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Jack P. Wang, Ph.D. - Publications

Affiliations: 
2012 North Carolina State University, Raleigh, NC 
Area:
Wood Technology Agriculture, Alternative Energy
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43 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Li W, Jimmy Lin YC, Chen YL, Zhou C, Li S, De Ridder N, Oliveira DM, Zhang L, Zhang B, Wang JP, Xu C, Fu X, Luo K, Wu AM, Demura T, et al. Woody Plant Cell Walls: Fundamental and Utilization. Molecular Plant. PMID 38102833 DOI: 10.1016/j.molp.2023.12.008  0.518
2023 Sulis DB, Jiang X, Yang C, Marques BM, Matthews ML, Miller Z, Lan K, Cofre-Vega C, Liu B, Sun R, Sederoff H, Bing RG, Sun X, Williams CM, Jameel H, ... ... Wang JP, et al. Multiplex CRISPR editing of wood for sustainable fiber production. Science (New York, N.Y.). 381: 216-221. PMID 37440632 DOI: 10.1126/science.add4514  0.495
2023 Dai X, Zhai R, Lin J, Wang Z, Meng D, Li M, Mao Y, Gao B, Ma H, Zhang B, Sun Y, Li S, Zhou C, Lin YJ, Wang JP, et al. Cell-type-specific PtrWOX4a and PtrVCS2 form a regulatory nexus with a histone modification system for stem cambium development in Populus trichocarpa. Nature Plants. PMID 36624255 DOI: 10.1038/s41477-022-01315-7  0.571
2022 Chen H, Neubauer M, Wang JP. Enhancing HR Frequency for Precise Genome Editing in Plants. Frontiers in Plant Science. 13: 883421. PMID 35592579 DOI: 10.3389/fpls.2022.883421  0.303
2022 Liu H, Gao J, Sun J, Li S, Zhang B, Wang Z, Zhou C, Sulis DB, Wang JP, Chiang VL, Li W. Dimerization of PtrMYB074 and PtrWRKY19 mediates transcriptional activation of PtrbHLH186 for secondary xylem development in Populus trichocarpa. The New Phytologist. PMID 35152419 DOI: 10.1111/nph.18028  0.565
2022 Yu J, Zhou C, Li D, Li S, Jimmy Lin YC, Wang JP, Chiang VL, Li W. A PtrLBD39-mediated transcriptional network regulates tension wood formation in . Plant Communications. 3: 100250. PMID 35059630 DOI: 10.1016/j.xplc.2021.100250  0.566
2021 Lin CY, Sun Y, Song J, Chen HC, Shi R, Yang C, Liu J, Tunlaya-Anukit S, Liu B, Loziuk PL, Williams CM, Muddiman DC, Lin YJ, Sederoff RR, Wang JP, et al. Enzyme Complexes of Ptr4CL and PtrHCT Modulate Co-enzyme A Ligation of Hydroxycinnamic Acids for Monolignol Biosynthesis in . Frontiers in Plant Science. 12: 727932. PMID 34691108 DOI: 10.3389/fpls.2021.727932  0.684
2021 de Vries L, Brouckaert M, Chanoca A, Kim H, Regner MR, Timokhin VI, Sun Y, De Meester B, Van Doorsselaere J, Goeminne G, Chiang VL, Wang JP, Ralph J, Morreel K, Vanholme R, et al. CRISPR-Cas9 Editing of CAFFEOYL SHIKIMATE ESTERASE 1 and 2 Shows Their Importance and Partial Redundancy in Lignification in Populus tremula x P. alba. Plant Biotechnology Journal. PMID 34160888 DOI: 10.1111/pbi.13651  0.576
2021 Liu B, Liu J, Yu J, Wang Z, Sun Y, Li S, Lin YJ, Chiang VL, Li W, Wang JP. Transcriptional Reprogramming of Xylem Cell Wall Biosynthesis in Tension Wood. Plant Physiology. PMID 33793955 DOI: 10.1093/plphys/kiab038  0.555
2021 Matthews ML, Wang JP, Sederoff R, Chiang VL, Williams CM. A multiscale model of lignin biosynthesis for predicting bioenergy traits in . Computational and Structural Biotechnology Journal. 19: 168-182. PMID 33425249 DOI: 10.1016/j.csbj.2020.11.046  0.566
2020 Wang Z, Mao Y, Guo Y, Gao J, Liu X, Li S, Lin YJ, Chen H, Wang JP, Chiang VL, Li W. MYB transcription factor 161 mediates feedback regulation of Secondary wall-associated NAC-Domain 1 family genes for wood formation. Plant Physiology. PMID 32943464 DOI: 10.1104/Pp.20.01033  0.634
2020 Sulis DB, Wang JP. Regulation of Lignin Biosynthesis by Post-translational Protein Modifications. Frontiers in Plant Science. 11: 914. PMID 32714349 DOI: 10.3389/Fpls.2020.00914  0.408
2020 Matthews ML, Wang JP, Sederoff R, Chiang VL, Williams CM. Modeling cross-regulatory influences on monolignol transcripts and proteins under single and combinatorial gene knockdowns in Populus trichocarpa. Plos Computational Biology. 16: e1007197. PMID 32275650 DOI: 10.1371/Journal.Pcbi.1007197  0.614
2020 Straub CT, Bing RG, Wang JP, Chiang VL, Adams MWW, Kelly RM. Use of the lignocellulose-degrading bacterium to assess recalcitrance and conversion of wild-type and transgenic poplar. Biotechnology For Biofuels. 13: 43. PMID 32180826 DOI: 10.1186/S13068-020-01675-2  0.55
2020 Kim H, Li Q, Karlen SD, Smith RA, Shi R, Liu J, Yang C, Tunlaya-Anukit S, Wang JP, Chang H, Sederoff RR, Ralph J, Chiang VL. Monolignol Benzoates Incorporate into the Lignin of Transgenic Populus trichocarpa Depleted in C3H and C4H Acs Sustainable Chemistry & Engineering. 8: 3644-3654. DOI: 10.1021/Acssuschemeng.9B06389  0.525
2019 Straub CT, Khatibi PA, Wang JP, Conway JM, Williams-Rhaesa AM, Peszlen IM, Chiang VL, Adams MWW, Kelly RM. Quantitative fermentation of unpretreated transgenic poplar by Caldicellulosiruptor bescii. Nature Communications. 10: 3548. PMID 31391460 DOI: 10.1038/S41467-019-11376-6  0.585
2019 Myburg AA, Hussey SG, Wang JP, Street NR, Mizrachi E. Systems and Synthetic Biology of Forest Trees: A Bioengineering Paradigm for Woody Biomass Feedstocks. Frontiers in Plant Science. 10: 775. PMID 31281326 DOI: 10.3389/Fpls.2019.00775  0.339
2019 Yeh CS, Wang Z, Miao F, Ma H, Kao CT, Hsu TS, Yu JH, Hung ET, Lin CC, Kuan CY, Tsai NC, Zhou C, Qu GZ, Jiang J, Liu G, ... Wang JP, et al. A novel synthetic-genetic-array based yeast one-hybrid system for high discovery rate and short processing time. Genome Research. PMID 31186303 DOI: 10.1101/Gr.245951.118  0.563
2019 Chen H, Wang JP, Liu H, Li H, Lin YJ, Shi R, Yang C, Gao J, Zhou C, Li Q, Sederoff RR, Li W, Chiang VL. Hierarchical Transcription-Factor and Chromatin Binding Network for Wood Formation in Populus trichocarpa. The Plant Cell. PMID 30755461 DOI: 10.1105/Tpc.18.00620  0.64
2018 Wang JP, Liu B, Sun Y, Chiang VL, Sederoff RR. Enzyme-Enzyme Interactions in Monolignol Biosynthesis. Frontiers in Plant Science. 9: 1942. PMID 30693007 DOI: 10.3389/Fpls.2018.01942  0.624
2018 Wang JP, Matthews ML, Naik PP, Williams CM, Ducoste JJ, Sederoff RR, Chiang VL. Flux modeling for monolignol biosynthesis. Current Opinion in Biotechnology. 56: 187-192. PMID 30557780 DOI: 10.1016/J.Copbio.2018.12.003  0.607
2018 Li S, Lin YJ, Wang P, Zhang B, Li M, Chen S, Shi R, Tunlaya-Anukit S, Liu X, Wang Z, Dai X, Yu J, Zhou C, Liu B, Wang JP, et al. Histone Acetylation Cooperating with AREB1 Transcription Factor Regulates Drought Response and Tolerance in Populus trichocarpa. The Plant Cell. PMID 30538157 DOI: 10.1105/Tpc.18.00437  0.602
2018 Yan X, Liu J, Kim H, Liu B, Huang X, Yang Z, Lin YC, Chen H, Yang C, Wang JP, Muddiman DC, Ralph J, Sederoff RR, Li Q, Chiang VL. CAD1 and CCR2 protein complex formation in monolignol biosynthesis in Populus trichocarpa. The New Phytologist. PMID 30276825 DOI: 10.1111/Nph.15505  0.655
2018 Wang JP, Matthews ML, Williams CM, Shi R, Yang C, Tunlaya-Anukit S, Chen HC, Li Q, Liu J, Lin CY, Naik P, Sun YH, Loziuk PL, Yeh TF, Kim H, et al. Improving wood properties for wood utilization through multi-omics integration in lignin biosynthesis. Nature Communications. 9: 1579. PMID 29679008 DOI: 10.1038/S41467-018-03863-Z  0.703
2018 Naik P, Wang JP, Sederoff R, Chiang V, Williams C, Ducoste JJ. Assessing the impact of the 4CL enzyme complex on the robustness of monolignol biosynthesis using metabolic pathway analysis. Plos One. 13: e0193896. PMID 29509777 DOI: 10.1371/Journal.Pone.0193896  0.623
2017 Lin YJ, Chen H, Li Q, Li W, Wang JP, Shi R, Tunlaya-Anukit S, Shuai P, Wang Z, Ma H, Li H, Sun YH, Sederoff RR, Chiang VL. Reciprocal cross-regulation of VND and SND multigene TF families for wood formation in Populus trichocarpa. Proceedings of the National Academy of Sciences of the United States of America. PMID 29078399 DOI: 10.1073/Pnas.1714422114  0.575
2017 Shi R, Wang JP, Lin YC, Li Q, Sun YH, Chen H, Sederoff RR, Chiang VL. Tissue and cell-type co-expression networks of transcription factors and wood component genes in Populus trichocarpa. Planta. PMID 28083709 DOI: 10.1007/S00425-016-2640-1  0.618
2016 Lin CY, Li Q, Tunlaya-Anukit S, Shi R, Sun YH, Wang JP, Liu J, Loziuk P, Edmunds CW, Miller ZD, Peszlen I, Muddiman DC, Sederoff RR, Chiang VL. A cell wall-bound anionic peroxidase, PtrPO21, is involved in lignin polymerization in Populus trichocarpa Tree Genetics and Genomes. 12. DOI: 10.1007/S11295-016-0978-Y  0.636
2015 Loziuk PL, Parker J, Li W, Lin CY, Wang JP, Li Q, Sederoff RR, Chiang VL, Muddiman DC. Elucidation of Xylem-Specific Transcription Factors and Absolute Quantification of Enzymes Regulating Cellulose Biosynthesis in Populus trichocarpa. Journal of Proteome Research. PMID 26325666 DOI: 10.1021/Acs.Jproteome.5B00233  0.628
2015 Wang JP, Chuang L, Loziuk PL, Chen H, Lin YC, Shi R, Qu GZ, Muddiman DC, Sederoff RR, Chiang VL. Phosphorylation is an on/off switch for 5-hydroxyconiferaldehyde O-methyltransferase activity in poplar monolignol biosynthesis. Proceedings of the National Academy of Sciences of the United States of America. PMID 26109572 DOI: 10.1073/Pnas.1510473112  0.594
2015 Liu J, Hai G, Wang C, Cao S, Xu W, Jia Z, Yang C, Wang JP, Dai S, Cheng Y. Comparative proteomic analysis of Populus trichocarpa early stem from primary to secondary growth. Journal of Proteomics. 126: 94-108. PMID 26047713 DOI: 10.1016/J.Jprot.2015.05.032  0.321
2015 Lin CY, Wang JP, Li Q, Chen HC, Liu J, Loziuk P, Song J, Williams C, Muddiman DC, Sederoff RR, Chiang VL. 4-Coumaroyl and caffeoyl shikimic acids inhibit 4-coumaric acid:coenzyme A ligases and modulate metabolic flux for 3-hydroxylation in monolignol biosynthesis of Populus trichocarpa. Molecular Plant. 8: 176-87. PMID 25578281 DOI: 10.1016/J.Molp.2014.12.003  0.661
2014 Lin CY, Wang JP, Li Q, Chen HC, Liu J, Loziuk P, Song J, Williams C, Muddiman DC, Sederoff RR, Chiang VL. 4-Coumaroyl and Caffeoyl Shikimic Acids Inhibit 4-Coumaric Acid: Coenzyme A Ligases and Modulate Metabolic Flux for 3-Hydroxylation in Monolignol Biosynthesis of Populus trichocarpa. Molecular Plant. PMID 25336570 DOI: 10.1093/mp/ssu117  0.637
2014 Li Q, Song J, Peng S, Wang JP, Qu GZ, Sederoff RR, Chiang VL. Plant biotechnology for lignocellulosic biofuel production. Plant Biotechnology Journal. 12: 1174-92. PMID 25330253 DOI: 10.1111/Pbi.12273  0.591
2014 Lin YC, Li W, Chen H, Li Q, Sun YH, Shi R, Lin CY, Wang JP, Chen HC, Chuang L, Qu GZ, Sederoff RR, Chiang VL. A simple improved-throughput xylem protoplast system for studying wood formation. Nature Protocols. 9: 2194-205. PMID 25144270 DOI: 10.1038/Nprot.2014.147  0.679
2014 Chen HC, Song J, Wang JP, Lin YC, Ducoste J, Shuford CM, Liu J, Li Q, Shi R, Nepomuceno A, Isik F, Muddiman DC, Williams C, Sederoff RR, Chiang VL. Systems biology of lignin biosynthesis in Populus trichocarpa: heteromeric 4-coumaric acid:coenzyme A ligase protein complex formation, regulation, and numerical modeling. The Plant Cell. 26: 876-93. PMID 24619612 DOI: 10.1105/Tpc.113.119685  0.701
2014 Wang JP, Naik PP, Chen HC, Shi R, Lin CY, Liu J, Shuford CM, Li Q, Sun YH, Tunlaya-Anukit S, Williams CM, Muddiman DC, Ducoste JJ, Sederoff RR, Chiang VL. Complete proteomic-based enzyme reaction and inhibition kinetics reveal how monolignol biosynthetic enzyme families affect metabolic flux and lignin in Populus trichocarpa. The Plant Cell. 26: 894-914. PMID 24619611 DOI: 10.1105/Tpc.113.120881  0.696
2013 Loziuk PL, Wang J, Li Q, Sederoff RR, Chiang VL, Muddiman DC. Understanding the role of proteolytic digestion on discovery and targeted proteomic measurements using liquid chromatography tandem mass spectrometry and design of experiments. Journal of Proteome Research. 12: 5820-9. PMID 24144163 DOI: 10.1021/Pr4008442  0.537
2013 Shi R, Shuford CM, Wang JP, Sun YH, Yang Z, Chen HC, Tunlaya-Anukit S, Li Q, Liu J, Muddiman DC, Sederoff RR, Chiang VL. Regulation of phenylalanine ammonia-lyase (PAL) gene family in wood forming tissue of Populus trichocarpa. Planta. 238: 487-97. PMID 23765265 DOI: 10.1007/S00425-013-1905-1  0.699
2013 Chen HC, Song J, Williams CM, Shuford CM, Liu J, Wang JP, Li Q, Shi R, Gokce E, Ducoste J, Muddiman DC, Sederoff RR, Chiang VL. Monolignol pathway 4-coumaric acid:coenzyme A ligases in Populus trichocarpa: novel specificity, metabolic regulation, and simulation of coenzyme A ligation fluxes. Plant Physiology. 161: 1501-16. PMID 23344904 DOI: 10.1104/Pp.112.210971  0.664
2012 Wang JP, Shuford CM, Li Q, Song J, Lin YC, Sun YH, Chen HC, Williams CM, Muddiman DC, Sederoff RR, Chiang VL. Functional redundancy of the two 5-hydroxylases in monolignol biosynthesis of Populus trichocarpa: LC-MS/MS based protein quantification and metabolic flux analysis. Planta. 236: 795-808. PMID 22628084 DOI: 10.1007/S00425-012-1663-5  0.698
2012 Shuford CM, Li Q, Sun YH, Chen HC, Wang J, Shi R, Sederoff RR, Chiang VL, Muddiman DC. Comprehensive quantification of monolignol-pathway enzymes in Populus trichocarpa by protein cleavage isotope dilution mass spectrometry. Journal of Proteome Research. 11: 3390-404. PMID 22524869 DOI: 10.1021/Pr300205A  0.68
2011 Li Q, Min D, Wang JP, Peszlen I, Horvath L, Horvath B, Nishimura Y, Jameel H, Chang HM, Chiang VL. Down-regulation of glycosyltransferase 8D genes in Populus trichocarpa caused reduced mechanical strength and xylan content in wood. Tree Physiology. 31: 226-36. PMID 21450982 DOI: 10.1093/Treephys/Tpr008  0.695
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