Neil Shubin - Publications

Affiliations: 
University of Chicago, Chicago, IL 

71 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Senevirathne G, Shubin NH. Molecular basis of urostyle development in frogs: genes and gene regulation underlying an evolutionary novelty. Open Biology. 14: 240111. PMID 39191278 DOI: 10.1098/rsob.240111  0.725
2024 Hintermann A, Bolt CC, Brent Hawkins M, Valentin G, Lopez-Delisle L, Gitto S, Gómez PB, Mascrez B, Mansour TA, Nakamura T, Harris MP, Shubin NH, Duboule D. Evolutionary Co-Option of an Ancestral Cloacal Regulatory Landscape During the Emergence of Digits and Genitals. Biorxiv : the Preprint Server For Biology. PMID 38585989 DOI: 10.1101/2024.03.24.586442  0.344
2024 Stewart TA, Lemberg JB, Hillan EJ, Magallanes I, Daeschler EB, Shubin NH. The axial skeleton of . Proceedings of the National Academy of Sciences of the United States of America. 121: e2316106121. PMID 38564638 DOI: 10.1073/pnas.2316106121  0.707
2022 Jia J, Anderson JS, Jiang JP, Wu W, Shubin NH, Gao KQ. Ossification patterns of the carpus and tarsus in salamanders and impacts of preaxial dominance on the fin-to-limb transition. Science Advances. 8: eabq7669. PMID 36240271 DOI: 10.1126/sciadv.abq7669  0.32
2022 Stewart TA, Lemberg JB, Daly A, Daeschler EB, Shubin NH. A new elpistostegalian from the Late Devonian of the Canadian Arctic. Nature. PMID 35859171 DOI: 10.1038/s41586-022-04990-w  0.72
2022 Hawkins MB, Jandzik D, Tulenko FJ, Cass AN, Nakamura T, Shubin NH, Davis MC, Stock DW. An Fgf-Shh positive feedback loop drives growth in developing unpaired fins. Proceedings of the National Academy of Sciences of the United States of America. 119: e2120150119. PMID 35238632 DOI: 10.1073/pnas.2120150119  0.607
2021 Letelier J, Naranjo S, Sospedra-Arrufat I, Martinez-Morales JR, Lopez-Rios J, Shubin N, Gómez-Skarmeta JL. The / gene regulatory network precedes the origin of paired fins and reveals the deep homology between distal fins and digits. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34750251 DOI: 10.1073/pnas.2100575118  0.336
2021 Nakamura T, Schneider I, Shubin NH. Evolution: The deep genetic roots of tetrapod-specific traits. Current Biology : Cb. 31: R467-R469. PMID 34033765 DOI: 10.1016/j.cub.2021.03.096  0.712
2021 Lemberg JB, Daeschler EB, Shubin NH. The feeding system of : an intermediate between suction feeding and biting. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33526593 DOI: 10.1073/pnas.2016421118  0.694
2020 Ali S, Arif I, Iqbal A, Hussain I, Abrar M, Khan MR, Shubin N, Abbasi AA. Comparative genomic analysis of human GLI2 locus using slowly evolving fish revealed the ancestral gnathostome set of early developmental enhancers. Developmental Dynamics : An Official Publication of the American Association of Anatomists. PMID 33381902 DOI: 10.1002/dvdy.291  0.302
2020 Verissimo KM, Perez LN, Dragalzew AC, Senevirathne G, Darnet S, Barroso Mendes WR, Ariel Dos Santos Neves C, Monteiro Dos Santos E, Nazare de Sousa Moraes C, Elewa A, Shubin N, Fröbisch NB, de Freitas Sousa J, Schneider I. Salamander-like tail regeneration in the West African lungfish. Proceedings. Biological Sciences. 287: 20192939. PMID 32933441 DOI: 10.1098/Rspb.2019.2939  0.77
2020 Senevirathne G, Baumgart S, Shubin N, Hanken J, Shubin NH. Ontogeny of the anuran urostyle and the developmental context of evolutionary novelty. Proceedings of the National Academy of Sciences of the United States of America. PMID 31988131 DOI: 10.1073/Pnas.1917506117  0.75
2019 Stewart TA, Lemberg JB, Taft NK, Yoo I, Daeschler EB, Shubin NH. Fin ray patterns at the fin-to-limb transition. Proceedings of the National Academy of Sciences of the United States of America. PMID 31888998 DOI: 10.1073/Pnas.1915983117  0.648
2019 Turner N, Mikalauskaite D, Barone K, Flaherty K, Senevirathne G, Adachi N, Shubin NH, Nakamura T. The evolutionary origins and diversity of the neuromuscular system of paired appendages in batoids. Proceedings. Biological Sciences. 286: 20191571. PMID 31662089 DOI: 10.1098/Rspb.2019.1571  0.728
2019 Downs JP, Daeschler EB, Lo N, Carey EN, Shubin NH. Asterolepis alticristata n. sp. (Antiarchi) from the Upper Devonian (Frasnian) of Nunavut, Canada, and a report on the antiarch diversity of the Fram Formation Geodiversitas. 41: 679. DOI: 10.5252/Geodiversitas2019V41A19  0.678
2018 Letelier J, de la Calle-Mustienes E, Pieretti J, Naranjo S, Maeso I, Nakamura T, Pascual-Anaya J, Shubin NH, Schneider I, Martinez-Morales JR, Gómez-Skarmeta JL. A conserved Shh cis-regulatory module highlights a common developmental origin of unpaired and paired fins. Nature Genetics. PMID 29556077 DOI: 10.1038/S41588-018-0080-5  0.722
2017 Shubin N. Gene regulatory networks and network models in development and evolution. Proceedings of the National Academy of Sciences of the United States of America. 114: 5782-5783. PMID 28584088 DOI: 10.1073/Pnas.1610618114  0.322
2017 Davies TG, Rahman IA, Lautenschlager S, Cunningham JA, Asher RJ, Barrett PM, Bates KT, Bengtson S, Benson RB, Boyer DM, Braga J, Bright JA, Claessens LP, Cox PG, Dong XP, ... ... Shubin NH, et al. Open data and digital morphology. Proceedings. Biological Sciences. 284. PMID 28404779 DOI: 10.1098/Rspb.2017.0194  0.448
2016 Nakamura T, Gehrke AR, Lemberg J, Szymaszek J, Shubin NH. Digits and fin rays share common developmental histories. Nature. PMID 27533041 DOI: 10.1038/nature19322  0.334
2016 Adachi N, Robinson M, Goolsbee A, Shubin NH. Regulatory evolution of Tbx5 and the origin of paired appendages. Proceedings of the National Academy of Sciences of the United States of America. PMID 27503876 DOI: 10.1073/pnas.1609997113  0.317
2016 Braasch I, Gehrke AR, Smith JJ, Kawasaki K, Manousaki T, Pasquier J, Amores A, Desvignes T, Batzel P, Catchen J, Berlin AM, Campbell MS, Barrell D, Martin KJ, Mulley JF, ... ... Shubin NH, et al. Corrigendum: The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons. Nature Genetics. 48: 700. PMID 27230688 DOI: 10.1038/Ng0616-700C  0.684
2016 Braasch I, Gehrke AR, Smith JJ, Kawasaki K, Manousaki T, Pasquier J, Amores A, Desvignes T, Batzel P, Catchen J, Berlin AM, Campbell MS, Barrell D, Martin KJ, Mulley JF, ... ... Shubin NH, et al. The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons. Nature Genetics. 48: 427-37. PMID 26950095 DOI: 10.1038/Ng.3526  0.708
2016 Downs JP, Daeschler EB, Garcia VE, Shubin NH. A new large-bodied species of Bothriolepis (Antiarchi) from the Upper Devonian of Ellesmere Island, Nunavut, Canada Journal of Vertebrate Paleontology. 36: e1221833. DOI: 10.1080/02724634.2016.1221833  0.681
2015 Nakamura T, Klomp J, Pieretti J, Schneider I, Gehrke AR, Shubin NH. Molecular mechanisms underlying the exceptional adaptations of batoid fins. Proceedings of the National Academy of Sciences of the United States of America. PMID 26644578 DOI: 10.1073/Pnas.1521818112  0.752
2015 Pieretti J, Gehrke AR, Schneider I, Adachi N, Nakamura T, Shubin NH. Organogenesis in deep time: A problem in genomics, development, and paleontology. Proceedings of the National Academy of Sciences of the United States of America. 112: 4871-6. PMID 25901307 DOI: 10.1073/Pnas.1403665112  0.736
2015 Gehrke AR, Schneider I, de la Calle-Mustienes E, Tena JJ, Gomez-Marin C, Chandran M, Nakamura T, Braasch I, Postlethwait JH, Gómez-Skarmeta JL, Shubin NH. Deep conservation of wrist and digit enhancers in fish. Proceedings of the National Academy of Sciences of the United States of America. 112: 803-8. PMID 25535365 DOI: 10.1073/Pnas.1420208112  0.749
2014 Shubin NH, Daeschler EB, Jenkins FA. Pelvic girdle and fin of Tiktaalik roseae. Proceedings of the National Academy of Sciences of the United States of America. 111: 893-9. PMID 24449831 DOI: 10.1073/Pnas.1322559111  0.71
2013 Amemiya CT, Alföldi J, Lee AP, Fan S, Philippe H, Maccallum I, Braasch I, Manousaki T, Schneider I, Rohner N, Organ C, Chalopin D, Smith JJ, Robinson M, Dorrington RA, ... ... Shubin N, et al. The African coelacanth genome provides insights into tetrapod evolution. Nature. 496: 311-6. PMID 23598338 DOI: 10.1038/Nature12027  0.747
2013 Schneider I, Shubin NH. The origin of the tetrapod limb: from expeditions to enhancers. Trends in Genetics : Tig. 29: 419-26. PMID 23434323 DOI: 10.1016/J.Tig.2013.01.012  0.757
2013 Downs JP, Daeschler EB, Jenkins FA, Shubin NH. Holoptychius bergmanni sp. nov. (sarcopterygii, porolepiformes) from the upper devonian of nunavut, Canada, and a review of holoptychius taxonomy Proceedings of the Academy of Natural Sciences of Philadelphia. 162: 47-59. DOI: 10.1635/053.162.0104  0.611
2012 Schneider I, Shubin NH. Making limbs from fins. Developmental Cell. 23: 1121-2. PMID 23237946 DOI: 10.1016/J.Devcel.2012.11.011  0.712
2012 Gao KQ, Shubin NH. Late Jurassic salamandroid from western Liaoning, China. Proceedings of the National Academy of Sciences of the United States of America. 109: 5767-72. PMID 22411790 DOI: 10.1073/pnas.1009828109  0.304
2012 Kammerer CF, Nesbitt SJ, Shubin NH. The first silesaurid dinosauriform from the Late Triassic of Morocco Acta Palaeontologica Polonica. 57: 277-284. DOI: 10.4202/App.2011.0015  0.647
2011 King HM, Shubin NH, Coates MI, Hale ME. Behavioral evidence for the evolution of walking and bounding before terrestriality in sarcopterygian fishes. Proceedings of the National Academy of Sciences of the United States of America. 108: 21146-51. PMID 22160688 DOI: 10.1073/Pnas.1118669109  0.347
2011 Schneider I, Aneas I, Gehrke AR, Dahn RD, Nobrega MA, Shubin NH. Appendage expression driven by the Hoxd Global Control Region is an ancient gnathostome feature. Proceedings of the National Academy of Sciences of the United States of America. 108: 12782-6. PMID 21765002 DOI: 10.1073/Pnas.1109993108  0.74
2011 Fröbisch NB, Shubin NH. Salamander limb development: integrating genes, morphology, and fossils. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 240: 1087-99. PMID 21465623 DOI: 10.1002/dvdy.22629  0.357
2011 Gillis JA, Rawlinson KA, Bell J, Lyon WS, Baker CV, Shubin NH. Holocephalan embryos provide evidence for gill arch appendage reduction and opercular evolution in cartilaginous fishes. Proceedings of the National Academy of Sciences of the United States of America. 108: 1507-12. PMID 21220324 DOI: 10.1073/pnas.1012968108  0.489
2011 Downs JP, Daeschler EB, Jenkins FA, Shubin NH. A new species of Laccognathus (Sarcopterygii, Porolepiformes) from the Late Devonian of Ellesmere Island, Nunavut, Canada Journal of Vertebrate Paleontology. 31: 981-996. DOI: 10.1080/02724634.2011.599462  0.696
2009 Gillis JA, Shubin NH. The evolution of gnathostome development: Insight from chondrichthyan embryology. Genesis (New York, N.Y. : 2000). 47: 825-41. PMID 19882670 DOI: 10.1002/dvg.20567  0.361
2009 Shubin N, Tabin C, Carroll S. Deep homology and the origins of evolutionary novelty. Nature. 457: 818-23. PMID 19212399 DOI: 10.1038/Nature07891  0.388
2009 Gillis JA, Dahn RD, Shubin NH. Chondrogenesis and homology of the visceral skeleton in the little skate, Leucoraja erinacea (Chondrichthyes: Batoidea). Journal of Morphology. 270: 628-43. PMID 19117064 DOI: 10.1002/Jmor.10710  0.31
2009 Daeschler EB, Clack JA, Shubin NH. Late Devonian tetrapod remains from Red Hill, Pennsylvania, USA: How much diversity? Acta Zoologica. 90: 306-317. DOI: 10.1111/J.1463-6395.2008.00361.X  0.681
2008 Downs JP, Daeschler EB, Jenkins FA, Shubin NH. The cranial endoskeleton of Tiktaalik roseae. Nature. 455: 925-9. PMID 18923515 DOI: 10.1038/Nature07189  0.678
2007 Davis MC, Dahn RD, Shubin NH. An autopodial-like pattern of Hox expression in the fins of a basal actinopterygian fish. Nature. 447: 473-6. PMID 17522683 DOI: 10.1038/Nature05838  0.627
2007 Dahn RD, Davis MC, Pappano WN, Shubin NH. Sonic hedgehog function in chondrichthyan fins and the evolution of appendage patterning. Nature. 445: 311-4. PMID 17187056 DOI: 10.1038/Nature05436  0.627
2006 Shubin NH, Daeschler EB, Jenkins FA. The pectoral fin of Tiktaalik roseae and the origin of the tetrapod limb. Nature. 440: 764-71. PMID 16598250 DOI: 10.1038/Nature04637  0.711
2006 Daeschler EB, Shubin NH, Jenkins FA. A Devonian tetrapod-like fish and the evolution of the tetrapod body plan. Nature. 440: 757-63. PMID 16598249 DOI: 10.1038/Nature04639  0.718
2006 Dahn R, Davis M, Shubin N. Conserved mechanisms in vertebrate A/P appendage patterning Developmental Biology. 295: 391-392. DOI: 10.1016/J.Ydbio.2006.04.202  0.576
2005 Franssen RA, Marks S, Wake D, Shubin N. Limb chondrogenesis of the seepage salamander, Desmognathus aeneus (amphibia: plethodontidae). Journal of Morphology. 265: 87-101. PMID 15880507 DOI: 10.1002/Jmor.10339  0.777
2004 Davis MC, Shubin NH, Force A. Pectoral fin and girdle development in the basal actinopterygians Polyodon spathula and Acipenser transmontanus. Journal of Morphology. 262: 608-28. PMID 15376275 DOI: 10.1002/Jmor.10264  0.604
2004 Shubin NH, Daeschler EB, Coates MI. The early evolution of the tetrapod humerus. Science (New York, N.Y.). 304: 90-3. PMID 15064415 DOI: 10.1126/Science.1094295  0.71
2004 Davis MC, Shubin N, Daeschler EB. A new specimen of Sauripterus taylori (Sarcopterygii, Osteichthyes) from the Famennian Catskill Formation of North America Journal of Vertebrate Paleontology. 24: 26-40.  0.644
2001 Gao KQ, Shubin NH. Late Jurassic salamanders from northern China. Nature. 410: 574-7. PMID 11279493 DOI: 10.1038/35069051  0.333
1998 Torok MA, Gardiner DM, Shubin NH, Bryant SV. Expression of HoxD genes in developing and regenerating axolotl limbs. Developmental Biology. 200: 225-33. PMID 9705229 DOI: 10.1006/dbio.1998.8956  0.303
1998 Daeschler EB, Shubin N. Fish with fingers? Nature. 391: 133-133. DOI: 10.1038/34317  0.698
1998 Shubin N. Evolutionary cut and paste Nature. 394: 12-13. DOI: 10.1038/27755  0.386
1998 Daeschler EB, Shubin N. Fish with fingers? [7] (multiple letters) Nature. 391: 133.  0.631
1997 Shubin N, Tabin C, Carroll S. Fossils, genes and the evolution of animal limbs. Nature. 388: 639-48. PMID 9262397 DOI: 10.1038/41710  0.448
1997 Jenkins FA, Gatesy SM, Shubin NH, Amaral WW. Haramiyids and Triassic mammalian evolution. Nature. 385: 715-8. PMID 9034187 DOI: 10.1038/385715A0  0.34
1996 SHUBIN N, WAKE D. Phytogeny, Variation, and Morphological Integration American Zoologist. 36: 51-60. DOI: 10.1093/Icb/36.1.51  0.383
1996 Sues H, Shubin NH, Olsen PE, Amaral WW. On the cranial structure of a new protosuchid (Archosauria: Crocodyliformes) from the McCoy Brook Formation (Lower Jurassic) of Nova Scotia, Canada Journal of Vertebrate Paleontology. 16: 34-41. DOI: 10.1080/02724634.1996.10011281  0.57
1995 Shubin N, Wake DB, Crawford AJ. MORPHOLOGICAL VARIATION IN THE LIMBS OF TARICHA GRANULOSA (CAUDATA: SALAMANDRIDAE): EVOLUTIONARY AND PHYLOGENETIC IMPLICATIONS. Evolution; International Journal of Organic Evolution. 49: 874-884. PMID 28564880 DOI: 10.1111/J.1558-5646.1995.Tb02323.X  0.408
1995 Shubin NH, Jenkins FA. An early Jurassic jumping frog Nature. 377: 49-52. DOI: 10.1038/377049A0  0.328
1995 Daeschler EB, Shubin N. Tetrapod origins Paleobiology. 21: 404-409.  0.67
1994 Daeschler EB, Shubin NH, Thomson KS, Amaral WW. A devonian tetrapod from north america. Science (New York, N.Y.). 265: 639-42. PMID 17752761 DOI: 10.1126/Science.265.5172.639  0.711
1994 Sues HD, Shubin NH, Olsen PE. A new sphenodontian (Lepidosauria: Rhynchocephalia) from the McCoy Brook Formation (Lower Jurassic) of Nova Scotia, Canada Journal of Vertebrate Paleontology. 14: 327-340. DOI: 10.1080/02724634.1994.10011563  0.576
1992 Sues HD, Hopson JA, Shubin NH. Affinities of ?Scalenodontoides plemmyridon Hopson, 1984 (Synapsida: Cynodontia) from the Upper Triassic of Nova Scotia Journal of Vertebrate Paleontology. 12: 168-171. DOI: 10.1080/02724634.1992.10011447  0.572
1991 Shubin NH, Crompton AW, Sues HD, Olsen PE. New fossil evidence on the sister-group of mammals and early mesozoic faunal distributions. Science (New York, N.Y.). 251: 1063-5. PMID 17802092 DOI: 10.1126/Science.251.4997.1063  0.737
1991 Shubin NH, Sues H. Biogeography of early Mesozoic continental tetrapods: patterns and implications Paleobiology. 17: 214-230. DOI: 10.1017/S0094837300010575  0.591
1988 Oster GF, Shubin N, Murray JD, Alberch P. EVOLUTION AND MORPHOGENETIC RULES: THE SHAPE OF THE VERTEBRATE LIMB IN ONTOGENY AND PHYLOGENY. Evolution; International Journal of Organic Evolution. 42: 862-884. PMID 28581162 DOI: 10.1111/J.1558-5646.1988.Tb02508.X  0.431
1987 Olsen PE, Shubin NH, Anders MH. New early Jurassic tetrapod assemblages constrain Triassic-Jurassic tetrapod extinction event. Science (New York, N.Y.). 237: 1025-9. PMID 3616622 DOI: 10.1126/Science.3616622  0.385
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