Fernando Alda - Publications

University of Tennessee Chattanooga 

42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Hart PB, Arnold RJ, Alda F, Kenaley CP, Pietsch TW, Hutchinson D, Chakrabarty P. Evolutionary relationships of anglerfishes (Lophiiformes) reconstructed using ultraconserved elements. Molecular Phylogenetics and Evolution. 171: 107459. PMID 35351632 DOI: 10.1016/j.ympev.2022.107459  0.763
2021 Alda F, Ludt WB, Elías DJ, McMahan CD, Chakrabarty P. Comparing ultraconserved elements and exons for phylogenomic analyses of Middle American cichlids: when data agree to disagree. Genome Biology and Evolution. PMID 34272856 DOI: 10.1093/gbe/evab161  0.584
2020 Rossi NA, Menchaca-Rodriguez A, Antelo R, Wilson B, McLaren K, Mazzotti F, Crespo R, Wasilewski J, Alda F, Doadrio I, Barros TR, Hekkala E, Alonso-Tabet M, Alonso-Giménez Y, Lopez M, et al. High levels of population genetic differentiation in the American crocodile (Crocodylus acutus). Plos One. 15: e0235288. PMID 32614920 DOI: 10.1371/Journal.Pone.0235288  0.409
2020 Faircloth BC, Alda F, Hoekzema K, Burns MD, Oliveira C, Albert JS, Melo BF, Ochoa LE, Roxo FF, Chakrabarty P, Sidlauskas BL, Alfaro ME. A Target Enrichment Bait Set for Studying Relationships among Ostariophysan Fishes Copeia. 108: 47. DOI: 10.1643/Cg-18-139  0.662
2020 García JT, Domínguez‐Villaseñor J, Alda F, Calero‐Riestra M, Olea PP, Fargallo JA, Martínez‐Padilla J, Herranz J, Oñate JJ, Santamaría A, Motro Y, Attie C, Bretagnolle V, Delibes J, Viñuela J. A complex scenario of glacial survival in Mediterranean and continental refugia of a temperate continental vole species (Microtus arvalis) in Europe Journal of Zoological Systematics and Evolutionary Research. 58: 459-474. DOI: 10.1111/Jzs.12323  0.351
2018 Alda F, Tagliacollo VA, Bernt MJ, Waltz BT, Ludt WB, Faircloth BC, Alfaro ME, Albert JS, Chakrabarty P. Resolving Deep Nodes in an Ancient Radiation of Neotropical Fishes in the Presence of Conflicting Signals from Incomplete Lineage Sorting. Systematic Biology. PMID 30521024 DOI: 10.1093/Sysbio/Syy085  0.774
2018 Schönhuth S, Gagne RB, Alda F, Neely DA, Mayden RL, Blum MJ. Phylogeography of the widespread creek chub Semotilus atromaculatus (Cypriniformes: Leuciscidae). Journal of Fish Biology. PMID 30101564 DOI: 10.1111/Jfb.13778  0.474
2017 Alda F, Adams AJ, McMillan WO, Chakrabarty P. Complete mitochondrial genomes of three Neotropical sleeper gobies: , and (Gobiiformes: Eleotridae). Mitochondrial Dna. Part B, Resources. 2: 747-750. PMID 33490475 DOI: 10.1080/23802359.2017.1390412  0.608
2017 Alda F, Adams AJ, Chakrabarty P, McMillan WO. Mitogenomic divergence between three pairs of putative geminate fishes from Panama. Mitochondrial Dna. Part B, Resources. 3: 1-5. PMID 33474047 DOI: 10.1080/23802359.2017.1413288  0.659
2017 Burress ED, Alda F, Duarte A, Loureiro M, Armbruster JW, Chakrabarty P. Phylogenomics of pike cichlids (Cichlidae: Crenicichla): the rapid evolution and trophic diversification of an incipient species flock. Journal of Evolutionary Biology. PMID 29044782 DOI: 10.1111/Jeb.13196  0.671
2017 Le Pendu J, Abrantes J, Bertagnoli S, Guitton JS, Le Gall-Reculé G, Lopes AM, Marchandeau S, Alda F, Almeida T, Célio AP, Bárcena J, Burmakina G, Blanco E, Calvete C, Cavadini P, et al. Proposal for a unified classification system and nomenclature of lagoviruses. The Journal of General Virology. PMID 28714849 DOI: 10.1099/Jgv.0.000840  0.426
2017 Chakrabarty P, Faircloth BC, Alda F, Ludt WB, McMahan CD, Near TJ, Dornburg A, Albert JS, Arroyave J, Stiassny ML, Sorenson L, Alfaro ME. Phylogenomic Systematics of Ostariophysan fishes: Ultraconserved Elements Support the Surprising Non-monophyly of Characiformes. Systematic Biology. PMID 28334176 DOI: 10.1093/Sysbio/Syx038  0.726
2017 Alda F, Adams AJ, Chakrabarty P, McMillan WO. Mitogenomic divergence between three pairs of putative geminate fishes from Panama Mitochondrial Dna Part B. 3: 1-5. DOI: 10.1080/23802359.2017.1413288  0.625
2017 Alda F, Adams AJ, McMillan WO, Chakrabarty P. Complete mitochondrial genomes of three Neotropical sleeper gobies: Eleotris amblyopsis, E. picta and Hemieleotris latifasciata (Gobiiformes: Eleotridae) Mitochondrial Dna Part B. 2: 747-750. DOI: 10.1080/23802359.2017.1390412  0.618
2016 Picq S, Alda F, Bermingham E, Krahe R. Drift-driven evolution of electric signals in a Neotropical knifefish. Evolution; International Journal of Organic Evolution. PMID 27436179 DOI: 10.1111/Evo.13010  0.405
2016 Alda F, Gagne RB, Walter RP, Hogan JD, Moody KN, Zink F, Mcintyre PB, Gilliam JF, Blum MJ. Colonization and demographic expansion of freshwater fauna across the Hawaiian Archipelago. Journal of Evolutionary Biology. PMID 27369460 DOI: 10.1111/Jeb.12929  0.4
2016 Galván-Quesada S, Doadrio I, Alda F, Perdices A, Reina RG, García Varela M, Hernández N, Campos Mendoza A, Bermingham E, Domínguez-Domínguez O. Molecular Phylogeny and Biogeography of the Amphidromous Fish Genus Dormitator Gill 1861 (Teleostei: Eleotridae). Plos One. 11: e0153538. PMID 27074006 DOI: 10.1371/Journal.Pone.0153538  0.508
2016 Rossi Lafferriere NA, Antelo R, Alda F, Mårtensson D, Hailer F, Castroviejo-Fisher S, Ayarzagüena J, Ginsberg JR, Castroviejo J, Doadrio I, Vilá C, Amato G. Multiple Paternity in a Reintroduced Population of the Orinoco Crocodile (Crocodylus intermedius) at the El Frío Biological Station, Venezuela. Plos One. 11: e0150245. PMID 26982578 DOI: 10.1371/Journal.Pone.0150245  0.378
2016 Strobel HM, Alda F, Sprehn CG, Blum MJ, Heins DC. Geographic and host-mediated population genetic structure in a cestode parasite of the three-spined stickleback Biological Journal of the Linnean Society. 119: 381-396. DOI: 10.1111/Bij.12826  0.335
2016 Glotzbecker GJ, Alda F, Broughton RE, Neely DA, Mayden RL, Blum MJ. Geographic independence and phylogenetic diversity of red shiner introductions Conservation Genetics. 1-15. DOI: 10.1007/S10592-016-0822-9  0.448
2015 Calvo M, Alda F, Oliverio M, Templado J, Machordom A. Surviving the Messinian Salinity Crisis? Divergence patterns in the genus Dendropoma (Gastropoda: Vermetidae) in the Mediterranean Sea. Molecular Phylogenetics and Evolution. 91: 17-26. PMID 26002830 DOI: 10.1016/J.Ympev.2015.05.004  0.448
2015 Bagley JC, Alda F, Breitman MF, Bermingham E, van den Berghe EP, Johnson JB. Assessing species boundaries using multilocus species delimitation in a morphologically conserved group of neotropical freshwater fishes, the Poecilia sphenops species complex (Poeciliidae). Plos One. 10: e0121139. PMID 25849959 DOI: 10.1371/Journal.Pone.0121139  0.526
2014 Alda F, Doadrio I. Spatial genetic structure across a hybrid zone between European rabbit subspecies. Peerj. 2: e582. PMID 25289181 DOI: 10.7717/Peerj.582  0.385
2014 Picq S, Alda F, Krahe R, Bermingham E. Miocene and Pliocene colonization of the Central American Isthmus by the weakly electric fish Brachyhypopomus occidentalis (Hypopomidae, Gymnotiformes) Journal of Biogeography. 41: 1520-1532. DOI: 10.1111/Jbi.12309  0.466
2013 Alda F, Reina RG, Doadrio I, Bermingham E. Phylogeny and biogeography of the Poecilia sphenops species complex (Actinopterygii, Poeciliidae) in Central America. Molecular Phylogenetics and Evolution. 66: 1011-26. PMID 23277160 DOI: 10.1016/J.Ympev.2012.12.012  0.446
2013 Alda F, García J, García JT, Suárez-Seoane S. Local genetic structure on breeding grounds of a long-distance migrant passerine: the bluethroat (Luscinia svecica) in Spain. The Journal of Heredity. 104: 36-46. PMID 23008445 DOI: 10.1093/Jhered/Ess071  0.341
2013 Alda F, Picq S, de León LF, González R, Walz H, Bermingham E, Krahe R. First record of Gymnotus henni (Albert, Crampton and Maldonado, 2003) in Panama: Phylogenetic position and electric signal characterization Check List. 9: 655-659. DOI: 10.15560/9.3.655  0.401
2013 Alda F, Ruiz-López MJ, García FJ, Gompper ME, Eggert LS, García JT. Genetic evidence for multiple introduction events of raccoons (Procyon lotor) in Spain Biological Invasions. 15: 687-698. DOI: 10.1007/S10530-012-0318-6  0.38
2013 Alda F, González MA, Olea PP, Ena V, Godinho R, Drovetski SV. Genetic diversity, structure and conservation of the endangered Cantabrian Capercaillie in a unique peripheral habitat European Journal of Wildlife Research. 59: 719-728. DOI: 10.1007/S10344-013-0727-6  0.355
2012 Ornelas-García CP, Alda F, Díaz-Pardo E, Gutiérrez-Hernández A, Doadrio I. Genetic diversity shaped by historical and recent factors in the live-bearing twoline skiffia Neotoca bilineata. Journal of Fish Biology. 81: 1963-1984. PMID 23130693 DOI: 10.1111/J.1095-8649.2012.03456.X  0.427
2012 Cabezas P, Alda F, Macpherson E, Machordom A. Genetic characterization of the endangered and endemic anchialine squat lobster Munidopsis polymorpha from Lanzarote (Canary Islands): management implications Ices Journal of Marine Science. 69: 1030-1037. DOI: 10.1093/Icesjms/Fss062  0.459
2012 García JT, García FJ, Alda F, González JL, Aramburu MJ, Cortés Y, Prieto B, Pliego B, Pérez M, Herrera J, García-Román L. Recent invasion and status of the raccoon (Procyon lotor) in Spain Biological Invasions. 14: 1305-1310. DOI: 10.1007/S10530-011-0157-X  0.403
2012 Calero-Riestra M, Alda F, Dávila JA, García JT. Characterization of polymorphic microsatellite loci for the Tawny Pipit Anthus campestris and their utility in other steppe birds European Journal of Wildlife Research. 58: 379-383. DOI: 10.1007/S10344-011-0580-4  0.418
2011 Garcia JT, Alda F, Terraube J, Mougeot F, Sternalski A, Bretagnolle V, Arroyo B. Demographic history, genetic structure and gene flow in a steppe-associated raptor species Bmc Evolutionary Biology. 11. PMID 22093489 DOI: 10.1186/1471-2148-11-333  0.435
2011 Rodríguez R, Ramírez O, Valdiosera CE, García N, Alda F, Madurell-Malapeira J, Marmi J, Doadrio I, Willerslev E, Götherström A, Arsuaga JL, Thomas MG, Lalueza-Fox C, Dalén L. 50,000 years of genetic uniformity in the critically endangered Iberian lynx. Molecular Ecology. 20: 3785-95. PMID 21864323 DOI: 10.1111/J.1365-294X.2011.05231.X  0.35
2011 Merchán T, Rocha G, Alda F, Silva E, Thompson G, de Trucios SH, Pagés A. Detection of rabbit haemorrhagic disease virus (RHDV) in nonspecific vertebrate hosts sympatric to the European wild rabbit (Oryctolagus cuniculus). Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 11: 1469-74. PMID 21600308 DOI: 10.1016/J.Meegid.2011.05.001  0.306
2010 Alda F, Gaitero T, Suárez M, Merchán T, Rocha G, Doadrio I. Evolutionary history and molecular epidemiology of rabbit haemorrhagic disease virus in the Iberian Peninsula and Western Europe. Bmc Evolutionary Biology. 10: 347. PMID 21067589 DOI: 10.1186/1471-2148-10-347  0.371
2010 Pedraza-Lara C, Alda F, Carranza S, Doadrio I. Mitochondrial DNA structure of the Iberian populations of the white-clawed crayfish, Austropotamobius italicus italicus (Faxon, 1914). Molecular Phylogenetics and Evolution. 57: 327-42. PMID 20601016 DOI: 10.1016/J.Ympev.2010.06.007  0.403
2009 Alda F, Gaitero T, Suárez M, Doadrio I. Molecular characterisation and recent evolution of myxoma virus in Spain. Archives of Virology. 154: 1659-70. PMID 19768631 DOI: 10.1007/S00705-009-0494-6  0.326
2008 Domínguez-Domínguez O, Alda F, de León GP, García-Garitagoitia JL, Doadrio I. Evolutionary history of the endangered fish Zoogoneticus quitzeoensis (Bean, 1898) (Cyprinodontiformes: Goodeidae) using a sequential approach to phylogeography based on mitochondrial and nuclear DNA data. Bmc Evolutionary Biology. 8: 161. PMID 18503717 DOI: 10.1186/1471-2148-8-161  0.407
2008 Alda F, Inogés J, Alcaraz L, Oria J, Aranda A, Doadrio I. Looking for the Iberian lynx in central Spain: a needle in a haystack? Animal Conservation. 11: 297-305. DOI: 10.1111/J.1469-1795.2008.00185.X  0.448
2007 Domínguez-Domínguez O, Boto L, Alda F, Pérez-Ponce De León G, Doadrio I. Human impacts on drainages of the Mesa Central, Mexico, and its genetic effects on an endangered fish, Zoogoneticus quitzeoensis. Conservation Biology : the Journal of the Society For Conservation Biology. 21: 168-80. PMID 17298523 DOI: 10.1111/J.1523-1739.2006.00608.X  0.446
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