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Xiaolian Gao - Publications

Affiliations: 
1992- Biology and Biochemistry University of Houston, Houston, TX, United States 
Area:
Biological NMR of Nucleic Acids and Proteins; Microarray BIOCHIP Technologies
Website:
http://bchs.uh.edu/people/detail/?155622-961-5=gao

75 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Zhang J, Wang Y, Chai B, Wang J, Li L, Liu M, Zhao G, Yao L, Gao X, Yin Y, Xu J. Efficient and low-cost error removal in DNA synthesis by a high-durability MutS. Acs Synthetic Biology. PMID 32135061 DOI: 10.1021/Acssynbio.0C00079  0.314
2017 Wan W, Lu M, Wang D, Gao X, Hong J. High-fidelity de novo synthesis of pathways using microchip-synthesized oligonucleotides and general molecular biology equipment. Scientific Reports. 7: 6119. PMID 28733633 DOI: 10.1038/S41598-017-06428-0  0.311
2015 Hu D, Hu S, Wan W, Xu M, Du R, Zhao W, Gao X, Liu J, Liu H, Hong J. Effective Optimization of Antibody Affinity by Phage Display Integrated with High-Throughput DNA Synthesis and Sequencing Technologies. Plos One. 10: e0129125. PMID 26046845 DOI: 10.1371/Journal.Pone.0129125  0.308
2012 Zhao Q, Huang HC, Nagaswamy U, Xia Y, Gao X, Fox GE. UNAC tetraloops: to what extent do they mimic GNRA tetraloops? Biopolymers. 97: 617-28. PMID 22605553 DOI: 10.1002/Bip.22049  0.312
2012 Dasgupta I, Gao X, Fox GE. Structural properties of DNA oligomers containing (GACX)(n) and (GAXC)(n) tandem repeats. Biopolymers. 97: 155-64. PMID 21953019 DOI: 10.1002/Bip.21719  0.338
2011 Lang QL, Zhou XC, Zhang XL, Drabek R, Zuo ZX, Ren YL, Li TB, Chen JS, Gao XL. Microarray-based identification of tomato microRNAs and time course analysis of their response to Cucumber mosaic virus infection. Journal of Zhejiang University. Science. B. 12: 116-25. PMID 21265043 DOI: 10.1631/Jzus.B1000278  0.731
2010 Xia Y, Zhu Q, Jun KY, Wang J, Gao X. Clean STD-NMR spectrum for improved detection of ligand-protein interactions at low concentration of protein. Magnetic Resonance in Chemistry : Mrc. 48: 918-24. PMID 20957656 DOI: 10.1002/Mrc.2687  0.688
2008 Gu P, Reid JG, Gao X, Shaw CA, Creighton C, Tran PL, Zhou X, Drabek RB, Steffen DL, Hoang DM, Weiss MK, Naghavi AO, El-daye J, Khan MF, Legge GB, et al. Novel microRNA candidates and miRNA-mRNA pairs in embryonic stem (ES) cells. Plos One. 3: e2548. PMID 18648548 DOI: 10.1371/Journal.Pone.0002548  0.734
2008 Xia Y, Veeraraghavan S, Zhu Q, Gao X. Fast (4,3)D GFT-TS NMR for NOESY of small to medium-sized proteins. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 190: 142-8. PMID 17923427 DOI: 10.1016/J.Jmr.2007.09.015  0.336
2007 Vainrub A, Deluge N, Zhang X, Zhou X, Gao X. Predicting DNA duplex stability on oligonucleotide arrays. Methods in Molecular Biology (Clifton, N.J.). 382: 393-403. PMID 18220244 DOI: 10.1007/978-1-59745-304-2_24  0.309
2007 Zhu Q, Hong A, Sheng N, Zhang X, Matejko A, Jun KY, Srivannavit O, Gulari E, Gao X, Zhou X. microParaflo biochip for nucleic acid and protein analysis. Methods in Molecular Biology (Clifton, N.J.). 382: 287-312. PMID 18220239 DOI: 10.1007/978-1-59745-304-2_19  0.691
2007 Lee H, Diavatis T, Tennakoon S, Yu P, Gao X. Solution structure of DNA/RNA hybrid duplex with C8-propynyl 2'-deoxyadenosine modifications: Implication of RNase H and DNA/RNA duplex interaction. Biochimica Et Biophysica Acta. 1769: 20-8. PMID 17196678 DOI: 10.1016/J.Bbaexp.2006.11.004  0.572
2006 Anbanandam A, Albarado DC, Nguyen CT, Halder G, Gao X, Veeraraghavan S. Insights into transcription enhancer factor 1 (TEF-1) activity from the solution structure of the TEA domain. Proceedings of the National Academy of Sciences of the United States of America. 103: 17225-30. PMID 17085591 DOI: 10.1073/Pnas.0607171103  0.318
2006 Jun K, Xia Y, Han X, Timchenko L, Swanson M, Gao X. 1H, 15N, and 13C chemical shift assignments of CUG binding protein-CUGBP Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.13018/Bmr6121  0.684
2005 Zhao Q, Nagaswamy U, Lee H, Xia Y, Huang HC, Gao X, Fox GE. NMR structure and Mg2+ binding of an RNA segment that underlies the L7/L12 stalk in the E.coli 50S ribosomal subunit. Nucleic Acids Research. 33: 3145-53. PMID 15939932 DOI: 10.1093/Nar/Gki621  0.53
2005 Xia Y, Legge G, Jun KY, Qi Y, Lee H, Gao X. IP-COSY, a totally in-phase and sensitive COSY experiment. Magnetic Resonance in Chemistry : Mrc. 43: 372-9. PMID 15706609 DOI: 10.1002/Mrc.1558  0.712
2004 Jun KY, Xia Y, Han X, Zhang H, Timchenko L, Swanson MS, Gao X. (1)H, (15)N and (13)C chemical shift assignments of RNA repeats binding protein -- CUGBP1ab. Journal of Biomolecular Nmr. 30: 371-2. PMID 15756469 DOI: 10.1007/S10858-005-2598-Y  0.691
2004 Tian J, Gong H, Sheng N, Zhou X, Gulari E, Gao X, Church G. Accurate multiplex gene synthesis from programmable DNA microchips. Nature. 432: 1050-4. PMID 15616567 DOI: 10.1038/Nature03151  0.312
2004 Zhou X, Cai S, Hong A, You Q, Yu P, Sheng N, Srivannavit O, Muranjan S, Rouillard JM, Xia Y, Zhang X, Xiang Q, Ganesh R, Zhu Q, Matejko A, ... ... Gao X, et al. Microfluidic PicoArray synthesis of oligodeoxynucleotides and simultaneous assembling of multiple DNA sequences. Nucleic Acids Research. 32: 5409-17. PMID 15477391 DOI: 10.1093/Nar/Gkh879  0.373
2004 Zhu G, Xia Y, Lin D, Gao X. TROSY-based correlation and NOE spectroscopy for NMR structural studies of large proteins. Methods in Molecular Biology (Clifton, N.J.). 278: 57-78. PMID 15317991 DOI: 10.1385/1-59259-809-9:057  0.319
2004 Xia Y, Zhu G, Veeraraghavan S, Gao X. (3,2)D GFT-NMR experiments for fast data collection from proteins. Journal of Biomolecular Nmr. 29: 467-76. PMID 15243178 DOI: 10.1023/B:Jnmr.0000034352.75619.3F  0.316
2004 Rouillard JM, Lee W, Truan G, Gao X, Zhou X, Gulari E. Gene2Oligo: oligonucleotide design for in vitro gene synthesis. Nucleic Acids Research. 32: W176-80. PMID 15215375 DOI: 10.1093/Nar/Gkh401  0.355
2004 Gao X, Gulari E, Zhou X. In situ synthesis of oligonucleotide microarrays. Biopolymers. 73: 579-96. PMID 15048782 DOI: 10.1002/Bip.20005  0.333
2004 Srivannavit O, Gulari M, Gulari E, LeProust E, Pellois JP, Gao X, Zhou X. Design and fabrication of microwell array chips for a solution-based, photogenerated acid-catalyzed parallel oligonuclotide DNA synthesis Sensors and Actuators, a: Physical. 116: 150-160. DOI: 10.1016/J.Sna.2004.04.025  0.702
2003 Gao X, Zhou X, Gulari E. Light directed massively parallel on-chip synthesis of peptide arrays with t-Boc chemistry. Proteomics. 3: 2135-41. PMID 14595812 DOI: 10.1002/Pmic.200300597  0.313
2003 Xia Y, Yee A, Arrowsmith CH, Gao X. 1H(C) and 1H(N) total NOE correlations in a single 3D NMR experiment. 15N and 13C time-sharing in t1 and t2 dimensions for simultaneous data acquisition. Journal of Biomolecular Nmr. 27: 193-203. PMID 12975580 DOI: 10.1023/A:1025407905478  0.323
2003 Kwon Y, Xi Z, Kappen LS, Goldberg IH, Gao X. New complex of post-activated neocarzinostatin chromophore with DNA: bulge DNA binding from the minor groove. Biochemistry. 42: 1186-98. PMID 12564921 DOI: 10.1021/Bi0206210  0.581
2002 Gao X, Stassinopoulos A, Ji J, Kwon Y, Bare S, Goldberg IH. Induced formation of a DNA bulge structure by a molecular wedge ligand-postactivated neocarzinostatin chromophore. Biochemistry. 41: 5131-43. PMID 11955061 DOI: 10.1021/Bi012112O  0.565
2001 Nagaswamy U, Gao X, Martinis SA, Fox GE. NMR structure of a ribosomal RNA hairpin containing a conserved CUCAA pentaloop. Nucleic Acids Research. 29: 5129-39. PMID 11812846 DOI: 10.1093/Nar/29.24.5129  0.33
2001 Gao X, LeProust E, Zhang H, Srivannavit O, Gulari E, Yu P, Nishiguchi C, Xiang Q, Zhou X. A flexible light-directed DNA chip synthesis gated by deprotection using solution photogenerated acids. Nucleic Acids Research. 29: 4744-50. PMID 11713325 DOI: 10.1093/Nar/29.22.4744  0.724
2001 LeProust E, Zhang H, Yu P, Zhou X, Gao X. Characterization of oligodeoxyribonucleotide synthesis on glass plates Nucleic Acids Research. 29: 2171-2180. PMID 11353087 DOI: 10.1093/Nar/29.10.2171  0.7
2001 Han X, Gao X. Sequence specific recognition of ligand-DNA complexes studied by NMR. Current Medicinal Chemistry. 8: 551-581. PMID 11281842 DOI: 10.2174/0929867003373337  0.338
2001 Yu P, Wang W, Zhang H, Yang X, Liang TC, Gao X. Synthesis and characterization of a tetranucleotide analogue containing alternating phosphonate-amide backbone linkages. Bioorganic & Medicinal Chemistry. 9: 107-19. PMID 11197331 DOI: 10.1016/S0968-0896(00)00230-3  0.341
2000 LeProust EM, Pearson CE, Sinden RR, Gao X, Pearso CE. Unexpected formation of parallel duplex in GAA and TTC trinucleotide repeats of Friedreich's ataxia. Journal of Molecular Biology. 302: 1063-80. PMID 11183775 DOI: 10.1006/Jmbi.2000.4073  0.702
2000 Pellois JP, Wang W, Gao X. Peptide synthesis based on t-Boc chemistry and solution photogenerated acids. Journal of Combinatorial Chemistry. 2: 355-60. PMID 10891103 DOI: 10.1021/Cc0000139  0.331
2000 LeProust E, Pellois JP, Yu P, Zhang H, Gao X, Srivannavit O, Gulari E, Zhou X. Digital light-directed synthesis. A microarray platform that permits rapid reaction optimization on a combinatorial basis. Journal of Combinatorial Chemistry. 2: 349-54. PMID 10891102 DOI: 10.1021/Cc000009X  0.686
1999 Yang X, Han X, Cross C, Bare S, Sanghvi Y, Gao X. NMR structure of an antisense DNA.RNA hybrid duplex containing a 3'-CH(2)N(CH(3))-O-5' or an MMI backbone linker. Biochemistry. 38: 12586-96. PMID 10504227 DOI: 10.1021/Bi990456X  0.347
1999 Zhou X, Gao X, LeProust E, Peppllois JP, Yu P, Zhang H, Gulari E, Srivannavit O, Gulari N. Light-directed, programmable microarray synthesis Nature Genetics. 23: 84-84. DOI: 10.1038/14435  0.663
1998 Gao X, Yu P, LeProust E, Sonigo L, Pellois JP, Zhang H. Oligonucleotide synthesis using solution photogenerated acids [17] Journal of the American Chemical Society. 120: 12698-12699. DOI: 10.1021/Ja9827191  0.677
1997 Yang X, Sanghvi YS, Gao X. Conformational studies of antisense DNA by PFG NMR Journal of Biomolecular Nmr. 10: 383-388. PMID 9460243 DOI: 10.1023/A:1018375910896  0.325
1997 Huang X, Yu P, Leproust E, Gao X. An efficient and economic site-specific deuteration strategy for NMR studies of homologous oligonucleotide repeat sequences Nucleic Acids Research. 25: 4758-4763. PMID 9365253 DOI: 10.1093/Nar/25.23.4758  0.709
1997 Cross CW, Rice JS, Gao X. Solution structure of an RNA x DNA hybrid duplex containing a 3'-thioformacetal linker and an RNA A-tract. Biochemistry. 36: 4096-107. PMID 9100003 DOI: 10.1021/Bi962382K  0.388
1997 Rice JS, Gao X. Conformation of formacetal and 3'-thioformacetal nucleotide linkers and stability of their antisense RNA.DNA hybrid duplexes. Biochemistry. 36: 399-411. PMID 9003193 DOI: 10.1021/Bi961760I  0.375
1997 Zheng M, Huang X, Smith GK, Yang X, Gao X. Genetically unstable CXG repeats are structurally dynamic and have a high propensity for folding. An NMR and UV spectroscopic study. Journal of Molecular Biology. 264: 323-36. PMID 8951379 DOI: 10.1006/Jmbi.1996.0643  0.345
1996 Ji J, Hogan ME, Gao X. Solution structure of an antiparallel purine motif triplex containing a T·CG pyrimidine base triple Structure. 4: 425-435. PMID 8740365 DOI: 10.1016/S0969-2126(96)00048-2  0.342
1996 Stassinopoulos A, Ji J, Gao X, Goldberg IH. Solution structure of a two-base DNA bulge complexed with an enediyne cleaving analog. Science. 272: 1943-1946. PMID 8658168 DOI: 10.1126/Science.272.5270.1943  0.354
1995 Gao X. Structural basis for the sequence-specific DNA strand cleavage by the enediyne neocarzinostatin chromophore. Structure of the post-activated chromophore - DNA complex Biochemistry®. 34: 40-49. PMID 7819222 DOI: 10.1021/Bi00001A006  0.393
1995 Gao X, Stassinopoulos A, Gu J, Goldberg IH. NMR studies of the post-activated neocarzinostatin chromophore-DNA complex. Conformational changes induced in drug and DNA. Bioorganic & Medicinal Chemistry. 3: 795-809. PMID 7582957 DOI: 10.1016/0968-0896(95)00063-M  0.378
1995 Smith GK, Jie J, Fox GE, Gao X. DNA CTG triplet repeats involved in dynamic mutations of neurologically related gene sequences form stable duplexes. Nucleic Acids Research. 23: 4303-11. PMID 7501450 DOI: 10.1093/Nar/23.21.4303  0.363
1995 Gao X, Huang X, Smith GK, Zheng M, Liu H. New Antiparallel Duplex Motif of DNA CCG Repeats That Is Stabilized by Extrahelical Bases Symmetrically Located in the Minor Groove Journal of the American Chemical Society. 117: 8883-8884. DOI: 10.1021/Ja00139A035  0.334
1994 Gao X. T·G·G triplet in an antiparallel Purine·Purine·Pyrimidine DNA triplex. Conformational studies by NMR Biochemistry. 33: 4111-4120. PMID 8155628 DOI: 10.1021/Bi00180A003  0.392
1994 Gao X, Jeffs PW. Unusual conformation of a 3'-thioformacetal linkage in a DNA duplex. Journal of Biomolecular Nmr. 4: 17-34. PMID 8130639 DOI: 10.1007/Bf00178333  0.346
1994 Gao X, Jeffs PW. Sequence-dependent conformational heterogeneity of a hybrid DNA.RNA dodecamer duplex. Journal of Biomolecular Nmr. 4: 367-84. PMID 7517242 DOI: 10.1007/Bf00179347  0.397
1992 Gao XL, Mirau P, Patel DJ. Structure refinement of the chromomycin dimer-DNA oligomer complex in solution. Journal of Molecular Biology. 223: 259-79. PMID 1731073 DOI: 10.1016/0022-2836(92)90730-8  0.505
1992 Radhakrishnan I, Patel DJ, Gao X. Three-dimensional homonuclear NOESY-TOCSY of an intramolecular pyrimidine.purine.pyrimidine DNA triplex containing a central G.TA triple: nonexchangeable proton assignments and structural implications. Biochemistry. 31: 2514-23. PMID 1547235 DOI: 10.1021/Bi00124A011  0.719
1992 Gao X. Three-dimensional solution structure of apo-neocarzinostatin Journal of Molecular Biology. 225: 125-135. PMID 1533878 DOI: 10.1016/0022-2836(92)91030-S  0.303
1992 Gao X, Brown FK, Jeffs P, Bischofberger N, Lin KY, Pipe AJ, Noble SA. Probing structural factors stabilizing antisense oligonucleotide duplexes: NMR studies of a DNA.DNA duplex containing a formacetal linkage. Biochemistry. 31: 6228-36. PMID 1320930 DOI: 10.1021/Bi00142A009  0.374
1992 Leroy JL, Gao XL, Misra V, Guéron M, Patel DJ. Proton exchange in DNA-luzopeptin and DNA-echinomycin bisintercalation complexes: rates and processes of base-pair opening. Biochemistry. 31: 1407-15. PMID 1310611 DOI: 10.1021/Bi00120A017  0.492
1992 Radhakrishnan I, Patel DJ, Veal JM, Gao X. Solution conformation of a G.cntdot.TA [guanosine.cntdot.thymidine-5'-adenylic acid] triple in an intramolecular pyrimidine.cntdot.purine.cntdot.pyrimidine DNA triplex Journal of the American Chemical Society. 114: 6913-6915. DOI: 10.1021/Ja00043A045  0.704
1991 Gao X. Two- And Three-Dimensional Proton NMR Studies of Apo-Neocarzinostatin Biochemistry®. 30: 7730-7739. PMID 1831044 DOI: 10.1021/Bi00245A009  0.315
1991 Wang Y, de los Santos C, Gao XO, Greene K, Live D, Patel DJ. Multinuclear nuclear magnetic resonance studies of Na cation-stabilized complex formed by d(G-G-T-T-T-T-C-G-G) in solution. Implications for G-tetrad structures. Journal of Molecular Biology. 222: 819-32. PMID 1660934 DOI: 10.1016/0022-2836(91)90513-6  0.5
1991 Radhakrishnan I, Gao X, de los Santos C, Live D, Patel DJ. NMR structural studies of intramolecular (Y+)n.(R+)n(Y-)nDNA triplexes in solution: imino and amino proton and nitrogen markers of G.TA base triple formation. Biochemistry. 30: 9022-30. PMID 1654085 DOI: 10.1021/Bi00101A016  0.697
1991 Leroy JL, Gao XL, Guéron M, Patel DJ. Proton exchange and internal motions in two chromomycin dimer-DNA oligomer complexes. Biochemistry. 30: 5653-61. PMID 1645996 DOI: 10.1021/Bi00237A003  0.484
1991 Radhakrishnan I, Patel D, Gao X. NMR assignment strategy for DNA protons through three-dimensional proton-proton connectivities. Application to an intramolecular DNA triplex Journal of the American Chemical Society. 113: 8542-8544. DOI: 10.1021/Ja00022A063  0.696
1990 Gao XL, Patel DJ. Chromomycin dimer-DNA oligomer complexes. Sequence selectivity and divalent cation specificity. Biochemistry. 29: 10940-56. PMID 2176890 DOI: 10.1021/Bi00501A012  0.486
1989 Kouchakdjian M, Marinelli E, Gao XL, Johnson F, Grollman A, Patel D. NMR studies of exocyclic 1,N2-propanodeoxyguanosine adducts (X) opposite purines in DNA duplexes: protonated X(syn).A(anti) pairing (acidic pH) and X(syn).G(anti) pairing (neutral pH) at the lesion site. Biochemistry. 28: 5647-57. PMID 2775729 DOI: 10.1021/Bi00439A047  0.467
1989 Gao XL, Patel DJ. Solution structure of the chromomycin-DNA complex. Biochemistry. 28: 751-62. PMID 2713341 DOI: 10.1021/Bi00428A051  0.51
1989 Gao XL, Patel DJ. Antitumour drug-DNA interactions: NMR studies of echinomycin and chromomycin complexes. Quarterly Reviews of Biophysics. 22: 93-138. PMID 2675172 DOI: 10.1017/S0033583500003814  0.471
1988 Gao XL, Patel DJ. NMR studies of echinomycin bisintercalation complexes with d(A1-C2-G3-T4) and d(T1-C2-G3-A4) duplexes in aqueous solution: sequence-dependent formation of Hoogsteen A1.T4 and Watson--Crick T1.A4 base pairs flanking the bisintercalation site. Biochemistry. 27: 1744-51. PMID 3365421 DOI: 10.1021/Bi00405A054  0.484
1988 Gao X, Patel DJ. G(syn).cntdot.A(anti) mismatch formation in DNA dodecamers at acidic pH: pH-dependent conformational transition of G.cntdot.A mispairs detected by proton NMR Journal of the American Chemical Society. 110: 5178-5182. DOI: 10.1021/Ja00223A045  0.473
1987 Gao X, Jones RA. Nitrogen-15-labeled oligodeoxynucleotides. Characterization by nitrogen-15 NMR of d[CGTACG] containing 15N6 or 15N1 labeled deoxyadenosine Journal of the American Chemical Society. 109: 3169-3171. DOI: 10.1021/Ja00244A064  0.446
1987 Gao X, Jones RA. Nitrogen-15 labeled deoxynucleosides. Synthesis of 15N6-and 15N1-deoxyadenosines from deoxyadenosine Journal of the American Chemical Society. 109: 1275-1278. DOI: 10.1021/Ja00238A063  0.433
1986 Gao X, Gaffney BL, Hadden S, Jones RA. Transient protection. 2. One-flask synthesis of 6-O-[(4-nitrophenyl)ethyl]-2'-deoxyguanosine nucleosides The Journal of Organic Chemistry. 51: 755-758. DOI: 10.1021/Jo00355A038  0.424
1986 GAO X, GAFFNEY BL, HADDEN S, JONES RA. ChemInform Abstract: Transient Protection. Part 2. One-Flask Synthesis of 6-O-[(4-Nitrophenyl)ethyl]- 2′-deoxyguanosine Nucleosides. Chemischer Informationsdienst. 17. DOI: 10.1002/Chin.198637320  0.43
1985 Gao X, Gaffney BL, Senior M, Riddle RR, Jones RA. Methylation of thymine residues during oligonucleotide synthesis. Nucleic Acids Research. 13: 573-84. PMID 4000926 DOI: 10.1093/Nar/13.2.573  0.453
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