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Elisabeth J. Chapman, Ph.D. - Publications

Affiliations: 
2007 Oregon State University, Corvallis, OR 
Area:
Molecular Biology, Virology Biology
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25 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 José Ripoll J, Bailey LJ, Mai QA, Wu SL, Hon CT, Chapman EJ, Ditta GS, Estelle M, Yanofsky MF. microRNA regulation of fruit growth. Nature Plants. 1: 15036. PMID 27247036 DOI: 10.1038/Nplants.2015.36  0.316
2015 Garcia-Ruiz H, Takeda A, Chapman EJ, Sullivan CM, Fahlgren N, Brempelis KJ, Carrington JC. Correction. Arabidopsis RNA-dependent RNA polymerases and dicer-like proteins in antiviral defense and small interfering RNA biogenesis during Turnip mosaic virus infection. The Plant Cell. 27: 944-5. PMID 25783032 DOI: 10.1105/tpc.15.00204  0.788
2014 Gilbert KB, Fahlgren N, Kasschau KD, Chapman EJ, Carrington JC, Carbonell A. Preparation of Multiplexed Small RNA Libraries From Plants. Bio-Protocol. 4. PMID 26661568 DOI: 10.21769/BIOPROTOC.1275  0.784
2013 Fahlgren N, Bollmann SR, Kasschau KD, Cuperus JT, Press CM, Sullivan CM, Chapman EJ, Hoyer JS, Gilbert KB, Grünwald NJ, Carrington JC. Phytophthora have distinct endogenous small RNA populations that include short interfering and microRNAs. Plos One. 8: e77181. PMID 24204767 DOI: 10.1371/Journal.Pone.0077181  0.809
2013 Fahlgren N, Bollmann SR, Kasschau KD, Cuperus JT, Press CM, Sullivan CM, Chapman EJ, Hoyer JS, Gilbert KB, Grünwald NJ, Carrington JC. Dcl , Rdr , Ago and MIRNA genes in three Phytophthora species. Plos One. DOI: 10.1371/Journal.Pone.0077181.T001  0.711
2013 Fahlgren N, Bollmann SR, Kasschau KD, Cuperus JT, Press CM, Sullivan CM, Chapman EJ, Hoyer JS, Gilbert KB, Grünwald NJ, Carrington JC. Computational and molecular characterization of Phytophthora MIRNA genes. Plos One. DOI: 10.1371/Journal.Pone.0077181.G006  0.702
2012 Chapman EJ, Greenham K, Castillejo C, Sartor R, Bialy A, Sun TP, Estelle M. Hypocotyl transcriptome reveals auxin regulation of growth-promoting genes through GA-dependent and -independent pathways. Plos One. 7: e36210. PMID 22590525 DOI: 10.1371/Journal.Pone.0036210  0.307
2010 Fahlgren N, Jogdeo S, Kasschau KD, Sullivan CM, Chapman EJ, Laubinger S, Smith LM, Dasenko M, Givan SA, Weigel D, Carrington JC. MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana. The Plant Cell. 22: 1074-89. PMID 20407027 DOI: 10.1105/Tpc.110.073999  0.781
2010 Garcia-Ruiz H, Takeda A, Chapman EJ, Sullivan CM, Fahlgren N, Brempelis KJ, Carrington JC. Arabidopsis RNA-dependent RNA polymerases and dicer-like proteins in antiviral defense and small interfering RNA biogenesis during Turnip mosaic virus infection Plant Cell. 22: 481-496. PMID 20190077 DOI: 10.1105/Tpc.109.073056  0.797
2010 Vogel JP, Garvin DF, Mockler TC, Schmutz J, Rokhsar D, Bevan MW, Barry K, Lucas S, Harmon-Smith M, Lail K, Tice H, Grimwood J, McKenzie N, Huo N, Gu YQ, ... ... Chapman EJ, et al. Genome sequencing and analysis of the model grass Brachypodium distachyon Nature. 463: 763-768. PMID 20148030 DOI: 10.1038/Nature08747  0.697
2009 Ha M, Lu J, Tian L, Ramachandran V, Kasschau KD, Chapman EJ, Carrington JC, Chen X, Wang XJ, Chen ZJ. Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids. Proceedings of the National Academy of Sciences of the United States of America. 106: 17835-40. PMID 19805056 DOI: 10.1073/Pnas.0907003106  0.73
2009 Chapman EJ, Estelle M. Mechanism of auxin-regulated gene expression in plants. Annual Review of Genetics. 43: 265-85. PMID 19686081 DOI: 10.1146/Annurev-Genet-102108-134148  0.326
2009 Fahlgren N, Sullivan CM, Kasschau KD, Chapman EJ, Cumbie JS, Montgomery TA, Gilbert SD, Dasenko M, Backman TW, Givan SA, Carrington JC. Computational and analytical framework for small RNA profiling by high-throughput sequencing. Rna (New York, N.Y.). 15: 992-1002. PMID 19307293 DOI: 10.1261/Rna.1473809  0.79
2008 Montgomery TA, Howell MD, Cuperus JT, Li D, Hansen JE, Alexander AL, Chapman EJ, Fahlgren N, Allen E, Carrington JC. Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formation. Cell. 133: 128-41. PMID 18342362 DOI: 10.1016/J.Cell.2008.02.033  0.75
2008 Backman TW, Sullivan CM, Cumbie JS, Miller ZA, Chapman EJ, Fahlgren N, Givan SA, Carrington JC, Kasschau KD. Update of ASRP: the Arabidopsis Small RNA Project database. Nucleic Acids Research. 36: D982-5. PMID 17999994 DOI: 10.1093/Nar/Gkm997  0.778
2007 Chapman EJ, Carrington JC. Specialization and evolution of endogenous small RNA pathways. Nature Reviews. Genetics. 8: 884-96. PMID 17943195 DOI: 10.1038/Nrg2179  0.737
2007 Howell MD, Fahlgren N, Chapman EJ, Cumbie JS, Sullivan CM, Givan SA, Kasschau KD, Carrington JC. Genome-wide analysis of the RNA-DEPENDENT RNA POLYMERASE6/DICER-LIKE4 pathway in Arabidopsis reveals dependency on miRNA- and tasiRNA-directed targeting. The Plant Cell. 19: 926-42. PMID 17400893 DOI: 10.1105/Tpc.107.050062  0.828
2007 Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC. High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes. Plos One. 2: e219. PMID 17299599 DOI: 10.1371/Journal.Pone.0000219  0.775
2007 Kasschau KD, Fahlgren N, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Carrington JC. Genome-wide profiling and analysis of Arabidopsis siRNAs. Plos Biology. 5: e57. PMID 17298187 DOI: 10.1371/Journal.Pbio.0050057  0.808
2006 Lakatos L, Csorba T, Pantaleo V, Chapman EJ, Carrington JC, Liu YP, Dolja VV, Calvino LF, López-Moya JJ, Burgyán J. Small RNA binding is a common strategy to suppress RNA silencing by several viral suppressors. The Embo Journal. 25: 2768-80. PMID 16724105 DOI: 10.1038/Sj.Emboj.7601164  0.724
2006 Yu B, Chapman EJ, Yang Z, Carrington JC, Chen X. Transgenically expressed viral RNA silencing suppressors interfere with microRNA methylation in Arabidopsis. Febs Letters. 580: 3117-20. PMID 16678167 DOI: 10.1016/J.Febslet.2006.04.063  0.678
2006 Chiba M, Reed JC, Prokhnevsky AI, Chapman EJ, Mawassi M, Koonin EV, Carrington JC, Dolja VV. Diverse suppressors of RNA silencing enhance agroinfection by a viral replicon. Virology. 346: 7-14. PMID 16300814 DOI: 10.1016/J.Virol.2005.09.068  0.684
2004 Chapman EJ, Prokhnevsky AI, Gopinath K, Dolja VV, Carrington JC. Viral RNA silencing suppressors inhibit the microRNA pathway at an intermediate step. Genes & Development. 18: 1179-86. PMID 15131083 DOI: 10.1101/Gad.1201204  0.74
2003 Chapman EJ, Hilson P, German TL. Association of L protein and in vitro tomato spotted wilt virus RNA-dependent RNA polymerase activity. Intervirology. 46: 177-81. PMID 12867756 DOI: 10.1159/000071459  0.413
2003 Kasschau KD, Xie Z, Allen E, Llave C, Chapman EJ, Krizan KA, Carrington JC. P1/HC-Pro, a viral suppressor of RNA silencing, interferes with Arabidopsis development and miRNA unction. Developmental Cell. 4: 205-17. PMID 12586064 DOI: 10.1016/S1534-5807(03)00025-X  0.745
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