David G. Smith - Publications

Affiliations: 
Anthropology University of California, Davis, Davis, CA 

132 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Roodgar M, Babveyh A, Nguyen LH, Zhou W, Sinha R, Lee H, Hanks JB, Avula M, Jiang L, Jian R, Lee H, Song G, Chaib H, Weissman IL, Batzoglou S, ... ... Smith DG, et al. Chromosome-level de novo assembly of the pig-tailed macaque genome using linked-read sequencing and HiC proximity scaffolding. Gigascience. 9. PMID 32649757 DOI: 10.1093/Gigascience/Giaa069  0.48
2019 Kanthaswamy S, Oldt RF, Said R, Grijalva J, Falak A, Jensen A, Vizor C, Houghton P, Bunlungsup S, Malaivijitnond S, Smith DG. Partial Sequence Analyses of Exon 7 of the ABO Locus of Cynomolgus (Macaca fascicularis) and Rhesus (M. mulatta) Macaques: Indeterminate Phenotypes Reveal the Presence of the O Blood Group. Hla. PMID 31448567 DOI: 10.1111/tan.13675  1
2018 Oldt RF, Kanthaswamy S, Montes M, Schumann L, Grijalva J, Bunlungsup S, Houghton P, Smith DG, Malaivijitnond S. Population genetics of the ABO locus within the rhesus (Macaca mulatta) and cynomolgus (M. fascicularis) macaque hybrid zone. International Journal of Immunogenetics. PMID 30387553 DOI: 10.1111/Iji.12405  1
2018 Day GQ, Ng J, Oldt RF, Houghton PW, Smith DG, Kanthaswamy S. DNA-based Determination of Ancestry in Cynomolgus Macaques (Macaca fascicularis). Journal of the American Association For Laboratory Animal Science : Jaalas. PMID 30165920 DOI: 10.30802/Aalas-Jaalas-17-000147  1
2018 Kanthaswamy S, Oldt RF, Ng J, Smith DG, Martínez MI, Sariol CA. Determination of major histocompatibility class I and class II genetic composition of the Caribbean Primate Center specific pathogen-free rhesus macaque (Macaca mulatta) colony based on massively parallel sequencing. Journal of Medical Primatology. PMID 29971797 DOI: 10.1111/Jmp.12353  1
2017 Bunlungsup S, Kanthaswamy S, Oldt RF, Smith DG, Houghton P, Hamada Y, Malaivijitnond S. Genetic analysis of samples from wild populations opens new perspectives on hybridization between long-tailed (Macaca fascicularis) and rhesus macaques (Macaca mulatta). American Journal of Primatology. PMID 29095514 DOI: 10.1002/Ajp.22726  1
2017 Kanthaswamy S, Ng J, Oldt R, Valdivia L, Houghton P, Smith DG. ABO Blood Group Phenotype Frequency Estimation Using Molecular Phenotyping in Rhesus and Cynomolgus Macaques. Hla. PMID 28800212 DOI: 10.1111/tan.13118  1
2017 Zhang X, Kanthaswamy S, Trask JS, Ng J, Oldt RF, Mankowski JL, Adams RJ, Smith DG. Genetic Characterization of a Captive Colony of Pigtailed Macaques (Macaca nemestrina). Journal of the American Association For Laboratory Animal Science : Jaalas. 56: 390-395. PMID 28724488  1
2017 Wendt FR, King JL, Novroski NM, Churchill JD, Ng J, Oldt RF, McCulloh KL, Weise JA, Smith DG, Kanthaswamy S, Budowle B. Flanking region variation of ForenSeq™ DNA Signature Prep Kit STR and SNP loci in Yavapai Native Americans. Forensic Science International. Genetics. 28: 146-154. PMID 28273507 DOI: 10.1016/J.Fsigen.2017.02.014  1
2017 Zhang X, Meng Y, Houghton P, Liu M, Kanthaswamy S, Oldt R, Ng J, Trask JS, Huang R, Singh B, Du H, Smith DG. Ancestry, Plasmodium cynomolgi prevalence and rhesus macaque admixture in cynomolgus macaques (Macaca fascicularis) bred for export in Chinese breeding farms. Journal of Medical Primatology. PMID 28266719 DOI: 10.1111/Jmp.12256  1
2016 Hughes CE, Rogers MP, Owings AC, Petzelt B, Mitchell J, Harry H, Williams T, Goldberg D, Labuda D, Smith DG, Cybulski JS, Malhi RS. Genetic Structure of First Nation Communities in the Pacific Northwest. Human Biology. 88: 251-263. PMID 28826319 DOI: 10.13110/Humanbiology.88.4.0251  0.68
2016 Xue C, Raveendran M, Harris RA, Fawcett GL, Liu X, White S, Dahdouli M, Rio Deiros D, Below JE, Salerno W, Cox L, Fan G, Ferguson B, Horvath J, Johnson Z, ... ... Smith DG, et al. The population genomics of rhesus macaques (Macaca mulatta) based on whole-genome sequences. Genome Research. 26: 1651-1662. PMID 27934697 DOI: 10.1101/Gr.204255.116  1
2016 McCulloh KL, Ng J, Oldt RF, Weise JA, Viray J, Budowle B, Glenn Smith D, Kanthaswamy S. The genetic structure of native Americans in North America based on the Globalfiler® STRs. Legal Medicine (Tokyo, Japan). 23: 49-54. PMID 27890103 DOI: 10.1016/J.Legalmed.2016.09.007  0.48
2016 Zhang X, Kadir KA, Quintanilla-Zariñan LF, Villano J, Houghton P, Du H, Singh B, Smith DG. Distribution and prevalence of malaria parasites among long-tailed macaques (Macaca fascicularis) in regional populations across Southeast Asia. Malaria Journal. 15: 450. PMID 27590474 DOI: 10.1186/S12936-016-1494-0  0.76
2016 Ng J, Oldt RF, McCulloh KL, Weise JA, Viray J, Budowle B, Smith DG, Kanthaswamy S. Native American population data based on the Globalfiler(®) autosomal STR loci. Forensic Science International. Genetics. PMID 27421760 DOI: 10.1016/J.Fsigen.2016.06.014  1
2016 Wendt FR, Churchill JD, Novroski NM, King JL, Ng J, Oldt RF, McCulloh KL, Weise JA, Smith DG, Kanthaswamy S, Budowle B. Genetic analysis of the Yavapai Native Americans from West-Central Arizona using the Illumina MiSeq FGx™ forensic genomics system. Forensic Science International. Genetics. 24: 18-23. PMID 27243782 DOI: 10.1016/J.Fsigen.2016.05.008  1
2016 Hasan MK, Feeroz MM, Jones-Engel L, Engel GA, Akhtar S, Kanthaswamy S, Smith DG. Performing monkeys of Bangladesh: characterizing their source and genetic variation. Primates; Journal of Primatology. PMID 26758818 DOI: 10.1007/S10329-015-0508-9  0.76
2015 Ng J, Fass JN, Durbin-Johnson B, Smith DG, Kanthaswamy S. Identifying rhesus macaque gene orthologs using heterospecific human CNV probes. Genomics Data. 6: 202-7. PMID 26697375 DOI: 10.1016/J.Gdata.2015.09.016  1
2015 Roodgar M, Ross CT, Tarara R, Lowenstine L, Dandekar S, Smith DG. Gene expression and TB pathogenesis in rhesus macaques: TR4, CD40, CD40L, FAS (CD95), and TNF are host genetic markers in peripheral blood mononuclear cells that are associated with severity of TB lesions. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 36: 396-409. PMID 26483316 DOI: 10.1016/J.Meegid.2015.10.010  0.76
2015 Huang YF, Midha M, Chen TH, Wang YT, Smith DG, Pei KJ, Chiu KP. Complete Taiwanese Macaque (Macaca cyclopis) Mitochondrial Genome: Reference-Assisted de novo Assembly with Multiple k-mer Strategy. Plos One. 10: e0130673. PMID 26125617 DOI: 10.1371/Journal.Pone.0130673  0.76
2015 Ng J, Trask JS, Smith DG, Kanthaswamy S. Heterospecific SNP diversity in humans and rhesus macaque (Macaca mulatta). Journal of Medical Primatology. 44: 194-201. PMID 25963897 DOI: 10.1111/Jmp.12174  1
2015 Ross CT, Roodgar M, Smith DG. Evolutionary distance of amino acid sequence orthologs across macaque subspecies: identifying candidate genes for SIV resistance in Chinese rhesus macaques. Plos One. 10: e0123624. PMID 25884674 DOI: 10.1371/Journal.Pone.0123624  0.76
2015 Ng J, Trask JS, Houghton P, Smith DG, Kanthaswamy S. Use of genome-wide heterospecific single-nucleotide polymorphisms to estimate linkage disequilibrium in rhesus and cynomolgus macaques. Comparative Medicine. 65: 62-9. PMID 25730759  0.76
2015 Roodgar M, Ross CT, Kenyon NJ, Marcelino G, Smith DG. Inducible nitric oxide synthase (iNOS) regulatory region variation in non-human primates. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 31: 236-44. PMID 25675838 DOI: 10.1016/J.Meegid.2015.01.015  0.76
2015 Mendoza A, Ng J, Bales KL, Mendoza SP, George DA, Smith DG, Kanthaswamy S. Population genetics of the California National Primate Research Center's (CNPRC) captive Callicebus cupreus colony. Primates; Journal of Primatology. 56: 37-44. PMID 25179309 DOI: 10.1007/S10329-014-0446-Y  0.76
2015 Ng J, Fass JN, Durbin-Johnson B, Smith DG, Kanthaswamy S. Identifying rhesus macaque gene orthologs using heterospecific human CNV probes Genomics Data. 6: 202-207. DOI: 10.1016/j.gdata.2015.09.016  0.76
2015 Ferguson B, Smith DG. Evolutionary History and Genetic Variation of Macaca mulatta and Macaca fascicularis The Nonhuman Primate in Nonclinical Drug Development and Safety Assessment. 17-35. DOI: 10.1016/B978-0-12-417144-2.00002-0  0.76
2014 Shattuck MR, Satkoski-Trask J, Deinard A, Tito RY, Smith DG, Melnick DJ, Malhi RS. Patterns of genetic variation and the role of selection in HTR1A and HTR1B in macaques (Macaca). Bmc Genetics. 15: 116. PMID 25376878 DOI: 10.1186/S12863-014-0116-5  0.76
2014 Smith DG, Ng J, George D, Trask JS, Houghton P, Singh B, Villano J, Kanthaswamy S. A genetic comparison of two alleged subspecies of Philippine cynomolgus macaques. American Journal of Physical Anthropology. 155: 136-48. PMID 24979664 DOI: 10.1002/Ajpa.22564  0.76
2014 Kanthaswamy S, Johnson Z, Trask JS, Smith DG, Ramakrishnan R, Bahk J, Ng J, Wiseman R, Kubisch HM, Vallender EJ, Rogers J, Ferguson B. Development and validation of a SNP-based assay for inferring the genetic ancestry of rhesus macaques (Macaca mulatta). American Journal of Primatology. 76: 1105-13. PMID 24953496 DOI: 10.1002/Ajp.22290  0.76
2014 Kanthaswamy S, Smith DG. Genetic and ethnohistoric evidence suggest current Native American population datasets in the FBI's CODIS database are not sufficiently representative. Forensic Science International. Genetics. 13: e13-5. PMID 24894114 DOI: 10.1016/J.Fsigen.2014.05.006  1
2014 Hasan MK, Feeroz MM, Jones-Engel L, Engel GA, Kanthaswamy S, Smith DG. Diversity and molecular phylogeny of mitochondrial DNA of rhesus macaques (Macaca mulatta) in Bangladesh. American Journal of Primatology. 76: 1094-104. PMID 24810278 DOI: 10.1002/Ajp.22296  0.76
2014 Li D, Zhang L, Yin H, Xu H, Satkoski Trask J, Smith DG, Li Y, Yang M, Zhu Q. Evolution of primate α and θ defensins revealed by analysis of genomes. Molecular Biology Reports. 41: 3859-66. PMID 24557891 DOI: 10.1007/S11033-014-3253-Z  0.68
2014 Kanthaswamy S, Elfenbein HA, Ardeshir A, Ng J, Hyde D, Smith DG, Lerche N. Familial aggregation of chronic diarrhea disease (CDD) in rhesus macaques (Macaca mulatta). American Journal of Primatology. 76: 262-70. PMID 24532180 DOI: 10.1002/Ajp.22230  0.76
2014 Shattuck MR, Satkoski-Trask J, Deinard A, Tito RY, Smith DG, Malhi RS. The evolutionary history of SLC6A4 and the role of plasticity in Macaca. American Journal of Physical Anthropology. 153: 605-16. PMID 24375078 DOI: 10.1002/Ajpa.22460  0.76
2014 Ross CT, Weise JA, Bonnar S, Nolin D, Satkoski Trask J, Smith DG, Ferguson B, Ha J, Kubisch HM, Vinson A, Kanthaswamy S. An empirical comparison of short tandem repeats (STRs) and single nucleotide polymorphisms (SNPs) for relatedness estimation in Chinese rhesus macaques (Macaca mulatta). American Journal of Primatology. 76: 313-24. PMID 24273109 DOI: 10.1002/Ajp.22235  0.76
2014 Li D, Zhang L, Yang M, Yin H, Xu H, Trask JS, Smith DG, Zhang Z, Zhu Q. The effect of monochromatic light-emitting diode light on reproductive traits of laying hens The Journal of Applied Poultry Research. 23: 367-375. DOI: 10.3382/Japr.2013-00746  0.72
2014 Pfeiffer S, Williamson RF, Sealy JC, Smith DG, Snow MH. Stable dietary isotopes and mtDNA from Woodland period southern Ontario people: Results from a tooth sampling protocol Journal of Archaeological Science. 42: 334-345. DOI: 10.1016/J.Jas.2013.11.008  0.76
2013 Achilli A, Perego UA, Lancioni H, Olivieri A, Gandini F, Hooshiar Kashani B, Battaglia V, Grugni V, Angerhofer N, Rogers MP, Herrera RJ, Woodward SR, Labuda D, Smith DG, Cybulski JS, et al. Reconciling migration models to the Americas with the variation of North American native mitogenomes. Proceedings of the National Academy of Sciences of the United States of America. 110: 14308-13. PMID 23940335 DOI: 10.1073/Pnas.1306290110  0.76
2013 Roodgar M, Lackner A, Kaushal D, Sankaran S, Dandekar S, Trask JS, Drake C, Smith DG. Expression levels of 10 candidate genes in lung tissue of vaccinated and TB-infected cynomolgus macaques. Journal of Medical Primatology. 42: 161-4. PMID 23802315 DOI: 10.1111/Jmp.12040  0.76
2013 Kanthaswamy S, Ng J, Satkoski Trask J, George DA, Kou AJ, Hoffman LN, Doherty TB, Houghton P, Smith DG. The genetic composition of populations of cynomolgus macaques (Macaca fascicularis) used in biomedical research. Journal of Medical Primatology. 42: 120-31. PMID 23480663 DOI: 10.1111/Jmp.12043  0.76
2013 Monroe C, Kemp BM, Smith DG. Exploring prehistory in the North American southwest with mitochondrial DNA diversity exhibited by Yumans and Athapaskans. American Journal of Physical Anthropology. 150: 618-31. PMID 23440652 DOI: 10.1002/Ajpa.22237  0.76
2013 Satkoski Trask J, George D, Houghton P, Kanthaswamy S, Smith DG. Population and landscape genetics of an introduced species (M. fascicularis) on the island of Mauritius. Plos One. 8: e53001. PMID 23341917 DOI: 10.1371/Journal.Pone.0053001  0.76
2013 Li DY, Xu HL, Trask JS, Zhu Q, Cheng AC, Smith DG, George D, Zhang L. Genetic diversity and population structure in wild Sichuan rhesus macaques. Molecular Biology Reports. 40: 3033-41. PMID 23269618 DOI: 10.1007/S11033-012-2377-2  0.72
2013 Satkoski Trask JA, Garnica WT, Smith DG, Houghton P, Lerche N, Kanthaswamy S. Single-nucleotide polymorphisms reveal patterns of allele sharing across the species boundary between rhesus (Macaca mulatta) and cynomolgus (M. fascicularis) macaques. American Journal of Primatology. 75: 135-44. PMID 23165690 DOI: 10.1002/Ajp.22091  0.76
2013 Kanthaswamy S, Ng J, Ross CT, Trask JS, Smith DG, Buffalo VS, Fass JN, Lin D. Identifying human-rhesus macaque gene orthologs using heterospecific SNP probes. Genomics. 101: 30-7. PMID 22982528 DOI: 10.1016/J.Ygeno.2012.09.001  0.76
2012 Kanthaswamy S, Trask JS, Ross CT, Kou A, Houghton P, Smith DG, Lerche N. A large-scale SNP-based genomic admixture analysis of the captive rhesus macaque colony at the California National Primate Research Center. American Journal of Primatology. 74: 747-57. PMID 24436199 DOI: 10.1002/Ajp.22025  0.76
2012 Premasuthan A, Ng J, Kanthaswamy S, Trask JS, Houghton P, Farkas T, Sestak K, Smith DG. Molecular ABO phenotyping in cynomolgus macaques using real-time quantitative PCR. Tissue Antigens. 80: 363-7. PMID 22861170 DOI: 10.1111/J.1399-0039.2012.01935.X  0.76
2012 Taormina PL, Satkoski Trask JA, Smith DG, Kanthaswamy S. Variation in CCL3L1 copy number in rhesus macaques (Macaca mulatta). Comparative Medicine. 62: 218-24. PMID 22776055  1
2011 Trask JS, Garnica WT, Kanthaswamy S, Malhi RS, Smith DG. 4040 SNPs for genomic analysis in the rhesus macaque (Macaca mulatta). Genomics. 98: 352-8. PMID 21907785 DOI: 10.1016/J.Ygeno.2011.08.004  0.76
2011 Trask JS, Garnica WT, Malhi RS, Kanthaswamy S, Smith DG. High-throughput single-nucleotide polymorphism discovery and the search for candidate genes for long-term SIVmac nonprogression in Chinese rhesus macaques (Macaca mulatta). Journal of Medical Primatology. 40: 224-32. PMID 21781130 DOI: 10.1111/J.1600-0684.2011.00486.X  0.76
2011 Malhi RS, Trask JS, Shattuck M, Johnson J, Chakraborty D, Kanthaswamy S, Ramakrishnan U, Smith DG. Genotyping single nucleotide polymorphisms (SNPs) across species in Old World Monkeys. American Journal of Primatology. 73: 1031-40. PMID 21630301 DOI: 10.1002/Ajp.20969  0.76
2011 Li DY, Xu HL, Smith DG, Cheng AC, Trask JS, Zhu Q, Yao YF, Du DD, Ni QY. Phylogenetic analysis of chinese rhesus macaques (Macaca mulatta) based on mitochondrial control region sequences. American Journal of Primatology. 73: 883-95. PMID 21495050 DOI: 10.1002/Ajp.20956  0.72
2011 Chancellor RL, Satkoski J, George D, Olupot W, Lichti N, Smith DG, Waser PM. Do Dispersing Monkeys Follow Kin? Evidence from Gray-cheeked Mangabeys (Lophocebus albigena). International Journal of Primatology. 32: 474-490. PMID 21475401 DOI: 10.1007/S10764-010-9483-6  0.76
2011 Kanthaswamy S, Clarke PM, Kou A, Malladi V, Trask JS, Smith DG. Association between hybrid status and reproductive success of captive male and female rhesus macaques (Macaca mulatta) at the California National Primate Research Center (CNPRC). American Journal of Primatology. 73: 671-8. PMID 21433046 DOI: 10.1002/Ajp.20948  0.76
2011 Trask JA, Malhi RS, Kanthaswamy S, Johnson J, Garnica WT, Malladi VS, Smith DG. The effect of SNP discovery method and sample size on estimation of population genetic data for Chinese and Indian rhesus macaques (Macaca mulatta). Primates; Journal of Primatology. 52: 129-38. PMID 21207104 DOI: 10.1007/S10329-010-0232-4  0.76
2011 Bunce JA, Isbell LA, Neitz M, Bonci D, Surridge AK, Jacobs GH, Smith DG. Characterization of opsin gene alleles affecting color vision in a wild population of titi monkeys (Callicebus brunneus). American Journal of Primatology. 73: 189-96. PMID 20938927 DOI: 10.1002/Ajp.20890  0.76
2011 Fan P, Xiao W, Feng J, Scott MB, Farris ZJ, Morelli TL, Sefczek T, Wright PC, Barr A, Premasuthan A, Satkoski J, Smith DG, George D, Kanthaswamy S, McIntosh AM, et al. The Evolution of Exudativory in Primates Folia Primatologica. 82: 81-82. DOI: 10.1159/000328875  1
2011 Snow M, Shafer H, Smith DG. The relationship of the Mimbres to other southwestern and Mexican populations Journal of Archaeological Science. 38: 3122-3133. DOI: 10.1016/J.Jas.2011.07.012  0.76
2010 Kemp BM, Glenn Smith D. Ancient DNA methodology: thoughts from Brian M. Kemp and David Glenn Smith on "Mitochondrial DNA of protohistoric remains of an Arikara population from South Dakota". Human Biology. 82: 227-38. PMID 20649402 DOI: 10.3378/027.082.0207  0.76
2010 Lawrence DM, Kemp BM, Eshleman J, Jantz RL, Snow M, George D, Smith DG. Mitochondrial DNA of protohistoric remains of an Arikara population from South Dakota: implications for the macro-Siouan language hypothesis. Human Biology. 82: 157-78. PMID 20649398 DOI: 10.3378/027.082.0203  0.76
2010 Kanthaswamy S, Satkoski J, Kou A, Malladi V, Glenn Smith D. Detecting signatures of inter-regional and inter-specific hybridization among the Chinese rhesus macaque specific pathogen-free (SPF) population using single nucleotide polymorphic (SNP) markers. Journal of Medical Primatology. 39: 252-65. PMID 20618591 DOI: 10.1111/J.1600-0684.2010.00430.X  0.76
2010 Zao CL, Armstrong K, Tomanek L, Cooke A, Berger R, Estep JS, Marx PA, Trask JS, Smith DG, Yee JL, Lerche NW. The complete genome and genetic characteristics of SRV-4 isolated from cynomolgus monkeys (Macaca fascicularis). Virology. 405: 390-6. PMID 20615522 DOI: 10.1016/J.Virol.2010.06.028  0.76
2010 Snow MH, Durand KR, Smith DG. Ancestral Puebloan mtDNA in Context of the Greater Southwest. Journal of Archaeological Science. 37: 1635-1645. PMID 20514346 DOI: 10.1016/J.Jas.2010.01.024  0.76
2010 Kemp BM, González-Oliver A, Malhi RS, Monroe C, Schroeder KB, McDonough J, Rhett G, Resendéz A, Peñaloza-Espinosa RI, Buentello-Malo L, Gorodesky C, Smith DG. Evaluating the Farming/Language Dispersal Hypothesis with genetic variation exhibited by populations in the Southwest and Mesoamerica. Proceedings of the National Academy of Sciences of the United States of America. 107: 6759-64. PMID 20351276 DOI: 10.1073/Pnas.0905753107  0.76
2010 Tom BK, Koskinen MT, Dayton M, Mattila AM, Johnston E, Fantin D, Denise S, Spear T, Smith DG, Satkoski J, Budowle B, Kanthaswamy S. Development of a nomenclature system for a canine STR multiplex reagent kit Journal of Forensic Sciences. 55: 597-604. PMID 20345775 DOI: 10.1111/J.1556-4029.2010.01361.X  0.76
2010 Kanthaswamy S, Kou A, Satkoski J, Penedo MC, Ward T, Ng J, Gill L, Lerche NW, Erickson BJ, Smith DG. Genetic characterization of specific pathogen-free rhesus macaque (Macaca mulatta) populations at the California National Primate Research Center (CNPRC). American Journal of Primatology. 72: 587-99. PMID 20162538 DOI: 10.1002/Ajp.20811  0.36
2009 Kanthaswamy S, Capitanio JP, Dubay CJ, Ferguson B, Folks T, Ha JC, Hotchkiss CE, Johnson ZP, Katze MG, Kean LS, Kubisch HM, Lank S, Lyons LA, Miller GM, Nylander J, ... ... Smith DG, et al. Resources for genetic management and genomics research on non-human primates at the National Primate Research Centers (NPRCs). Journal of Medical Primatology. 38: 17-23. PMID 19863674 DOI: 10.1111/J.1600-0684.2009.00371.X  0.76
2009 Flynn S, Satkoski J, Lerche N, Kanthaswamy S, Smith DG. Genetic variation at the TNF-alpha promoter and malaria susceptibility in rhesus (Macaca mulatta) and long-tailed (Macaca fascicularis) macaques. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 9: 769-77. PMID 19570728 DOI: 10.1016/J.Meegid.2009.03.011  1
2009 Dayton M, Koskinen MT, Tom BK, Mattila AM, Johnston E, Halverson J, Fantin D, Denise S, Budowle B, Smith DG, Kanthaswamy S. Developmental validation of short tandem repeat reagent kit for forensic DNA profiling of canine biological material Croatian Medical Journal. 50: 268-285. PMID 19480022 DOI: 10.3325/Cmj.2009.50.268  0.76
2009 Schroeder KB, Jakobsson M, Crawford MH, Schurr TG, Boca SM, Conrad DF, Tito RY, Osipova LP, Tarskaia LA, Zhadanov SI, Wall JD, Pritchard JK, Malhi RS, Smith DG, Rosenberg NA. Haplotypic background of a private allele at high frequency in the Americas. Molecular Biology and Evolution. 26: 995-1016. PMID 19221006 DOI: 10.1093/Molbev/Msp024  0.76
2009 Kanthaswamy S, Gill L, Satkoski J, Goyal V, Malladi V, Kou A, Basuta K, Sarkisyan L, George D, Smith DG. Development of a Chinese-Indian hybrid (Chindian) rhesus macaque colony at the California National Primate Research Center by introgression. Journal of Medical Primatology. 38: 86-96. PMID 18715266 DOI: 10.1111/J.1600-0684.2008.00305.X  0.76
2008 Kanthaswamy S, Satkoski J, George D, Kou A, Erickson BJ, Smith DG. INTERSPECIES HYBRIDIZATION AND THE STRATIFICATION OF NUCLEAR GENETIC VARIATION OF RHESUS (MACACA MULATTA) AND LONG-TAILED MACAQUES (MACACA FASCICULARIS). International Journal of Primatology. 29: 1295-1311. PMID 19122840 DOI: 10.1007/S10764-008-9295-0  0.76
2008 Baute DT, Satkoski JA, Spear TF, Smith DG, Dayton MR, Malladi VS, Goyal V, Kou A, Kinaga JL, Kanthaswamy S. Analysis of forensic SNPs in the canine mtDNA HV1 mutational hotspot region. Journal of Forensic Sciences. 53: 1325-33. PMID 18808373 DOI: 10.1111/J.1556-4029.2008.00880.X  0.76
2008 Malhi RS, Gonzalez-Oliver A, Schroeder KB, Kemp BM, Greenberg JA, Dobrowski SZ, Smith DG, Resendez A, Karafet T, Hammer M, Zegura S, Brovko T. Distribution of Y chromosomes among native North Americans: a study of Athapaskan population history. American Journal of Physical Anthropology. 137: 412-24. PMID 18618732 DOI: 10.1002/Ajpa.20883  0.76
2008 Satkoski JA, Malhi RS, Kanthaswamy S, Tito RY, Malladi VS, Smith DG. Pyrosequencing as a method for SNP identification in the rhesus macaque (Macaca mulatta) Bmc Genomics. 9. PMID 18510772 DOI: 10.1186/1471-2164-9-256  0.36
2008 Shook BA, Smith DG. Using ancient mtDNA to reconstruct the population history of northeastern North America. American Journal of Physical Anthropology. 137: 14-29. PMID 18386794 DOI: 10.1002/Ajpa.20835  0.8
2008 Fagundes NJ, Kanitz R, Eckert R, Valls AC, Bogo MR, Salzano FM, Smith DG, Silva WA, Zago MA, Ribeiro-dos-Santos AK, Santos SE, Petzl-Erler ML, Bonatto SL. Mitochondrial population genomics supports a single pre-Clovis origin with a coastal route for the peopling of the Americas. American Journal of Human Genetics. 82: 583-92. PMID 18313026 DOI: 10.1016/J.Ajhg.2007.11.013  0.76
2008 Himmelberger AL, Spear TF, Satkoski JA, George DA, Garnica WT, Malladi VS, Smith DG, Webb KM, Allard MW, Kanthaswamy S. Forensic utility of the mitochondrial hypervariable region 1 of domestic dogs, in conjunction with breed and geographic information. Journal of Forensic Sciences. 53: 81-9. PMID 18279243 DOI: 10.1111/J.1556-4029.2007.00615.X  0.76
2007 Tamm E, Kivisild T, Reidla M, Metspalu M, Smith DG, Mulligan CJ, Bravi CM, Rickards O, Martinez-Labarga C, Khusnutdinova EK, Fedorova SA, Golubenko MV, Stepanov VA, Gubina MA, Zhadanov SI, et al. Beringian standstill and spread of Native American founders. Plos One. 2: e829. PMID 17786201 DOI: 10.1371/Journal.Pone.0000829  0.76
2007 Malhi RS, Sickler B, Lin D, Satkoski J, Tito RY, George D, Kanthaswamy S, Smith DG. MamuSNP: a resource for Rhesus Macaque (Macaca mulatta) genomics. Plos One. 2: e438. PMID 17487284 DOI: 10.1371/Journal.Pone.0000438  0.76
2007 Hernandez RD, Hubisz MJ, Wheeler DA, Smith DG, Ferguson B, Rogers J, Nazareth L, Indap A, Bourquin T, McPherson J, Muzny D, Gibbs R, Nielsen R, Bustamante CD. Demographic histories and patterns of linkage disequilibrium in Chinese and Indian rhesus macaques. Science (New York, N.Y.). 316: 240-3. PMID 17431170 DOI: 10.1126/Science.1140462  0.76
2007 Schroeder KB, Schurr TG, Long JC, Rosenberg NA, Crawford MH, Tarskaia LA, Osipova LP, Zhadanov SI, Smith DG. A private allele ubiquitous in the Americas. Biology Letters. 3: 218-23. PMID 17301009 DOI: 10.1098/Rsbl.2006.0609  0.36
2007 Kemp BM, Malhi RS, McDonough J, Bolnick DA, Eshleman JA, Rickards O, Martinez-Labarga C, Johnson JR, Lorenz JG, Dixon EJ, Fifield TE, Heaton TH, Worl R, Smith DG. Genetic analysis of early holocene skeletal remains from Alaska and its implications for the settlement of the Americas. American Journal of Physical Anthropology. 132: 605-21. PMID 17243155 DOI: 10.1002/Ajpa.20543  0.76
2007 Smith DG, McDonough JW, George DA. Mitochondrial DNA variation within and among regional populations of longtail macaques (Macaca fascicularis) in relation to other species of the fascicularis group of macaques. American Journal of Primatology. 69: 182-98. PMID 17177314 DOI: 10.1002/Ajp.20337  0.76
2007 Malhi RS, Kemp BM, Eshleman JA, Cybulski J, Smith DG, Cousins S, Harry H. Mitochondrial haplogroup M discovered in prehistoric North Americans Journal of Archaeological Science. 34: 642-648. DOI: 10.1016/J.Jas.2006.07.004  0.76
2006 Bolnick DA, Bolnick DI, Smith DG. Asymmetric male and female genetic histories among Native Americans from Eastern North America. Molecular Biology and Evolution. 23: 2161-74. PMID 16916941 DOI: 10.1093/Molbev/Msl088  0.76
2006 Kanthaswamy S, Kurushima JD, Smith DG. Inferring Pongo conservation units: a perspective based on microsatellite and mitochondrial DNA analyses. Primates; Journal of Primatology. 47: 310-21. PMID 16783503 DOI: 10.1007/S10329-006-0191-Y  0.76
2006 Kyes RC, Jones-Engel L, Chalise MK, Engel G, Heidrich J, Grant R, Bajimaya SS, McDonough J, Smith DG, Ferguson B. Genetic characterization of rhesus macaques (Macaca mulatta) in Nepal. American Journal of Primatology. 68: 445-55. PMID 16541441 DOI: 10.1002/Ajp.20240  0.4
2006 Kanthaswamy S, von Dollen A, Kurushima JD, Alminas O, Rogers J, Ferguson B, Lerche NW, Allen PC, Smith DG. Microsatellite markers for standardized genetic management of captive colonies of rhesus macaques (Macaca mulatta). American Journal of Primatology. 68: 73-95. PMID 16419121 DOI: 10.1002/Ajp.20207  0.76
2006 Schroeder KB, Malhi RS, Smith DG. Opinion: Demystifying native American genetic opposition to research Evolutionary Anthropology. 15: 88-92. DOI: 10.1002/Evan.20100  0.76
2006 Kanthaswamy S, Dollen AV, Kurushima JD, Alminas O, Rogers J, Ferguson B, Lerche NW, Allen PC, Smith DG. Erratum: Microsatellite markers for standardized genetic management of captive colonies of rhesus macaques (Macaca, mulatta) (American Journal Primatology (2006) 68 (73-95)) American Journal of Primatology. 68. DOI: 10.1002/Ajp.20248  1
2005 Kemp BM, Smith DG. Use of bleach to eliminate contaminating DNA from the surface of bones and teeth. Forensic Science International. 154: 53-61. PMID 16182949 DOI: 10.1016/J.Forsciint.2004.11.017  0.92
2004 Eshleman JA, Malhi RS, Johnson JR, Kaestle FA, Lorenz J, Smith DG. Mitochondrial DNA and prehistoric settlements: native migrations on the western edge of North America. Human Biology. 76: 55-75. PMID 15222680 DOI: 10.1353/Hub.2004.0019  0.76
2004 Malhi RS, Breece KE, Shook BA, Kaestle FA, Chatters JC, Hackenberger S, Smith DG. Patterns of mtDNA diversity in northwestern North America. Human Biology. 76: 33-54. PMID 15222679 DOI: 10.1353/Hub.2004.0023  0.76
2004 Smith DG, Garcia-Pedrajas MD, Hong W, Yu Z, Gold SE, Perlin MH. An ste20 homologue in Ustilago maydis plays a role in mating and pathogenicity. Eukaryotic Cell. 3: 180-9. PMID 14871948 DOI: 10.1128/Ec.3.1.180-189.2004  0.76
2003 Bolnick DA, Smith DG. Unexpected patterns of mitochondrial DNA variation among Native Americans from the southeastern United States. American Journal of Physical Anthropology. 122: 336-54. PMID 14614755 DOI: 10.1002/Ajpa.10284  0.88
2003 Smith DG, Garcia-Pedrajas MD, Gold SE, Perlin MH. Isolation and characterization from pathogenic fungi of genes encoding ammonium permeases and their roles in dimorphism. Molecular Microbiology. 50: 259-75. PMID 14507379 DOI: 10.1046/J.1365-2958.2003.03680.X  0.76
2003 Malhi RS, Mortensen HM, Eshleman JA, Kemp BM, Lorenz JG, Kaestle FA, Johnson JR, Gorodezky C, Smith DG. Native American mtDNA prehistory in the American Southwest. American Journal of Physical Anthropology. 120: 108-24. PMID 12541329 DOI: 10.1002/Ajpa.10138  0.76
2003 Eshleman JA, Malhi RS, Smith DG. Mitochondrial DNA Studies of Native Americans: Conceptions and Misconceptions of the Population Prehistory of the Americas Evolutionary Anthropology. 12: 7-18. DOI: 10.1002/Evan.10048  0.76
2002 Kanthaswamy S, Smith DG. Population subdivision and gene flow among wild orangutans. Primates; Journal of Primatology. 43: 315-27. PMID 12426465 DOI: 10.1007/Bf02629605  1
2002 Malhi RS, Smith DG. Brief communication: Haplogroup X confirmed in prehistoric North America. American Journal of Physical Anthropology. 119: 84-6. PMID 12209576 DOI: 10.1002/Ajpa.10106  0.76
2002 Deinard AS, Lerche NW, Smith DG. Polymorphism in the rhesus macaque (Macaca mulatta) NRAMP1 gene: lack of an allelic association to tuberculosis susceptibility. Journal of Medical Primatology. 31: 8-16. PMID 12076048 DOI: 10.1034/J.1600-0684.2002.1O022.X  0.76
2002 Malhi RS, Eshleman JA, Greenberg JA, Weiss DA, Schultz Shook BA, Kaestle FA, Lorenz JG, Kemp BM, Johnson JR, Smith DG. The structure of diversity within New World mitochondrial DNA haplogroups: implications for the prehistory of North America. American Journal of Human Genetics. 70: 905-19. PMID 11845406 DOI: 10.1086/339690  0.4
2001 Rolfs BK, Wu CC, Lerche NW, Smith DG. Major histocompatibility complex class II polymorphisms in Macaca mulatta: factors influencing comprehensive genotyping of Macaca mulatta (Mamu)-DQA1 alleles by PCR-RFLP in archival samples. American Journal of Physical Anthropology. 116: 296-301. PMID 11745081 DOI: 10.1002/Ajpa.1126  0.76
2001 Malhi RS, Schultz BA, Smith DG. Distribution of mitochondrial DNA lineages among Native American tribes of Northeastern North America. Human Biology. 73: 17-55. PMID 11332644 DOI: 10.1353/Hub.2001.0008  0.76
2001 Kaestle FA, Smith DG. Ancient mitochondrial DNA evidence for prehistoric population movement: The numic expansion American Journal of Physical Anthropology. 115: 1-12. PMID 11309745 DOI: 10.1002/Ajpa.1051  0.76
2000 Smith DG, Lorenz J, Rolfs BK, Bettinger RL, Green B, Eshleman J, Schultz B, Malhi R. Implications of the distribution of Albumin Naskapi and Albumin Mexico for new world prehistory American Journal of Physical Anthropology. 111: 557-572. PMID 10727973 DOI: 10.1002/(Sici)1096-8644(200004)111:4<557::Aid-Ajpa10>3.0.Co;2-B  0.76
2000 Biardi JE, Coss RG, Smith DG. California ground squirrel (Spermophilus beecheyi) blood sera inhibits crotalid venom proteolytic activity. Toxicon : Official Journal of the International Society On Toxinology. 38: 713-21. PMID 10673162 DOI: 10.1016/S0041-0101(99)00179-8  0.76
1999 Smith DG, Kanthaswamy S, Viray J, Cody L. Additional highly polymorphic microsatellite (STR) loci for estimating kinship in rhesus macaques (Macaca mulatta). American Journal of Primatology. 50: 1-7. PMID 10588431 DOI: 10.1002/(Sici)1098-2345(200001)50:1<1::Aid-Ajp1>3.0.Co;2-T  0.44
1999 Smith DG, Malhi RS, Eshleman J, Lorenz JG, Kaestle FA. Distribution of mtDNA haplogroup X among Native North Americans. American Journal of Physical Anthropology. 110: 271-84. PMID 10516561 DOI: 10.1002/(Sici)1096-8644(199911)110:3<271::Aid-Ajpa2>3.0.Co;2-C  0.76
1995 Smith DG. Absence of deleterious effects of inbreeding in rhesus macaques International Journal of Primatology. 16: 855-870. DOI: 10.1007/Bf02735723  0.76
1993 Watkins S, Sakamoto Y, Madison J, Davis E, Smith DG, Dwulet J, Putnam FW. cDNA and protein sequence of polymorphic macaque albumins that differ in bilirubin binding Proceedings of the National Academy of Sciences of the United States of America. 90: 2409-2413. PMID 8460152 DOI: 10.1073/Pnas.90.6.2409  0.76
1993 Smith DG. A 15-year study of the association between dominance rank and reproductive success of male rhesus macaques Primates. 34: 471-480. DOI: 10.1007/Bf02382658  0.76
1987 Smith DG, Small MF. Mate choice by lineage in three captive groups of rhesus macaques (Macaca mulatta). American Journal of Physical Anthropology. 73: 185-91. PMID 3618753 DOI: 10.1002/Ajpa.1330730205  0.76
1987 Smith DG. Generational bias in mating in captive groups of rhesus monkeys (Macaca mulatta) Folia Primatologica. 49: 212-215. PMID 3504422 DOI: 10.1159/000156326  0.76
1986 Small MF, Smith DG. The influence of birth timing upon infant growth and survival in Captive Rhesus Macaques (Macaca mulatto) International Journal of Primatology. 7: 289-304. DOI: 10.1007/Bf02736393  0.76
1985 Small MF, Smith DG. Sex of infants produced by male rhesus macaques. American Naturalist. 126: 354-361. DOI: 10.1086/284422  0.76
1984 Smith DG, Small MF, Ahlfors CE, Lorey FW, Stern BR, Rolfs BK. Paternity exclusion analysis and its applications to studies of nonhuman primates. Advances in Veterinary Science and Comparative Medicine. 28: 1-24. PMID 6395670 DOI: 10.1016/B978-0-12-039228-5.50006-1  0.76
1984 Small MF, Smith DG. Sex differences in maternal investment by Macaca mulatta Behavioral Ecology and Sociobiology. 14: 313-314. DOI: 10.1007/Bf00299503  0.76
1982 Smith DG. Inbreeding in three captive groups of rhesus monkeys American Journal of Physical Anthropology. 58: 447-451. PMID 7124939 DOI: 10.1002/Ajpa.1330580413  0.76
1982 Smith DG. Segregation distortion at the transferrin locus in Macaca mulatta American Journal of Physical Anthropology. 58: 363-367. PMID 7124930 DOI: 10.1002/Ajpa.1330580403  0.76
1982 Smith DG, Small MF. Selection and the transferrin polymorphism in rhesus monkeys (Macaca mulatta). Folia Primatologica; International Journal of Primatology. 37: 127-36. PMID 7068052 DOI: 10.1159/000156025  0.76
1982 Smith DG. A test of the randomness of paternity of members of maternal sibships in six captive groups of rhesus monkeys (Macaca mulatta) International Journal of Primatology. 3: 461-468. DOI: 10.1007/Bf02693744  0.76
1982 Smith DG. A comparison of the demographic structure and growth of free-ranging and captive groups of rhesus monkeys (Macaca mulatta) Primates. 23: 24-30. DOI: 10.1007/Bf02381435  0.76
1981 Smith DG. Admixture and population replacement of the Sells Papago Indians: Three strategies Social Biology. 28: 126-144. PMID 7348441 DOI: 10.1080/19485565.1981.9988448  0.76
1981 Smith DG. Birth timing and social rank of adult male rhesus monkeys (Macaca mulatta) Journal of Medical Primatology. 10: 279-283. PMID 7343674 DOI: 10.1159/000460087  0.76
1981 Berenstain L, Rodman PS, Smith DG. Social relations between fathers and offspring in a captive group of rhesus monkeys (Macaca mulatta) Animal Behaviour. 29: 1057-1063. DOI: 10.1016/S0003-3472(81)80058-9  0.76
1981 Smith DG, Lorey FW, Small MF. Taste sensitivity to phenylthiourea (PTC) in the rhesus monkey (Macaca mulatta) Primates. 22: 404-408. DOI: 10.1007/Bf02381581  0.76
1980 Smith DG. Paternity exclusion in six captive groups of Rhesus monkeys (Macaca mulatta) American Journal of Physical Anthropology. 53: 243-249. PMID 6932179 DOI: 10.1002/Ajpa.1330530208  0.76
1980 Smith DG. Potential for cumulative inbreeding and its effects upon survival in captive groups of non-human primates Primates. 21: 430-436. DOI: 10.1007/Bf02390471  0.76
1979 Smith DG. The genetic hypothesis for susceptibility to lepromatous leprosy Human Genetics. 50: 163-177. PMID 511131 DOI: 10.1007/BF00390238  0.36
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