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David Atkinson - Publications

Affiliations: 
1972-2000 University of Groningen, Groningen, Netherlands 
Area:
Theoretical physics
Website:
http://hoogleraren.ub.rug.nl/hoogleraren/325
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54 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Gorshkova IN, Meyers NL, Herscovitz H, Mei X, Atkinson D. Human apoA-I[Lys107del] mutation affects lipid surface behavior of apoA-I and its ability to form large nascent HDL. Journal of Lipid Research. 100319. PMID 36525992 DOI: 10.1016/j.jlr.2022.100319  0.316
2018 Liu M, Mei X, Herscovitz H, Atkinson D. N-terminal mutation of apoA-I and interaction with ABCA1 reveal mechanisms of nascent HDL biogenesis. Journal of Lipid Research. PMID 30249788 DOI: 10.1194/Jlr.M084376  0.421
2017 Gorshkova IN, Mei X, Atkinson D. Arginine 123 of apolipoprotein A-I is essential for lecithin:cholesterol acyltransferase activity. Journal of Lipid Research. PMID 29208698 DOI: 10.1194/Jlr.M080986  0.414
2017 Melchior JT, Walker RG, Cooke AL, Morris J, Castleberry M, Thompson TB, Jones MK, Song HD, Rye KA, Oda MN, Sorci-Thomas MG, Thomas MJ, Heinecke JW, Mei X, Atkinson D, et al. A consensus model of human apolipoprotein A-I in its monomeric and lipid-free state. Nature Structural & Molecular Biology. PMID 29131142 DOI: 10.1038/Nsmb.3501  0.416
2016 Mei X, Liu M, Herscovitz H, Atkinson D. Probing the C-terminal domain of lipid-free apoA-I demonstrates the vital role of the H10B sequence repeat in HDL formation. Journal of Lipid Research. PMID 27317763 DOI: 10.1194/Jlr.M068874  0.426
2015 Mei X, Atkinson D. Lipid-free Apolipoprotein A-I Structure: Insights into HDL Formation and Atherosclerosis Development. Archives of Medical Research. 46: 351-60. PMID 26048453 DOI: 10.1016/J.Arcmed.2015.05.012  0.453
2014 Gorshkova IN, Mei X, Atkinson D. Binding of human apoA-I[K107del] variant to TG-rich particles: implications for mechanisms underlying hypertriglyceridemia. Journal of Lipid Research. 55: 1876-85. PMID 24919401 DOI: 10.1194/Jlr.M047241  0.389
2014 Das M, Mei X, Jayaraman S, Atkinson D, Gursky O. Amyloidogenic mutations in human apolipoprotein A-I are not necessarily destabilizing - a common mechanism of apolipoprotein A-I misfolding in familial amyloidosis and atherosclerosis. The Febs Journal. 281: 2525-42. PMID 24702826 DOI: 10.1111/Febs.12809  0.372
2014 Wang L, Mei X, Atkinson D, Small DM. Surface behavior of apolipoprotein A-I and its deletion mutants at model lipoprotein interfaces. Journal of Lipid Research. 55: 478-92. PMID 24308948 DOI: 10.1194/Jlr.M044743  0.389
2013 Gursky O, Jones MK, Mei X, Segrest JP, Atkinson D. Structural basis for distinct functions of the naturally occurring Cys mutants of human apolipoprotein A-I. Journal of Lipid Research. 54: 3244-57. PMID 24038317 DOI: 10.1194/Jlr.R037911  0.434
2012 Khachfe HM, Atkinson D. Conformation and stability properties of B17: I. Analytical investigations using circular dichroism European Biophysics Journal. 41: 639-646. PMID 22828936 DOI: 10.1007/S00249-012-0836-2  0.326
2012 Gursky O, Mei X, Atkinson D. The crystal structure of the C-terminal truncated apolipoprotein A-I sheds new light on amyloid formation by the N-terminal fragment. Biochemistry. 51: 10-8. PMID 22229410 DOI: 10.1021/Bi2017014  0.419
2012 Mei X, Atkinson D. Determining The Folding Domain Of Lipid Free Apoa-I In Solution By Mutation† Heart. 98. DOI: 10.1136/Heartjnl-2012-302920V.13  0.327
2011 Mei X, Atkinson D. Crystal structure of C-terminal truncated apolipoprotein A-I reveals the assembly of High Density Lipoprotein (HDL) by dimerization Journal of Biological Chemistry. 286: 38570-38582. PMID 21914797 DOI: 10.1074/Jbc.M111.260422  0.425
2011 Liu Y, Atkinson D. Immuno-electron cryo-microscopy imaging reveals a looped topology of apoB at the surface of human LDL. Journal of Lipid Research. 52: 1111-6. PMID 21460103 DOI: 10.1194/Jlr.M013946  0.396
2011 Gorshkova IN, Atkinson D. Enhanced binding of apolipoprotein A-I variants associated with hypertriglyceridemia to triglyceride-rich particles. Biochemistry. 50: 2040-2047. PMID 21288012 DOI: 10.1021/Bi200158B  0.366
2011 Liu Y, Luo D, Atkinson D. Human LDL core cholesterol ester packing: three-dimensional image reconstruction and SAXS simulation studies. Journal of Lipid Research. 52: 256-62. PMID 21047995 DOI: 10.1194/Jlr.M011569  0.401
2011 Liu Y, Atkinson D. Enhancing the contrast of ApoB to locate the surface components in the 3D density map of human LDL. Journal of Molecular Biology. 405: 274-83. PMID 21029740 DOI: 10.1016/J.Jmb.2010.10.034  0.374
2008 Gorshkova IN, Kypreos KE, Gantz DL, Zannis VI, Atkinson D. Biophysical properties of apolipoprotein E4 variants: implications in molecular mechanisms of correction of hypertriglyceridemia. Biochemistry. 47: 12644-54. PMID 18959431 DOI: 10.1021/Bi8015857  0.379
2008 Jiang ZG, Liu Y, Hussain MM, Atkinson D, McKnight CJ. Reconstituting initial events during the assembly of apolipoprotein B-containing lipoproteins in a cell-free system. Journal of Molecular Biology. 383: 1181-94. PMID 18804479 DOI: 10.1016/J.Jmb.2008.09.006  0.396
2007 Wang L, Hua N, Atkinson D, Small DM. The N-terminal (1-44) and C-terminal (198-243) peptides of apolipoprotein A-I behave differently at the triolein/water interface. Biochemistry. 46: 12140-51. PMID 17915945 DOI: 10.1021/Bi7010114  0.311
2007 Zhu HL, Atkinson D. Conformation and lipid binding of a C-terminal (198-243) peptide of human apolipoprotein A-I. Biochemistry. 46: 1624-1634. PMID 17279626 DOI: 10.1021/Bi061721Z  0.381
2006 Gorshkova IN, Liu T, Kan HY, Chroni A, Zannis VI, Atkinson D. Structure and stability of apolipoprotein a-I in solution and in discoidal high-density lipoprotein probed by double charge ablation and deletion mutation. Biochemistry. 45: 1242-54. PMID 16430220 DOI: 10.1021/Bi051669R  0.416
2005 Wang L, Atkinson D, Small DM. The Interfacial Properties of ApoA-I and an Amphipathic α-Helix Consensus Peptide of Exchangeable Apolipoproteins at the Triolein/Water Interface Journal of Biological Chemistry. 280: 4154-4165. DOI: 10.1074/Jbc.M411618200  0.359
2004 Zhu HL, Atkinson D. Conformation and Lipid Binding of the N-Terminal (1−44) Domain of Human Apolipoprotein A-I† Biochemistry. 43: 13156-13164. PMID 15476409 DOI: 10.1021/Bi0487894  0.373
2003 Fang Y, Gursky O, Atkinson D. Lipid-binding studies of human apolipoprotein A-I and its terminally truncated mutants. Biochemistry. 42: 13260-8. PMID 14609337 DOI: 10.1021/Bi0354031  0.423
2003 Wang L, Atkinson D, Small DM. Interfacial properties of an amphipathic alpha-helix consensus peptide of exchangeable apolipoproteins at air/water and oil/water interfaces. The Journal of Biological Chemistry. 278: 37480-91. PMID 12842901 DOI: 10.1074/Jbc.M303133200  0.322
2003 Fang Y, Gursky O, Atkinson D. Structural studies of N- and C-terminally truncated human apolipoprotein A-I. Biochemistry. 42: 6881-90. PMID 12779343 DOI: 10.1021/Bi034152T  0.347
2002 Gorshkova IN, Liu T, Zannis VI, Atkinson D. Lipid-free structure and stability of apolipoprotein A-I: probing the central region by mutation. Biochemistry. 41: 10529-39. PMID 12173940 DOI: 10.1021/Bi025807D  0.394
2000 Gorshkova IN, Liadaki K, Gursky O, Atkinson D, Zannis VI. Probing the lipid-free structure and stability of apolipoprotein A-I by mutation Biochemistry. 39: 15910-15919. PMID 11123918 DOI: 10.1021/Bi0014406  0.377
1998 Gursky O, Atkinson D. Thermodynamic analysis of human plasma apolipoprotein C-1: High temperature unfolding and low-temperature oligomer dissociation Biochemistry. 37: 1283-1291. PMID 9477954 DOI: 10.1021/Bi971801Q  0.341
1996 Gursky O, Atkinson D. High- and low-temperature unfolding of human high-density apolipoprotein A-2 Protein Science. 5: 1874-1882. PMID 8880911 DOI: 10.1002/Pro.5560050913  0.376
1996 Gursky O, Atkinson D. Thermal unfolding of human high-density apolipoprotein A-1: Implications for a lipid-free molten globular state Proceedings of the National Academy of Sciences of the United States of America. 93: 2991-2995. PMID 8610156 DOI: 10.1073/Pnas.93.7.2991  0.364
1995 Spin JM, Atkinson D. Cryoelectron microscopy of low density lipoprotein in vitreous ice Biophysical Journal. 68: 2115-2123. PMID 7612855 DOI: 10.1016/S0006-3495(95)80392-9  0.372
1992 Nolte RT, Atkinson D. Conformational analysis of apolipoprotein A-I and E-3 based on primary sequence and circular dichroism Biophysical Journal. 63: 1221-1239. PMID 1477274 DOI: 10.1016/S0006-3495(92)81698-3  0.346
1992 Atkinson D. Apolipoprotein structure: crystal and models Current Opinion in Structural Biology. 2: 482-489. DOI: 10.1016/0959-440X(92)90075-I  0.335
1989 Kodali DR, Atkinson D, Small DM. Molecular packing in triacyl-sn-glycerols: Influences of acyl chain length and unsaturation Journal of Dispersion Science and Technology. 10: 393-440. DOI: 10.1080/01932698908943182  0.328
1988 Walsh MT, Hamilton JA, Atkinson D, Small DM. Secondary and tertiary structure of apolipoproteins Advances in Experimental Medicine and Biology. 243: 123-132. PMID 3066173 DOI: 10.1007/978-1-4613-0733-4_15  0.334
1986 Maulik PR, Atkinson D, Shipley GG. X-ray scattering of vesicles of N-acyl sphingomyelins. Determination of bilayer thickness Biophysical Journal. 50: 1071-1077. PMID 3801569 DOI: 10.1016/S0006-3495(86)83551-2  0.331
1986 Walsh MT, Atkinson D. [33] Reassembly of low-density lipoproteins Methods in Enzymology. 128: 582-608. PMID 3724524 DOI: 10.1016/0076-6879(86)28093-3  0.398
1986 Cladaras C, Hadzopoulou-Cladaras M, Nolte RT, Atkinson D, Zannis VI. The complete sequence and structural analysis of human apolipoprotein B-100: relationship between apoB-100 and apoB-48 forms Embo Journal. 5: 3495-3507. PMID 3030729 DOI: 10.1002/J.1460-2075.1986.Tb04675.X  0.332
1985 Fahey DA, Small DM, Kodali DR, Atkinson D, Redgrave TG. Structure and polymorphism of 1,2-dioleoyl-3-acyl-sn-glycerols. Three- and six-layered structures Biochemistry. 24: 3757-3764. PMID 4041437 DOI: 10.1021/Bi00335A051  0.305
1984 Atkinson D, Shipley GG. Structural studies of plasma lipoproteins Basic Life Sciences. 27: 211-226. PMID 6712565 DOI: 10.1007/978-1-4899-0375-4_13  0.382
1984 Ginsburg GS, Atkinson D, Small DM. Physical properties of cholesteryl esters. Progress in Lipid Research. 23: 135-167. PMID 6399750 DOI: 10.1016/0163-7827(84)90002-X  0.326
1983 Walsh MT, Atkinson D. Solubilization of low-density lipoprotein with sodium deoxycholate and recombination of apoprotein B with dimyristoylphosphatidylcholine. Biochemistry. 22: 3170-3178. PMID 6882744 DOI: 10.1021/Bi00282A021  0.408
1979 Andrews AL, Atkinson D, Evans MTA, Finer EG, Green JP, Phillips MC, Robertson RN. The conformation and aggregation of bovine ?-casein A. I. Molecular aspects of thermal aggregation Biopolymers. 18: 1105-1121. DOI: 10.1002/Bip.1979.360180507  0.313
1978 Tall AR, Small DM, Atkinson D, Rudel LL. Studies on the structure of low density lipoproteins isolated from Macaca fascicularis fed an atherogenic diet Journal of Clinical Investigation. 62: 1354-1363. PMID 219029 DOI: 10.1172/Jci109256  0.39
1978 Atkinson D. Structural organization of the lipoprotein HDLC from atherosclerotic swine. Structural features relating the particle surface and core Biochemistry. 17: 3930-3933. PMID 213098 DOI: 10.1021/Bi00612A007  0.416
1977 Atkinson D, Deckelbaum RJ, Small DM, Shipley GG. Structure of human plasma low density lipoproteins: molecular organization of the central core Proceedings of the National Academy of Sciences of the United States of America. 74: 1042-1046. PMID 191827 DOI: 10.1073/Pnas.74.3.1042  0.406
1976 Andrews AL, Atkinson D, Barratt MD, Finer EG, Hauser H, Henry R, Leslie RB, Owens NL, Phillips MC, Robertson RN. Interaction of apoprotein from porcine high density lipoprotein with dimyristoyl lecithin. 2. Nature of lipid protein interaction European Journal of Biochemistry. 64: 549-563. PMID 179816 DOI: 10.1111/J.1432-1033.1976.Tb10335.X  0.406
1974 Atkinson D, Hauser H, Shipley GG, Stubbs JM. Structure and morphology of phosphatidylserine dispersions. Biochimica Et Biophysica Acta. 339: 10-29. PMID 4859496 DOI: 10.1016/0005-2736(74)90329-0  0.369
1974 Atkinson D, Davis MAF, Leslie RB. The structure of a high density lipoprotein (HDL3) from porcine plasma. Proceedings of the Royal Society B: Biological Sciences. 186: 165-180. PMID 4152470 DOI: 10.1098/Rspb.1974.0044  0.385
1974 Atkinson D, Green JP. Small-angle X-ray scattering studies of porcine plasma lipoproteins Journal of Applied Crystallography. 7: 179-179. DOI: 10.1107/S0021889874009083  0.31
1972 Shipley GG, Atkinson D, Scanu AM. Small‐angle X‐ray scattering of human serum high‐density lipoproteins Journal of Supramolecular Structure. 1: 98-104. PMID 4347292 DOI: 10.1002/Jss.400010203  0.33
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