| Year |
Citation |
Score |
| 2023 |
Shi X, Pumm AK, Maffeo C, Kohler F, Feigl E, Zhao W, Verschueren D, Golestanian R, Aksimentiev A, Dietz H, Dekker C. A DNA turbine powered by a transmembrane potential across a nanopore. Nature Nanotechnology. PMID 37884658 DOI: 10.1038/s41565-023-01527-8 |
0.34 |
|
| 2023 |
Joshi H, Li CY, Aksimentiev A. All-Atom Molecular Dynamics Simulations of Membrane-Spanning DNA Origami Nanopores. Methods in Molecular Biology (Clifton, N.J.). 2639: 113-128. PMID 37166714 DOI: 10.1007/978-1-0716-3028-0_7 |
0.421 |
|
| 2023 |
Chen K, Choudhary A, Sandler SE, Maffeo C, Ducati C, Aksimentiev A, Keyser UF. Super-Resolution Detection of DNA Nanostructures Using a Nanopore. Advanced Materials (Deerfield Beach, Fla.). e2207434. PMID 36630969 DOI: 10.1002/adma.202207434 |
0.317 |
|
| 2022 |
Scherf M, Scheffler F, Maffeo C, Kemper U, Ye J, Aksimentiev A, Seidel R, Reibetanz U. Trapping of protein cargo molecules inside DNA origami nanocages. Nanoscale. PMID 36445741 DOI: 10.1039/d2nr05356j |
0.449 |
|
| 2022 |
Li Y, Maffeo C, Joshi H, Aksimentiev A, Ménard B, Schulman R. Leakless end-to-end transport of small molecules through micron-length DNA nanochannels. Science Advances. 8: eabq4834. PMID 36070388 DOI: 10.1126/sciadv.abq4834 |
0.346 |
|
| 2022 |
Maffeo C, Chou HY, Aksimentiev A. Single-molecule biophysics experiments : Toward a physical model of a replisome. Iscience. 25: 104264. PMID 35521518 DOI: 10.1016/j.isci.2022.104264 |
0.397 |
|
| 2022 |
Tabatabaei SK, Pham B, Pan C, Liu J, Chandak S, Shorkey SA, Hernandez AG, Aksimentiev A, Chen M, Schroeder CM, Milenkovic O. Expanding the Molecular Alphabet of DNA-Based Data Storage Systems with Neural Network Nanopore Readout Processing. Nano Letters. PMID 35212544 DOI: 10.1021/acs.nanolett.1c04203 |
0.395 |
|
| 2022 |
Choudhary A, Maffeo C, Aksimentiev A. Multi-resolution simulation of DNA transport through large synthetic nanostructures. Physical Chemistry Chemical Physics : Pccp. 24: 2706-2716. PMID 35050282 DOI: 10.1039/d1cp04589j |
0.438 |
|
| 2021 |
Morzy D, Joshi H, Sandler SE, Aksimentiev A, Keyser UF. Membrane Activity of a DNA-Based Ion Channel Depends on the Stability of Its Double-Stranded Structure. Nano Letters. PMID 34767378 DOI: 10.1021/acs.nanolett.1c03791 |
0.444 |
|
| 2021 |
Yoo J, Park S, Maffeo C, Ha T, Aksimentiev A. DNA sequence and methylation prescribe the inside-out conformational dynamics and bending energetics of DNA minicircles. Nucleic Acids Research. PMID 34718725 DOI: 10.1093/nar/gkab967 |
0.618 |
|
| 2021 |
Ochmann SE, Joshi H, Büber E, Franquelim HG, Stegemann P, Saccà B, Keyser UF, Aksimentiev A, Tinnefeld P. DNA Origami Voltage Sensors for Transmembrane Potentials with Single-Molecule Sensitivity. Nano Letters. PMID 34662130 DOI: 10.1021/acs.nanolett.1c02584 |
0.312 |
|
| 2021 |
Liu F, Liu X, Shi Q, Maffeo C, Kojima M, Dong L, Aksimentiev A, Huang Q, Fukuda T, Arai T. A tetrahedral DNA nanorobot with conformational change in response to molecular trigger. Nanoscale. 13: 15552-15559. PMID 34596187 DOI: 10.1039/d1nr02757c |
0.411 |
|
| 2021 |
Jones SF, Joshi H, Terry SJ, Burns JR, Aksimentiev A, Eggert US, Howorka S. Hydrophobic Interactions between DNA Duplexes and Synthetic and Biological Membranes. Journal of the American Chemical Society. PMID 34015219 DOI: 10.1021/jacs.0c13235 |
0.455 |
|
| 2021 |
Morzy D, Rubio-Sánchez R, Joshi H, Aksimentiev A, Di Michele L, Keyser UF. Cations Regulate Membrane Attachment and Functionality of DNA Nanostructures. Journal of the American Chemical Society. PMID 33961742 DOI: 10.1021/jacs.1c00166 |
0.406 |
|
| 2021 |
Winogradoff D, Li PY, Joshi H, Quednau L, Maffeo C, Aksimentiev A. Chiral Systems Made from DNA. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). 8: 2003113. PMID 33717850 DOI: 10.1002/advs.202003113 |
0.393 |
|
| 2021 |
Hübner K, Joshi H, Aksimentiev A, Stefani FD, Tinnefeld P, Acuna GP. Determining the In-Plane Orientation and Binding Mode of Single Fluorescent Dyes in DNA Origami Structures. Acs Nano. PMID 33660975 DOI: 10.1021/acsnano.0c10259 |
0.417 |
|
| 2021 |
Yang W, Radha B, Choudhary A, You Y, Mettela G, Geim AK, Aksimentiev A, Keerthi A, Dekker C. Translocation of DNA through Ultrathin Nanoslits. Advanced Materials (Deerfield Beach, Fla.). e2007682. PMID 33522015 DOI: 10.1002/adma.202007682 |
0.418 |
|
| 2020 |
Choudhary A, Joshi H, Chou HY, Sarthak K, Wilson J, Maffeo C, Aksimentiev A. High-Fidelity Capture, Threading, and Infinite-Depth Sequencing of Single DNA Molecules with a Double-Nanopore System. Acs Nano. PMID 33174731 DOI: 10.1021/acsnano.0c06191 |
0.424 |
|
| 2020 |
Phillips JC, Hardy DJ, Maia JDC, Stone JE, Ribeiro JV, Bernardi RC, Buch R, Fiorin G, Hénin J, Jiang W, McGreevy R, Melo MCR, Radak BK, Skeel RD, Singharoy A, ... ... Aksimentiev A, et al. Scalable molecular dynamics on CPU and GPU architectures with NAMD. The Journal of Chemical Physics. 153: 044130. PMID 32752662 DOI: 10.1063/5.0014475 |
0.359 |
|
| 2020 |
Yoo J, Winogradoff D, Aksimentiev A. Molecular dynamics simulations of DNA-DNA and DNA-protein interactions. Current Opinion in Structural Biology. 64: 88-96. PMID 32682257 DOI: 10.1016/J.Sbi.2020.06.007 |
0.667 |
|
| 2020 |
Shankla M, Aksimentiev A. Molecular Transport Across Ionic Liquid--Aqueous Electrolyte Interface in a MoS nanopore. Acs Applied Materials & Interfaces. PMID 32393017 DOI: 10.1021/Acsami.0C04523 |
0.487 |
|
| 2020 |
Sobota D, Joshi H, Ohmann A, Aksimentiev A, Keyser UF. Tailoring interleaflet lipid transfer with a DNA-based synthetic enzyme. Nano Letters. PMID 32374167 DOI: 10.1021/Acs.Nanolett.0C00990 |
0.418 |
|
| 2020 |
Maffeo C, Aksimentiev A. MrDNA: a multi-resolution model for predicting the structure and dynamics of DNA systems. Nucleic Acids Research. PMID 32232413 DOI: 10.1093/Nar/Gkaa200 |
0.526 |
|
| 2020 |
Winogradoff D, John S, Aksimentiev A. Protein unfolding by SDS: the microscopic mechanisms and the properties of the SDS-protein assembly. Nanoscale. 12: 5422-5434. PMID 32080694 DOI: 10.1039/C9Nr09135A |
0.327 |
|
| 2020 |
Zeng H, Roy A, Joshi H, Ye R, Shen J, Chen F, Aksimentiev A. Polyhydrazide-based organic nanotubes as extremely efficient and highly selective artificial iodide channels. Angewandte Chemie (International Ed. in English). PMID 31950583 DOI: 10.1002/Anie.201916287 |
0.342 |
|
| 2020 |
Tripathi P, Shuai L, Joshi H, Yamazaki H, Fowle WH, Aksimentiev A, Fenniri H, Wanunu M. Rosette Nanotube Porins as Ion Selective Transporters and Single-Molecule Sensors. Journal of the American Chemical Society. PMID 31913034 DOI: 10.1021/Jacs.9B10993 |
0.367 |
|
| 2020 |
Winogradoff DN, Aksimentiev A. Unraveling the Nucleosome through Microscopic Simulations Biophysical Journal. 118: 9a. DOI: 10.1016/J.Bpj.2019.11.3371 |
0.324 |
|
| 2020 |
Sobota DK, Joshi H, Ohmann A, Aksimentiev A, Keyser UF. Controlling the Rate and the Level of Interleaflet Lipid Transport with Switchable DNA Nanostructure Biophysical Journal. 118: 163a. DOI: 10.1016/J.Bpj.2019.11.1006 |
0.42 |
|
| 2019 |
Singharoy A, Maffeo C, Delgado-Magnero KH, Swainsbury DJK, Sener M, Kleinekathöfer U, Vant JW, Nguyen J, Hitchcock A, Isralewitz B, Teo I, Chandler DE, Stone JE, Phillips JC, Pogorelov TV, ... ... Aksimentiev A, et al. Atoms to Phenotypes: Molecular Design Principles of Cellular Energy Metabolism. Cell. 179: 1098-1111.e23. PMID 31730852 DOI: 10.1016/J.Cell.2019.10.021 |
0.358 |
|
| 2019 |
Maffeo C, Chou HY, Aksimentiev A. Molecular Mechanisms of DNA Replication and Repair Machinery: Insights from Microscopic Simulations. Advanced Theory and Simulations. 2. PMID 31728433 DOI: 10.1002/adts.201800191 |
0.398 |
|
| 2019 |
Ohmann A, Göpfrich K, Joshi H, Thompson RF, Sobota D, Ranson NA, Aksimentiev A, Keyser UF. Controlling aggregation of cholesterol-modified DNA nanostructures. Nucleic Acids Research. PMID 31642494 DOI: 10.1093/Nar/Gkz914 |
0.537 |
|
| 2019 |
Jepsen MDE, Sørensen RS, Maffeo C, Aksimentiev A, Kjems J, Birkedal V. Single molecule analysis of structural fluctuations in DNA nanostructures. Nanoscale. 11: 18475-18482. PMID 31577314 DOI: 10.1039/C9Nr03826D |
0.533 |
|
| 2019 |
Shankla M, Aksimentiev A. Step-defect guided delivery of DNA to a graphene nanopore. Nature Nanotechnology. PMID 31384038 DOI: 10.1038/S41565-019-0514-Y |
0.441 |
|
| 2019 |
Wilson J, Sarthak K, Si W, Gao L, Aksimentiev A. Rapid and Accurate Determination of Nanopore Ionic Current Using a Steric Exclusion Model. Acs Sensors. PMID 30821441 DOI: 10.1021/Acssensors.8B01375 |
0.382 |
|
| 2019 |
Zhao S, Restrepo-Pérez L, Soskine M, Maglia G, Joo C, Dekker C, Aksimentiev A. Electro-Mechanical Conductance Modulation of a Nanopore Using a Removable Gate. Acs Nano. PMID 30715850 DOI: 10.1021/Acsnano.8B09266 |
0.354 |
|
| 2018 |
Yoo J, Li CY, Slone SM, Maffeo C, Aksimentiev A. Correction to: A Practical Guide to Molecular Dynamics Simulations of DNA Origami Systems. Methods in Molecular Biology (Clifton, N.J.). 1811: E3. PMID 30484170 DOI: 10.1007/978-1-4939-8582-1_23 |
0.642 |
|
| 2018 |
Winogradoff D, Aksimentiev A. Molecular Mechanism of Spontaneous Nucleosome Unraveling. Journal of Molecular Biology. PMID 30468737 DOI: 10.1016/J.Jmb.2018.11.013 |
0.515 |
|
| 2018 |
Arnott PM, Joshi H, Aksimentiev A, Howorka S. Dynamic Interactions between Lipid-Tethered DNA and Phospholipid Membranes. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 30350681 DOI: 10.1021/Acs.Langmuir.8B02271 |
0.557 |
|
| 2018 |
Chowdhury R, Ren T, Shankla M, Decker K, Grisewood M, Prabhakar J, Baker C, Golbeck JH, Aksimentiev A, Kumar M, Maranas CD. PoreDesigner for tuning solute selectivity in a robust and highly permeable outer membrane pore. Nature Communications. 9: 3661. PMID 30202038 DOI: 10.1038/S41467-018-06097-1 |
0.317 |
|
| 2018 |
Shi X, Li Q, Gao R, Si W, Liu SC, Aksimentiev A, Long YT. The Dynamics of a Molecular Plug Docked onto a Solid-State Nanopore. The Journal of Physical Chemistry Letters. PMID 30058336 DOI: 10.1021/Acs.Jpclett.8B01755 |
0.504 |
|
| 2018 |
Kang H, Yoo J, Sohn BK, Lee SW, Lee HS, Ma W, Kee JM, Aksimentiev A, Kim H. Sequence-dependent DNA condensation as a driving force of DNA phase separation. Nucleic Acids Research. PMID 30032232 DOI: 10.1093/Nar/Gky639 |
0.659 |
|
| 2018 |
Wilson J, Aksimentiev A. Water-Compression Gating of Nanopore Transport. Physical Review Letters. 120: 268101. PMID 30004740 DOI: 10.1103/Physrevlett.120.268101 |
0.362 |
|
| 2018 |
Ohmann A, Li CY, Maffeo C, Al Nahas K, Baumann KN, Göpfrich K, Yoo J, Keyser UF, Aksimentiev A. A synthetic enzyme built from DNA flips 10 lipids per second in biological membranes. Nature Communications. 9: 2426. PMID 29930243 DOI: 10.1038/S41467-018-04821-5 |
0.614 |
|
| 2018 |
Yoo J, Li CY, Slone SM, Maffeo C, Aksimentiev A. A Practical Guide to Molecular Dynamics Simulations of DNA Origami Systems. Methods in Molecular Biology (Clifton, N.J.). 1811: 209-229. PMID 29926456 DOI: 10.1007/978-1-4939-8582-1_15 |
0.647 |
|
| 2018 |
Yoo J, Aksimentiev A. New tricks for old dogs: improving the accuracy of biomolecular force fields by pair-specific corrections to non-bonded interactions. Physical Chemistry Chemical Physics : Pccp. PMID 29547221 DOI: 10.1039/C7Cp08185E |
0.575 |
|
| 2018 |
Hemmig EA, Fitzgerald C, Maffeo C, Hecker L, Ochmann SE, Aksimentiev A, Tinnefeld P, Keyser UF. Optical voltage sensing using DNA origami. Nano Letters. PMID 29430924 DOI: 10.1021/Acs.Nanolett.7B05354 |
0.509 |
|
| 2018 |
Ohmann A, Li C, Maffeo C, Al Nahas K, Baumann KN, Göpfrich K, Yoo J, Keyser UF, Aksimentiev A. Outperforming Nature: Synthetic Enzyme Built from DNA Flips Lipids of Biological Membranes at Record Rates Biophysical Journal. 114: 15a. DOI: 10.1016/J.Bpj.2017.11.128 |
0.573 |
|
| 2017 |
Cressiot B, Greive SJ, Si W, Pascoa T, Mojtabavi M, Chechik M, Jenkins HT, Lu X, Zhang K, Aksimentiev A, Antson AA, Wanunu M. Porphyrin-Assisted Docking of a Thermophage Portal Protein into Lipid Bilayers: Nanopore Engineering and Characterization. Acs Nano. PMID 29120602 DOI: 10.1016/J.Bpj.2017.11.3701 |
0.441 |
|
| 2017 |
Maffeo C, Aksimentiev A. Molecular mechanism of DNA association with single-stranded DNA binding protein. Nucleic Acids Research. PMID 29059392 DOI: 10.1093/Nar/Gkx917 |
0.543 |
|
| 2017 |
Wolfe AJ, Si W, Zhang Z, Blanden AR, Hsueh YC, Gugel JF, Pham B, Chen M, Loh SN, Rozovsky S, Aksimentiev A, Movileanu L. Quantification of Membrane Protein-Detergent Complex Interactions. The Journal of Physical Chemistry. B. PMID 29035562 DOI: 10.1021/Acs.Jpcb.7B08045 |
0.358 |
|
| 2017 |
Alibakhshi MA, Halman JR, Wilson J, Aksimentiev A, Afonin KA, Wanunu M. Picomolar Fingerprinting of Nucleic Acid Nanoparticles Using Solid-State Nanopores. Acs Nano. PMID 28841287 DOI: 10.1021/Acsnano.7B04923 |
0.3 |
|
| 2017 |
Restrepo-Pérez L, John S, Aksimentiev A, Joo C, Dekker C. SDS-assisted protein transport through solid-state nanopores. Nanoscale. PMID 28776058 DOI: 10.1039/C7Nr02450A |
0.395 |
|
| 2017 |
Decker K, Page MA, Aksimentiev A. A Nanoscale Ion Pump Derived From a Biological Water Channel. The Journal of Physical Chemistry. B. PMID 28745057 DOI: 10.1021/Acs.Jpcb.7B05568 |
0.346 |
|
| 2017 |
Si W, Aksimentiev A. Nanopore Sensing of Protein Folding. Acs Nano. PMID 28693322 DOI: 10.1021/Acsnano.7B02718 |
0.354 |
|
| 2017 |
Göpfrich K, Li CY, Mames I, Bhamidimarri SP, Ricci M, Yoo J, Mames A, Ohmann A, Winterhalter M, Stulz E, Aksimentiev A, Keyser UF. Correction to Ion Channels Made from a Single Membrane-Spanning DNA Duplex. Nano Letters. PMID 28608698 DOI: 10.1021/Acs.Nanolett.7B02430 |
0.601 |
|
| 2017 |
Decker K, Page M, Boyd A, MacAllister I, Ginsberg M, Aksimentiev A. Selective Permeability of Truncated Aquaporin 1 in Silico Acs Biomaterials Science & Engineering. 3: 342-348. DOI: 10.1021/Acsbiomaterials.6B00583 |
0.36 |
|
| 2017 |
Winogradoff D, Aksimentiev A. The Molecular Mechanism of Nucleosome Breathing Biophysical Journal. 112: 371a. DOI: 10.1016/J.Bpj.2016.11.2014 |
0.303 |
|
| 2017 |
Restrepo-Perez L, Soskine M, John S, Aksimentiev A, Maglia G, Joo C, Dekker C. Single-Molecule Protein Fingerprinting with Nanopores Biophysical Journal. 112: 330a. DOI: 10.1016/J.Bpj.2016.11.1789 |
0.351 |
|
| 2017 |
Si W, Aksimentiev A. Nanopore Ionic Current can Report on the Folding State of a Protein Biophysical Journal. 112: 195a. DOI: 10.1016/J.Bpj.2016.11.1083 |
0.387 |
|
| 2017 |
Yoo J, Park S, Kim H, Ha T, Aksimentiev A. High Throughput Simulations Reveal how Sequence and Methylation Control DNA Looping and Self-Association Biophysical Journal. 112: 6a. DOI: 10.1016/J.Bpj.2016.11.053 |
0.648 |
|
| 2016 |
Tian K, Decker K, Aksimentiev A, Gu LQ. Interference-Free Detection of Genetic Biomarkers Using Synthetic Dipole-Facilitated Nanopore Dielectrophoresis. Acs Nano. PMID 28036167 DOI: 10.1021/Acsnano.6B07570 |
0.399 |
|
| 2016 |
Shankla M, Aksimentiev A. Modulation of Molecular Flux Using a Graphene Nanopore Capacitor. The Journal of Physical Chemistry. B. PMID 28009170 DOI: 10.1021/Acs.Jpcb.6B10574 |
0.361 |
|
| 2016 |
Pud S, Chao SH, Belkin M, Verschueren D, Huijben T, van Engelenburg C, Dekker C, Aksimentiev A. Mechanical Trapping of DNA in a Double-Nanopore System. Nano Letters. 16: 8021-8028. PMID 27960493 DOI: 10.1021/Acs.Nanolett.6B04642 |
0.578 |
|
| 2016 |
Wilson J, Sloman L, He Z, Aksimentiev A. Graphene Nanopores for Protein Sequencing. Advanced Functional Materials. 26: 4830-4838. PMID 27746710 DOI: 10.1002/Adfm.201601272 |
0.354 |
|
| 2016 |
Yoo J, Aksimentiev A. Refined Parameterization of Non-Bonded Interactions Improves Conformational Sampling and Kinetics of Protein Folding Simulations. The Journal of Physical Chemistry Letters. PMID 27617340 DOI: 10.1021/Acs.Jpclett.6B01747 |
0.528 |
|
| 2016 |
Göpfrich K, Li CY, Ricci M, Bhamidimarri SP, Yoo J, Gyenes B, Ohmann A, Winterhalter M, Aksimentiev A, Keyser UF. Large-Conductance Transmembrane Porin Made from DNA Origami. Acs Nano. PMID 27504755 DOI: 10.1021/Acsnano.6B03759 |
0.664 |
|
| 2016 |
Göpfrich K, Li CY, Mames I, Bhamidimarri SP, Ricci M, Yoo J, Mames A, Ohmann A, Winterhalter M, Stulz E, Aksimentiev A, Keyser UF. Ion channels made from a single membrane-spanning DNA duplex. Nano Letters. PMID 27324157 DOI: 10.1021/Acs.Nanolett.6B02039 |
0.61 |
|
| 2016 |
Yoo J, Wilson J, Aksimentiev A. Improved model of hydrated calcium ion for molecular dynamics simulations using classical biomolecular force fields. Biopolymers. PMID 27144470 DOI: 10.1002/Bip.22868 |
0.602 |
|
| 2016 |
Comer J, Aksimentiev A. DNA sequence-dependent ionic currents in ultra-small solid-state nanopores. Nanoscale. PMID 27103233 DOI: 10.1039/C6Nr01061J |
0.457 |
|
| 2016 |
Bhattacharya S, Yoo J, Aksimentiev A. Water Mediates Recognition of DNA Sequence via Ionic Current Blockade in a Biological Nanopore. Acs Nano. PMID 27054820 DOI: 10.1021/Acsnano.6B00940 |
0.67 |
|
| 2016 |
Sun L, Tabaka M, Hou S, Li L, Burdzy K, Aksimentiev A, Maffeo C, Zhang X, Holyst R. The Hinge Region Strengthens the Nonspecific Interaction between Lac-Repressor and DNA: A Computer Simulation Study. Plos One. 11: e0152002. PMID 27008630 DOI: 10.1371/Journal.Pone.0152002 |
0.515 |
|
| 2016 |
Yoo J, Kim H, Aksimentiev A, Ha T. Direct evidence for sequence-dependent attraction between double-stranded DNA controlled by methylation. Nature Communications. 7: 11045. PMID 27001929 DOI: 10.1038/Ncomms11045 |
0.663 |
|
| 2016 |
Maffeo C, Yoo J, Aksimentiev A. De novo reconstruction of DNA origami structures through atomistic molecular dynamics simulation. Nucleic Acids Research. PMID 26980283 DOI: 10.1093/Nar/Gkw155 |
0.642 |
|
| 2016 |
Belkin M, Aksimentiev A. Molecular Dynamics Simulation of DNA Capture and Transport in Heated Nanopores. Acs Applied Materials & Interfaces. PMID 26963065 DOI: 10.1021/Acsami.6B00463 |
0.53 |
|
| 2016 |
Ngo TT, Yoo J, Dai Q, Zhang Q, He C, Aksimentiev A, Ha T. Effects of cytosine modifications on DNA flexibility and nucleosome mechanical stability. Nature Communications. 7: 10813. PMID 26905257 DOI: 10.1038/Ncomms10813 |
0.653 |
|
| 2016 |
Yoo J, Aksimentiev A. The structure and intermolecular forces of DNA condensates. Nucleic Acids Research. PMID 26883635 DOI: 10.1093/Nar/Gkw081 |
0.682 |
|
| 2016 |
Slone SM, Li CY, Yoo J, Aksimentiev A. Molecular mechanics of DNA bricks: In situ structure, mechanical properties and ionic conductivity New Journal of Physics. 18. DOI: 10.1088/1367-2630/18/5/055012 |
0.665 |
|
| 2016 |
Yoo J, Li C, Aksimentiev A. Membrane-Spanning DNA Ion Channels: Conductance Mechanism, Electro-Osmotic Transport and Mechanical Gating Biophysical Journal. 110: 119a. DOI: 10.1016/J.Bpj.2015.11.694 |
0.527 |
|
| 2016 |
Yoo J, Aksimentiev A. Improved Parameterization of Amine-Carboxyate, Amine-Phosphate, and Aliphatic Carbon-Carbon Interactions for Molecular Dynamics Simulations using the Charmm and Amber Force Fields Biophysical Journal. 110: 646a. DOI: 10.1016/J.Bpj.2015.11.3457 |
0.586 |
|
| 2016 |
Yoo J, Kim H, Ha T, Aksimentiev A. Effector-Free Molecular Mechanism of Epigenetic Regulation Revealed by Molecular Dynamics Simulations and Single-Molecule FRET Experiments Biophysical Journal. 110: 561a-562a. DOI: 10.1016/J.Bpj.2015.11.3003 |
0.638 |
|
| 2016 |
Tian K, Decker K, Aksimentiev A, Gu L. Microcarrier-Guided Nanopore Dielectrophoresis for Selective Nucleic Acid Detection Biophysical Journal. 110: 502a. DOI: 10.1016/J.Bpj.2015.11.2683 |
0.431 |
|
| 2015 |
Yoo J, Aksimentiev A. Improved Parameterization of Amine-Carboxylate and Amine-Phosphate Interactions for Molecular Dynamics Simulations Using the CHARMM and AMBER Force Fields. Journal of Chemical Theory and Computation. PMID 26632962 DOI: 10.1021/Acs.Jctc.5B00967 |
0.569 |
|
| 2015 |
Carson S, Wilson J, Aksimentiev A, Weigele PR, Wanunu M. Hydroxymethyluracil modifications enhance the flexibility and hydrophilicity of double-stranded DNA. Nucleic Acids Research. PMID 26578595 DOI: 10.1093/Nar/Gkv1199 |
0.572 |
|
| 2015 |
Yoo J, Aksimentiev A. Molecular Dynamics of Membrane-Spanning DNA Channels: Conductance Mechanism, Electro-Osmotic Transport and Mechanical Gating. The Journal of Physical Chemistry Letters. PMID 26551518 DOI: 10.1021/Acs.Jpclett.5B01964 |
0.634 |
|
| 2015 |
Belkin M, Chao SH, Jonsson MP, Dekker C, Aksimentiev A. Plasmonic Nanopores for Trapping, Controlling Displacement and Sequencing of DNA Molecules. Acs Nano. PMID 26401685 DOI: 10.1021/Acsnano.5B04173 |
0.535 |
|
| 2015 |
Banerjee S, Wilson J, Shim J, Shankla M, Corbin EA, Aksimentiev A, Bashir R. Slowing DNA Transport Using Graphene-DNA Interactions. Advanced Functional Materials. 25: 936-946. PMID 26167144 DOI: 10.1002/Adfm.201403719 |
0.394 |
|
| 2015 |
Li CY, Hemmig EA, Kong J, Yoo J, Hernández-Ainsa S, Keyser UF, Aksimentiev A. Ionic conductivity, structural deformation, and programmable anisotropy of DNA origami in electric field. Acs Nano. 9: 1420-33. PMID 25623807 DOI: 10.1021/Nn505825Z |
0.668 |
|
| 2014 |
Gamble T, Decker K, Plett TS, Pevarnik M, Pietschmann JF, Vlassiouk I, Aksimentiev A, Siwy ZS. Rectification of Ion Current in Nanopores Depends on the Type of Monovalent Cations: Experiments and Modeling. The Journal of Physical Chemistry. C, Nanomaterials and Interfaces. 118: 9809-9819. PMID 25678940 DOI: 10.1021/Jp501492G |
0.338 |
|
| 2014 |
Carson S, Wilson J, Aksimentiev A, Wanunu M. Smooth DNA transport through a narrowed pore geometry. Biophysical Journal. 107: 2381-93. PMID 25418307 DOI: 10.1016/J.Bpj.2014.10.017 |
0.496 |
|
| 2014 |
Belkin M, Chao SH, Giannetti G, Aksimentiev A. Modeling thermophoretic effects in solid-state nanopores. Journal of Computational Electronics. 13: 826-838. PMID 25395899 DOI: 10.1007/S10825-014-0594-8 |
0.426 |
|
| 2014 |
Shankla M, Aksimentiev A. Conformational transitions and stop-and-go nanopore transport of single-stranded DNA on charged graphene. Nature Communications. 5: 5171. PMID 25296960 DOI: 10.1038/Ncomms6171 |
0.453 |
|
| 2014 |
Maffeo C, Yoo J, Comer J, Wells DB, Luan B, Aksimentiev A. Close encounters with DNA. Journal of Physics. Condensed Matter : An Institute of Physics Journal. 26: 413101. PMID 25238560 DOI: 10.1088/0953-8984/26/41/413101 |
0.645 |
|
| 2014 |
Maffeo C, Ngo TT, Ha T, Aksimentiev A. A Coarse-Grained Model of Unstructured Single-Stranded DNA Derived from Atomistic Simulation and Single-Molecule Experiment. Journal of Chemical Theory and Computation. 10: 2891-2896. PMID 25136266 DOI: 10.1021/Ct500193U |
0.548 |
|
| 2014 |
Chao SH, Matthews SS, Paxman R, Aksimentiev A, Gruebele M, Price JL. Two structural scenarios for protein stabilization by PEG. The Journal of Physical Chemistry. B. 118: 8388-95. PMID 24821319 DOI: 10.1021/Jp502234S |
0.32 |
|
| 2014 |
Chaudhry JH, Comer J, Aksimentiev A, Olson LN. A Stabilized Finite Element Method for Modified Poisson-Nernst-Planck Equations to Determine Ion Flow Through a Nanopore. Communications in Computational Physics. 15. PMID 24363784 DOI: 10.4208/Cicp.101112.100413A |
0.313 |
|
| 2014 |
Yoo J, Aksimentiev A. The Physics of DNA in Confinement Biophysical Journal. 106: 76a. DOI: 10.1016/J.Bpj.2013.11.496 |
0.69 |
|
| 2014 |
Kim H, Yoo J, Aksimentiev A, Ha T. ‘At’ Content as a Determinant of the Chromosome Structure Biophysical Journal. 106: 694a. DOI: 10.1016/J.Bpj.2013.11.3840 |
0.617 |
|
| 2014 |
Chao S, Price J, Aksimentiev A, Gruebele M. How Pegylation Stabilizes a Protein Biophysical Journal. 106: 667a. DOI: 10.1016/J.Bpj.2013.11.3693 |
0.321 |
|
| 2014 |
Li C, Yoo J, Aksimentiev A. Ion Conductivity, Structural Dynamics and the Effective Force in DNA Origami Nanopores Biophysical Journal. 106: 414a. DOI: 10.1016/J.Bpj.2013.11.2331 |
0.706 |
|
| 2014 |
Gamble TP, Pietschmann JF, Decker K, Aksimentiev A, Siwy Z. Binding of Alkali Metals to Pore Walls in Nanopores Modulates Transmembrane Ion Current and Ionic Rectification Biophysical Journal. 106: 215a. DOI: 10.1016/J.Bpj.2013.11.1260 |
0.337 |
|
| 2013 |
Yoo J, Aksimentiev A. In situ structure and dynamics of DNA origami determined through molecular dynamics simulations. Proceedings of the National Academy of Sciences of the United States of America. 110: 20099-104. PMID 24277840 DOI: 10.1073/Pnas.1316521110 |
0.663 |
|
| 2013 |
Belkin M, Maffeo C, Wells DB, Aksimentiev A. Stretching and controlled motion of single-stranded DNA in locally heated solid-state nanopores. Acs Nano. 7: 6816-24. PMID 23876013 DOI: 10.1021/Nn403575N |
0.507 |
|
| 2013 |
Timp W, Comer J, Aksimentiev A. Nanopore Sequencing using a Hidden Markov Model for Base-Calling Biophysical Journal. 104: 211a. DOI: 10.1016/J.Bpj.2012.11.1195 |
0.443 |
|
| 2012 |
Comer J, Ho A, Aksimentiev A. Toward detection of DNA-bound proteins using solid-state nanopores: insights from computer simulations. Electrophoresis. 33: 3466-79. PMID 23147918 DOI: 10.1002/Elps.201200164 |
0.562 |
|
| 2012 |
Maffeo C, Bhattacharya S, Yoo J, Wells D, Aksimentiev A. Modeling and simulation of ion channels. Chemical Reviews. 112: 6250-84. PMID 23035940 DOI: 10.1021/Cr3002609 |
0.516 |
|
| 2012 |
Yoo J, Aksimentiev A. Competitive binding of cations to duplex DNA revealed through molecular dynamics simulations. The Journal of Physical Chemistry. B. 116: 12946-54. PMID 23016894 DOI: 10.1021/Jp306598Y |
0.635 |
|
| 2012 |
Wells DB, Belkin M, Comer J, Aksimentiev A. Assessing graphene nanopores for sequencing DNA. Nano Letters. 12: 4117-23. PMID 22780094 DOI: 10.1021/Nl301655D |
0.512 |
|
| 2012 |
Bhattacharya S, Derrington IM, Pavlenok M, Niederweis M, Gundlach JH, Aksimentiev A. Molecular dynamics study of MspA arginine mutants predicts slow DNA translocations and ion current blockades indicative of DNA sequence. Acs Nano. 6: 6960-8. PMID 22747101 DOI: 10.1021/Nn3019943 |
0.557 |
|
| 2012 |
Timp W, Comer J, Aksimentiev A. DNA base-calling from a nanopore using a Viterbi algorithm. Biophysical Journal. 102: L37-9. PMID 22677395 DOI: 10.1016/J.Bpj.2012.04.009 |
0.411 |
|
| 2012 |
Comer J, Aksimentiev A. Predicting the DNA sequence dependence of nanopore ion current using atomic-resolution Brownian dynamics. The Journal of Physical Chemistry. C, Nanomaterials and Interfaces. 116: 3376-3393. PMID 22606364 DOI: 10.1021/Jp210641J |
0.511 |
|
| 2012 |
Wells DB, Bhattacharya S, Carr R, Maffeo C, Ho A, Comer J, Aksimentiev A. Optimization of the molecular dynamics method for simulations of DNA and ion transport through biological nanopores. Methods in Molecular Biology (Clifton, N.J.). 870: 165-86. PMID 22528264 DOI: 10.1007/978-1-61779-773-6_10 |
0.499 |
|
| 2012 |
Maffeo C, Luan B, Aksimentiev A. End-to-end attraction of duplex DNA. Nucleic Acids Research. 40: 3812-21. PMID 22241779 DOI: 10.1093/Nar/Gkr1220 |
0.516 |
|
| 2012 |
Kowalczyk SW, Wells DB, Aksimentiev A, Dekker C. Slowing down DNA translocation through a nanopore in lithium chloride. Nano Letters. 12: 1038-44. PMID 22229707 DOI: 10.1021/Nl204273H |
0.566 |
|
| 2012 |
Yoo J, Aksimentiev A. Improved parametrization of Li +, Na +, K +, and Mg 2+ ions for all-atom molecular dynamics simulations of nucleic acid systems Journal of Physical Chemistry Letters. 3: 45-50. DOI: 10.1021/Jz201501A |
0.66 |
|
| 2012 |
Yoo J, Aksimentiev A. Improved Parametrization of Ion-DNA Interactions for MD Simulations of Dense DNA Systems Biophysical Journal. 102: 637a. DOI: 10.1016/J.Bpj.2011.11.3468 |
0.664 |
|
| 2011 |
Carr R, Comer J, Ginsberg MD, Aksimentiev A. Modeling Pressure-Driven Transport of Proteins through a Nanochannel. Ieee Transactions On Nanotechnology. 10: 75-82. PMID 22611338 DOI: 10.1109/Tnano.2010.2062530 |
0.333 |
|
| 2011 |
Carr R, Comer J, Ginsberg MD, Aksimentiev A. Atoms-to-microns model for small solute transport through sticky nanochannels. Lab On a Chip. 11: 3766-73. PMID 21986816 DOI: 10.1039/C1Lc20697D |
0.331 |
|
| 2011 |
Bhattacharya S, Muzard L, Payet L, Mathé J, Bockelmann U, Aksimentiev A, Viasnoff V. Rectification of the current in alpha-hemolysin pore depends on the cation type: the alkali series probed by MD simulations and experiments. The Journal of Physical Chemistry. C, Nanomaterials and Interfaces. 115: 4255-4264. PMID 21860669 DOI: 10.1021/Jp111441P |
0.36 |
|
| 2011 |
Comer JR, Wells DB, Aksimentiev A. Modeling nanopores for sequencing DNA. Methods in Molecular Biology (Clifton, N.J.). 749: 317-58. PMID 21674382 DOI: 10.1007/978-1-61779-142-0_22 |
0.521 |
|
| 2011 |
Venkatesan BM, Polans J, Comer J, Sridhar S, Wendell D, Aksimentiev A, Bashir R. Lipid bilayer coated Al(2)O(3) nanopore sensors: towards a hybrid biological solid-state nanopore. Biomedical Microdevices. 13: 671-82. PMID 21487665 DOI: 10.1007/S10544-011-9537-3 |
0.373 |
|
| 2011 |
Wang D, Shim J, Timp WG, Ho A, Aksimentiev A, Timp G. Using Measurements of the ion Current Through a Synthetic Nanopore to Discriminate Nucleotides in a Single DNA Molecule Biophysical Journal. 100: 521a. DOI: 10.1016/J.Bpj.2010.12.3047 |
0.513 |
|
| 2011 |
Aksimentiev A, Bhattacharya S, Ho A. Engineering Biological Nanopore MspA for Sequencing DNA Biophysical Journal. 100: 168a. DOI: 10.1016/J.Bpj.2010.12.1138 |
0.569 |
|
| 2010 |
Timp W, Mirsaidov UM, Wang D, Comer J, Aksimentiev A, Timp G. Nanopore Sequencing: Electrical Measurements of the Code of Life. Ieee Transactions On Nanotechnology. 9: 281-294. PMID 21572978 DOI: 10.1109/Tnano.2010.2044418 |
0.467 |
|
| 2010 |
Luan B, Aksimentiev A. Control and reversal of the electrophoretic force on DNA in a charged nanopore. Journal of Physics. Condensed Matter : An Institute of Physics Journal. 22: 454123. PMID 21339610 DOI: 10.1088/0953-8984/22/45/454123 |
0.527 |
|
| 2010 |
Maffeo C, Schöpflin R, Brutzer H, Stehr R, Aksimentiev A, Wedemann G, Seidel R. DNA-DNA interactions in tight supercoils are described by a small effective charge density. Physical Review Letters. 105: 158101. PMID 21230940 DOI: 10.1103/Physrevlett.105.158101 |
0.542 |
|
| 2010 |
Mirsaidov U, Comer J, Dimitrov V, Aksimentiev A, Timp G. Slowing the translocation of double-stranded DNA using a nanopore smaller than the double helix. Nanotechnology. 21: 395501. PMID 20808032 DOI: 10.1088/0957-4484/21/39/395501 |
0.509 |
|
| 2010 |
Maffeo C, Aksimentiev A. Single molecule force measurements: insights from molecular simulations. Comment on "Biophysical characterization of DNA binding from single molecule force measurements" by Kathy R. Chaurasiya et al. Physics of Life Reviews. 7: 353-4; discussion 35. PMID 20673653 DOI: 10.1016/J.Plrev.2010.07.004 |
0.401 |
|
| 2010 |
Aksimentiev A. Deciphering ionic current signatures of DNA transport through a nanopore. Nanoscale. 2: 468-83. PMID 20644747 DOI: 10.1039/B9Nr00275H |
0.5 |
|
| 2010 |
Wells DB, Aksimentiev A. Mechanical properties of a complete microtubule revealed through molecular dynamics simulation. Biophysical Journal. 99: 629-37. PMID 20643083 DOI: 10.1016/J.Bpj.2010.04.038 |
0.364 |
|
| 2010 |
Luan B, Aksimentiev A. Electric and Electrophoretic Inversion of the DNA Charge in Multivalent Electrolytes. Soft Matter. 6: 243-246. PMID 20563230 DOI: 10.1039/B917973A |
0.505 |
|
| 2010 |
Wang D, Timp W, Shim JW, Mirsaidov U, Comer J, Aksimentiev A, Timp G. Discriminating Bases by Stretching Double-Stranded DNA in a Nanopore Biophysical Journal. 98: 599a. DOI: 10.1016/J.Bpj.2009.12.3259 |
0.48 |
|
| 2009 |
Cruz-Chu ER, Aksimentiev A, Schulten K. Ionic Current Rectification Through Silica Nanopores. The Journal of Physical Chemistry. C, Nanomaterials and Interfaces. 113: 1850. PMID 20126282 DOI: 10.1021/Jp804724P |
0.352 |
|
| 2009 |
Maffeo C, Aksimentiev A. Structure, dynamics, and ion conductance of the phospholamban pentamer. Biophysical Journal. 96: 4853-65. PMID 19527644 DOI: 10.1016/J.Bpj.2009.03.053 |
0.409 |
|
| 2009 |
Dorvel B, Sigalov G, Zhao Q, Comer J, Dimitrov V, Mirsaidov U, Aksimentiev A, Timp G. Analyzing the forces binding a restriction endonuclease to DNA using a synthetic nanopore Nucleic Acids Research. 37: 4170-4179. PMID 19433506 DOI: 10.1093/Nar/Gkp317 |
0.501 |
|
| 2009 |
Comer J, Dimitrov V, Zhao Q, Timp G, Aksimentiev A. Microscopic mechanics of hairpin DNA translocation through synthetic nanopores. Biophysical Journal. 96: 593-608. PMID 19167307 DOI: 10.1016/J.Bpj.2008.09.023 |
0.571 |
|
| 2009 |
Luan B, Aksimentiev A. Effect of Valence and Concentration of Counterions on Electrophoretic Mobility of DNA in a Solid-State Nanopore Biophysical Journal. 96: 648a. DOI: 10.1016/J.Bpj.2008.12.3854 |
0.56 |
|
| 2009 |
Luan B, Aksimentiev A. Side-by-side And End-to-end Attraction Of Double-stranded DNA Biophysical Journal. 96: 578a. DOI: 10.1016/J.Bpj.2008.12.3020 |
0.573 |
|
| 2009 |
Wells DB, Aksimentiev A. Mechanical properties of a complete microtubule from all-atom Molecular Dynamics simulation Biophysical Journal. 96: 506a. DOI: 10.1016/J.Bpj.2008.12.2607 |
0.36 |
|
| 2008 |
Aksimentiev A, Brunner R, Cohen J, Comer J, Cruz-Chu E, Hardy D, Rajan A, Shih A, Sigalov G, Yin Y, Schulten K. Computer modeling in biotechnology: a partner in development. Methods in Molecular Biology (Clifton, N.J.). 474: 181-234. PMID 19031067 DOI: 10.1007/978-1-59745-480-3_11 |
0.346 |
|
| 2008 |
Luan B, Aksimentiev A. DNA attraction in monovalent and divalent electrolytes. Journal of the American Chemical Society. 130: 15754-5. PMID 18975864 DOI: 10.1021/Ja804802U |
0.565 |
|
| 2008 |
Luan B, Aksimentiev A. Strain softening in stretched DNA. Physical Review Letters. 101: 118101. PMID 18851334 DOI: 10.1103/Physrevlett.101.118101 |
0.535 |
|
| 2008 |
Luan B, Aksimentiev A. Electro-osmotic screening of the DNA charge in a nanopore. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 78: 021912. PMID 18850870 DOI: 10.1103/Physreve.78.021912 |
0.516 |
|
| 2008 |
Carr R, Weinstock IA, Sivaprasadarao A, Müller A, Aksimentiev A. Synthetic ion channels via self-assembly: A route for embedding porous polyoxometalate nanocapsules in lipid bilayer membranes Nano Letters. 8: 3916-3921. PMID 18844424 DOI: 10.1021/Nl802366K |
0.347 |
|
| 2008 |
Zhao Q, Comer J, Dimitrov V, Yemenicioglu S, Aksimentiev A, Timp G. Stretching and unzipping nucleic acid hairpins using a synthetic nanopore Nucleic Acids Research. 36: 1532-1541. PMID 18208842 DOI: 10.1093/Nar/Gkm1017 |
0.468 |
|
| 2008 |
Cherezov V, Liu W, Derrick JP, Luan B, Aksimentiev A, Katritch V, Caffrey M. In meso crystal structure and docking simulations suggest an alternative proteoglycan binding site in the OpcA outer membrane adhesin. Proteins. 71: 24-34. PMID 18076035 DOI: 10.1002/Prot.21841 |
0.326 |
|
| 2008 |
Sigalov G, Comer J, Timp G, Aksimentiev A. Detection of DNA sequences using an alternating electric field in a nanopore capacitor. Nano Letters. 8: 56-63. PMID 18069865 DOI: 10.1021/Nl071890K |
0.525 |
|
| 2007 |
Luan B, Caffrey M, Aksimentiev A. Structure refinement of the OpcA adhesin using molecular dynamics. Biophysical Journal. 93: 3058-69. PMID 17938421 DOI: 10.1529/Biophysj.107.106724 |
0.331 |
|
| 2007 |
Wells DB, Abramkina V, Aksimentiev A. Exploring transmembrane transport through alpha-hemolysin with grid-steered molecular dynamics. The Journal of Chemical Physics. 127: 125101. PMID 17902937 DOI: 10.1063/1.2770738 |
0.48 |
|
| 2006 |
Cruz-Chu ER, Aksimentiev A, Schulten K. Water-silica force field for simulating nanodevices. The Journal of Physical Chemistry. B. 110: 21497-508. PMID 17064100 DOI: 10.1021/Jp063896O |
0.325 |
|
| 2006 |
Lu D, Aksimentiev A, Shih AY, Cruz-Chu E, Freddolino PL, Arkhipov A, Schulten K. The role of molecular modeling in bionanotechnology. Physical Biology. 3: S40-53. PMID 16582464 DOI: 10.1088/1478-3975/3/1/S05 |
0.413 |
|
| 2006 |
Heng JB, Aksimentiev A, Ho C, Marks P, Grinkova YV, Sligar S, Schulten K, Timp G. The electromechanics of DNA in a synthetic nanopore. Biophysical Journal. 90: 1098-106. PMID 16284270 DOI: 10.1529/Biophysj.105.070672 |
0.367 |
|
| 2006 |
Dimitrov V, Aksimentiev A, Schulten K, Heng J, Sorsch T, Mansfield W, Miner J, Watson GP, Cirelli R, Klemens F, Bower J, Ferry E, Taylor A, Kornblit A, Dorvel B, et al. Exploring the prospects for a nanometer-scale gene chip Technical Digest - International Electron Devices Meeting, Iedm. DOI: 10.1109/IEDM.2006.346987 |
0.357 |
|
| 2006 |
Gracheva ME, Xiong A, Aksimentiev A, Schulten K, Timp G, Leburton JP. Simulation of the electric response of DNA translocation through a semiconductor nanopore-capacitor Nanotechnology. 17: 622-633. DOI: 10.1088/0957-4484/17/3/002 |
0.496 |
|
| 2006 |
Gracheva ME, Aksimentiev A, Leburton JP. Electrical signatures of single-stranded DNA with single base mutations in a nanopore capacitor Nanotechnology. 17: 3160-3165. DOI: 10.1088/0957-4484/17/13/014 |
0.456 |
|
| 2005 |
Heng JB, Aksimentiev A, Ho C, Dimitrov V, Sorsch T, Miner J, Mansfield W, Schulten K, Timp G. Beyond the Gene Chip. Bell Labs Technical Journal. 10: 5-22. PMID 18815623 DOI: 10.1002/Bltj.20102 |
0.459 |
|
| 2005 |
Heng JB, Aksimentiev A, Ho C, Marks P, Grinkova YV, Sligar S, Schulten K, Timp G. Stretching DNA using the electric field in a synthetic nanopore. Nano Letters. 5: 1883-8. PMID 16218703 DOI: 10.1021/Nl0510816 |
0.512 |
|
| 2005 |
Mathé J, Aksimentiev A, Nelson DR, Schulten K, Meller A. Orientation discrimination of single-stranded DNA inside the alpha-hemolysin membrane channel. Proceedings of the National Academy of Sciences of the United States of America. 102: 12377-82. PMID 16113083 DOI: 10.1073/Pnas.0502947102 |
0.564 |
|
| 2004 |
Aksimentiev A, Heng JB, Timp G, Schulten K. Microscopic Kinetics of DNA Translocation through synthetic nanopores. Biophysical Journal. 87: 2086-97. PMID 15345583 DOI: 10.1529/Biophysj.104.042960 |
0.506 |
|
| 2004 |
Heng JB, Ho C, Kim T, Timp R, Aksimentiev A, Grinkova YV, Sligar S, Schulten K, Timp G. Sizing DNA using a nanometer-diameter pore. Biophysical Journal. 87: 2905-11. PMID 15326034 DOI: 10.1529/Biophysj.104.041814 |
0.465 |
|
| 2004 |
Aksimentiev A, Schulten K. Extending molecular modeling methodology to study insertion of membrane nanopores Proceedings of the National Academy of Sciences of the United States of America. 101: 4337-4338. PMID 15070717 DOI: 10.1073/Pnas.0400739101 |
0.325 |
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