, Chang HH, Wong W, Baro N, Ndiaye D, Fall FB, Ndiop M, Ba M, Milner DA, Taylor TE, Neafsey DE, Volkman SK, ... ... Hartl DL, et al. Modeling malaria genomics reveals transmission decline and rebound in Senegal. Proceedings of the National Academy of Sciences of the United States of America. 112: 7067-72. PMID 25941365 DOI: 10.1073/Pnas.1505691112 |
0.622 |
|
| 2015 |
Daniels RF, Rice BL, Daniels NM, Volkman SK, Hartl DL. The utility of genomic data for Plasmodium vivax population surveillance. Pathogens and Global Health. 109: 153-61. PMID 25892032 DOI: 10.1179/2047773215Y.0000000014 |
0.341 |
|
| 2015 |
Corbett-Detig RB, Hartl DL, Sackton TB. Natural selection constrains neutral diversity across a wide range of species. Plos Biology. 13: e1002112. PMID 25859758 DOI: 10.1371/Journal.Pbio.1002112 |
0.801 |
|
| 2015 |
Galinsky K, Valim C, Salmier A, de Thoisy B, Musset L, Legrand E, Faust A, Baniecki ML, Ndiaye D, Daniels RF, Hartl DL, Sabeti PC, Wirth DF, Volkman SK, Neafsey DE. COIL: a methodology for evaluating malarial complexity of infection using likelihood from single nucleotide polymorphism data. Malaria Journal. 14: 4. PMID 25599890 DOI: 10.1186/1475-2875-14-4 |
0.594 |
|
| 2015 |
Chang HH, Hartl DL. Recurrent bottlenecks in the malaria life cycle obscure signals of positive selection. Parasitology. 142: S98-S107. PMID 24560397 DOI: 10.1017/S0031182014000067 |
0.325 |
|
| 2015 |
Volkman S, Daniels R, Chang H, Park D, Neafsey D, Schaffner S, Lukens A, Mboup S, Sabeti P, Wirth D, Hartl D. Genotyping malaria parasites to understand malaria transmission Annals of Global Health. 81: 82. DOI: 10.1016/J.Aogh.2015.02.694 |
0.553 |
|
| 2014 |
Hartl DL. What can we learn from fitness landscapes? Current Opinion in Microbiology. 21: 51-7. PMID 25444121 DOI: 10.1016/J.Mib.2014.08.001 |
0.378 |
|
| 2014 |
Sackton TB, Corbett-Detig RB, Nagaraju J, Vaishna L, Arunkumar KP, Hartl DL. Positive selection drives faster-Z evolution in silkmoths. Evolution; International Journal of Organic Evolution. 68: 2331-42. PMID 24826901 DOI: 10.1111/Evo.12449 |
0.802 |
|
| 2014 |
Lemos B, Branco AT, Jiang PP, Hartl DL, Meiklejohn CD. Genome-wide gene expression effects of sex chromosome imprinting in Drosophila. G3 (Bethesda, Md.). 4: 1-10. PMID 24318925 DOI: 10.1534/G3.113.008029 |
0.782 |
|
| 2014 |
Meiklejohn CD, Coolon JD, Hartl DL, Wittkopp PJ. The roles of cis- and trans-regulation in the evolution of regulatory incompatibilities and sexually dimorphic gene expression. Genome Research. 24: 84-95. PMID 24043293 DOI: 10.1101/Gr.156414.113 |
0.755 |
|
| 2014 |
Hartl DL, Temin RG. James Franklin Crow. 18 January 1916 — 4 January 2012 Biographical Memoirs of Fellows of the Royal Society. 60: 151-167. DOI: 10.1098/Rsbm.2014.0004 |
0.778 |
|
| 2013 |
Chang HH, Moss EL, Park DJ, Ndiaye D, Mboup S, Volkman SK, Sabeti PC, Wirth DF, Neafsey DE, Hartl DL. Malaria life cycle intensifies both natural selection and random genetic drift. Proceedings of the National Academy of Sciences of the United States of America. 110: 20129-34. PMID 24259712 DOI: 10.1073/Pnas.1319857110 |
0.634 |
|
| 2013 |
Corbett-Detig RB, Zhou J, Clark AG, Hartl DL, Ayroles JF. Genetic incompatibilities are widespread within species. Nature. 504: 135-7. PMID 24196712 DOI: 10.1038/Nature12678 |
0.73 |
|
| 2013 |
Yang S, Li J, Zhang X, Zhang Q, Huang J, Chen JQ, Hartl DL, Tian D. Rapidly evolving R genes in diverse grass species confer resistance to rice blast disease. Proceedings of the National Academy of Sciences of the United States of America. 110: 18572-7. PMID 24145399 DOI: 10.1073/Pnas.1318211110 |
0.374 |
|
| 2013 |
Jiang PP, Corbett-Detig RB, Hartl DL, Lozovsky ER. Accessible mutational trajectories for the evolution of pyrimethamine resistance in the malaria parasite Plasmodium vivax. Journal of Molecular Evolution. 77: 81-91. PMID 24071997 DOI: 10.1007/S00239-013-9582-Z |
0.73 |
|
| 2013 |
Nakagawa S, Gisselbrecht SS, Rogers JM, Hartl DL, Bulyk ML. DNA-binding specificity changes in the evolution of forkhead transcription factors. Proceedings of the National Academy of Sciences of the United States of America. 110: 12349-54. PMID 23836653 DOI: 10.1073/Pnas.1310430110 |
0.304 |
|
| 2013 |
Branco AT, Hartl DL, Lemos B. Chromatin-associated proteins HP1 and Mod(mdg4) modify Y-linked regulatory variation in the drosophila testis. Genetics. 194: 609-18. PMID 23636736 DOI: 10.1534/Genetics.113.150805 |
0.421 |
|
| 2013 |
Daniels R, Chang HH, Séne PD, Park DC, Neafsey DE, Schaffner SF, Hamilton EJ, Lukens AK, Van Tyne D, Mboup S, Sabeti PC, Ndiaye D, Wirth DF, Hartl DL, Volkman SK. Genetic surveillance detects both clonal and epidemic transmission of malaria following enhanced intervention in Senegal. Plos One. 8: e60780. PMID 23593309 DOI: 10.1371/Journal.Pone.0060780 |
0.588 |
|
| 2013 |
Branco AT, Tao Y, Hartl DL, Lemos B. Natural variation of the Y chromosome suppresses sex ratio distortion and modulates testis-specific gene expression in Drosophila simulans. Heredity. 111: 8-15. PMID 23591516 DOI: 10.1038/Hdy.2013.5 |
0.378 |
|
| 2013 |
Arnold B, Corbett-Detig RB, Hartl D, Bomblies K. RADseq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling. Molecular Ecology. 22: 3179-90. PMID 23551379 DOI: 10.1111/Mec.12276 |
0.671 |
|
| 2013 |
Sackton TB, Hartl DL. Meta-analysis reveals that genes regulated by the Y chromosome in Drosophila melanogaster are preferentially localized to repressive chromatin. Genome Biology and Evolution. 5: 255-66. PMID 23315381 DOI: 10.1093/Gbe/Evt005 |
0.74 |
|
| 2012 |
Corbett-Detig RB, Hartl DL. Population genomics of inversion polymorphisms in Drosophila melanogaster. Plos Genetics. 8: e1003056. PMID 23284285 DOI: 10.1371/Journal.Pgen.1003056 |
0.69 |
|
| 2012 |
Park DJ, Lukens AK, Neafsey DE, Schaffner SF, Chang HH, Valim C, Ribacke U, Van Tyne D, Galinsky K, Galligan M, Becker JS, Ndiaye D, Mboup S, Wiegand RC, Hartl DL, et al. Sequence-based association and selection scans identify drug resistance loci in the Plasmodium falciparum malaria parasite. Proceedings of the National Academy of Sciences of the United States of America. 109: 13052-7. PMID 22826220 DOI: 10.1073/Pnas.1210585109 |
0.647 |
|
| 2012 |
Ponce R, Martinsen L, Vicente LM, Hartl DL. Novel genes from formation to function. International Journal of Evolutionary Biology. 2012: 821645. PMID 22811949 DOI: 10.1155/2012/821645 |
0.389 |
|
| 2012 |
Chang HH, Park DJ, Galinsky KJ, Schaffner SF, Ndiaye D, Ndir O, Mboup S, Wiegand RC, Volkman SK, Sabeti PC, Wirth DF, Neafsey DE, Hartl DL. Genomic sequencing of Plasmodium falciparum malaria parasites from Senegal reveals the demographic history of the population. Molecular Biology and Evolution. 29: 3427-39. PMID 22734050 DOI: 10.1093/Molbev/Mss161 |
0.677 |
|
| 2012 |
Zhou J, Sackton TB, Martinsen L, Lemos B, Eickbush TH, Hartl DL. Y chromosome mediates ribosomal DNA silencing and modulates the chromatin state in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 109: 9941-6. PMID 22665801 DOI: 10.1073/Pnas.1207367109 |
0.727 |
|
| 2012 |
Yeh SD, Do T, Chan C, Cordova A, Carranza F, Yamamoto EA, Abbassi M, Gandasetiawan KA, Librado P, Damia E, Dimitri P, Rozas J, Hartl DL, Roote J, Ranz JM. Functional evidence that a recently evolved Drosophila sperm-specific gene boosts sperm competition. Proceedings of the National Academy of Sciences of the United States of America. 109: 2043-8. PMID 22308475 DOI: 10.1073/Pnas.1121327109 |
0.748 |
|
| 2012 |
Volkman SK, Ndiaye D, Diakite M, Koita OA, Nwakanma D, Daniels RF, Park DJ, Neafsey DE, Muskavitch MA, Krogstad DJ, Sabeti PC, Hartl DL, Wirth DF. Application of genomics to field investigations of malaria by the international centers of excellence for malaria research. Acta Tropica. 121: 324-32. PMID 22182668 DOI: 10.1016/J.Actatropica.2011.12.002 |
0.597 |
|
| 2012 |
Toprak E, Veres A, Michel JB, Chait R, Hartl DL, Kishony R. Evolutionary paths to antibiotic resistance under dynamically sustained drug selection. Nature Genetics. 44: 101-5. PMID 22179135 DOI: 10.1038/Ng.1034 |
0.359 |
|
| 2012 |
Rogers RL, Hartl DL. Chimeric genes as a source of rapid evolution in Drosophila melanogaster. Molecular Biology and Evolution. 29: 517-29. PMID 21771717 DOI: 10.1093/Molbev/Msr184 |
0.64 |
|
| 2011 |
Carneiro MO, Taubes CH, Hartl DL. Model transcriptional networks with continuously varying expression levels. Bmc Evolutionary Biology. 11: 363. PMID 22182343 DOI: 10.1186/1471-2148-11-363 |
0.782 |
|
| 2011 |
Zhou J, Lemos B, Dopman EB, Hartl DL. Copy-number variation: the balance between gene dosage and expression in Drosophila melanogaster. Genome Biology and Evolution. 3: 1014-24. PMID 21979154 DOI: 10.1093/Gbe/Evr023 |
0.456 |
|
| 2011 |
Sackton TB, Montenegro H, Hartl DL, Lemos B. Interspecific Y chromosome introgressions disrupt testis-specific gene expression and male reproductive phenotypes in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 108: 17046-51. PMID 21969588 DOI: 10.1073/Pnas.1114690108 |
0.726 |
|
| 2011 |
Costanzo MS, Hartl DL. The evolutionary landscape of antifolate resistance in Plasmodium falciparum. Journal of Genetics. 90: 187-90. PMID 21869466 DOI: 10.1007/S12041-011-0072-Z |
0.316 |
|
| 2011 |
Costanzo MS, Brown KM, Hartl DL. Fitness trade-offs in the evolution of dihydrofolate reductase and drug resistance in Plasmodium falciparum. Plos One. 6: e19636. PMID 21625425 DOI: 10.1371/Journal.Pone.0019636 |
0.543 |
|
| 2011 |
Paredes S, Branco AT, Hartl DL, Maggert KA, Lemos B. Ribosomal DNA deletions modulate genome-wide gene expression: "rDNA-sensitive" genes and natural variation. Plos Genetics. 7: e1001376. PMID 21533076 DOI: 10.1371/Journal.Pgen.1001376 |
0.459 |
|
| 2011 |
Van Tyne D, Park DJ, Schaffner SF, Neafsey DE, Angelino E, Cortese JF, Barnes KG, Rosen DM, Lukens AK, Daniels RF, Milner DA, Johnson CA, Shlyakhter I, Grossman SR, Becker JS, ... ... Hartl DL, et al. Identification and functional validation of the novel antimalarial resistance locus PF10_0355 in Plasmodium falciparum. Plos Genetics. 7: e1001383. PMID 21533027 DOI: 10.1371/Journal.Pgen.1001383 |
0.645 |
|
| 2011 |
Geiler-Samerotte KA, Dion MF, Budnik BA, Wang SM, Hartl DL, Drummond DA. Misfolded proteins impose a dosage-dependent fitness cost and trigger a cytosolic unfolded protein response in yeast. Proceedings of the National Academy of Sciences of the United States of America. 108: 680-5. PMID 21187411 DOI: 10.1073/Pnas.1017570108 |
0.776 |
|
| 2010 |
Araripe LO, Montenegro H, Lemos B, Hartl DL. Fine-scale genetic mapping of a hybrid sterility factor between Drosophila simulans and D. mauritiana: the varied and elusive functions of "speciation genes". Bmc Evolutionary Biology. 10: 385. PMID 21144061 DOI: 10.1186/1471-2148-10-385 |
0.451 |
|
| 2010 |
Lemos B, Branco AT, Hartl DL. Epigenetic effects of polymorphic Y chromosomes modulate chromatin components, immune response, and sexual conflict. Proceedings of the National Academy of Sciences of the United States of America. 107: 15826-31. PMID 20798037 DOI: 10.1073/Pnas.1010383107 |
0.414 |
|
| 2010 |
Brown KM, Costanzo MS, Xu W, Roy S, Lozovsky ER, Hartl DL. Compensatory mutations restore fitness during the evolution of dihydrofolate reductase. Molecular Biology and Evolution. 27: 2682-90. PMID 20576759 DOI: 10.1093/Molbev/Msq160 |
0.572 |
|
| 2010 |
Jiang PP, Hartl DL, Lemos B. Y not a dead end: epistatic interactions between Y-linked regulatory polymorphisms and genetic background affect global gene expression in Drosophila melanogaster. Genetics. 186: 109-18. PMID 20551438 DOI: 10.1534/Genetics.110.118109 |
0.599 |
|
| 2010 |
Rogers RL, Bedford T, Lyons AM, Hartl DL. Adaptive impact of the chimeric gene Quetzalcoatl in Drosophila melanogaster. Proceedings of the National Academy of Sciences of the United States of America. 107: 10943-8. PMID 20534482 DOI: 10.1073/Pnas.1006503107 |
0.748 |
|
| 2010 |
Zilversmit MM, Volkman SK, DePristo MA, Wirth DF, Awadalla P, Hartl DL. Low-complexity regions in Plasmodium falciparum: missing links in the evolution of an extreme genome. Molecular Biology and Evolution. 27: 2198-209. PMID 20427419 DOI: 10.1093/Molbev/Msq108 |
0.412 |
|
| 2010 |
Fontanillas P, Landry CR, Wittkopp PJ, Russ C, Gruber JD, Nusbaum C, Hartl DL. Key considerations for measuring allelic expression on a genomic scale using high-throughput sequencing. Molecular Ecology. 19: 212-27. PMID 20331781 DOI: 10.1111/J.1365-294X.2010.04472.X |
0.655 |
|
| 2010 |
Gunawardena S, Karunaweera ND, Ferreira MU, Phone-Kyaw M, Pollack RJ, Alifrangis M, Rajakaruna RS, Konradsen F, Amerasinghe PH, Schousboe ML, Galappaththy GN, Abeyasinghe RR, Hartl DL, Wirth DF. Geographic structure of Plasmodium vivax: microsatellite analysis of parasite populations from Sri Lanka, Myanmar, and Ethiopia. The American Journal of Tropical Medicine and Hygiene. 82: 235-42. PMID 20133999 DOI: 10.4269/Ajtmh.2010.09-0588 |
0.311 |
|
| 2010 |
Kingan SB, Garrigan D, Hartl DL. Recurrent selection on the Winters sex-ratio genes in Drosophila simulans. Genetics. 184: 253-65. PMID 19897749 DOI: 10.1534/Genetics.109.109587 |
0.449 |
|
| 2010 |
Carneiro M, Hartl DL. Colloquium papers: Adaptive landscapes and protein evolution. Proceedings of the National Academy of Sciences of the United States of America. 107: 1747-51. PMID 19805125 DOI: 10.1073/Pnas.0906192106 |
0.772 |
|
| 2010 |
Hartl DL. Genetics and evolution: evolution of genes and proteins. Science (New York, N.Y.). 221: 847. PMID 17753475 DOI: 10.1126/Science.221.4613.847 |
0.395 |
|
| 2009 |
Sackton TB, Kulathinal RJ, Bergman CM, Quinlan AR, Dopman EB, Carneiro M, Marth GT, Hartl DL, Clark AG. Population genomic inferences from sparse high-throughput sequencing of two populations of Drosophila melanogaster. Genome Biology and Evolution. 1: 449-65. PMID 20333214 DOI: 10.1093/Gbe/Evp048 |
0.799 |
|
| 2009 |
Brown KM, Depristo MA, Weinreich DM, Hartl DL. Temporal constraints on the incorporation of regulatory mutants in evolutionary pathways. Molecular Biology and Evolution. 26: 2455-62. PMID 19602543 DOI: 10.1093/Molbev/Msp151 |
0.739 |
|
| 2009 |
Lozovsky ER, Chookajorn T, Brown KM, Imwong M, Shaw PJ, Kamchonwongpaisan S, Neafsey DE, Weinreich DM, Hartl DL. Stepwise acquisition of pyrimethamine resistance in the malaria parasite. Proceedings of the National Academy of Sciences of the United States of America. 106: 12025-30. PMID 19587242 DOI: 10.1073/Pnas.0905922106 |
0.78 |
|
| 2009 |
Bedford T, Hartl DL. Optimization of gene expression by natural selection. Proceedings of the National Academy of Sciences of the United States of America. 106: 1133-8. PMID 19139403 DOI: 10.1073/Pnas.0812009106 |
0.654 |
|
| 2009 |
Rogers RL, Bedford T, Hartl DL. Formation and longevity of chimeric and duplicate genes in Drosophila melanogaster. Genetics. 181: 313-22. PMID 19015547 DOI: 10.1534/Genetics.108.091538 |
0.753 |
|
| 2008 |
Neafsey DE, Schaffner SF, Volkman SK, Park D, Montgomery P, Milner DA, Lukens A, Rosen D, Daniels R, Houde N, Cortese JF, Tyndall E, Gates C, Stange-Thomann N, Sarr O, ... ... Hartl DL, et al. Genome-wide SNP genotyping highlights the role of natural selection in Plasmodium falciparum population divergence. Genome Biology. 9: R171. PMID 19077304 DOI: 10.1186/Gb-2008-9-12-R171 |
0.647 |
|
| 2008 |
Lemos B, Araripe LO, Fontanillas P, Hartl DL. Dominance and the evolutionary accumulation of cis- and trans-effects on gene expression. Proceedings of the National Academy of Sciences of the United States of America. 105: 14471-6. PMID 18791071 DOI: 10.1073/Pnas.0805160105 |
0.418 |
|
| 2008 |
Hegreness M, Shoresh N, Damian D, Hartl D, Kishony R. Accelerated evolution of resistance in multidrug environments. Proceedings of the National Academy of Sciences of the United States of America. 105: 13977-81. PMID 18779569 DOI: 10.1073/Pnas.0805965105 |
0.772 |
|
| 2008 |
Lynch M, Sung W, Morris K, Coffey N, Landry CR, Dopman EB, Dickinson WJ, Okamoto K, Kulkarni S, Hartl DL, Thomas WK. A genome-wide view of the spectrum of spontaneous mutations in yeast. Proceedings of the National Academy of Sciences of the United States of America. 105: 9272-7. PMID 18583475 DOI: 10.1073/Pnas.0803466105 |
0.612 |
|
| 2008 |
Bedford T, Wapinski I, Hartl DL. Overdispersion of the molecular clock varies between yeast, Drosophila and mammals. Genetics. 179: 977-84. PMID 18505862 DOI: 10.1534/Genetics.108.089185 |
0.66 |
|
| 2008 |
Bedford T, Hartl DL. Overdispersion of the molecular clock: temporal variation of gene-specific substitution rates in Drosophila. Molecular Biology and Evolution. 25: 1631-8. PMID 18480070 DOI: 10.1093/Molbev/Msn112 |
0.64 |
|
| 2008 |
Baines JF, Sawyer SA, Hartl DL, Parsch J. Effects of X-linkage and sex-biased gene expression on the rate of adaptive protein evolution in Drosophila. Molecular Biology and Evolution. 25: 1639-50. PMID 18477586 DOI: 10.1093/Molbev/Msn111 |
0.437 |
|
| 2008 |
Brown KM, Landry CR, Hartl DL, Cavalieri D. Cascading transcriptional effects of a naturally occurring frameshift mutation in Saccharomyces cerevisiae. Molecular Ecology. 17: 2985-97. PMID 18422925 DOI: 10.1111/J.1365-294X.2008.03765.X |
0.743 |
|
| 2008 |
Amodu OK, Hartl DL, Roy SW. Patterns of polymorphism in genomic regions flanking three highly polymorphic surface antigens in Plasmodium falciparum. Molecular and Biochemical Parasitology. 159: 1-6. PMID 18291540 DOI: 10.1016/J.Molbiopara.2007.12.004 |
0.396 |
|
| 2008 |
Karunaweera ND, Ferreira MU, Munasinghe A, Barnwell JW, Collins WE, King CL, Kawamoto F, Hartl DL, Wirth DF. Extensive microsatellite diversity in the human malaria parasite Plasmodium vivax. Gene. 410: 105-12. PMID 18226474 DOI: 10.1016/J.Gene.2007.11.022 |
0.321 |
|
| 2008 |
Lemos B, Araripe LO, Hartl DL. Polymorphic Y chromosomes harbor cryptic variation with manifold functional consequences. Science (New York, N.Y.). 319: 91-3. PMID 18174442 DOI: 10.1126/Science.1148861 |
0.391 |
|
| 2008 |
Roy SW, Ferreira MU, Hartl DL. Evolution of allelic dimorphism in malarial surface antigens. Heredity. 100: 103-10. PMID 17021615 DOI: 10.1038/Sj.Hdy.6800887 |
0.344 |
|
| 2008 |
Hartl D. Keeping pace with change Nature. 451: 17-17. DOI: 10.1038/451017A |
0.318 |
|
| 2007 |
Fontanillas P, Hartl DL, Reuter M. Genome organization and gene expression shape the transposable element distribution in the Drosophila melanogaster euchromatin. Plos Genetics. 3: e210. PMID 18081425 DOI: 10.1371/Journal.Pgen.0030210 |
0.438 |
|
| 2007 |
Dopman EB, Hartl DL. A portrait of copy-number polymorphism in Drosophila melanogaster. Proceedings of the National Academy of Sciences of the United States of America. 104: 19920-5. PMID 18056801 DOI: 10.1073/Pnas.0709888104 |
0.431 |
|
| 2007 |
Tao Y, Araripe L, Kingan SB, Ke Y, Xiao H, Hartl DL. A sex-ratio meiotic drive system in Drosophila simulans. II: an X-linked distorter. Plos Biology. 5: e293. PMID 17988173 DOI: 10.1371/Journal.Pbio.0050293 |
0.326 |
|
| 2007 |
Tao Y, Masly JP, Araripe L, Ke Y, Hartl DL. A sex-ratio meiotic drive system in Drosophila simulans. I: an autosomal suppressor. Plos Biology. 5: e292. PMID 17988172 DOI: 10.1371/Journal.Pbio.0050292 |
0.346 |
|
| 2007 |
Chookajorn T, Costanzo MS, Hartl DL, Deitsch KW. Malaria: a peek at the var variorum. Trends in Parasitology. 23: 563-5. PMID 17977793 DOI: 10.1016/J.Pt.2007.08.022 |
0.689 |
|
| 2007 |
Landry CR, Hartl DL, Ranz JM. Genome clashes in hybrids: insights from gene expression. Heredity. 99: 483-93. PMID 17687247 DOI: 10.1038/Sj.Hdy.6801045 |
0.771 |
|
| 2007 |
DePristo MA, Hartl DL, Weinreich DM. Mutational reversions during adaptive protein evolution. Molecular Biology and Evolution. 24: 1608-10. PMID 17556755 DOI: 10.1093/Molbev/Msm118 |
0.637 |
|
| 2007 |
Landry CR, Lemos B, Rifkin SA, Dickinson WJ, Hartl DL. Genetic properties influencing the evolvability of gene expression. Science (New York, N.Y.). 317: 118-21. PMID 17525304 DOI: 10.1126/Science.1140247 |
0.768 |
|
| 2007 |
Sawyer SA, Parsch J, Zhang Z, Hartl DL. Prevalence of positive selection among nearly neutral amino acid replacements in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 104: 6504-10. PMID 17409186 DOI: 10.1073/Pnas.0701572104 |
0.386 |
|
| 2007 |
Landry CR, Castillo-Davis CI, Ogura A, Liu JS, Hartl DL. Systems-level analysis and evolution of the phototransduction network in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 104: 3283-8. PMID 17360639 DOI: 10.1073/Pnas.0611402104 |
0.81 |
|
| 2007 |
Ferreira MU, Karunaweera ND, da Silva-Nunes M, da Silva NS, Wirth DF, Hartl DL. Population structure and transmission dynamics of Plasmodium vivax in rural Amazonia. The Journal of Infectious Diseases. 195: 1218-26. PMID 17357061 DOI: 10.1086/512685 |
0.336 |
|
| 2007 |
Gunasekera AM, Wickramarachchi T, Neafsey DE, Ganguli I, Perera L, Premaratne PH, Hartl D, Handunnetti SM, Udagama-Randeniya PV, Wirth DF. Genetic diversity and selection at the Plasmodium vivax apical membrane antigen-1 (PvAMA-1) locus in a Sri Lankan population. Molecular Biology and Evolution. 24: 939-47. PMID 17244598 DOI: 10.1093/Molbev/Msm013 |
0.618 |
|
| 2007 |
Chookajorn T, Dzikowski R, Frank M, Li F, Jiwani AZ, Hartl DL, Deitsch KW. Epigenetic memory at malaria virulence genes. Proceedings of the National Academy of Sciences of the United States of America. 104: 899-902. PMID 17209011 DOI: 10.1073/Pnas.0609084103 |
0.722 |
|
| 2007 |
Volkman SK, Sabeti PC, DeCaprio D, Neafsey DE, Schaffner SF, Milner DA, Daily JP, Sarr O, Ndiaye D, Ndir O, Mboup S, Duraisingh MT, Lukens A, Derr A, Stange-Thomann N, ... ... Hartl DL, et al. A genome-wide map of diversity in Plasmodium falciparum. Nature Genetics. 39: 113-9. PMID 17159979 DOI: 10.1038/Ng1930 |
0.651 |
|
| 2007 |
Volkman SK, Lozovsky E, Barry AE, Bedford T, Bethke L, Myrick A, Day KP, Hartl DL, Wirth DF, Sawyer SA. Genomic heterogeneity in the density of noncoding single-nucleotide and microsatellite polymorphisms in Plasmodium falciparum. Gene. 387: 1-6. PMID 17005334 DOI: 10.1016/J.Gene.2006.07.026 |
0.611 |
|
| 2007 |
Ferreira MU, Hartl DL. Plasmodium falciparum: worldwide sequence diversity and evolution of the malaria vaccine candidate merozoite surface protein-2 (MSP-2). Experimental Parasitology. 115: 32-40. PMID 16797008 DOI: 10.1016/J.Exppara.2006.05.003 |
0.358 |
|
| 2007 |
Hartl D. The spandrels of the genome Nature Genetics. 39: 811-811. DOI: 10.1038/Ng0707-811 |
0.303 |
|
| 2006 |
Bethke LL, Zilversmit M, Nielsen K, Daily J, Volkman SK, Ndiaye D, Lozovsky ER, Hartl DL, Wirth DF. Duplication, gene conversion, and genetic diversity in the species-specific acyl-CoA synthetase gene family of Plasmodium falciparum. Molecular and Biochemical Parasitology. 150: 10-24. PMID 16860410 DOI: 10.1016/J.Molbiopara.2006.06.004 |
0.417 |
|
| 2006 |
DePristo MA, Zilversmit MM, Hartl DL. On the abundance, amino acid composition, and evolutionary dynamics of low-complexity regions in proteins. Gene. 378: 19-30. PMID 16806741 DOI: 10.1016/J.Gene.2006.03.023 |
0.385 |
|
| 2006 |
Barry AE, Leliwa-Sytek A, Man K, Kasper JM, Hartl DL, Day KP. Variable SNP density in aspartyl-protease genes of the malaria parasite Plasmodium falciparum. Gene. 376: 163-73. PMID 16784823 DOI: 10.1016/J.Gene.2006.02.029 |
0.396 |
|
| 2006 |
Ponce R, Hartl DL. The evolution of the novel Sdic gene cluster in Drosophila melanogaster. Gene. 376: 174-83. PMID 16765537 DOI: 10.1016/J.Gene.2006.02.011 |
0.403 |
|
| 2006 |
Roy SW, Hartl DL. Very little intron loss/gain in Plasmodium: intron loss/gain mutation rates and intron number. Genome Research. 16: 750-6. PMID 16702411 DOI: 10.1101/Gr.4845406 |
0.369 |
|
| 2006 |
Chookajorn T, Hartl DL. Position-specific polymorphism of Plasmodium falciparum Stuttering motif in a PHISTc PFI1780w. Experimental Parasitology. 114: 126-8. PMID 16674945 DOI: 10.1016/J.Exppara.2006.02.019 |
0.747 |
|
| 2006 |
Weinreich DM, Delaney NF, Depristo MA, Hartl DL. Darwinian evolution can follow only very few mutational paths to fitter proteins. Science (New York, N.Y.). 312: 111-4. PMID 16601193 DOI: 10.1126/Science.1123539 |
0.617 |
|
| 2006 |
Hegreness M, Shoresh N, Hartl D, Kishony R. An equivalence principle for the incorporation of favorable mutations in asexual populations. Science (New York, N.Y.). 311: 1615-7. PMID 16543462 DOI: 10.1126/Science.1122469 |
0.79 |
|
| 2006 |
Landry CR, Townsend JP, Hartl DL, Cavalieri D. Ecological and evolutionary genomics of Saccharomyces cerevisiae. Molecular Ecology. 15: 575-91. PMID 16499686 DOI: 10.1111/J.1365-294X.2006.02778.X |
0.714 |
|
| 2006 |
Landry CR, Oh J, Hartl DL, Cavalieri D. Genome-wide scan reveals that genetic variation for transcriptional plasticity in yeast is biased towards multi-copy and dispensable genes. Gene. 366: 343-51. PMID 16427747 DOI: 10.1016/J.Gene.2005.10.042 |
0.648 |
|
| 2006 |
Neafsey DE, Hartl DL. Erratum to “Convergent loss of an anciently duplicated, functionally divergent RH2 opsin gene in the fugu and Tetraodon pufferfish lineages” [Gene 350 (2005) 161–171] Gene. 370: 125. DOI: 10.1016/J.Gene.2006.01.002 |
0.634 |
|
| 2005 |
Blumenstiel JP, Hartl DL. Evidence for maternally transmitted small interfering RNA in the repression of transposition in Drosophila virilis. Proceedings of the National Academy of Sciences of the United States of America. 102: 15965-70. PMID 16247000 DOI: 10.1073/Pnas.0508192102 |
0.706 |
|
| 2005 |
Landry CR, Wittkopp PJ, Taubes CH, Ranz JM, Clark AG, Hartl DL. Compensatory cis-trans evolution and the dysregulation of gene expression in interspecific hybrids of Drosophila. Genetics. 171: 1813-22. PMID 16143608 DOI: 10.1534/Genetics.105.047449 |
0.783 |
|
| 2005 |
DePristo MA, Weinreich DM, Hartl DL. Missense meanderings in sequence space: a biophysical view of protein evolution. Nature Reviews. Genetics. 6: 678-87. PMID 16074985 DOI: 10.1038/Nrg1672 |
0.616 |
|
| 2005 |
Neafsey DE, Hartl DL, Berriman M. Evolution of noncoding and silent coding sites in the Plasmodium falciparum and Plasmodium reichenowi genomes. Molecular Biology and Evolution. 22: 1621-6. PMID 15858207 DOI: 10.1093/Molbev/Msi154 |
0.633 |
|
| 2005 |
Neafsey DE, Hartl DL. Convergent loss of an anciently duplicated, functionally divergent RH2 opsin gene in the fugu and Tetraodon pufferfish lineages. Gene. 350: 161-71. PMID 15820147 DOI: 10.1016/J.Gene.2005.02.011 |
0.682 |
|
| 2005 |
Lemos B, Meiklejohn CD, Cáceres M, Hartl DL. Rates of divergence in gene expression profiles of primates, mice, and flies: stabilizing selection and variability among functional categories. Evolution; International Journal of Organic Evolution. 59: 126-37. PMID 15792233 DOI: 10.1111/J.0014-3820.2005.Tb00900.X |
0.761 |
|
| 2005 |
Lemos B, Bettencourt BR, Meiklejohn CD, Hartl DL. Evolution of proteins and gene expression levels are coupled in Drosophila and are independently associated with mRNA abundance, protein length, and number of protein-protein interactions. Molecular Biology and Evolution. 22: 1345-54. PMID 15746013 DOI: 10.1093/Molbev/Msi122 |
0.761 |
|
| 2005 |
Kulathinal RJ, Hartl DL. The latest buzz in comparative genomics. Genome Biology. 6: 201. PMID 15642105 DOI: 10.1186/Gb-2005-6-1-201 |
0.683 |
|
| 2004 |
Kulathinal RJ, Bettencourt BR, Hartl DL. Compensated deleterious mutations in insect genomes. Science (New York, N.Y.). 306: 1553-4. PMID 15498973 DOI: 10.1126/Science.1100522 |
0.691 |
|
| 2004 |
Meiklejohn CD, Kim Y, Hartl DL, Parsch J. Identification of a locus under complex positive selection in Drosophila simulans by haplotype mapping and composite-likelihood estimation. Genetics. 168: 265-79. PMID 15454542 DOI: 10.1534/Genetics.103.025494 |
0.751 |
|
| 2004 |
Lemos B, Meiklejohn CD, Hartl DL. Regulatory evolution across the protein interaction network. Nature Genetics. 36: 1059-60. PMID 15378060 DOI: 10.1038/Ng1427 |
0.719 |
|
| 2004 |
Neafsey DE, Blumenstiel JP, Hartl DL. Different regulatory mechanisms underlie similar transposable element profiles in pufferfish and fruitflies. Molecular Biology and Evolution. 21: 2310-8. PMID 15342795 DOI: 10.1093/Molbev/Msh243 |
0.813 |
|
| 2004 |
Castillo-Davis CI, Hartl DL, Achaz G. cis-Regulatory and protein evolution in orthologous and duplicate genes. Genome Research. 14: 1530-6. PMID 15256508 DOI: 10.1101/Gr.2662504 |
0.825 |
|
| 2004 |
Castillo-Davis CI, Kondrashov FA, Hartl DL, Kulathinal RJ. The functional genomic distribution of protein divergence in two animal phyla: coevolution, genomic conflict, and constraint. Genome Research. 14: 802-11. PMID 15123580 DOI: 10.1101/Gr.2195604 |
0.822 |
|
| 2004 |
Castillo-Davis CI, Bedford TB, Hartl DL. Accelerated rates of intron gain/loss and protein evolution in duplicate genes in human and mouse malaria parasites. Molecular Biology and Evolution. 21: 1422-7. PMID 15084679 DOI: 10.1093/Molbev/Msh143 |
0.82 |
|
| 2004 |
Hartl DL. The origin of malaria: mixed messages from genetic diversity. Nature Reviews. Microbiology. 2: 15-22. PMID 15035005 DOI: 10.1038/Nrmicro795 |
0.324 |
|
| 2004 |
Ranz JM, Namgyal K, Gibson G, Hartl DL. Anomalies in the expression profile of interspecific hybrids of Drosophila melanogaster and Drosophila simulans. Genome Research. 14: 373-9. PMID 14962989 DOI: 10.1101/Gr.2019804 |
0.681 |
|
| 2003 |
Sawyer SA, Kulathinal RJ, Bustamante CD, Hartl DL. Bayesian analysis suggests that most amino acid replacements in Drosophila are driven by positive selection. Journal of Molecular Evolution. 57: S154-64. PMID 15008412 DOI: 10.1007/S00239-003-0022-3 |
0.754 |
|
| 2003 |
Tao Y, Hartl DL. Genetic dissection of hybrid incompatibilities between Drosophila simulans and D. mauritiana. III. Heterogeneous accumulation of hybrid incompatibilities, degree of dominance, and implications for Haldane's rule. Evolution; International Journal of Organic Evolution. 57: 2580-98. PMID 14686533 DOI: 10.1111/J.0014-3820.2003.Tb01501.X |
0.306 |
|
| 2003 |
Castillo-Davis CI, Hartl DL. Conservation, relocation and duplication in genome evolution. Trends in Genetics : Tig. 19: 593-7. PMID 14585607 DOI: 10.1016/J.Tig.2003.09.009 |
0.82 |
|
| 2003 |
Tao Y, Zeng ZB, Li J, Hartl DL, Laurie CC. Genetic dissection of hybrid incompatibilities between Drosophila simulans and D. mauritiana. II. Mapping hybrid male sterility loci on the third chromosome. Genetics. 164: 1399-418. PMID 12930748 |
0.533 |
|
| 2003 |
Tao Y, Chen S, Hartl DL, Laurie CC. Genetic dissection of hybrid incompatibilities between Drosophila simulans and D. mauritiana. I. Differential accumulation of hybrid male sterility effects on the X and autosomes. Genetics. 164: 1383-97. PMID 12930747 |
0.539 |
|
| 2003 |
Meiklejohn CD, Parsch J, Ranz JM, Hartl DL. Rapid evolution of male-biased gene expression in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 100: 9894-9. PMID 12907700 DOI: 10.1073/Pnas.1630690100 |
0.818 |
|
| 2003 |
Ranz JM, Ponce AR, Hartl DL, Nurminsky D. Origin and evolution of a new gene expressed in the Drosophila sperm axoneme. Genetica. 118: 233-44. PMID 12868612 DOI: 10.1023/A:1024186516554 |
0.813 |
|
| 2003 |
Ranz JM, Castillo-Davis CI, Meiklejohn CD, Hartl DL. Sex-dependent gene expression and evolution of the Drosophila transcriptome. Science (New York, N.Y.). 300: 1742-5. PMID 12805547 DOI: 10.1126/Science.1085881 |
0.804 |
|
| 2003 |
Townsend JP, Nielsen KM, Fisher DS, Hartl DL. Horizontal acquisition of divergent chromosomal DNA in bacteria: effects of mutator phenotypes. Genetics. 164: 13-21. PMID 12750317 DOI: 10.7490/F1000Research.1096391.1 |
0.588 |
|
| 2003 |
Castillo-Davis CI, Hartl DL. GeneMerge--post-genomic analysis, data mining, and hypothesis testing. Bioinformatics (Oxford, England). 19: 891-2. PMID 12724301 DOI: 10.1093/Bioinformatics/Btg114 |
0.79 |
|
| 2003 |
Townsend JP, Cavalieri D, Hartl DL. Population genetic variation in genome-wide gene expression. Molecular Biology and Evolution. 20: 955-63. PMID 12716989 DOI: 10.1093/Molbev/Msg106 |
0.639 |
|
| 2003 |
Nielsen KM, Kasper J, Choi M, Bedford T, Kristiansen K, Wirth DF, Volkman SK, Lozovsky ER, Hartl DL. Gene conversion as a source of nucleotide diversity in Plasmodium falciparum. Molecular Biology and Evolution. 20: 726-34. PMID 12679555 DOI: 10.1093/Molbev/Msg076 |
0.637 |
|
| 2003 |
Bustamante CD, Nielsen R, Hartl DL. Maximum likelihood and Bayesian methods for estimating the distribution of selective effects among classes of mutations using DNA polymorphism data. Theoretical Population Biology. 63: 91-103. PMID 12615493 DOI: 10.1016/S0040-5809(02)00050-3 |
0.508 |
|
| 2003 |
Winzeler EA, Castillo-Davis CI, Oshiro G, Liang D, Richards DR, Zhou Y, Hartl DL. Genetic diversity in yeast assessed with whole-genome oligonucleotide arrays. Genetics. 163: 79-89. PMID 12586698 |
0.816 |
|
| 2002 |
Townsend JP, Hartl DL. Bayesian analysis of gene expression levels: statistical quantification of relative mRNA level across multiple strains or treatments. Genome Biology. 3: RESEARCH0071. PMID 12537560 DOI: 10.1186/Gb-2002-3-12-Research0071 |
0.582 |
|
| 2002 |
Blumenstiel JP, Hartl DL, Lozovsky ER. Patterns of insertion and deletion in contrasting chromatin domains. Molecular Biology and Evolution. 19: 2211-25. PMID 12446812 DOI: 10.1093/Oxfordjournals.Molbev.A004045 |
0.752 |
|
| 2002 |
Volkman SK, Hartl DL, Wirth DF, Nielsen KM, Choi M, Batalov S, Zhou Y, Plouffe D, Le Roch KG, Abagyan R, Winzeler EA. Excess polymorphisms in genes for membrane proteins in Plasmodium falciparum. Science (New York, N.Y.). 298: 216-8. PMID 12364807 DOI: 10.1126/Science.1075642 |
0.355 |
|
| 2002 |
Castillo-Davis CI, Mekhedov SL, Hartl DL, Koonin EV, Kondrashov FA. Selection for short introns in highly expressed genes. Nature Genetics. 31: 415-8. PMID 12134150 DOI: 10.1038/Ng940 |
0.808 |
|
| 2002 |
Grosu P, Townsend JP, Hartl DL, Cavalieri D. Pathway Processor: a tool for integrating whole-genome expression results into metabolic networks. Genome Research. 12: 1121-6. PMID 12097350 DOI: 10.1101/Gr.226602 |
0.547 |
|
| 2002 |
Hartl DL, Volkman SK, Nielsen KM, Barry AE, Day KP, Wirth DF, Winzeler EA. The paradoxical population genetics of Plasmodium falciparum. Trends in Parasitology. 18: 266-72. PMID 12036741 DOI: 10.1016/S1471-4922(02)02268-7 |
0.304 |
|
| 2002 |
Castillo-Davis CI, Hartl DL. Genome evolution and developmental constraint in Caenorhabditis elegans. Molecular Biology and Evolution. 19: 728-35. PMID 11961106 DOI: 10.1093/Oxfordjournals.Molbev.A004131 |
0.818 |
|
| 2002 |
Bustamante CD, Nielsen R, Sawyer SA, Olsen KM, Purugganan MD, Hartl DL. The cost of inbreeding in Arabidopsis. Nature. 416: 531-4. PMID 11932744 DOI: 10.1038/416531A |
0.576 |
|
| 2002 |
Lozovsky ER, Nurminsky D, Wimmer EA, Hartl DL. Unexpected stability of mariner transgenes in Drosophila. Genetics. 160: 527-35. PMID 11861559 |
0.669 |
|
| 2002 |
Bustamante CD, Nielsen R, Hartl DL. A maximum likelihood method for analyzing pseudogene evolution: implications for silent site evolution in humans and rodents. Molecular Biology and Evolution. 19: 110-7. PMID 11752196 DOI: 10.1093/Oxfordjournals.Molbev.A003975 |
0.564 |
|
| 2002 |
Meiklejohn CD, Hartl DL. A single mode of canalization Trends in Ecology and Evolution. 17: 468-473. DOI: 10.1016/S0169-5347(02)02596-X |
0.727 |
|
| 2001 |
Bustamante CD, Wakeley J, Sawyer S, Hartl DL. Directional selection and the site-frequency spectrum. Genetics. 159: 1779-88. PMID 11779814 |
0.417 |
|
| 2001 |
Tao Y, Hartl DL, Laurie CC. Sex-ratio segregation distortion associated with reproductive isolation in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 98: 13183-8. PMID 11687638 DOI: 10.1073/Pnas.231478798 |
0.597 |
|
| 2001 |
Parsch J, Meiklejohn CD, Hartl DL. Patterns of DNA sequence variation suggest the recent action of positive selection in the janus-ocnus region of Drosophila simulans. Genetics. 159: 647-57. PMID 11606541 |
0.75 |
|
| 2001 |
Volkman SK, Barry AE, Lyons EJ, Nielsen KM, Thomas SM, Choi M, Thakore SS, Day KP, Wirth DF, Hartl DL. Recent origin of Plasmodium falciparum from a single progenitor. Science (New York, N.Y.). 293: 482-4. PMID 11463913 DOI: 10.1126/Science.1059878 |
0.382 |
|
| 2001 |
Bensasson D, Zhang D, Hartl DL, Hewitt GM. Mitochondrial pseudogenes: evolution's misplaced witnesses. Trends in Ecology & Evolution. 16: 314-321. PMID 11369110 DOI: 10.1016/S0169-5347(01)02151-6 |
0.737 |
|
| 2001 |
Parsch J, Meiklejohn CD, Hauschteck-Jungen E, Hunziker P, Hartl DL. Molecular evolution of the ocnus and janus genes in the Drosophila melanogaster species subgroup. Molecular Biology and Evolution. 18: 801-11. PMID 11319264 DOI: 10.1093/Oxfordjournals.Molbev.A003862 |
0.774 |
|
| 2001 |
Bensasson D, Petrov DA, Zhang DX, Hartl DL, Hewitt GM. Genomic gigantism: DNA loss is slow in mountain grasshoppers. Molecular Biology and Evolution. 18: 246-53. PMID 11158383 DOI: 10.1093/Oxfordjournals.Molbev.A003798 |
0.806 |
|
| 2001 |
Nurminsky D, Aguiar DD, Bustamante CD, Hartl DL. Chromosomal effects of rapid gene evolution in Drosophila melanogaster. Science (New York, N.Y.). 291: 128-30. PMID 11141564 DOI: 10.1126/Science.291.5501.128 |
0.766 |
|
| 2000 |
Townsend JP, Hartl DL. The kinetics of transposable element autoregulation. Genetica. 108: 229-37. PMID 11294609 DOI: 10.1023/A:1004172703790 |
0.537 |
|
| 2000 |
Hartl DL. Molecular melodies in high and low C. Nature Reviews. Genetics. 1: 145-9. PMID 11253654 DOI: 10.1038/35038580 |
0.345 |
|
| 2000 |
Goldfeld AE, Leung JY, Sawyer SA, Hartl DL. Post-genomics and the neutral theory: variation and conservation in the tumor necrosis factor-alpha promoter. Gene. 261: 19-25. PMID 11164033 DOI: 10.1016/S0378-1119(00)00477-7 |
0.384 |
|
| 2000 |
Cavalieri D, Townsend JP, Hartl DL. Manifold anomalies in gene expression in a vineyard isolate of Saccharomyces cerevisiae revealed by DNA microarray analysis. Proceedings of the National Academy of Sciences of the United States of America. 97: 12369-74. PMID 11035792 DOI: 10.1073/Pnas.210395297 |
0.642 |
|
| 2000 |
Siegal ML, Hartl DL. Application of Cre/loxP in Drosophila. Site-specific recombination and transgene coplacement. Methods in Molecular Biology (Clifton, N.J.). 136: 487-95. PMID 10840736 DOI: 10.1385/1-59259-065-9:487 |
0.755 |
|
| 2000 |
Petrov DA, Hartl DL. Pseudogene evolution and natural selection for a compact genome. The Journal of Heredity. 91: 221-7. PMID 10833048 DOI: 10.1093/Jhered/91.3.221 |
0.689 |
|
| 2000 |
Hartl DL. Fly meets shotgun: shotgun wins. Nature Genetics. 24: 327-8. PMID 10742085 DOI: 10.1038/74125 |
0.339 |
|
| 2000 |
Bustamante CD, Townsend JP, Hartl DL. Solvent accessibility and purifying selection within proteins of Escherichia coli and Salmonella enterica. Molecular Biology and Evolution. 17: 301-8. PMID 10677853 DOI: 10.1093/Oxfordjournals.Molbev.A026310 |
0.642 |
|
| 2000 |
Petrov DA, Sangster TA, Johnston JS, Hartl DL, Shaw KL. Evidence for DNA loss as a determinant of genome size. Science (New York, N.Y.). 287: 1060-2. PMID 10669421 DOI: 10.1126/Science.287.5455.1060 |
0.652 |
|
| 1999 |
Lozovskaya ER, Nurminsky DI, Petrov DA, Hartl DL. Genome size as a mutation-selection-drift process. Genes & Genetic Systems. 74: 201-7. PMID 10734601 DOI: 10.1266/Ggs.74.201 |
0.805 |
|
| 1999 |
Siegal ML, Hartl DL. Oviposition-site preference in Drosophila following interspecific gene transfer of the Alcohol dehydrogenase locus. Behavior Genetics. 29: 199-204. PMID 10547927 DOI: 10.1023/A:1021648103496 |
0.781 |
|
| 1999 |
Charlesworth B, Charlesworth D, Nurminsky DI, Hartl DL. How was the Sdic gene fixed? [6] (multiple letters) Nature. 400: 519-520. PMID 10448854 DOI: 10.1038/22922 |
0.755 |
|
| 1999 |
Petrov DA, Hartl DL. Patterns of nucleotide substitution in Drosophila and mammalian genomes. Proceedings of the National Academy of Sciences of the United States of America. 96: 1475-9. PMID 9990048 DOI: 10.1073/Pnas.96.4.1475 |
0.642 |
|
| 1999 |
Boyd EF, Hartl DL. Analysis of the type 1 pilin gene cluster fim in Salmonella: its distinct evolutionary histories in the 5' and 3' regions. Journal of Bacteriology. 181: 1301-8. PMID 9973358 DOI: 10.1128/Jb.181.4.1301-1308.1999 |
0.386 |
|
| 1999 |
Nurminsky DI, Hartl DL. reply: How was the Sdic gene fixed? Nature. 400: 520-520. DOI: 10.1038/22924 |
0.728 |
|
| 1998 |
Petrov DA, Chao YC, Stephenson EC, Hartl DL. Pseudogene evolution in Drosophila suggests a high rate of DNA loss. Molecular Biology and Evolution. 15: 1562-7. PMID 12572619 DOI: 10.1093/Oxfordjournals.Molbev.A025883 |
0.612 |
|
| 1998 |
Coelho PA, Queiroz-Machado J, Hartl D, Sunkel CE. Pattern of chromosomal localization of the Hoppel transposable element family in the Drosophila melanogaster subgroup. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 6: 385-95. PMID 9872668 DOI: 10.1023/A:1009277322626 |
0.336 |
|
| 1998 |
Siegal ML, Hartl DL. An experimental test for lineage-specific position effects on alcohol dehydrogenase (Adh) genes in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 95: 15513-8. PMID 9861000 DOI: 10.1073/Pnas.95.26.15513 |
0.811 |
|
| 1998 |
Nurminsky DI, Nurminskaya MV, De Aguiar D, Hartl DL. Selective sweep of a newly evolved sperm-specific gene in Drosophila. Nature. 396: 572-5. PMID 9859991 DOI: 10.1038/25126 |
0.749 |
|
| 1998 |
Nurminsky DI, Nurminskaya MV, Benevolenskaya EV, Shevelyov YY, Hartl DL, Gvozdev VA. Cytoplasmic dynein intermediate-chain isoforms with different targeting properties created by tissue-specific alternative splicing. Molecular and Cellular Biology. 18: 6816-25. PMID 9774695 DOI: 10.1128/Mcb.18.11.6816 |
0.727 |
|
| 1998 |
Boyd EF, Hartl DL. Diversifying selection governs sequence polymorphism in the major adhesin proteins fimA, papA, and sfaA of Escherichia coli. Journal of Molecular Evolution. 47: 258-67. PMID 9732452 DOI: 10.1007/Pl00006383 |
0.43 |
|
| 1998 |
Hartl DL, Taubes CH. Towards a theory of evolutionary adaptation. Genetica. 102: 525-33. PMID 9720296 DOI: 10.1007/978-94-011-5210-5_39 |
0.323 |
|
| 1998 |
Vieira J, Vieira CP, Hartl DL, Lozovskaya ER. Factors contributing to the hybrid dysgenesis syndrome in Drosophila virilis. Genetical Research. 71: 109-17. PMID 9717433 DOI: 10.1017/S001667239800322X |
0.518 |
|
| 1998 |
Moriyama EN, Petrov DA, Hartl DL. Genome size and intron size in Drosophila. Molecular Biology and Evolution. 15: 770-3. PMID 9615458 DOI: 10.1093/Oxfordjournals.Molbev.A025980 |
0.614 |
|
| 1998 |
Fadool JM, Hartl DL, Dowling JE. Transposition of the mariner element from Drosophila mauritiana in zebrafish. Proceedings of the National Academy of Sciences of the United States of America. 95: 5182-6. PMID 9560250 DOI: 10.1073/Pnas.95.9.5182 |
0.358 |
|
| 1998 |
Petrov DA, Hartl DL. High rate of DNA loss in the Drosophila melanogaster and Drosophila virilis species groups. Molecular Biology and Evolution. 15: 293-302. PMID 9501496 DOI: 10.1093/Oxfordjournals.Molbev.A025926 |
0.657 |
|
| 1998 |
Boyd EF, Hartl DL. Chromosomal regions specific to pathogenic isolates of Escherichia coli have a phylogenetically clustered distribution. Journal of Bacteriology. 180: 1159-65. PMID 9495754 DOI: 10.1128/Jb.180.5.1159-1165.1998 |
0.322 |
|
| 1998 |
Hartl DL, Powell JR. Evolutionary Genetics on the Fly Evolution. 52: 631. DOI: 10.2307/2411099 |
0.31 |
|
| 1998 |
Hartl DL. Evolutionary Genetics On The Fly Evolution. 52: 631-635. DOI: 10.1111/J.1558-5646.1998.Tb01663.X |
0.335 |
|
| 1998 |
Petrov DA, Chao YC, Stephenson EC, Hartl DL. Pseudogene evolution in Drosophila suggests a high rate of DNA loss [1] Molecular Biology and Evolution. 15: 1562-1567. |
0.574 |
|
| 1997 |
Petrov DA, Hartl DL. Trash DNA is what gets thrown away: high rate of DNA loss in Drosophila. Gene. 205: 279-89. PMID 9461402 DOI: 10.1016/S0378-1119(97)00516-7 |
0.627 |
|
| 1997 |
Hartl DL, Lohe AR, Lozovskaya ER. Modern thoughts on an ancyent marinere: function, evolution, regulation. Annual Review of Genetics. 31: 337-58. PMID 9442899 DOI: 10.1146/Annurev.Genet.31.1.337 |
0.363 |
|
| 1997 |
Hartl DL, Lohe AR, Lozovskaya ER. Regulation of the transposable element mariner. Genetica. 100: 177-84. PMID 9440271 DOI: 10.1023/A:1018333629222 |
0.358 |
|
| 1997 |
Vieira CP, Vieira J, Hartl DL. The evolution of small gene clusters: evidence for an independent origin of the maltase gene cluster in Drosophila virilis and Drosophila melanogaster. Molecular Biology and Evolution. 14: 985-93. PMID 9335139 DOI: 10.1093/Oxfordjournals.Molbev.A025715 |
0.556 |
|
| 1997 |
Vieira J, Vieira CP, Hartl DL, Lozovskaya ER. Discordant rates of chromosome evolution in the Drosophila virilis species group. Genetics. 147: 223-30. PMID 9286682 |
0.472 |
|
| 1997 |
Vieira J, Vieira CP, Hartl DL, Lozovskaya ER. A framework physical map of Drosophila virilis based on P1 clones: applications in genome evolution. Chromosoma. 106: 99-107. PMID 9215559 DOI: 10.1007/S004120050229 |
0.593 |
|
| 1997 |
Boyd EF, Hartl DL. Nonrandom location of IS1 elements in the genomes of natural isolates of Escherichia coli. Molecular Biology and Evolution. 14: 725-32. PMID 9214745 DOI: 10.1093/Oxfordjournals.Molbev.A025812 |
0.35 |
|
| 1997 |
Hartl DL. Mariner sails into Leishmania. Science (New York, N.Y.). 276: 1659-60. PMID 9206830 DOI: 10.1126/Science.276.5319.1659 |
0.327 |
|
| 1997 |
Hartl DL, Lozovskaya ER, Nurminsky DI, Lohe AR. What restricts the activity of mariner-like transposable elements. Trends in Genetics : Tig. 13: 197-201. PMID 9154003 DOI: 10.1016/S0168-9525(97)01087-1 |
0.69 |
|
| 1997 |
Boyd EF, Hartl DL. Recent horizontal transmission of plasmids between natural populations of Escherichia coli and Salmonella enterica. Journal of Bacteriology. 179: 1622-7. PMID 9045822 DOI: 10.1128/Jb.179.5.1622-1627.1997 |
0.323 |
|
| 1997 |
Lohe AR, De Aguiar D, Hartl DL. Mutations in the mariner transposase: the D,D(35)E consensus sequence is nonfunctional. Proceedings of the National Academy of Sciences of the United States of America. 94: 1293-7. PMID 9037046 DOI: 10.1073/Pnas.94.4.1293 |
0.304 |
|
| 1996 |
Hartl DL. EST! EST!! EST!!! Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 18: 1021-3. PMID 8976160 DOI: 10.1002/Bies.950181213 |
0.399 |
|
| 1996 |
Hartl DL, Taubes CH. Compensatory nearly neutral mutations: selection without adaptation. Journal of Theoretical Biology. 182: 303-9. PMID 8944162 DOI: 10.1006/Jtbi.1996.0168 |
0.322 |
|
| 1996 |
Petrov DA, Lozovskaya ER, Hartl DL. High intrinsic rate of DNA loss in Drosophila. Nature. 384: 346-9. PMID 8934517 DOI: 10.1038/384346A0 |
0.662 |
|
| 1996 |
Siegal ML, Hartl DL. Transgene Coplacement and high efficiency site-specific recombination with the Cre/loxP system in Drosophila. Genetics. 144: 715-26. PMID 8889532 |
0.78 |
|
| 1996 |
Lohe AR, Hartl DL. Autoregulation of mariner transposase activity by overproduction and dominant-negative complementation. Molecular Biology and Evolution. 13: 549-55. PMID 8882498 DOI: 10.1093/Oxfordjournals.Molbev.A025615 |
0.329 |
|
| 1996 |
Coelho PA, Nurminsky D, Hartl D, Sunkel CE. Identification of Porto-1, a new repeated sequence that localises close to the centromere of chromosome 2 of Drosophila melanogaster. Chromosoma. 105: 211-22. PMID 8854880 DOI: 10.1007/Bf02528769 |
0.369 |
|
| 1996 |
Lozovskaya ER, Nurminsky DI, Hartl DL, Sullivan DT. Germline transformation of Drosophila virilis mediated by the transposable element hobo. Genetics. 142: 173-7. PMID 8770594 |
0.669 |
|
| 1996 |
Ayala FJ, Wetterer JK, Longino JT, Hartl DL. Molecular phylogeny of Azteca ants (Hymenoptera:Formicidae) and the colonization of Cecropia trees. Molecular Phylogenetics and Evolution. 5: 423-8. PMID 8728400 DOI: 10.1006/Mpev.1996.0037 |
0.311 |
|
| 1996 |
Nurminsky DI, Hartl DL. Sequence scanning: A method for rapid sequence acquisition from large-fragment DNA clones. Proceedings of the National Academy of Sciences of the United States of America. 93: 1694-8. PMID 8643692 DOI: 10.1073/Pnas.93.4.1694 |
0.698 |
|
| 1996 |
Nurminsky DI, Moriyama EN, Lozovskaya ER, Hartl DL. Molecular phylogeny and genome evolution in the Drosophila virilis species group: duplications of the alcohol dehydrogenase gene. Molecular Biology and Evolution. 13: 132-49. PMID 8583887 DOI: 10.1093/Oxfordjournals.Molbev.A025551 |
0.729 |
|
| 1995 |
Lozovskaya ER, Hartl DL, Petrov DA. Genomic regulation of transposable elements in Drosophila. Current Opinion in Genetics & Development. 5: 768-73. PMID 8745075 DOI: 10.1016/0959-437X(95)80009-T |
0.659 |
|
| 1995 |
Segarra C, Lozovskaya ER, Ribó G, Aguadé M, Hartl DL. P1 clones from Drosophila melanogaster as markers to study the chromosomal evolution of Muller's A element in two species of the obscura group of Drosophila. Chromosoma. 104: 129-36. PMID 8585990 DOI: 10.1007/Bf00347695 |
0.308 |
|
| 1995 |
Lohe AR, Moriyama EN, Lidholm DA, Hartl DL. Horizontal transmission, vertical inactivation, and stochastic loss of mariner-like transposable elements. Molecular Biology and Evolution. 12: 62-72. PMID 7877497 DOI: 10.1093/Oxfordjournals.Molbev.A040191 |
0.31 |
|
| 1995 |
Petrov DA, Schutzman JL, Hartl DL, Lozovskaya ER. Diverse transposable elements are mobilized in hybrid dysgenesis in Drosophila virilis. Proceedings of the National Academy of Sciences of the United States of America. 92: 8050-4. PMID 7644536 DOI: 10.1073/Pnas.92.17.8050 |
0.61 |
|
| 1994 |
Hartl DL, Nurminsky DI, Jones RW, Lozovskaya ER. Genome structure and evolution in Drosophila: applications of the framework P1 map. Proceedings of the National Academy of Sciences of the United States of America. 91: 6824-9. PMID 8041703 DOI: 10.1073/Pnas.91.15.6824 |
0.703 |
|
| 1994 |
Carulli JP, Chen DM, Stark WS, Hartl DL. Phylogeny and physiology of Drosophila opsins. Journal of Molecular Evolution. 38: 250-62. PMID 8006992 DOI: 10.1007/Bf00176087 |
0.402 |
|
| 1994 |
Lewontin RC, Hartl DL. Forensic DNA typing dispute [1] Nature. 372: 398-399. PMID 7984229 DOI: 10.1038/372398B0 |
0.524 |
|
| 1994 |
Ayala FJ, Krane DE, Hartl DL. Genetic variation in IncI1-ColIb plasmids. Journal of Molecular Evolution. 39: 129-33. PMID 7932776 DOI: 10.1007/Bf00163801 |
0.418 |
|
| 1994 |
Capy P, Langin T, Bigot Y, Brunet F, Daboussi MJ, Periquet G, David JR, Hartl DL. Horizontal transmission versus ancient origin: mariner in the witness box. Genetica. 93: 161-70. PMID 7813913 DOI: 10.1007/Bf01435248 |
0.308 |
|
| 1994 |
Hartl DL, Lewontin RC. DNA fingerprinting. Science (New York, N.Y.). 266: 201; author reply 20. PMID 7802835 DOI: 10.1126/science.7802835 |
0.472 |
|
| 1993 |
Neyfakh AA, Hartl DL. GENETIC CONTROL OF THE RATE OF EMBRYONIC DEVELOPMENT: SELECTION FOR FASTER DEVELOPMENT AT ELEVATED TEMPERATURES. Evolution; International Journal of Organic Evolution. 47: 1625-1631. PMID 28564900 DOI: 10.1111/J.1558-5646.1993.Tb02182.X |
0.317 |
|
| 1993 |
Lawrence JG, Hartl DL, Ochman H. Sequencing products of polymerase chain reaction. Methods in Enzymology. 218: 26-35. PMID 8510537 DOI: 10.1016/0076-6879(93)18005-W |
0.519 |
|
| 1993 |
Lozovskaya ER, Petrov DA, Hartl DL. A combined molecular and cytogenetic approach to genome evolution in Drosophila using large-fragment DNA cloning. Chromosoma. 102: 253-66. PMID 8486077 DOI: 10.1007/Bf00352399 |
0.678 |
|
| 1993 |
Hartl DL, Lewontin RC. DNA fingerprinting report. Science (New York, N.Y.). 260: 473-4. PMID 8475378 DOI: 10.1126/science.8475378 |
0.473 |
|
| 1993 |
Ayala FJ, Hartl DL. Molecular drift of the bride of sevenless (boss) gene in Drosophila. Molecular Biology and Evolution. 10: 1030-40. PMID 8412646 DOI: 10.1093/Oxfordjournals.Molbev.A040052 |
0.4 |
|
| 1993 |
Ochman H, Ayala FJ, Hartl DL. Use of polymerase chain reaction to amplify segments outside boundaries of known sequences Methods in Enzymology. 218: 309-321. PMID 8389965 DOI: 10.1016/0076-6879(93)18023-6 |
0.307 |
|
| 1993 |
Nurminsky DI, Hartl DL. Amplification of the ends of DNA fragments cloned in bacteriophage P1. Biotechniques. 15: 201-2, 206-8. PMID 8373578 |
0.634 |
|
| 1993 |
Hartl DL. Population genetics of microbial organisms. Current Opinion in Genetics & Development. 2: 937-42. PMID 1335810 DOI: 10.1016/S0959-437X(05)80119-4 |
0.401 |
|
| 1992 |
Maruyama K, Hartl DL. Evidence for interspecific transfer of the transposable element mariner between Drosophila and Zaprionus. Journal of Molecular Evolution. 33: 514-24. PMID 1664000 DOI: 10.1007/Bf02102804 |
0.359 |
|
| 1992 |
Lawrence JG, Hartl DL. Inference of horizontal genetic transfer from molecular data: an approach using the bootstrap. Genetics. 131: 753-60. PMID 1628816 |
0.494 |
|
| 1992 |
Hartl DL, Ajioka JW, Cai H, Lohe AR, Lozovskaya ER, Smoller DA, Duncan IW. Towards a Drosophila genome map. Trends in Genetics : Tig. 8: 70-5. PMID 1566375 DOI: 10.1016/0168-9525(92)90353-6 |
0.338 |
|
| 1992 |
Krane DE, Allen RW, Sawyer SA, Petrov DA, Hartl DL. Genetic differences at four DNA typing loci in Finnish, Italian, and mixed Caucasian populations. Proceedings of the National Academy of Sciences of the United States of America. 89: 10583-7. PMID 1438254 DOI: 10.1073/Pnas.89.22.10583 |
0.64 |
|
| 1992 |
Hartl DL, Lozovskaya ER, Lawrence JG. Nonautonomous transposable elements in prokaryotes and eukaryotes. Genetica. 86: 47-53. PMID 1334917 DOI: 10.1007/Bf00133710 |
0.516 |
|
| 1992 |
Capy P, David JR, Hartl DL. Evolution of the transposable element mariner in the Drosophila melanogaster species group. Genetica. 86: 37-46. PMID 1334916 DOI: 10.1007/Bf00133709 |
0.31 |
|
| 1992 |
Lawrence JG, Ochman H, Hartl DL. The evolution of insertion sequences within enteric bacteria. Genetics. 131: 9-20. PMID 1317318 |
0.532 |
|
| 1992 |
Danilevskaya ON, Petrov DA, Pavlova MN, Koga A, Kurenova EV, Hartl DL. A repetitive DNA element, associated with telomeric sequences in Drosophila melanogaster, contains open reading frames. Chromosoma. 102: 32-40. PMID 1291227 DOI: 10.1007/Bf00352288 |
0.62 |
|
| 1991 |
DuBose RF, Hartl DL. The molecular evolution of bacterial alkaline phosphatase: correlating variation among enteric bacteria to experimental manipulations of the protein. Molecular Biology and Evolution. 7: 547-77. PMID 2129542 DOI: 10.1093/Oxfordjournals.Molbev.A040623 |
0.382 |
|
| 1991 |
Lawrence JG, Ochman H, Hartl DL. Molecular and evolutionary relationships among enteric bacteria. Journal of General Microbiology. 137: 1911-21. PMID 1955870 DOI: 10.1099/00221287-137-8-1911 |
0.573 |
|
| 1991 |
Chipperfield M, Maidek M, Pearson P, Ashburner M, Glover DM, Saunders RD, Duncan I, Hartl D, Merriam J, Lee G. Genome maps 1991 [wall chart]. Science (New York, N.Y.). 254: 247-62. PMID 1925580 DOI: 10.1126/Science.1925580 |
0.521 |
|
| 1991 |
Merriam J, Ashburner M, Hartl DL, Kafatos FC. Toward cloning and mapping the genome of Drosophila. Science (New York, N.Y.). 254: 221-5. PMID 1925579 DOI: 10.1126/Science.1925579 |
0.616 |
|
| 1991 |
Palazzolo MJ, Sawyer SA, Martin CH, Smoller DA, Hartl DL. Optimized strategies for sequence-tagged-site selection in genome mapping. Proceedings of the National Academy of Sciences of the United States of America. 88: 8034-8. PMID 1896449 DOI: 10.1073/Pnas.88.18.8034 |
0.324 |
|
| 1991 |
Lewontin RC, Hartl DL. Population genetics in forensic DNA typing. Science (New York, N.Y.). 254: 1745-50. PMID 1845040 DOI: 10.1126/Science.1845040 |
0.585 |
|
| 1991 |
Krane DE, Hartl DL, Ochman H. Rapid determination of nucleotide content and its application to the study of genome structure Nucleic Acids Research. 19: 5181-5185. PMID 1833723 DOI: 10.1093/Nar/19.19.5181 |
0.355 |
|
| 1991 |
Ajioka JW, Smoller DA, Jones RW, Carulli JP, Vellek AE, Garza D, Link AJ, Duncan IW, Hartl DL. Drosophila genome project: one-hit coverage in yeast artificial chromosomes. Chromosoma. 100: 495-509. PMID 1764968 DOI: 10.1007/Bf00352200 |
0.628 |
|
| 1991 |
Smoller DA, Petrov D, Hartl DL. Characterization of bacteriophage P1 library containing inserts of Drosophila DNA of 75-100 kilobase pairs. Chromosoma. 100: 487-94. PMID 1764967 DOI: 10.1007/Bf00352199 |
0.66 |
|
| 1991 |
Lawrence JG, Hartl DL, Ochman H. Molecular considerations in the evolution of bacterial genes. Journal of Molecular Evolution. 33: 241-50. PMID 1757995 DOI: 10.1007/Bf02100675 |
0.601 |
|
| 1991 |
Capy P, Maruyama K, David JR, Hartl DL. Insertion sites of the transposable element mariner are fixed in the genome of Drosophila sechellia. Journal of Molecular Evolution. 33: 450-6. PMID 1660073 DOI: 10.1007/Bf02103137 |
0.327 |
|
| 1991 |
Lawrence JG, Hartl DL. Unusual codon bias occurring within insertion sequences in Escherichia coli. Genetica. 84: 23-9. PMID 1651881 DOI: 10.1007/Bf00123981 |
0.569 |
|
| 1991 |
Garza D, Medhora M, Koga A, Hartl DL. Introduction of the transposable element mariner into the germline of Drosophila melanogaster. Genetics. 128: 303-10. PMID 1649067 |
0.571 |
|
| 1991 |
Hartl DL, Sawyer SA. Inference of selection and recombination from nucleotide sequence data Journal of Evolutionary Biology. 4: 519-532. DOI: 10.1046/J.1420-9101.1991.4040519.X |
0.349 |
|
| 1991 |
Danilevskaya ON, Kurenova EV, Pavlova MN, Bebehov DV, Link AJ, Koga A, Vellek A, Hartl DL. He-T family DNA sequences in the Y chromosome of Drosophila melanogaster share homology with the X-linked Stellate genes Chromosoma. 100: 118-124. DOI: 10.1007/Bf00418245 |
0.357 |
|
| 1990 |
Hartl DL. The physiology of weak selection. Genome. 31: 183-9. PMID 2687089 DOI: 10.1139/G89-032 |
0.337 |
|
| 1990 |
Garza D, Medhora MM, Hartl DL. Drosophila nonsense suppressors: functional analysis in Saccharomyces cerevisiae, Drosophila tissue culture cells and Drosophila melanogaster. Genetics. 126: 625-37. PMID 2174393 |
0.568 |
|
| 1990 |
Capy P, Chakrani F, Lemeunier F, Hartl DL, David JR. Active mariner transposable elements are widespread in natural populations of Drosophila simulans. Proceedings. Biological Sciences / the Royal Society. 242: 57-60. PMID 1980741 DOI: 10.1098/Rspb.1990.0103 |
0.316 |
|
| 1990 |
Ochman H, Ajioka JW, Garza D, Hartl DL. Inverse polymerase chain reaction. Bio/Technology (Nature Publishing Company). 8: 759-60. PMID 1366903 DOI: 10.1038/Nbt0890-759 |
0.587 |
|
| 1989 |
Lawrence JG, Dykhuizen DE, DuBose RF, Hartl DL. Phylogenetic analysis using insertion sequence fingerprinting in Escherichia coli. Molecular Biology and Evolution. 6: 1-14. PMID 2564160 DOI: 10.1093/Oxfordjournals.Molbev.A040531 |
0.784 |
|
| 1989 |
Garza D, Ajioka JW, Burke DT, Hartl DL. Mapping the Drosophila genome with yeast artificial chromosomes. Science (New York, N.Y.). 246: 641-6. PMID 2510296 DOI: 10.1126/Science.2510296 |
0.641 |
|
| 1989 |
Garza D, Ajioka JW, Carulli J, Jones RW, Johnson DH, Hartl DL. Physical mapping of complex genomes Nature. 340: 577-578. DOI: 10.1038/340577A0 |
0.559 |
|
| 1988 |
Stebbins GL, Hartl DL. Comparative evolution: latent potentials for anagenetic advance. Proceedings of the National Academy of Sciences of the United States of America. 85: 5141-5. PMID 3293050 DOI: 10.1073/Pnas.85.14.5141 |
0.356 |
|
| 1988 |
Dean AM, Dykhuizen DE, Hartl DL. Fitness effects of amino acid replacements in the beta-galactosidase of Escherichia coli. Molecular Biology and Evolution. 5: 469-85. PMID 3143044 DOI: 10.1093/Oxfordjournals.Molbev.A040513 |
0.776 |
|
| 1988 |
DuBose RF, Dykhuizen DE, Hartl DL. Genetic exchange among natural isolates of bacteria: recombination within the phoA gene of Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 85: 7036-40. PMID 3045828 DOI: 10.1073/Pnas.85.18.7036 |
0.766 |
|
| 1988 |
Bryan GJ, Hartl DL. Maternally inherited transposon excision in Drosophila simulans. Science (New York, N.Y.). 240: 215-7. PMID 2832948 DOI: 10.1126/Science.2832948 |
0.365 |
|
| 1988 |
Miller RD, Dykhuizen DE, Hartl DL. Fitness effects of a deletion mutation increasing transcription of the 6-phosphogluconate dehydrogenase gene in Escherichia coli. Molecular Biology and Evolution. 5: 691-703. PMID 2464736 DOI: 10.1093/Oxfordjournals.Molbev.A040522 |
0.757 |
|
| 1988 |
Medhora MM, MacPeek AH, Hartl DL. Excision of the Drosophila transposable element mariner: identification and characterization of the Mos factor. The Embo Journal. 7: 2185-2189. DOI: 10.1002/J.1460-2075.1988.Tb03057.X |
0.339 |
|
| 1987 |
Sawyer SA, Dykhuizen DE, Hartl DL. Confidence interval for the number of selectively neutral amino acid polymorphisms. Proceedings of the National Academy of Sciences of the United States of America. 84: 6225-8. PMID 3306673 DOI: 10.1073/Pnas.84.17.6225 |
0.738 |
|
| 1987 |
Dykhuizen DE, Dean AM, Hartl DL. Metabolic flux and fitness. Genetics. 115: 25-31. PMID 3104135 |
0.775 |
|
| 1987 |
Sawyer SA, Dykhuizen DE, DuBose RF, Green L, Mutangadura-Mhlanga T, Wolczyk DF, Hartl DL. Distribution and abundance of insertion sequences among natural isolates of Escherichia coli. Genetics. 115: 51-63. PMID 3030884 |
0.731 |
|
| 1987 |
Bryan GJ, Jacobson JW, Hartl DL. Heritable somatic excision of a Drosophila transposon. Science (New York, N.Y.). 235: 1636-8. PMID 3029874 DOI: 10.1126/Science.3029874 |
0.383 |
|
| 1987 |
Scavarda NJ, Hartl DL. Germ line abnormalities InDrosophila simulans transfected with the transposable P element Journal of Genetics. 66: 1-15. DOI: 10.1007/Bf02934451 |
0.341 |
|
| 1986 |
Hartl DL, Dean AM, Dykhuizen DE. The molecular biology of natural selection: reply to burton and place. Genetics. 114: 1037-9. PMID 17246353 |
0.752 |
|
| 1986 |
Dean AM, Dykhuizen DE, Hartl DL. Fitness as a function of beta-galactosidase activity in Escherichia coli. Genetical Research. 48: 1-8. PMID 3096817 DOI: 10.1017/S0016672300024587 |
0.745 |
|
| 1986 |
Jacobson JW, Medhora MM, Hartl DL. Molecular structure of a somatically unstable transposable element in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 83: 8684-8. PMID 3022302 DOI: 10.1073/Pnas.83.22.8684 |
0.387 |
|
| 1986 |
Sawyer S, Hartl D. Distribution of transposable elements in prokaryotes. Theoretical Population Biology. 30: 1-16. PMID 3018953 DOI: 10.1016/0040-5809(86)90021-3 |
0.335 |
|
| 1986 |
Hartl DL, Medhora M, Green L, Dykhuizen DE. The evolution of DNA sequences in Escherichia coli. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 312: 191-204. PMID 2870515 DOI: 10.1098/Rstb.1986.0001 |
0.739 |
|
| 1985 |
Dykhuizen DE, Mudd C, Honeycutt A, Hartl DL. POLYMORPHIC POSTTRANSLATIONAL MODIFICATION OF ALKALINE PHOSPHATASE IN ESCHERICHIA COLI. Evolution; International Journal of Organic Evolution. 39: 1-7. PMID 28563640 DOI: 10.1111/J.1558-5646.1985.Tb04075.X |
0.736 |
|
| 1985 |
Scavarda NJ, Hartl DL. Interspecific DNA transformation in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 81: 7515-9. PMID 6095302 DOI: 10.1073/Pnas.81.23.7515 |
0.382 |
|
| 1985 |
Hartl DL, Dykhuizen DE, Dean AM. Limits of adaptation: the evolution of selective neutrality. Genetics. 111: 655-74. PMID 3932127 |
0.767 |
|
| 1985 |
Behlke MA, Spinella DG, Chou HS, Sha W, Hartl DL, Loh DY. T-cell receptor β-chain expression: Dependence on relatively few variable region genes Science. 229: 566-570. PMID 3875151 DOI: 10.1126/Science.3875151 |
0.328 |
|
| 1985 |
Dykhuizen DE, Sawyer SA, Green L, Miller RD, Hartl DL. Joint distribution of insertion elements IS4 and IS5 in natural isolates of Escherichia coli. Genetics. 111: 219-31. PMID 2996976 |
0.717 |
|
| 1985 |
Sawyer S, Hartl D. A sampling theory for local selection Journal of Genetics. 64: 21-29. DOI: 10.1007/Bf02923550 |
0.309 |
|
| 1984 |
Dykhuizen DE, de Framond J, Hartl DL. Selective neutrality of glucose-6-phosphate dehydrogenase allozymes in Escherichia coli. Molecular Biology and Evolution. 1: 162-70. PMID 6400649 DOI: 10.1093/Oxfordjournals.Molbev.A040309 |
0.725 |
|
| 1984 |
Miller RD, Dykhuizen DE, Green L, Hartl DL. Specific deletion occurring in the directed evolution of 6-phosphogluconate dehydrogenase in Escherichia coli. Genetics. 108: 765-72. PMID 6392014 |
0.731 |
|
| 1984 |
Dykhuizen DE, de Framond J, Hartl DL. Potential for hitchhiking in the eda-edd-zwf gene cluster of Escherichia coli. Genetical Research. 43: 229-39. PMID 6381229 DOI: 10.1017/S0016672300026021 |
0.715 |
|
| 1984 |
Hartl DL, Dykhuizen DE, Berg DE. Accessory DNAs in the bacterial gene pool: playground for coevolution. Ciba Foundation Symposium. 102: 233-45. PMID 6319094 DOI: 10.1002/9780470720837.ch15 |
0.751 |
|
| 1984 |
Hartl DL, Dykhuizen DE. The population genetics of Escherichia coli. Annual Review of Genetics. 18: 31-68. PMID 6099090 DOI: 10.1146/Annurev.Ge.18.120184.000335 |
0.744 |
|
| 1984 |
Green L, Miller RD, Dykhuizen DE, Hartl DL. Distribution of DNA insertion element IS5 in natural isolates of Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 81: 4500-4. PMID 6087327 DOI: 10.1073/Pnas.81.14.4500 |
0.732 |
|
| 1983 |
Dykhuizen DE, Hartl DL. Functional effects of PGI allozymes in Escherichia coli. Genetics. 105: 1-18. PMID 6352406 |
0.718 |
|
| 1983 |
Hartl DL, Dykhuizen DE, Miller RD, Green L, de Framond J. Transposable element IS50 improves growth rate of E. coli cells without transposition. Cell. 35: 503-10. PMID 6317194 DOI: 10.1016/0092-8674(83)90184-8 |
0.743 |
|
| 1983 |
Dykhuizen DE, Hartl DL. Selection in chemostats. Microbiological Reviews. 47: 150-68. PMID 6308409 DOI: 10.1128/Mmbr.47.2.150-168.1983 |
0.71 |
|
| 1981 |
Dykhuizen D, Hartl D. EVOLUTION OF COMPETITIVE ABILITY IN ESCHERICHIA COLI. Evolution; International Journal of Organic Evolution. 35: 581-594. PMID 28563589 DOI: 10.1111/J.1558-5646.1981.Tb04919.X |
0.744 |
|
| 1981 |
Hartl DL, Dykhuizen DE. Potential for selection among nearly neutral allozymes of 6-phosphogluconate dehydrogenase in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 78: 6344-8. PMID 7031648 DOI: 10.1073/Pnas.78.10.6344 |
0.746 |
|
| 1981 |
Sawyer S, Hartl D. On the evolution of behavioral reproductive isolation: The Wallace effect Theoretical Population Biology. 19: 261-273. DOI: 10.1016/0040-5809(81)90021-6 |
0.308 |
|
| 1980 |
Dykhuizen D, Hartl DL. Selective neutrality of 6PGD allozymes in E. coli and the effects of genetic background. Genetics. 96: 801-17. PMID 7021316 |
0.729 |
|
| 1980 |
Dykhuizen D, Hartl D. Molecular clockwork (reply) Nature. 287: 90. DOI: 10.1038/287090A0 |
0.682 |
|
| 1979 |
Hartl D, Dykhuizen D. A selectively driven molecular clock. Nature. 281: 230-1. PMID 384266 DOI: 10.1038/281230A0 |
0.746 |
|
| 1978 |
Dykhuizen D, Hartl D. Transport by the lactose permease of Escherichia coli as the basis of lactose killing. Journal of Bacteriology. 135: 876-82. PMID 99437 DOI: 10.1128/JB.135.3.876-882.1978 |
0.67 |
|
| 1977 |
Hartl DL. Stochastic selection in both haplophase and diplophase. Journal of Mathematical Biology. 3: 263-9. PMID 1035610 DOI: 10.1007/Bf00275059 |
0.361 |
|
| 1977 |
Hartl DL. Mechanism of a case of genetic coadaptation in populations of Drosophila melanogaster. Proceedings of the National Academy of Sciences of the United States of America. 74: 324-8. PMID 402005 DOI: 10.1073/Pnas.74.1.324 |
0.325 |
|
| 1975 |
Hartl DL, Hartung N. HIGH FREQUENCY OF ONE ELEMENT OF SEGREGATION DISTORTER IN NATURAL POPULATIONS OF DROSOPHILA MELANOGASTER. Evolution; International Journal of Organic Evolution. 29: 512-518. PMID 28563187 DOI: 10.1111/J.1558-5646.1975.Tb00840.X |
0.329 |
|
| 1973 |
Hartl DL, Cook RD. Balanced polymorphisms of quasineutral alleles Theoretical Population Biology. 4: 163-172. DOI: 10.1016/0040-5809(73)90026-9 |
0.355 |
|
| 1970 |
Hartl DL. POPULATION CONSEQUENCES OF NON-MENDELIAN SEGREGATION AMONG MULTIPLE ALLELES. Evolution; International Journal of Organic Evolution. 24: 415-423. PMID 28565066 DOI: 10.1111/J.1558-5646.1970.Tb01772.X |
0.377 |
|
| 1969 |
Hartl DL, Maruyama T. Phenogram enumeration: the number of regular genotype-phenotype correspondences in genetic systems. Journal of Theoretical Biology. 20: 129-63. PMID 5727236 DOI: 10.1016/0022-5193(68)90186-0 |
0.313 |
|
| 1967 |
Hartl DL, Hiraizumi Y, Crow JF. Evidence for sperm dysfunction as the mechanism of segregation distortion in Drosophila melanogaster. Proceedings of the National Academy of Sciences of the United States of America. 58: 2240-5. PMID 5242201 DOI: 10.1073/Pnas.58.6.2240 |
0.676 |
|
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