| Year |
Citation |
Score |
| 2024 |
Scaletti C, Russell PPS, Hebel KJ, Rickard MM, Boob M, Danksagmüller F, Taylor SA, Pogorelov TV, Gruebele M. Hydrogen bonding heterogeneity correlates with protein folding transition state passage time as revealed by data sonification. Proceedings of the National Academy of Sciences of the United States of America. 121: e2319094121. PMID 38768341 DOI: 10.1073/pnas.2319094121 |
0.806 |
|
| 2024 |
Samuel Russell PP, Maytin AK, Rickard MM, Russell MC, Pogorelov TV, Gruebele M. Metastable States in the Hinge-Bending Landscape of an Enzyme in an Atomistic Cytoplasm Simulation. The Journal of Physical Chemistry Letters. 940-946. PMID 38252018 DOI: 10.1021/acs.jpclett.3c03134 |
0.797 |
|
| 2023 |
Chang R, Gruebele M, Leckband DE. Protein Folding Stability and Kinetics in Alginate Hydrogels. Biomacromolecules. 24: 5245-5254. PMID 37906737 DOI: 10.1021/acs.biomac.3c00764 |
0.623 |
|
| 2023 |
Russell PPS, Rickard MM, Boob M, Gruebele M, Pogorelov TV. In silico protein dynamics in the human cytoplasm: Partial folding, misfolding, fold switching, and non-native interactions. Protein Science : a Publication of the Protein Society. 32: e4790. PMID 37774143 DOI: 10.1002/pro.4790 |
0.822 |
|
| 2023 |
Gross N, Kuhs CT, Ostovar B, Chiang WY, Wilson KS, Volek TS, Faitz ZM, Carlin CC, Dionne JA, Zanni MT, Gruebele M, Roberts ST, Link S, Landes CF. Progress and Prospects in Optical Ultrafast Microscopy in the Visible Spectral Region: Transient Absorption and Two-Dimensional Microscopy. The Journal of Physical Chemistry. C, Nanomaterials and Interfaces. 127: 14557-14586. PMID 37554548 DOI: 10.1021/acs.jpcc.3c02091 |
0.508 |
|
| 2023 |
Boob MM, Sukenik S, Gruebele M, Pogorelov TV. TMAO: Protecting proteins from feeling the heat. Biophysical Journal. 122: 1414-1422. PMID 36916005 DOI: 10.1016/j.bpj.2023.03.008 |
0.719 |
|
| 2022 |
Rickard MM, Luo H, De Lio A, Gruebele M, Pogorelov TV. Impact of the Cellular Environment on Adenosine Triphosphate Conformations. The Journal of Physical Chemistry Letters. 9809-9814. PMID 36228115 DOI: 10.1021/acs.jpclett.2c02375 |
0.82 |
|
| 2022 |
Tripathi P, Firouzbakht A, Gruebele M, Wanunu M. Threading single proteins through pores to compare their energy landscapes. Proceedings of the National Academy of Sciences of the United States of America. 119: e2202779119. PMID 36122213 DOI: 10.1073/pnas.2202779119 |
0.316 |
|
| 2022 |
Chang R, Gruebele M, Leckband DE. Protein Stabilization by Alginate Binding and Suppression of Thermal Aggregation. Biomacromolecules. 23: 4063-4073. PMID 36054903 DOI: 10.1021/acs.biomac.2c00297 |
0.593 |
|
| 2022 |
Gopan G, Ghaemi Z, Davis CM, Gruebele M. Spliceosomal SL1 RNA binding to U1-70K: the role of the extended RRM. Nucleic Acids Research. PMID 35876068 DOI: 10.1093/nar/gkac599 |
0.654 |
|
| 2022 |
Tripathi P, Firouzbakht A, Gruebele M, Wanunu M. Direct Observation of Single-Protein Transition State Passage by Nanopore Ionic Current Jumps. The Journal of Physical Chemistry Letters. 13: 5918-5924. PMID 35731125 DOI: 10.1021/acs.jpclett.2c01009 |
0.313 |
|
| 2021 |
Mora-Sierra Z, Gopan G, Chang R, Leckband DE, Gruebele M. Stabilization and Kinetics of an Adsorbed Protein Depends on the Poly(-isopropylacrylamide) Grafting Density. Biomacromolecules. 22: 4470-4478. PMID 34606244 DOI: 10.1021/acs.biomac.1c00417 |
0.594 |
|
| 2021 |
Davis CM, Gruebele M. Cellular Sticking Can Strongly Reduce Complex Binding by Speeding Dissociation. The Journal of Physical Chemistry. B. PMID 33826329 DOI: 10.1021/acs.jpcb.1c00950 |
0.66 |
|
| 2021 |
Gruebele M, Pielak GJ. Dynamical spectroscopy and microscopy of proteins in cells. Current Opinion in Structural Biology. 70: 1-7. PMID 33662744 DOI: 10.1016/j.sbi.2021.02.001 |
0.304 |
|
| 2020 |
Gopan G, Gruebele M, Rickard M. In-cell protein landscapes: making the match between theory, simulation and experiment. Current Opinion in Structural Biology. 66: 163-169. PMID 33254078 DOI: 10.1016/j.sbi.2020.10.013 |
0.813 |
|
| 2020 |
Davis CM, Gruebele M. Cytoskeletal Drugs Modulate Off-Target Protein Folding Landscapes Inside Cells. Biochemistry. PMID 32567840 DOI: 10.1021/Acs.Biochem.0C00299 |
0.657 |
|
| 2020 |
Rickard MM, Zhang Y, Pogorelov TV, Gruebele M. Crowding, Sticking, and Partial Folding of GTT WW Domain in a Small Cytoplasm Model. The Journal of Physical Chemistry. B. 124: 4732-4740. PMID 32463238 DOI: 10.1021/Acs.Jpcb.0C02536 |
0.745 |
|
| 2020 |
Guin DA, Gruebele M. The Chaperones Hsc70 and Hsp70 Bind the Protein PGK Differently Inside Living Cells. The Journal of Physical Chemistry. B. PMID 32275442 DOI: 10.1021/Acs.Jpcb.0C00519 |
0.331 |
|
| 2020 |
Davis CM, Deutsch J, Gruebele M. An in vitro mimic of in-cell solvation for protein folding studies. Protein Science : a Publication of the Protein Society. PMID 31994240 DOI: 10.1002/Pro.3833 |
0.716 |
|
| 2020 |
Davis C, Gruebele M. Quinary Structure Modulates Consensus Protein Sequence Stability in Cells Biophysical Journal. 118. DOI: 10.1016/J.Bpj.2019.11.2671 |
0.685 |
|
| 2020 |
Wang Y, Unnikrishnan M, Ramsey B, Gruebele M. Quantifying Protein-Protein Binding Interaction in vitro and in Cells Biophysical Journal. 118. DOI: 10.1016/J.Bpj.2019.11.1217 |
0.372 |
|
| 2020 |
Mittal S, Guin D, Bozymski B, Shukla D, Gruebele M. Is Dodine a Protein Stabilizer or Destabilizer? It'S Complicated! Biophysical Journal. 118. DOI: 10.1016/J.Bpj.2019.11.1198 |
0.347 |
|
| 2019 |
Gasic AG, Boob MM, Prigozhin MB, Homouz D, Wirth AJ, Daugherty CM, Gruebele M, Cheung MS. Critical phenomena in the temperature-pressure-crowding phase diagram of a protein. Physical Review. X. 9. PMID 32642303 DOI: 10.1103/Physrevx.9.041035 |
0.809 |
|
| 2019 |
Nguyen HA, Liao C, Wallum A, Lyding J, Gruebele M. Multi-scale dynamics at the glassy silica surface. The Journal of Chemical Physics. 151: 174502. PMID 31703525 DOI: 10.1063/1.5123228 |
0.56 |
|
| 2019 |
Dave K, Gasic AG, Cheung MS, Gruebele M. Competition of individual domain folding with inter-domain interaction in WW domain engineered repeat proteins. Physical Chemistry Chemical Physics : Pccp. PMID 31663524 DOI: 10.1039/C8Cp07775D |
0.805 |
|
| 2019 |
Guin D, Gelman H, Wang Y, Gruebele M. Heat shock-induced chaperoning by Hsp70 is enabled in-cell. Plos One. 14: e0222990. PMID 31557226 DOI: 10.1371/Journal.Pone.0222990 |
0.729 |
|
| 2019 |
Rickard MM, Zhang Y, Gruebele M, Pogorelov TV. In-Cell Protein-Protein Contacts: Transient Interactions in the Crowd. The Journal of Physical Chemistry Letters. 5667-5673. PMID 31483661 DOI: 10.1021/Acs.Jpclett.9B01556 |
0.817 |
|
| 2019 |
Boob M, Wang Y, Gruebele M. Proteins: 'Boil 'Em, Mash 'Em, Stick 'Em in a Stew'. The Journal of Physical Chemistry. B. PMID 31386813 DOI: 10.1021/Acs.Jpcb.9B05467 |
0.39 |
|
| 2019 |
Guin D, Gruebele M. Weak Chemical Interactions That Drive Protein Evolution: Crowding, Sticking, and Quinary Structure in Folding and Function. Chemical Reviews. PMID 31356058 DOI: 10.1021/Acs.Chemrev.8B00753 |
0.4 |
|
| 2019 |
Chen J, Wang J, Li K, Wang Y, Gruebele M, Ferguson AL, Zimmerman SC. Polymeric "Clickase" Accelerates the Copper Click Reaction of Small Molecules, Proteins, and Cells. Journal of the American Chemical Society. PMID 31124359 DOI: 10.1021/Jacs.9B04181 |
0.316 |
|
| 2019 |
Guin D, Mittal S, Bozymski B, Shukla D, Gruebele M. Dodine as a Kosmo-Chaotropic Agent. The Journal of Physical Chemistry Letters. PMID 31026167 DOI: 10.1021/Acs.Jpclett.9B00379 |
0.449 |
|
| 2019 |
Feng R, Gruebele M, Davis CM. Quantifying protein dynamics and stability in a living organism. Nature Communications. 10: 1179. PMID 30862837 DOI: 10.1038/S41467-019-09088-Y |
0.695 |
|
| 2019 |
Perlova T, Gruebele M, Chemla YR. Blue light is a universal signal for chemoreceptors. Journal of Bacteriology. PMID 30858302 DOI: 10.1128/Jb.00762-18 |
0.763 |
|
| 2019 |
Prigozhin MB, Zhang Y, Schulten K, Gruebele M, Pogorelov TV. Fast pressure-jump all-atom simulations and experiments reveal site-specific protein dehydration-folding dynamics. Proceedings of the National Academy of Sciences of the United States of America. PMID 30837309 DOI: 10.1073/Pnas.1814927116 |
0.822 |
|
| 2019 |
Nguyen D, Wallum A, Nguyen HA, Nguyen NT, Lyding JW, Gruebele M. Imaging of Carbon Nanotube Electronic States Polarized by the Field of an Excited Quantum Dot. Acs Nano. PMID 30605600 DOI: 10.1021/Acsnano.8B06806 |
0.537 |
|
| 2019 |
Wang Y, Davis C, Holehouse AS, Gruebele M, Sukenik S. Changes to the Intracellular Milieu Control the Population and Residual Structure of Unfolded Proteins Biophysical Journal. 116: 178a. DOI: 10.1016/J.Bpj.2018.11.991 |
0.689 |
|
| 2019 |
Prigozhin MB, Zhang Y, Schulten KJ, Gruebele M, Pogorelov TV. Fast Pressure Jump Reveals Site-Specific Protein Dehydration-Folding Dynamics Biophysical Journal. 116: 38a. DOI: 10.1016/J.Bpj.2018.11.248 |
0.803 |
|
| 2018 |
Davis CM, Zanetti-Polzi L, Gruebele M, Amadei A, Dyer RB, Daidone I. A quantitative connection of experimental and simulated folding landscapes by vibrational spectroscopy. Chemical Science. 9: 9002-9011. PMID 30647892 DOI: 10.1039/C8Sc03786H |
0.773 |
|
| 2018 |
Wang Y, Sukenik S, Davis CM, Gruebele M. Cell Volume Controls Protein Stability and Compactness of the Unfolded State. The Journal of Physical Chemistry. B. PMID 30289261 DOI: 10.1021/acs.jpcb.8b08216 |
0.691 |
|
| 2018 |
Kisley L, Serrano KA, Davis CM, Guin D, Murphy E, Gruebele M, Leckband DE. Soluble Zwitterionic Poly(sulfobetaine) Destabilizes Proteins. Biomacromolecules. PMID 30064224 DOI: 10.1021/Acs.Biomac.8B01120 |
0.819 |
|
| 2018 |
Sukenik S, Salam M, Wang Y, Gruebele M. In-cell titration of small solutes controls protein stability and aggregation. Journal of the American Chemical Society. PMID 30044620 DOI: 10.1021/Jacs.8B04809 |
0.374 |
|
| 2018 |
Davis CM, Gruebele M. Non-steric interactions predict the trend and steric interactions the offset of protein stability in cells. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. PMID 29877016 DOI: 10.1002/cphc.201800534 |
0.689 |
|
| 2018 |
Nguyen HA, Banerjee P, Nguyen D, Lyding JW, Gruebele M, Jain PK. STM Imaging of Localized Surface Plasmons on Individual Gold Nanoislands. The Journal of Physical Chemistry Letters. PMID 29609463 DOI: 10.1021/Acs.Jpclett.8B00502 |
0.533 |
|
| 2018 |
Davis CM, Gruebele M. Labeling for quantitative comparison of imaging measurements in vitro and in cells. Biochemistry. PMID 29546761 DOI: 10.1021/Acs.Biochem.8B00141 |
0.678 |
|
| 2018 |
Chen T, Dave K, Gruebele M. Pressure- and heat-induced protein unfolding in bacterial cells: crowding vs. sticking. Febs Letters. PMID 29520756 DOI: 10.1002/1873-3468.13025 |
0.794 |
|
| 2018 |
Nguyen D, Goings JJ, Nguyen HA, Lyding J, Li X, Gruebele M. Orientation-dependent imaging of electronically excited quantum dots. The Journal of Chemical Physics. 148: 064701. PMID 29448801 DOI: 10.1063/1.5012784 |
0.547 |
|
| 2018 |
Boob MM, Sukenik S, Pogorelov TV, Gruebele M. The Role of TMAO in Protein Folding: A Joint Experimental and Simulation Study Biophysical Journal. 114: 51a. DOI: 10.1016/J.Bpj.2017.11.332 |
0.697 |
|
| 2017 |
Wieghold S, Nienhaus L, Knoller FL, Schweinberger FF, Shepherd JJ, Lyding JW, Heiz U, Gruebele M, Esch F. Plasmonic support-mediated activation of 1 nm platinum clusters for catalysis. Physical Chemistry Chemical Physics : Pccp. PMID 29115312 DOI: 10.1039/C7Cp04882C |
0.713 |
|
| 2017 |
Davis CM, Gruebele M, Sukenik S. How does solvation in the cell affect protein folding and binding? Current Opinion in Structural Biology. 48: 23-29. PMID 29035742 DOI: 10.1016/J.Sbi.2017.09.003 |
0.709 |
|
| 2017 |
Zanetti-Polzi L, Davis CM, Gruebele M, Dyer RB, Amadei A, Daidone I. Parallel folding pathways of Fip35 WW domain explained by infrared spectra and their computer simulation. Febs Letters. PMID 28881468 DOI: 10.1002/1873-3468.12836 |
0.752 |
|
| 2017 |
Ghaemi Z, Guzman I, Gnutt D, Luthey-Schulten Z, Gruebele M. Role of Electrostatics in Protein-RNA Binding: The Global vs. the Local Energy Landscape. The Journal of Physical Chemistry. B. PMID 28806086 DOI: 10.1021/Acs.Jpcb.7B04318 |
0.32 |
|
| 2017 |
Chao SH, Schaefer J, Gruebele M. The Surface of Protein λ6-85 Can Act as a Template for Recurring PEG Structure. Biochemistry. PMID 28714684 DOI: 10.1021/Acs.Biochem.7B00215 |
0.827 |
|
| 2017 |
Sukenik S, Ren P, Gruebele M. Weak protein-protein interactions in live cells are quantified by cell-volume modulation. Proceedings of the National Academy of Sciences of the United States of America. PMID 28607089 DOI: 10.1073/Pnas.1700818114 |
0.353 |
|
| 2017 |
Kisley L, Serrano KA, Guin D, Kong X, Gruebele M, Leckband DE. Direct Imaging of Protein Stability and Folding Kinetics in Hydrogels. Acs Applied Materials & Interfaces. PMID 28553706 DOI: 10.1021/Acsami.7B01371 |
0.801 |
|
| 2017 |
Nguyen DA, Nguyen HA, Lyding JW, Gruebele M. Imaging and Manipulating Energy Transfer Among Quantum Dots at Individual Dot Resolution. Acs Nano. PMID 28525955 DOI: 10.1021/Acsnano.7B02649 |
0.516 |
|
| 2017 |
Wieghold S, Nienhaus L, Siebel A, Krause M, Wand P, Gruebele M, Heiz U, Esch F. Au(111)-supported Platinum Nanoparticles: Ripening and Activity Mrs Advances. 2: 439-444. DOI: 10.1557/Adv.2017.75 |
0.626 |
|
| 2017 |
Berrios E, Gruebele M, Wolynes PG. Quantum controlled fusion Chemical Physics Letters. 683: 216-221. DOI: 10.1016/J.Cplett.2017.02.045 |
0.776 |
|
| 2017 |
Sukenik S, Gruebele M. Probing Protein Folding and Interaction in Live Cells using Osmotic Perturbations Biophysical Journal. 112. DOI: 10.1016/J.Bpj.2016.11.319 |
0.417 |
|
| 2017 |
Davis C, Guzman I, Gnutt D, Gruebele M. Spliceosomal U1A Protein-SL2 RNA Binding Affinity Decreases in Cells Biophysical Journal. 112: 314. DOI: 10.1016/J.Bpj.2016.11.1703 |
0.691 |
|
| 2017 |
Perlova T, Gruebele M, Chemla YR. Energy Taxis in Escherichia Coli on the Single-Cell Level Biophysical Journal. 112: 277a. DOI: 10.1016/J.Bpj.2016.11.1502 |
0.774 |
|
| 2016 |
Kachlishvili K, Dave K, Gruebele M, Scheraga HA, Maisuradze GG. Eliminating a Protein Folding Intermediate by Tuning a Local Hydrophobic Contact. The Journal of Physical Chemistry. B. PMID 27584585 DOI: 10.1021/Acs.Jpcb.6B07250 |
0.827 |
|
| 2016 |
Ghaemi Z, Guzman I, Baek JJ, Gruebele M, Luthey-Schulten Z. Estimation of Relative Protein-RNA Binding Strengths from Fluctuations in the Bound State. Journal of Chemical Theory and Computation. PMID 27529183 DOI: 10.1021/Acs.Jctc.6B00418 |
0.344 |
|
| 2016 |
Gruebele M, Dave K, Sukenik S. Globular Protein Folding In Vitro and In Vivo. Annual Review of Biophysics. 45: 233-51. PMID 27391927 DOI: 10.1146/Annurev-Biophys-062215-011236 |
0.819 |
|
| 2016 |
Nguyen D, Zhu ZG, Pringle B, Lyding J, Wang WH, Gruebele M. Composition-dependent metallic glass alloys correlate atomic mobility with collective glass surface dynamics. Physical Chemistry Chemical Physics : Pccp. PMID 27283239 DOI: 10.1039/C6Cp02654K |
0.537 |
|
| 2016 |
Tai J, Dave K, Hahn V, Guzman I, Gruebele M. Sub-cellular modulation of protein VlsE stability and folding kinetics. Febs Letters. PMID 27129718 DOI: 10.1002/1873-3468.12193 |
0.82 |
|
| 2016 |
Zhang Y, Schulten K, Gruebele M, Bansal PS, Wilson D, Daly NL. Disulfide Bridges: Bringing Together Frustrated Structure in a Bioactive Peptide. Biophysical Journal. 110: 1744-1752. PMID 27119635 DOI: 10.1016/J.Bpj.2016.03.027 |
0.536 |
|
| 2016 |
Sukenik S, Pogorelov TV, Gruebele M. Can Local Probes Go Global? A Joint Experiment-Simulation Analysis of λ6-85 Folding. The Journal of Physical Chemistry Letters. PMID 27101436 DOI: 10.1021/Acs.Jpclett.6B00582 |
0.718 |
|
| 2016 |
Davtyan A, Platkov M, Gruebele M, Papoian GA. Stochastic Resonance in Protein Folding Dynamics. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. PMID 26992148 DOI: 10.1002/Cphc.201501125 |
0.441 |
|
| 2016 |
Gelman H, Wirth AJ, Gruebele M. ReAsH as a quantitative probe of in-cell protein dynamics. Biochemistry. PMID 26959408 DOI: 10.1021/Acs.Biochem.5B01336 |
0.819 |
|
| 2016 |
Guin D, Sye K, Dave K, Gruebele M. Dodine as a transparent protein denaturant for circular dichroism and infrared studies. Protein Science : a Publication of the Protein Society. PMID 26941080 DOI: 10.1002/Pro.2914 |
0.817 |
|
| 2016 |
Dave K, Gelman H, Chu HT, Guin D, Gruebele M. The Effect of Fluorescent Protein Tags on Phosphoglycerate Kinase Stability Is Non-Additive. The Journal of Physical Chemistry. B. PMID 26923443 DOI: 10.1021/Acs.Jpcb.5B11915 |
0.819 |
|
| 2016 |
Dave K, Jäger M, Nguyen H, Kelly JW, Gruebele M. High-resolution mapping of the folding transition state of a WW domain. Journal of Molecular Biology. PMID 26880334 DOI: 10.1016/J.Jmb.2016.02.008 |
0.818 |
|
| 2016 |
Koepke JC, Wood JD, Chen Y, Schmucker SW, Liu X, Chang NN, Nienhaus L, Do JW, Carrion EA, Hewaparakrama J, Rangarajan A, Datye I, Mehta R, Haasch RT, Gruebele M, et al. Role of Pressure in the Growth of Hexagonal Boron Nitride Thin Films from Ammonia-Borane Chemistry of Materials. 28: 4169-4179. DOI: 10.1021/Acs.Chemmater.6B00396 |
0.706 |
|
| 2016 |
Davis CM, Guzman I, Gruebele M. Towards Three-Color Live-Cell Imaging of Spliceosome Assembly Biophysical Journal. 110: 3-7. DOI: 10.1016/J.Bpj.2015.11.2092 |
0.7 |
|
| 2015 |
Gruebele M, Dave K, Davtyan A, Papoian GA, Platkov M. Environmental fluctuations and stochastic resonance in protein folding. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. PMID 26711088 DOI: 10.1002/Cphc.201501041 |
0.802 |
|
| 2015 |
Nienhaus L, Goings JJ, Nguyen D, Wieghold S, Lyding JW, Li X, Gruebele M. Imaging Excited Orbitals of Quantum Dots: Experiment and Electronic Structure Theory. Journal of the American Chemical Society. PMID 26518039 DOI: 10.1021/Jacs.5B09272 |
0.737 |
|
| 2015 |
Nienhaus L, Wieghold S, Nguyen D, Lyding JW, Scott GE, Gruebele M. Optoelectronic Switching of a Carbon Nanotube Chiral Junction Imaged with Nanometer Spatial Resolution. Acs Nano. PMID 26348682 DOI: 10.1021/Acsnano.5B04872 |
0.77 |
|
| 2015 |
Dave K, Gruebele M. Fast-folding proteins under stress. Cellular and Molecular Life Sciences : Cmls. 72: 4273-85. PMID 26231095 DOI: 10.1007/S00018-015-2002-3 |
0.816 |
|
| 2015 |
Girdhar K, Gruebele M, Chemla YR. The Behavioral Space of Zebrafish Locomotion and Its Neural Network Analog. Plos One. 10: e0128668. PMID 26132396 DOI: 10.1371/Journal.Pone.0128668 |
0.661 |
|
| 2015 |
Nguyen D, Nienhaus L, Haasch RT, Lyding J, Gruebele M. Sub-nanometer glass surface dynamics induced by illumination. The Journal of Chemical Physics. 142: 234505. PMID 26093566 DOI: 10.1063/1.4922695 |
0.735 |
|
| 2015 |
Prigozhin MB, Chao SH, Sukenik S, Pogorelov TV, Gruebele M. Mapping fast protein folding with multiple-site fluorescent probes. Proceedings of the National Academy of Sciences of the United States of America. 112: 7966-71. PMID 26080403 DOI: 10.1073/Pnas.1422683112 |
0.823 |
|
| 2015 |
Wirth AJ, Liu Y, Prigozhin MB, Schulten K, Gruebele M. Comparing Fast Pressure Jump and Temperature Jump Protein Folding Experiments and Simulations. Journal of the American Chemical Society. 137: 7152-9. PMID 25988868 DOI: 10.1021/Jacs.5B02474 |
0.812 |
|
| 2015 |
Guzman I, Ghaemi Z, Baranger A, Luthey-Schulten Z, Gruebele M. Native conformational dynamics of the spliceosomal U1A protein. The Journal of Physical Chemistry. B. 119: 3651-61. PMID 25659967 DOI: 10.1021/Jp511760M |
0.443 |
|
| 2015 |
Pogorelov TV, Prigozhin MB, Chao S, Gruebele M. Mapping the Mechanism of Fast Protein Folding with Multiple Probes Biophysical Journal. 108: 347a-348a. DOI: 10.1016/J.Bpj.2014.11.1903 |
0.828 |
|
| 2015 |
Ghaemi Z, Guzman I, Gruebele M, Luthey-Schulten Z. Electrostatic Interaction Effects on the Binding of Spliceosomal U1A Protein-SL2 RNA Hairpin Biophysical Journal. 108: 15a. DOI: 10.1016/J.Bpj.2014.11.106 |
0.34 |
|
| 2014 |
Shyshlov D, Berrios E, Gruebele M, Babikov D. On readout of vibrational qubits using quantum beats. The Journal of Chemical Physics. 141: 224306. PMID 25494748 DOI: 10.1063/1.4903055 |
0.778 |
|
| 2014 |
Guo M, Gelman H, Gruebele M. Coupled protein diffusion and folding in the cell. Plos One. 9: e113040. PMID 25436502 DOI: 10.1371/Journal.Pone.0113040 |
0.79 |
|
| 2014 |
Nguyen D, Mallek J, Cloud AN, Abelson JR, Girolami GS, Lyding J, Gruebele M. The energy landscape of glassy dynamics on the amorphous hafnium diboride surface. The Journal of Chemical Physics. 141: 204501. PMID 25429948 DOI: 10.1063/1.4901132 |
0.588 |
|
| 2014 |
Platkov M, Gruebele M. Periodic and stochastic thermal modulation of protein folding kinetics. The Journal of Chemical Physics. 141: 035103. PMID 25053342 DOI: 10.1063/1.4887360 |
0.398 |
|
| 2014 |
Guzman I, Gruebele M. Protein folding dynamics in the cell. The Journal of Physical Chemistry. B. 118: 8459-70. PMID 24878167 DOI: 10.1021/Jp501866V |
0.42 |
|
| 2014 |
Chao SH, Matthews SS, Paxman R, Aksimentiev A, Gruebele M, Price JL. Two structural scenarios for protein stabilization by PEG. The Journal of Physical Chemistry. B. 118: 8388-95. PMID 24821319 DOI: 10.1021/Jp502234S |
0.82 |
|
| 2014 |
Gelman H, Gruebele M. Fast protein folding kinetics. Quarterly Reviews of Biophysics. 47: 95-142. PMID 24641816 DOI: 10.1017/S003358351400002X |
0.771 |
|
| 2014 |
Goodman JS, Chao SH, Pogorelov TV, Gruebele M. Filling up the heme pocket stabilizes apomyoglobin and speeds up its folding. The Journal of Physical Chemistry. B. 118: 6511-8. PMID 24456280 DOI: 10.1021/Jp412459Z |
0.827 |
|
| 2014 |
Liu Y, Prigozhin MB, Schulten K, Gruebele M. Observation of complete pressure-jump protein refolding in molecular dynamics simulation and experiment. Journal of the American Chemical Society. 136: 4265-72. PMID 24437525 DOI: 10.1021/Ja412639U |
0.823 |
|
| 2014 |
Guzman I, Gelman H, Tai J, Gruebele M. The extracellular protein VlsE is destabilized inside cells. Journal of Molecular Biology. 426: 11-20. PMID 24013077 DOI: 10.1016/J.Jmb.2013.08.024 |
0.768 |
|
| 2014 |
Nienhaus L, Scott GE, Haasch RT, Wieghold S, Lyding JW, Gruebele M. Transparent metal films for detection of single-molecule optical absorption by scanning tunneling microscopy Journal of Physical Chemistry C. 118: 13196-13202. DOI: 10.1021/Jp501811Z |
0.774 |
|
| 2014 |
Nienhaus L, Gross DE, Xue Z, Moore JS, Gruebele M. Intramolecular energy transfer in a synthetic dendron-based light harvesting system Journal of Photochemistry and Photobiology a: Chemistry. 295: 26-33. DOI: 10.1016/J.Jphotochem.2014.08.014 |
0.668 |
|
| 2014 |
Chao S, Price J, Aksimentiev A, Gruebele M. How Pegylation Stabilizes a Protein Biophysical Journal. 106: 667a. DOI: 10.1016/J.Bpj.2013.11.3693 |
0.829 |
|
| 2014 |
Prigozhin MB, Kapoor S, Winter R, Gruebele M. Minima and Barriers on the Pressure-Temperature Free Energy Landscape of Phosphoglycerate Kinase Biophysical Journal. 106: 259a-260a. DOI: 10.1016/J.Bpj.2013.11.1523 |
0.742 |
|
| 2013 |
Boulos SP, Prigozhin MB, Liu Y, Wirth AJ, Boppart SA, Gruebele M, Murphy CJ. The Gold Nanorod-Biology Interface: From Proteins to Cells to Tissue. Current Physical Chemistry. 3. PMID 24358071 DOI: 10.2174/1877946811303020002 |
0.793 |
|
| 2013 |
Wirth AJ, Platkov M, Gruebele M. Temporal variation of a protein folding energy landscape in the cell. Journal of the American Chemical Society. 135: 19215-21. PMID 24304346 DOI: 10.1021/Ja4087165 |
0.806 |
|
| 2013 |
Berrios E, Pratt S, Tripathi P, Gruebele M. More protected vibrational states at the dissociation limit of SCCl2. The Journal of Physical Chemistry. A. 117: 12082-90. PMID 24033374 DOI: 10.1021/Jp404834Y |
0.791 |
|
| 2013 |
Wirth AJ, Gruebele M. Quinary protein structure and the consequences of crowding in living cells: leaving the test-tube behind. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 35: 984-93. PMID 23943406 DOI: 10.1002/Bies.201300080 |
0.811 |
|
| 2013 |
Gelman H, Perlova T, Gruebele M. Dodine as a protein denaturant: the best of two worlds? The Journal of Physical Chemistry. B. 117: 13090-7. PMID 23906507 DOI: 10.1021/Jp4028113 |
0.822 |
|
| 2013 |
Prigozhin MB, Liu Y, Wirth AJ, Kapoor S, Winter R, Schulten K, Gruebele M. Misplaced helix slows down ultrafast pressure-jump protein folding. Proceedings of the National Academy of Sciences of the United States of America. 110: 8087-92. PMID 23620522 DOI: 10.1073/Pnas.1219163110 |
0.814 |
|
| 2013 |
Berrios E, Sundaradevan P, Gruebele M. Franck-Condon fingerprinting of vibration-tunneling spectra. The Journal of Physical Chemistry. A. 117: 7535-41. PMID 23586664 DOI: 10.1021/Jp401848P |
0.779 |
|
| 2013 |
Matsumura Y, Shinjo M, Kim SJ, Okishio N, Gruebele M, Kihara H. Transient helical structure during PI3K and Fyn SH3 domain folding. The Journal of Physical Chemistry. B. 117: 4836-43. PMID 23537292 DOI: 10.1021/Jp400167S |
0.722 |
|
| 2013 |
Prigozhin MB, Gruebele M. Microsecond folding experiments and simulations: a match is made. Physical Chemistry Chemical Physics : Pccp. 15: 3372-88. PMID 23361200 DOI: 10.1039/C3Cp43992E |
0.746 |
|
| 2013 |
Meister K, Ebbinghaus S, Xu Y, Duman JG, DeVries A, Gruebele M, Leitner DM, Havenith M. Long-range protein-water dynamics in hyperactive insect antifreeze proteins. Proceedings of the National Academy of Sciences of the United States of America. 110: 1617-22. PMID 23277543 DOI: 10.1073/Pnas.1214911110 |
0.409 |
|
| 2013 |
Matsumura Y, Shinjo M, Kim SJ, Okishio N, Gruebele M, Kihara H. Correction to “Transient Helical Structure during PI3K and Fyn SH3 Domain Folding” The Journal of Physical Chemistry B. 117: 15233-15233. DOI: 10.1021/Jp411258T |
0.654 |
|
| 2013 |
Wirth AJ, Gruebele M. Protein Folding across the Cell Cycle Biophysical Journal. 104: 573a. DOI: 10.1016/J.Bpj.2012.11.3182 |
0.798 |
|
| 2013 |
Sanchez IG, Gruebele M. Overcoming the Cellular Crowding Effect: VlsE-FRET is Destabilized Inside Cells Biophysical Journal. 104: 5-5. DOI: 10.1016/J.Bpj.2012.11.3135 |
0.342 |
|
| 2013 |
Perlova T, Gelman H, Gruebele M. New Powerful Protein Denaturant Biophysical Journal. 104: 563a. DOI: 10.1016/J.Bpj.2012.11.3122 |
0.818 |
|
| 2013 |
Gelman H, Gruebele M. Early Events of the Heat Shock Response Biophysical Journal. 104: 553a. DOI: 10.1016/J.Bpj.2012.11.3067 |
0.757 |
|
| 2013 |
Liu Y, Gruebele M, Schulten K. Fast Protein Refolding Observed in Pressure-Jump Molecular Dynamics Simulation Biophysical Journal. 104: 397a-398a. DOI: 10.1016/J.Bpj.2012.11.2217 |
0.609 |
|
| 2013 |
Prigozhin MB, Liu Y, Wirth AJ, Kapoor S, Winter R, Schulten K, Gruebele M. Protein Folding Studied by Very Fast Pressure Drops Biophysical Journal. 104: 188a. DOI: 10.1016/J.Bpj.2012.11.1063 |
0.824 |
|
| 2012 |
Denos S, Dhar A, Gruebele M. Crowding effects on the small, fast-folding protein lambda6-85. Faraday Discussions. 157: 451-62; discussion 4. PMID 23230782 DOI: 10.1039/C2Fd20009K |
0.827 |
|
| 2012 |
Ashtekar S, Lyding J, Gruebele M. Temperature-dependent two-state dynamics of individual cooperatively rearranging regions on a glass surface. Physical Review Letters. 109: 166103. PMID 23215096 DOI: 10.1103/Physrevlett.109.166103 |
0.791 |
|
| 2012 |
Ashtekar S, Nguyen D, Zhao K, Lyding J, Wang WH, Gruebele M. Communication: An obligatory glass surface. The Journal of Chemical Physics. 137: 141102. PMID 23061832 DOI: 10.1063/1.4757975 |
0.783 |
|
| 2012 |
Ebbinghaus S, Meister K, Prigozhin MB, Devries AL, Havenith M, Dzubiella J, Gruebele M. Functional importance of short-range binding and long-range solvent interactions in helical antifreeze peptides. Biophysical Journal. 103: L20-2. PMID 22853917 DOI: 10.1016/J.Bpj.2012.06.013 |
0.737 |
|
| 2012 |
Berrios E, Gruebele M, Shyshlov D, Wang L, Babikov D. High fidelity quantum gates with vibrational qubits. The Journal of Physical Chemistry. A. 116: 11347-54. PMID 22803619 DOI: 10.1021/Jp3055729 |
0.775 |
|
| 2012 |
Dhar A, Prigozhin M, Gelman H, Gruebele M. Studying IDP stability and dynamics by fast relaxation imaging in living cells. Methods in Molecular Biology (Clifton, N.J.). 895: 101-11. PMID 22760315 DOI: 10.1007/978-1-61779-927-3_8 |
0.821 |
|
| 2012 |
Liu Y, Strümpfer J, Freddolino PL, Gruebele M, Schulten K. Structural Characterization of λ-Repressor Folding from All-Atom Molecular Dynamics Simulations. The Journal of Physical Chemistry Letters. 3: 1117-1123. PMID 22737279 DOI: 10.1021/Jz300017C |
0.638 |
|
| 2012 |
Guo M, Xu Y, Gruebele M. Temperature dependence of protein folding kinetics in living cells. Proceedings of the National Academy of Sciences of the United States of America. 109: 17863-7. PMID 22665776 DOI: 10.1073/Pnas.1201797109 |
0.639 |
|
| 2012 |
Gelman H, Platkov M, Gruebele M. Rapid perturbation of free-energy landscapes: from in vitro to in vivo. Chemistry (Weinheim An Der Bergstrasse, Germany). 18: 6420-7. PMID 22517586 DOI: 10.1002/Chem.201104047 |
0.736 |
|
| 2012 |
Price JL, Shental-Bechor D, Dhar A, Turner MJ, Powers ET, Gruebele M, Levy Y, Kelly JW. Correction to Context-Dependent Effects of Asparagine Glycosylation on Pin WW Folding Kinetics and Thermodynamics. Journal of the American Chemical Society. 134: 4450-4451. PMID 22500055 DOI: 10.1021/Ja300899D |
0.582 |
|
| 2012 |
Wood JD, Schmucker SW, Haasch RT, Doidge GP, Nienhaus L, Damhorst GL, Lyons AS, Gruebele M, Bashir R, Pop E, Lyding JW. Improved graphene growth and fluorination on Cu with clean transfer to surfaces Proceedings of the Ieee Conference On Nanotechnology. DOI: 10.1109/NANO.2012.6322101 |
0.672 |
|
| 2012 |
Anunciado D, Guzman I, Dhar A, Gruebele M, Baranger AM. Corrigendum to “Multistep Kinetics of the U1A–SL2 RNA Complex Dissociation” [J. Mol. Biol. 408 (2011) 896–908] Journal of Molecular Biology. 422: 159-160. DOI: 10.1016/J.Jmb.2012.06.027 |
0.483 |
|
| 2012 |
Guo M, Gruebele M. Temperature Dependence of Protein Folding in Live Cell Biophysical Journal. 102: 56a. DOI: 10.1016/J.Bpj.2011.11.335 |
0.666 |
|
| 2012 |
Liu Y, Strumpfer J, Freddolino PL, Gruebele M, Schulten K. Folding Thermodynamics and Kinetics of Lambda-Repressor from All-Atom Molecular Dynamics Simulations Biophysical Journal. 102: 4-7. DOI: 10.1016/J.Bpj.2011.11.2506 |
0.648 |
|
| 2011 |
Prigozhin MB, Gruebele M. The fast and the slow: folding and trapping of λ6-85. Journal of the American Chemical Society. 133: 19338-41. PMID 22066714 DOI: 10.1016/J.Bpj.2011.11.1195 |
0.764 |
|
| 2011 |
Dhar A, Gruebele M. Fast Relaxation Imaging in living cells. Current Protocols in Protein Science / Editorial Board, John E. Coligan ... [Et Al.]. Unit28.1. PMID 21842471 DOI: 10.1002/0471140864.Ps2801S65 |
0.585 |
|
| 2011 |
Ashtekar S, Scott G, Lyding J, Gruebele M. Direct imaging of two-state dynamics on the amorphous silicon surface. Physical Review Letters. 106: 235501. PMID 21770518 DOI: 10.1103/Physrevlett.106.235501 |
0.778 |
|
| 2011 |
Dhar A, Girdhar K, Singh D, Gelman H, Ebbinghaus S, Gruebele M. Protein stability and folding kinetics in the nucleus and endoplasmic reticulum of eucaryotic cells. Biophysical Journal. 101: 421-30. PMID 21767495 DOI: 10.1016/J.Bpj.2011.05.071 |
0.809 |
|
| 2011 |
Girdhar K, Scott G, Chemla YR, Gruebele M. Better biomolecule thermodynamics from kinetics. The Journal of Chemical Physics. 135: 015102. PMID 21744920 DOI: 10.1063/1.3607605 |
0.8 |
|
| 2011 |
Anunciado D, Dhar A, Gruebele M, Baranger AM. Multistep kinetics of the U1A-SL2 RNA complex dissociation. Journal of Molecular Biology. 408: 896-908. PMID 21419778 DOI: 10.1016/J.Jmb.2011.02.054 |
0.547 |
|
| 2011 |
Prigozhin MB, Sarkar K, Law D, Swope WC, Gruebele M, Pitera J. Reducing lambda repressor to the core. The Journal of Physical Chemistry. B. 115: 2090-6. PMID 21319829 DOI: 10.1021/Jp110175X |
0.825 |
|
| 2011 |
Culyba EK, Price JL, Hanson SR, Dhar A, Wong CH, Gruebele M, Powers ET, Kelly JW. Protein native-state stabilization by placing aromatic side chains in N-glycosylated reverse turns. Science (New York, N.Y.). 331: 571-5. PMID 21292975 DOI: 10.1126/Science.1198461 |
0.607 |
|
| 2011 |
Gruebele M. Two- and higher point correlation functions in proteins. Journal of Biomolecular Structure & Dynamics. 28: 615-6; discussion 66. PMID 21142234 DOI: 10.1080/073911011010524963 |
0.324 |
|
| 2011 |
Piana S, Sarkar K, Lindorff-Larsen K, Guo M, Gruebele M, Shaw DE. Computational design and experimental testing of the fastest-folding β-sheet protein. Journal of Molecular Biology. 405: 43-8. PMID 20974152 DOI: 10.1016/J.Jmb.2010.10.023 |
0.76 |
|
| 2011 |
Ebbinghaus S, Gruebele M. Protein folding landscapes in the living cell Journal of Physical Chemistry Letters. 2: 314-319. DOI: 10.1021/Jz101729Z |
0.438 |
|
| 2011 |
Walters PL, Prigozhin MB, Takeshita TY, Xu L, Olivarez FM, Gruebele M. Conformational energy gaps and scaling of conformer density in chain molecules Chemical Physics Letters. 507: 15-18. DOI: 10.1016/J.Cplett.2011.03.050 |
0.726 |
|
| 2011 |
Liu Y, Gruebele M, Schulten K. Temperature Dependence of the High-Pressure Denatured State of Lambda Repressor Biophysical Journal. 100: 28a. DOI: 10.1016/J.Bpj.2010.12.356 |
0.587 |
|
| 2011 |
Elmer M, Asta C, Butler K, Dhar A, Gruebele M, Guo L, Irving T, Marcus J, Rice S, Landahl E. SAXS Study of Cytochrome-C Cold Denaturation Biophysical Journal. 100: 542a. DOI: 10.1016/J.Bpj.2010.12.3161 |
0.6 |
|
| 2011 |
Gruebele M. Protein Folding in Living Cells Biophysical Journal. 100: 6a. DOI: 10.1016/J.Bpj.2010.12.239 |
0.414 |
|
| 2010 |
Chen K, Eargle J, Sarkar K, Gruebele M, Luthey-Schulten Z. Functional role of ribosomal signatures. Biophysical Journal. 99: 3930-40. PMID 21156135 DOI: 10.1016/J.Bpj.2010.09.062 |
0.618 |
|
| 2010 |
Gruebele M. Analytical biochemistry: Weighing up protein folding. Nature. 468: 640-1. PMID 21124444 DOI: 10.1038/468640A |
0.412 |
|
| 2010 |
Scott G, Ashtekar S, Lyding J, Gruebele M. Direct imaging of room temperature optical absorption with subnanometer spatial resolution. Nano Letters. 10: 4897-900. PMID 21058717 DOI: 10.1021/Nl102854S |
0.773 |
|
| 2010 |
Dhar A, Ebbinghaus S, Shen Z, Mishra T, Gruebele M. The diffusion coefficient for PGK folding in eukaryotic cells. Biophysical Journal. 99: L69-71. PMID 21044564 DOI: 10.1016/J.Bpj.2010.08.066 |
0.581 |
|
| 2010 |
Sarkar K, Nguyen DA, Gruebele M. Loop and stem dynamics during RNA hairpin folding and unfolding. Rna (New York, N.Y.). 16: 2427-34. PMID 20962040 DOI: 10.1261/Rna.2253310 |
0.619 |
|
| 2010 |
Price JL, Shental-Bechor D, Dhar A, Turner MJ, Powers ET, Gruebele M, Levy Y, Kelly JW. Context-dependent effects of asparagine glycosylation on Pin WW folding kinetics and thermodynamics. Journal of the American Chemical Society. 132: 15359-67. PMID 20936810 DOI: 10.1021/Ja106896T |
0.615 |
|
| 2010 |
Dhar A, Samiotakis A, Ebbinghaus S, Nienhaus L, Homouz D, Gruebele M, Cheung MS. Structure, function, and folding of phosphoglycerate kinase are strongly perturbed by macromolecular crowding. Proceedings of the National Academy of Sciences of the United States of America. 107: 17586-91. PMID 20921368 DOI: 10.1073/Pnas.1006760107 |
0.764 |
|
| 2010 |
Gruebele M. Protein folding. Methods (San Diego, Calif.). 52: 1-2. PMID 20816347 DOI: 10.1016/j.ymeth.2010.08.010 |
0.305 |
|
| 2010 |
Ebbinghaus S, Meister K, Born B, DeVries AL, Gruebele M, Havenith M. Antifreeze glycoprotein activity correlates with long-range protein-water dynamics. Journal of the American Chemical Society. 132: 12210-1. PMID 20712311 DOI: 10.1021/Ja1051632 |
0.335 |
|
| 2010 |
Scott G, Gruebele M. Solving the low dimensional Smoluchowski equation with a singular value basis set. Journal of Computational Chemistry. 31: 2428-33. PMID 20652986 DOI: 10.1002/Jcc.21535 |
0.586 |
|
| 2010 |
Larios E, Gruebele M. Protein stability at negative pressure. Methods (San Diego, Calif.). 52: 51-6. PMID 20433926 DOI: 10.1016/J.Ymeth.2010.04.010 |
0.71 |
|
| 2010 |
Liu F, Maynard C, Scott G, Melnykov A, Hall KB, Gruebele M. A natural missing link between activated and downhill protein folding scenarios. Physical Chemistry Chemical Physics : Pccp. 12: 3542-9. PMID 20336253 DOI: 10.1039/B925033F |
0.689 |
|
| 2010 |
Denos S, Gotkowski E, Gruebele M. A learning algorithm to discover soluble vesicle-binding helical peptides. The Journal of Physical Chemistry. B. 114: 4909-14. PMID 20232924 DOI: 10.1021/Jp912157G |
0.768 |
|
| 2010 |
Ebbinghaus S, Dhar A, McDonald JD, Gruebele M. Protein folding stability and dynamics imaged in a living cell. Nature Methods. 7: 319-23. PMID 20190760 DOI: 10.1038/Nmeth.1435 |
0.624 |
|
| 2010 |
Liu F, Gao YG, Gruebele M. A survey of lambda repressor fragments from two-state to downhill folding. Journal of Molecular Biology. 397: 789-98. PMID 20138892 DOI: 10.1016/J.Jmb.2010.01.071 |
0.485 |
|
| 2010 |
Liu F, Gruebele M. Mapping an aggregation nucleus one protein at a time Journal of Physical Chemistry Letters. 1: 16-19. DOI: 10.1021/Jz9000856 |
0.43 |
|
| 2010 |
Ashtekar S, Scott G, Lyding J, Gruebele M. Direct visualization of two-state dynamics on metallic glass surfaces well below T g Journal of Physical Chemistry Letters. 1: 1941-1945. DOI: 10.1021/Jz100633D |
0.788 |
|
| 2010 |
Berrios E, Hui HY, Gruebele M. Vibrationally resolved emission of thiophosgene dimer Chemical Physics Letters. 497: 163-167. DOI: 10.1016/J.Cplett.2010.08.014 |
0.781 |
|
| 2009 |
Liu F, Nakaema M, Gruebele M. The transition state transit time of WW domain folding is controlled by energy landscape roughness. The Journal of Chemical Physics. 131: 195101. PMID 19929078 DOI: 10.1063/1.3262489 |
0.472 |
|
| 2009 |
Gruebele M. How to mark off paths on the protein energy landscape. Proceedings of the National Academy of Sciences of the United States of America. 106: 18879-80. PMID 19889984 DOI: 10.1073/Pnas.0910764106 |
0.437 |
|
| 2009 |
Sarkar K, Meister K, Sethi A, Gruebele M. Fast folding of an RNA tetraloop on a rugged energy landscape detected by a stacking-sensitive probe. Biophysical Journal. 97: 1418-27. PMID 19720030 DOI: 10.1016/J.Bpj.2009.06.035 |
0.616 |
|
| 2009 |
Kim SJ, Matsumura Y, Dumont C, Kihara H, Gruebele M. Slowing down downhill folding: a three-probe study. Biophysical Journal. 97: 295-302. PMID 19580767 DOI: 10.1016/J.Bpj.2009.04.041 |
0.712 |
|
| 2009 |
Fuller AA, Du D, Liu F, Davoren JE, Bhabha G, Kroon G, Case DA, Dyson HJ, Powers ET, Wipf P, Gruebele M, Kelly JW. Evaluating beta-turn mimics as beta-sheet folding nucleators. Proceedings of the National Academy of Sciences of the United States of America. 106: 11067-72. PMID 19541614 DOI: 10.1073/Pnas.0813012106 |
0.35 |
|
| 2009 |
Dumont C, Emilsson T, Gruebele M. Reaching the protein folding speed limit with large, sub-microsecond pressure jumps. Nature Methods. 6: 515-9. PMID 19483692 DOI: 10.1038/Nmeth.1336 |
0.364 |
|
| 2009 |
Gruebele M. Protein dynamics: from molecules, to interactions, to biology. International Journal of Molecular Sciences. 10: 1360-8. PMID 19399253 DOI: 10.3390/Ijms10031360 |
0.408 |
|
| 2009 |
Chowdary PD, Gruebele M. An effective Hamiltonian survey of the anharmonic vibrational state space of SCCl2 up to the dissociation energy. The Journal of Chemical Physics. 130: 134310. PMID 19355735 DOI: 10.1063/1.3105989 |
0.304 |
|
| 2009 |
Weidinger D, Engel MF, Gruebele M. Freezing vibrational energy flow: a fitness function for interchangeable computational and experimental control. The Journal of Physical Chemistry. A. 113: 4184-91. PMID 19245213 DOI: 10.1021/Jp8106028 |
0.67 |
|
| 2009 |
Born B, Kim SJ, Ebbinghaus S, Gruebele M, Havenith M. The terahertz dance of water with the proteins: the effect of protein flexibility on the dynamical hydration shell of ubiquitin. Faraday Discussions. 141: 161-73; discussion 1. PMID 19227357 DOI: 10.1039/B804734K |
0.733 |
|
| 2009 |
Liu F, Dumont C, Zhu Y, DeGrado WF, Gai F, Gruebele M. A one-dimensional free energy surface does not account for two-probe folding kinetics of protein alpha(3)D. The Journal of Chemical Physics. 130: 061101. PMID 19222256 DOI: 10.1063/1.3077008 |
0.42 |
|
| 2009 |
Carmichael ES, Gruebele M. Controlling the smoothness of optically transparent gold films by temperature tuning Journal of Physical Chemistry C. 113: 4495-4501. DOI: 10.1021/Jp807907X |
0.768 |
|
| 2009 |
Freddolino PL, Liu F, Park S, Gruebele M, Schulten K. Microsecond Explicit Solvent Molecular Dynamics Simulations of Protein Folding Biophysical Journal. 96: 590a. DOI: 10.1016/J.Bpj.2008.12.3090 |
0.622 |
|
| 2008 |
Leitner DM, Gruebele M, Havenith M. Solvation dynamics of biomolecules: modeling and terahertz experiments. Hfsp Journal. 2: 314-23. PMID 19436490 DOI: 10.2976/1.2976661 |
0.354 |
|
| 2008 |
Jager M, Deechongkit S, Koepf EK, Nguyen H, Gao J, Powers ET, Gruebele M, Kelly JW. Understanding the mechanism of beta-sheet folding from a chemical and biological perspective. Biopolymers. 90: 751-8. PMID 18844292 DOI: 10.1002/Bip.21101 |
0.545 |
|
| 2008 |
Kim SJ, Born B, Havenith M, Gruebele M. Real-time detection of protein-water dynamics upon protein folding by terahertz absorption spectroscopy. Angewandte Chemie (International Ed. in English). 47: 6486-9. PMID 18663705 DOI: 10.1002/Anie.200802281 |
0.713 |
|
| 2008 |
Freddolino PL, Liu F, Gruebele M, Schulten K. Ten-microsecond molecular dynamics simulation of a fast-folding WW domain. Biophysical Journal. 94: L75-7. PMID 18339748 DOI: 10.1529/Biophysj.108.131565 |
0.585 |
|
| 2008 |
Kim SJ, Dumont C, Gruebele M. Simulation-based fitting of protein-protein interaction potentials to SAXS experiments. Biophysical Journal. 94: 4924-31. PMID 18326645 DOI: 10.1529/Biophysj.107.123240 |
0.696 |
|
| 2008 |
Liu F, Du D, Fuller AA, Davoren JE, Wipf P, Kelly JW, Gruebele M. An experimental survey of the transition between two-state and downhill protein folding scenarios. Proceedings of the National Academy of Sciences of the United States of America. 105: 2369-74. PMID 18268349 DOI: 10.1073/Pnas.0711908105 |
0.487 |
|
| 2008 |
Ebbinghaus S, Kim SJ, Heyden M, Yu X, Gruebele M, Leitner DM, Havenith M. Protein sequence- and pH-dependent hydration probed by terahertz spectroscopy. Journal of the American Chemical Society. 130: 2374-5. PMID 18247605 DOI: 10.1021/Ja0746520 |
0.719 |
|
| 2008 |
Gruebele M. Comment on Probe-dependent and nonexponential relaxation kinetics: unreliable signatures of downhill protein folding. Proteins. 70: 1099-102. PMID 18004780 DOI: 10.1002/Prot.21789 |
0.443 |
|
| 2008 |
Matsumura Y, Kim SJ, Li J, Shinto M, Jin X, Dumont C, Guo L, Gruebele M, Kihara H. 2P-096 Two transient intermediates appeared in the refolding process of Fyn SH3(The 46th Annual Meeting of the Biophysical Society of Japan) Seibutsu Butsuri. 48: S90. DOI: 10.2142/Biophys.48.S90_1 |
0.635 |
|
| 2008 |
Leitner DM, Gruebele M. A quantum model of restricted vibrational energy flow on the way to the transition state in unimolecular reactions Molecular Physics. 106: 433-442. DOI: 10.1080/00268970701854789 |
0.33 |
|
| 2008 |
Liu F, Gruebele M. Downhill dynamics and the molecular rate of protein folding Chemical Physics Letters. 461: 1-8. DOI: 10.1016/J.Cplett.2008.04.075 |
0.484 |
|
| 2008 |
Kim S, Born B, Havenith M, Gruebele M. Inside Cover: Real-Time Detection of Protein-Water Dynamics upon Protein Folding by Terahertz Absorption Spectroscopy (Angew. Chem. Int. Ed. 34/2008) Angewandte Chemie International Edition. 47: 6302-6302. DOI: 10.1002/Anie.200890166 |
0.722 |
|
| 2008 |
Kim S, Born B, Havenith M, Gruebele M. Innentitelbild: Echtzeitnachweis von Änderungen im Protein-Wassernetzwerk während der Proteinfaltung mit Terahertz-Absorptionsspektroskopie (Angew. Chem. 34/2008) Angewandte Chemie. 120: 6398-6398. DOI: 10.1002/Ange.200890220 |
0.715 |
|
| 2008 |
Kim S, Born B, Havenith M, Gruebele M. Echtzeitnachweis von Änderungen im Protein-Wassernetzwerk während der Proteinfaltung mit Terahertz-Absorptionsspektroskopie Angewandte Chemie. 120: 6586-6589. DOI: 10.1002/Ange.200802281 |
0.713 |
|
| 2007 |
Ebbinghaus S, Kim SJ, Heyden M, Yu X, Heugen U, Gruebele M, Leitner DM, Havenith M. An extended dynamical hydration shell around proteins. Proceedings of the National Academy of Sciences of the United States of America. 104: 20749-52. PMID 18093918 DOI: 10.1073/Pnas.0709207104 |
0.73 |
|
| 2007 |
Jäger M, Nguyen H, Dendle M, Gruebele M, Kelly JW. Influence of hPin1 WW N-terminal domain boundaries on function, protein stability, and folding. Protein Science : a Publication of the Protein Society. 16: 1495-501. PMID 17586778 DOI: 10.1110/Ps.072775507 |
0.545 |
|
| 2007 |
Liu F, Gruebele M. Tuning lambda6-85 towards downhill folding at its melting temperature. Journal of Molecular Biology. 370: 574-84. PMID 17532338 DOI: 10.1016/J.Jmb.2007.04.036 |
0.459 |
|
| 2007 |
Matsumura Y, Kim SJ, Li J, Shinjo M, Jin X, Dumont C, Guo L, Gruebele M, Kihara H. 2P083 Kinetic refolding of Fyn SH3(Proteins-stability, folding, and other physicochemical properties,Poster Presentations) Seibutsu Butsuri. 47: S133. DOI: 10.2142/Biophys.47.S133_4 |
0.713 |
|
| 2007 |
Carmichael ES, Ballard JB, Lyding JW, Gruebele M. Frequency-modulated, single-molecule absorption detected by scanning tunneling microscopy Journal of Physical Chemistry C. 111: 3314-3321. DOI: 10.1021/Jp067237N |
0.782 |
|
| 2007 |
Gruebele M, Lyding J, Carmichael E, Ballard J. Detecting single-molecule absorption Materials Today. 10: 48-49. DOI: 10.1016/S1369-7021(07)70132-3 |
0.765 |
|
| 2007 |
Chowdary PD, Strickler B, Lee S, Gruebele M. The over(X, ∼) ← over(A, ∼) SEP spectra of jet-cooled thiophosgene Chemical Physics Letters. 434: 182-187. DOI: 10.1016/J.Cplett.2006.12.011 |
0.785 |
|
| 2007 |
Engel M, Gruebele M. Shifted-update rotation wavepacket propagation with a laser pulse Chemical Physics Letters. 433: 368-372. DOI: 10.1016/J.Cplett.2006.11.016 |
0.664 |
|
| 2006 |
Dumont C, Matsumura Y, Kim SJ, Li J, Kondrashkina E, Kihara H, Gruebele M. Solvent-tuning the collapse and helix formation time scales of lambda(6-85)*. Protein Science : a Publication of the Protein Society. 15: 2596-604. PMID 17075136 DOI: 10.1110/Ps.062257406 |
0.71 |
|
| 2006 |
Jäger M, Zhang Y, Bieschke J, Nguyen H, Dendle M, Bowman ME, Noel JP, Gruebele M, Kelly JW. Structure-function-folding relationship in a WW domain. Proceedings of the National Academy of Sciences of the United States of America. 103: 10648-53. PMID 16807295 DOI: 10.1073/Pnas.0600511103 |
0.579 |
|
| 2006 |
Ma H, Proctor DJ, Kierzek E, Kierzek R, Bevilacqua PC, Gruebele M. Exploring the energy landscape of a small RNA hairpin. Journal of the American Chemical Society. 128: 1523-30. PMID 16448122 DOI: 10.1021/Ja0553856 |
0.663 |
|
| 2006 |
Deechongkit S, Nguyen H, Jager M, Powers ET, Gruebele M, Kelly JW. Beta-sheet folding mechanisms from perturbation energetics. Current Opinion in Structural Biology. 16: 94-101. PMID 16442278 DOI: 10.1016/J.Sbi.2006.01.014 |
0.545 |
|
| 2006 |
Yang WY, Gruebele M. Binary and ternary aggregation within tethered protein constructs. Biophysical Journal. 90: 2930-7. PMID 16428283 DOI: 10.1529/Biophysj.105.075846 |
0.399 |
|
| 2006 |
Sibert EL, Gruebele M. Molecular vibrational energy flow and dilution factors in an anharmonic state space. The Journal of Chemical Physics. 124: 024317. PMID 16422593 DOI: 10.1063/1.2155432 |
0.317 |
|
| 2006 |
Ballard JB, Carmichael ES, Shi D, Lyding JW, Gruebele M. Laser absorption scanning tunneling microscopy of carbon nanotubes. Nano Letters. 6: 45-9. PMID 16402785 DOI: 10.1021/Nl0519231 |
0.778 |
|
| 2006 |
Ma H, Gruebele M. Low barrier kinetics: dependence on observables and free energy surface. Journal of Computational Chemistry. 27: 125-34. PMID 16302178 DOI: 10.1002/Jcc.20311 |
0.675 |
|
| 2006 |
Dumont C, Matsumura Y, Kim SJ, Li J, Kondrashkina E, Kihara H, Gruebele M. 1P109 Solvent-tuning collapse and helix formation time scales of λ^*_6-85(3. Protein folding and misfolding (I),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006) Seibutsu Butsuri. 46: S174. DOI: 10.2142/Biophys.46.S174_1 |
0.696 |
|
| 2006 |
Leitner DM, Havenith M, Gruebele M. Biomolecule large-amplitude motion and solvation dynamics: Modelling and probes from THz to X-rays International Reviews in Physical Chemistry. 25: 553-582. DOI: 10.1080/01442350600862117 |
0.332 |
|
| 2006 |
Lee S, Engel M, Gruebele M. The state space model of vibrational energy flow: An experimental test using SEP spectra of jet-cooled thiophosgene Chemical Physics Letters. 420: 151-156. DOI: 10.1016/J.Cplett.2005.12.064 |
0.685 |
|
| 2006 |
Larios E, Pitera JW, Swope WC, Gruebele M. Correlation of early orientational ordering of engineered λ6-85 structure with kinetics and thermodynamics Chemical Physics. 323: 45-53. DOI: 10.1016/J.Chemphys.2005.08.048 |
0.745 |
|
| 2005 |
Nguyen H, Jäger M, Kelly JW, Gruebele M. Engineering a beta-sheet protein toward the folding speed limit. The Journal of Physical Chemistry. B. 109: 15182-6. PMID 16852923 DOI: 10.1021/Jp052373Y |
0.58 |
|
| 2005 |
Gruebele M. Downhill protein folding: evolution meets physics. Comptes Rendus Biologies. 328: 701-12. PMID 16125648 DOI: 10.1016/J.Crvi.2005.02.007 |
0.432 |
|
| 2005 |
Ma H, Gruebele M. Kinetics are probe-dependent during downhill folding of an engineered lambda6-85 protein. Proceedings of the National Academy of Sciences of the United States of America. 102: 2283-7. PMID 15699334 DOI: 10.1073/Pnas.0409270102 |
0.722 |
|
| 2005 |
Yang WY, Gruebele M. Kinetic equivalence of the heat and cold structural transitions of lambda6-85. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 363: 565-73. PMID 15664899 DOI: 10.1098/Rsta.2004.1508 |
0.484 |
|
| 2004 |
Proctor DJ, Ma H, Kierzek E, Kierzek R, Gruebele M, Bevilacqua PC. Folding thermodynamics and kinetics of YNMG RNA hairpins: specific incorporation of 8-bromoguanosine leads to stabilization by enhancement of the folding rate. Biochemistry. 43: 14004-14. PMID 15518549 DOI: 10.1021/Bi048213E |
0.687 |
|
| 2004 |
Yang WY, Gruebele M. Rate-temperature relationships in lambda-repressor fragment lambda 6-85 folding. Biochemistry. 43: 13018-25. PMID 15476395 DOI: 10.1021/Bi049113B |
0.43 |
|
| 2004 |
Yang WY, Gruebele M. Folding lambda-repressor at its speed limit. Biophysical Journal. 87: 596-608. PMID 15240492 DOI: 10.1529/Biophysj.103.039040 |
0.484 |
|
| 2004 |
Deechongkit S, Nguyen H, Powers ET, Dawson PE, Gruebele M, Kelly JW. Context-dependent contributions of backbone hydrogen bonding to beta-sheet folding energetics. Nature. 430: 101-5. PMID 15229605 DOI: 10.1038/Nature02611 |
0.553 |
|
| 2004 |
Yang WY, Gruebele M. Detection-dependent kinetics as a probe of folding landscape microstructure. Journal of the American Chemical Society. 126: 7758-9. PMID 15212506 DOI: 10.1021/Ja0493751 |
0.454 |
|
| 2004 |
Larios E, Li JS, Schulten K, Kihara H, Gruebele M. Multiple probes reveal a native-like intermediate during low-temperature refolding of ubiquitin. Journal of Molecular Biology. 340: 115-25. PMID 15184026 DOI: 10.1016/J.Jmb.2004.04.048 |
0.775 |
|
| 2004 |
Yang WY, Pitera JW, Swope WC, Gruebele M. Heterogeneous folding of the trpzip hairpin: full atom simulation and experiment. Journal of Molecular Biology. 336: 241-51. PMID 14741219 DOI: 10.1016/J.Jmb.2003.11.033 |
0.485 |
|
| 2004 |
Gruebele M. Quantum dynamics and control of vibrational dephasing Journal of Physics Condensed Matter. 16: R1057-R1088. DOI: 10.1088/0953-8984/16/30/R02 |
0.312 |
|
| 2004 |
Ma H, Ervin J, Gruebele M. Single-sweep detection of relaxation kinetics by submicrosecond midinfrared spectroscopy Review of Scientific Instruments. 75: 486-491. DOI: 10.1063/1.1637437 |
0.794 |
|
| 2004 |
Strickler B, Gruebele M. Vibrational dynamics of SCCl2 from the zero point to the first dissociation limit Physical Chemistry Chemical Physics. 6: 3786-3800. DOI: 10.1039/B403114H |
0.792 |
|
| 2004 |
Larios E, Yang WY, Schulten K, Gruebele M. A similarity measure for partially folded proteins: Application to unfolded and native-like conformational fluctuations Chemical Physics. 307: 217-225. DOI: 10.1016/J.Chemphys.2004.06.042 |
0.77 |
|
| 2004 |
Ballard J, Shi D, Carmichael E, Pappu S, Lyding J, Gruebele M. Scanning tunneling microscopy using dynamic laser heating 2004 4th Ieee Conference On Nanotechnology. 68-70. |
0.772 |
|
| 2004 |
Havenith M, Heugen U, Bergner A, Ebbinghaus S, Bründermann E, Larios E, Leitner DM, Gruebele M. THz-biology: Studying protein dynamics in solution Conference Digest of the 2004 Joint 29th International Conference On Infrared and Millimeter Waves and 12th International Conference On Terahertz Electronics. 731-732. |
0.68 |
|
| 2003 |
Yang WY, Larios E, Gruebele M. On the extended beta-conformation propensity of polypeptides at high temperature. Journal of the American Chemical Society. 125: 16220-7. PMID 14692763 DOI: 10.1021/Ja0360081 |
0.734 |
|
| 2003 |
Osváth S, Sabelko JJ, Gruebele M. Tuning the heterogeneous early folding dynamics of phosphoglycerate kinase. Journal of Molecular Biology. 333: 187-99. PMID 14516752 DOI: 10.1016/J.Jmb.2003.08.011 |
0.81 |
|
| 2003 |
Osváth S, Gruebele M. Proline can have opposite effects on fast and slow protein folding phases. Biophysical Journal. 85: 1215-22. PMID 12885665 DOI: 10.1016/S0006-3495(03)74557-3 |
0.399 |
|
| 2003 |
Yang WY, Gruebele M. Folding at the speed limit. Nature. 423: 193-7. PMID 12736690 DOI: 10.1038/Nature01609 |
0.521 |
|
| 2003 |
Nguyen H, Jager M, Moretto A, Gruebele M, Kelly JW. Tuning the free-energy landscape of a WW domain by temperature, mutation, and truncation. Proceedings of the National Academy of Sciences of the United States of America. 100: 3948-53. PMID 12651955 DOI: 10.1073/Pnas.0538054100 |
0.597 |
|
| 2003 |
Marks DL, Bredfeldt J, Hambir S, Dlott D, Kitchell B, Gruebele M, Boppart SA. Molecular species sensitive optical coherence tomography using coherent anti-stokes Raman scattering spectroscopy Proceedings of Spie - the International Society For Optical Engineering. 4956: 9-13. DOI: 10.1117/12.477787 |
0.511 |
|
| 2003 |
Strickler B, Nemes L, Gruebele M. The CH stretching first overtone triad of ketene Journal of Molecular Spectroscopy. 219: 335-341. DOI: 10.1016/S0022-2852(03)00092-4 |
0.758 |
|
| 2003 |
Gruebele M. Mechanism and control of molecular energy flow: A modeling perspective Theoretical Chemistry Accounts. 109: 53-63. DOI: 10.1007/S00214-002-0394-2 |
0.306 |
|
| 2002 |
Ervin J, Gruebele M. Quantifying protein folding transition States with φ(t). Journal of Biological Physics. 28: 115-28. PMID 23345761 DOI: 10.1023/A:1019930203777 |
0.751 |
|
| 2002 |
Pandit A, Ma H, Van Stokkum IH, Gruebele M, Van Grondelle R. Time-resolved dissociation of the light-harvesting 1 complex of Rhodospirillum rubrum, studied by infrared laser temperature jump. Biochemistry. 41: 15115-20. PMID 12484747 DOI: 10.1021/Bi0269005 |
0.65 |
|
| 2002 |
Snow CD, Nguyen H, Pande VS, Gruebele M. Absolute comparison of simulated and experimental protein-folding dynamics. Nature. 420: 102-6. PMID 12422224 DOI: 10.1038/Nature01160 |
0.629 |
|
| 2002 |
Ervin J, Larios E, Osváth S, Schulten K, Gruebele M. What causes hyperfluorescence: folding intermediates or conformationally flexible native states? Biophysical Journal. 83: 473-83. PMID 12080134 DOI: 10.1016/S0006-3495(02)75183-7 |
0.825 |
|
| 2002 |
Gruebele M. Protein folding: the free energy surface. Current Opinion in Structural Biology. 12: 161-8. PMID 11959492 DOI: 10.1016/S0959-440X(02)00304-4 |
0.399 |
|
| 2002 |
Gruebele M. An intermediate seeks instant gratification. Nature Structural Biology. 9: 154-5. PMID 11875509 DOI: 10.1038/Nsb0302-154 |
0.435 |
|
| 2002 |
Qin Z, Ervin J, Larios E, Gruebele M, Kihara H. Formation of a compact structured ensemble without fluorescence signature early during ubiquitin folding Journal of Physical Chemistry B. 106: 13040-13046. DOI: 10.1021/Jp021433M |
0.818 |
|
| 2002 |
Wong V, Gruebele M. Sub-exponential spin-boson decoherence in a finite bath Chemical Physics. 284: 29-44. DOI: 10.1016/S0301-0104(02)00534-7 |
0.518 |
|
| 2002 |
Bigwood RM, Gruebele M. Freezing molecular vibrational energy flow with coherent control Journal of Molecular Structure: Theochem. 589: 447-457. DOI: 10.1016/S0166-1280(02)00303-2 |
0.31 |
|
| 2002 |
Wong V, Gruebele M. Optically assisted atomic patterning: A multiple-quantum transition master equation study Chemical Physics Letters. 363: 182-188. DOI: 10.1016/S0009-2614(02)01167-3 |
0.517 |
|
| 2001 |
Jäger M, Nguyen H, Crane JC, Kelly JW, Gruebele M. The folding mechanism of a beta-sheet: the WW domain. Journal of Molecular Biology. 311: 373-93. PMID 11478867 DOI: 10.1006/Jmbi.2001.4873 |
0.579 |
|
| 2001 |
Wong V, Gruebele M. Nonexponential dephasing in a local random matrix model Physical Review a - Atomic, Molecular, and Optical Physics. 63: 1-9. DOI: 10.1103/Physreva.63.022502 |
0.519 |
|
| 2001 |
Strickler B, Gruebele M. Potentials interpolated with potentials: The six-dimensional B̃ state surface of thiophosgene Chemical Physics Letters. 349: 137-145. DOI: 10.1016/S0009-2614(01)01153-8 |
0.779 |
|
| 2000 |
Crane JC, Koepf EK, Kelly JW, Gruebele M. Mapping the transition state of the WW domain beta-sheet. Journal of Molecular Biology. 298: 283-92. PMID 10764597 DOI: 10.1006/Jmbi.2000.3665 |
0.346 |
|
| 2000 |
Ervin J, Sabelko J, Gruebele M. Submicrosecond real-time fluorescence sampling: Application to protein folding Journal of Photochemistry and Photobiology B: Biology. 54: 1-15. PMID 10739138 DOI: 10.1016/S1011-1344(00)00002-6 |
0.798 |
|
| 2000 |
Pearman R, Gruebele M. Approximate factorization of molecular potential surfaces II. Internal rotors Zeitschrift Fur Physikalische Chemie. 214: 1439-1466. DOI: 10.1524/Zpch.2000.214.11.1439 |
0.69 |
|
| 2000 |
Yang WY, Prince RB, Sabelko J, Moore JS, Gruebele M. Transition from exponential to nonexponential kinetics during formation of a nonbiological helix [17] Journal of the American Chemical Society. 122: 3248-3249. DOI: 10.1021/Ja993343+ |
0.782 |
|
| 1999 |
Gruebele M. The fast protein folding problem. Annual Review of Physical Chemistry. 50: 485-516. PMID 15012420 DOI: 10.1146/Annurev.Physchem.50.1.485 |
0.431 |
|
| 1999 |
Sabelko J, Ervin J, Gruebele M. Observation of strange kinetics in protein folding Proceedings of the National Academy of Sciences of the United States of America. 96: 6031-6036. PMID 10339536 DOI: 10.1073/Pnas.96.11.6031 |
0.828 |
|
| 1999 |
Wong V, Gruebele M. How does vibrational energy flow fill the molecular state space? Journal of Physical Chemistry A. 103: 10083-10092. DOI: 10.1021/Jp9919361 |
0.515 |
|
| 1998 |
Gruebele M, Wolynes PG. Satisfying turns in folding transitions. Nature Structural Biology. 5: 662-5. PMID 9699621 DOI: 10.1038/1354 |
0.362 |
|
| 1998 |
Bigwood R, Gruebele M, Leitner DM, Wolynes PG. The vibrational energy flow transition in organic molecules: theory meets experiment. Proceedings of the National Academy of Sciences of the United States of America. 95: 5960-4. PMID 9600899 DOI: 10.1073/Pnas.95.11.5960 |
0.326 |
|
| 1998 |
Pearman R, Gruebele M. On the importance of higher order anharmonic molecular couplings Journal of Chemical Physics. 108: 6561-6570. DOI: 10.1063/1.476070 |
0.706 |
|
| 1998 |
Sabelko J, Ervin J, Gruebele M. Cold-denatured ensemble of apomyoglobin: Implications for the early steps of folding Journal of Physical Chemistry B. 102: 1806-1819. DOI: 10.1021/Jp973178P |
0.812 |
|
| 1998 |
Gruebele M, Sabelko J, Ballew R, Ervin J. Laser Temperature Jump Induced Protein Refolding Accounts of Chemical Research. 31: 699-707. DOI: 10.1021/Ar970083X |
0.791 |
|
| 1998 |
Bigwood R, Milam B, Gruebele M. The ground state vibrational structure of SCCl2: Observation of backbone IVR Chemical Physics Letters. 287: 333-341. DOI: 10.1016/S0009-2614(98)00190-0 |
0.339 |
|
| 1997 |
Madsen D, Pearman R, Gruebele M. Approximate factorization of molecular potential surfaces. I. Basic approach Journal of Chemical Physics. 106: 5874-5893. DOI: 10.1063/1.473253 |
0.716 |
|
| 1996 |
Ballew RM, Sabelko J, Gruebele M. Observation of distinct nanosecond and microsecond protein folding events Nature Structural Biology. 3: 923-926. PMID 8901868 DOI: 10.1038/Nsb1196-923 |
0.811 |
|
| 1996 |
Ballew RM, Sabelko J, Gruebele M. Direct observation of fast protein folding: The initial collapse of apomyoglobin Proceedings of the National Academy of Sciences of the United States of America. 93: 5759-5764. PMID 8650166 DOI: 10.1073/Pnas.93.12.5759 |
0.823 |
|
| 1996 |
Ballew RM, Sabelko J, Reiner C, Gruebele M. A single‐sweep, nanosecond time resolution laser temperature‐jump apparatus Review of Scientific Instruments. 67: 3694-3699. DOI: 10.1063/1.1147137 |
0.786 |
|
| 1996 |
Ballew RM, Sabelko J, Reiner C, Gruebele M. A single-sweep, nanosecond time resolution laser temperature-jump apparatus Review of Scientific Instruments. 67: 3694-3699. |
0.779 |
|
| 1995 |
Bigwood R, Gruebele M. A simple matrix model of intramolecular vibrational redistribution and its implications Chemical Physics Letters. 235: 604-613. DOI: 10.1016/0009-2614(95)00170-9 |
0.301 |
|
| 1993 |
Gruebele M, Zewail AH. Femtosecond wave packet spectroscopy: Coherences, the potential, and structural determination The Journal of Chemical Physics. 98: 883-902. DOI: 10.1063/1.464253 |
0.477 |
|
| 1992 |
Sims IR, Gruebele M, Potter ED, Zewail AH. Femtosecond real‐time probing of reactions. VIII. The bimolecular reaction Br+I2 The Journal of Chemical Physics. 97: 4127-4148. DOI: 10.1063/1.463917 |
0.496 |
|
| 1990 |
Gruebele M, Roberts G, Dantus M, Bowman RM, Zewail AH. Femtosecond temporal spectroscopy and direct inversion to the potential: Application to iodine Chemical Physics Letters. 166: 459-469. DOI: 10.1016/0009-2614(90)87134-D |
0.623 |
|
| 1989 |
Heath JR, Cooksy AL, Gruebele MH, Schmuttenmaer CA, Saykally RJ. Diode-laser absorption spectroscopy of supersonic carbon cluster beams: the nu 3 spectrum of C5. Science (New York, N.Y.). 244: 564-6. PMID 11539817 DOI: 10.1126/Science.11539817 |
0.678 |
|
| 1989 |
Polak M, Gruebele M, DeKock BW, Saykally RJ. Velocity modulation infrared laser spectroscopy of molecular ions Molecular Physics. 66: 1193-1202. DOI: 10.1080/00268978900100801 |
0.462 |
|
| 1989 |
Dantus M, Bowman RM, Gruebele M, Zewail AH. Femtosecond real‐time probing of reactions. V. The reaction of IHgI The Journal of Chemical Physics. 91: 7437-7450. DOI: 10.1063/1.457267 |
0.613 |
|
| 1989 |
Potter E, Gruebele M, Khundkar L, Zewail A. Picosecond dissociation of ketene: Experimental state-to-state rates and tests of statistical theories Chemical Physics Letters. 164: 463-470. DOI: 10.1016/0009-2614(89)85239-X |
0.475 |
|
| 1988 |
Owrutsky J, Rosenbaum N, Tack L, Gruebele M, Polak M, Saykally RJ. Velocity-Modulation Infrared Laser Spectroscopy of Molecular Anions Philosophical Transactions of the Royal Society A. 324: 97-108. DOI: 10.1098/Rsta.1988.0003 |
0.646 |
|
| 1988 |
Polak M, Gruebele M, Peng GS, Saykally RJ. Velocity modulation infrared laser spectroscopy of negative ions: The (011)–(001) band of azide (N−3) The Journal of Chemical Physics. 89: 110-114. DOI: 10.1063/1.455697 |
0.421 |
|
| 1988 |
Gruebele M, Keim E, Stein A, Saykally RJ. Experimental potential functions for open and closed shell molecular ions: Adiabatic and nonadiabatic corrections in X3Σ− OH+ and X1Σ+ ArH+ Journal of Molecular Spectroscopy. 131: 343-366. DOI: 10.1016/0022-2852(88)90244-5 |
0.499 |
|
| 1987 |
Gruebele M, Polak M, Saykally RJ. Diode laser velocity modulation spectroscopy of carbanions: The CC stretching vibration of C2H− The Journal of Chemical Physics. 87: 1448-1449. DOI: 10.1063/1.453278 |
0.392 |
|
| 1987 |
Polak M, Gruebele M, Saykally RJ. Velocity modulation diode laser spectroscopy of negative ions: The ν1, ν1+ν2−ν2, ν1+ν3−ν3 bands of thiocyanate (NCS−) The Journal of Chemical Physics. 87: 3352-3356. DOI: 10.1063/1.453030 |
0.416 |
|
| 1987 |
Gruebele M, Polak M, Saykally RJ. A study of the structure and dynamics of the hydronium ion by high resolution infrared laser spectroscopy. II. The ν4 perpendicular bending mode of H3 16O+ The Journal of Chemical Physics. 87: 3347-3351. DOI: 10.1063/1.453029 |
0.423 |
|
| 1987 |
Gruebele M, Polak M, Saykally RJ. Velocity modulation infrared laser spectroscopy of negative ions: The ν3, ν3+ν1−ν1, ν3+ν2−ν2, and ν3+2ν2−2ν2 bands of cyanate (NCO−) The Journal of Chemical Physics. 86: 6631-6636. DOI: 10.1063/1.452409 |
0.442 |
|
| 1987 |
Polak M, Gruebele M, Saykally RJ. Velocity modulation laser spectroscopy of negative ions. The .nu.3 band of azide anion Journal of the American Chemical Society. 109: 2884-2887. DOI: 10.1021/Ja00244A005 |
0.367 |
|
| 1987 |
POLAK M, GRUEBELE M, SAYKALLY RJ. ChemInform Abstract: Velocity Modulation Laser Spectroscopy of Negative Ions: The ν3 Band of Azide (N- 3). Cheminform. 18. DOI: 10.1002/chin.198733006 |
0.37 |
|
| 1986 |
Gruebele M, Polak M, Saykally RJ. Velocity modulation laser spectroscopy of negative ions: The infrared spectrum of hydrosulfide (SH−) Journal of Chemical Physics. 86: 1698-1702. DOI: 10.1063/1.452168 |
0.481 |
|
| 1986 |
Gruebele M, Polak M, Blake GA, Saykally RJ. Determination of the Born–Oppenheimer potential function of CCl+ by velocity modulation diode laser spectroscopy The Journal of Chemical Physics. 85: 6276-6281. DOI: 10.1063/1.451457 |
0.555 |
|
| 1986 |
Gruebele MHW, Müller RP, Saykally RJ. Measurement of the rotational spectra of OH+ and OD+ by laser magnetic resonance The Journal of Chemical Physics. 84: 2489-2496. DOI: 10.1063/1.450368 |
0.442 |
|
| 1986 |
Gruebele M, Polak M, Saykally RJ. Velocity modulation laser spectroscopy of vibrationally excited CF+ determination of the molecular potential function Chemical Physics Letters. 125: 165-169. DOI: 10.1016/0009-2614(86)85096-5 |
0.466 |
|
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