| Year |
Citation |
Score |
| 2014 |
Shanmugam AK, Yocum AK, Nesvizhskii AI. Utility of RNA-seq and GPMDB protein observation frequency for improving the sensitivity of protein identification by tandem MS. Journal of Proteome Research. 13: 4113-9. PMID 25026199 DOI: 10.1021/Pr500496P |
0.504 |
|
| 2011 |
Fermin D, Basrur V, Yocum AK, Nesvizhskii AI. Abacus: a computational tool for extracting and pre-processing spectral count data for label-free quantitative proteomic analysis. Proteomics. 11: 1340-5. PMID 21360675 DOI: 10.1002/Pmic.201000650 |
0.326 |
|
| 2010 |
Yocum AK, Khan AP, Zhao R, Chinnaiyan AM. Development of selected reaction monitoring-MS methodology to measure peptide biomarkers in prostate cancer. Proteomics. 10: 3506-14. PMID 20821805 DOI: 10.1002/pmic.201000023 |
0.328 |
|
| 2010 |
Omenn GS, Yocum AK, Menon R. Alternative splice variants, a new class of protein cancer biomarker candidates: findings in pancreatic cancer and breast cancer with systems biology implications. Disease Markers. 28: 241-51. PMID 20534909 DOI: 10.3233/DMA-2010-0702 |
0.372 |
|
| 2009 |
Yocum AK, Chinnaiyan AM. Current affairs in quantitative targeted proteomics: multiple reaction monitoring-mass spectrometry. Briefings in Functional Genomics & Proteomics. 8: 145-57. PMID 19279071 DOI: 10.1093/bfgp/eln056 |
0.511 |
|
| 2009 |
Ulintz PJ, Yocum AK, Bodenmiller B, Aebersold R, Andrews PC, Nesvizhskii AI. Comparison of MS(2)-only, MSA, and MS(2)/MS(3) methodologies for phosphopeptide identification. Journal of Proteome Research. 8: 887-99. PMID 19072539 DOI: 10.1021/Pr800535H |
0.383 |
|
| 2008 |
Falkner JA, Falkner JW, Yocum AK, Andrews PC. A spectral clustering approach to MS/MS identification of post-translational modifications. Journal of Proteome Research. 7: 4614-22. PMID 18800783 DOI: 10.1021/Pr800226W |
0.358 |
|
| 2008 |
Yocum AK, Gratsch TE, Leff N, Strahler JR, Hunter CL, Walker AK, Michailidis G, Omenn GS, O'Shea KS, Andrews PC. Coupled global and targeted proteomics of human embryonic stem cells during induced differentiation. Molecular & Cellular Proteomics : McP. 7: 750-67. PMID 18304949 DOI: 10.1074/Mcp.M700399-Mcp200 |
0.376 |
|
| 2008 |
Lucitt MB, Price TS, Pizarro A, Wu W, Yocum AK, Seiler C, Pack MA, Blair IA, Fitzgerald GA, Grosser T. Analysis of the zebrafish proteome during embryonic development. Molecular & Cellular Proteomics : McP. 7: 981-94. PMID 18212345 DOI: 10.1074/Mcp.M700382-Mcp200 |
0.556 |
|
| 2007 |
Price TS, Lucitt MB, Wu W, Austin DJ, Pizarro A, Yocum AK, Blair IA, FitzGerald GA, Grosser T. EBP, a program for protein identification using multiple tandem mass spectrometry datasets. Molecular & Cellular Proteomics : McP. 6: 527-36. PMID 17164401 DOI: 10.1074/Mcp.T600049-Mcp200 |
0.55 |
|
| 2006 |
Yocum AK, Busch CM, Felix CA, Blair IA. Proteomics-based strategy to identify biomarkers and pharmacological targets in leukemias with t(4;11) translocations. Journal of Proteome Research. 5: 2743-53. PMID 17022645 DOI: 10.1021/Pr060235V |
0.517 |
|
| 2005 |
Yocum AK, Yu K, Oe T, Blair IA. Effect of immunoaffinity depletion of human serum during proteomic investigations. Journal of Proteome Research. 4: 1722-31. PMID 16212426 DOI: 10.1021/Pr0501721 |
0.509 |
|
| 2005 |
Yocum AK, Oe T, Yergey AL, Blair IA. Novel lipid hydroperoxide-derived hemoglobin histidine adducts as biomarkers of oxidative stress. Journal of Mass Spectrometry : Jms. 40: 754-64. PMID 15827957 DOI: 10.1002/Jms.847 |
0.474 |
|
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