| Year |
Citation |
Score |
| 2024 |
Mishra A, Huang SB, Dubash T, Burr R, Edd JF, Wittner BS, Cunneely QE, Putaturo VR, Deshpande A, Antmen E, Gopinathan KA, Otani K, Miyazawa Y, Kwak JE, Guay SY, ... ... Lawrence MS, et al. Tumor cell-based liquid biopsy using high-throughput microfluidic enrichment of entire leukapheresis product. Biorxiv : the Preprint Server For Biology. PMID 38559183 DOI: 10.1101/2024.03.13.583573 |
0.473 |
|
| 2024 |
Kawale AS, Ran X, Patel PS, Saxena S, Lawrence MS, Zou L. APOBEC3A induces DNA gaps through PRIMPOL and confers gap-associated therapeutic vulnerability. Science Advances. 10: eadk2771. PMID 38241374 DOI: 10.1126/sciadv.adk2771 |
0.556 |
|
| 2023 |
Lee H, Blumberg B, Lawrence MS, Shioda T. Revisiting the use of structural similarity index in Hi-C. Nature Genetics. 55: 2049-2052. PMID 38052962 DOI: 10.1038/s41588-023-01594-6 |
0.692 |
|
| 2023 |
Takahashi M, Chong HB, Zhang S, Lazarov MJ, Harry S, Maynard M, White R, Murrey HE, Hilbert B, Neil JR, Gohar M, Ge M, Zhang J, Durr BR, Kryukov G, ... ... Lawrence MS, et al. DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Biorxiv : the Preprint Server For Biology. PMID 37961514 DOI: 10.1101/2023.10.20.563287 |
0.508 |
|
| 2023 |
Wang M, Ran X, Leung W, Kawale A, Saxena S, Ouyang J, Patel PS, Dong Y, Yin T, Shu J, Manguso RT, Lan L, Wang XF, Lawrence MS, Zou L. ATR inhibition induces synthetic lethality in mismatch repair-deficient cells and augments immunotherapy. Genes & Development. PMID 37932012 DOI: 10.1101/gad.351084.123 |
0.558 |
|
| 2023 |
Yang H, Lachtara EM, Ran X, Hopkins J, Patel PS, Zhu X, Xiao Y, Phoon L, Gao B, Zou L, Lawrence MS, Lan L. The RNA m5C modification in R-loops as an off switch of Alt-NHEJ. Nature Communications. 14: 6114. PMID 37777505 DOI: 10.1038/s41467-023-41790-w |
0.56 |
|
| 2023 |
Sanidas I, Lawrence MS, Dyson NJ. Patterns in the tapestry of chromatin-bound RB. Trends in Cell Biology. PMID 37648594 DOI: 10.1016/j.tcb.2023.07.012 |
0.681 |
|
| 2023 |
Butt Y, Sakhtemani R, Mohamad-Ramshan R, Lawrence MS, Bhagwat AS. Distinguishing preferences of human APOBEC3A and APOBEC3B for cytosines in hairpin loops, and reflection of these preferences in APOBEC-signature cancer genome mutations. Biorxiv : the Preprint Server For Biology. PMID 37577595 DOI: 10.1101/2023.08.01.551518 |
0.575 |
|
| 2023 |
Choudhuri SP, Girard L, Lim JYS, Wise JF, Freitas B, Yang D, Wong E, Hamilton S, Chien VD, Gilbreath C, Zhong J, Phat S, Myers DT, Christensen CL, Stanzione M, ... ... Lawrence MS, et al. Acquired Cross-resistance in Small Cell Lung Cancer due to Extrachromosomal DNA Amplification of paralogs. Biorxiv : the Preprint Server For Biology. PMID 37425738 DOI: 10.1101/2023.06.23.546278 |
0.664 |
|
| 2023 |
Isozaki H, Sakhtemani R, Abbasi A, Nikpour N, Stanzione M, Oh S, Langenbucher A, Monroe S, Su W, Cabanos HF, Siddiqui FM, Phan N, Jalili P, Timonina D, Bilton S, ... ... Lawrence MS, et al. Therapy-induced APOBEC3A drives evolution of persistent cancer cells. Nature. PMID 37407818 DOI: 10.1038/s41586-023-06303-1 |
0.743 |
|
| 2023 |
Guo H, Vuille JA, Wittner BS, Lachtara EM, Hou Y, Lin M, Zhao T, Raman AT, Russell HC, Reeves BA, Pleskow HM, Wu CL, Gnirke A, Meissner A, Efstathiou JA, ... ... Lawrence MS, et al. DNA hypomethylation silences anti-tumor immune genes in early prostate cancer and CTCs. Cell. PMID 37327786 DOI: 10.1016/j.cell.2023.05.028 |
0.494 |
|
| 2023 |
Matsuda S, Revandkar A, Dubash TD, Ravi A, Wittner BS, Lin M, Morris R, Burr R, Guo H, Seeger K, Szabolcs A, Che D, Nieman L, Getz GA, Ting DT, ... Lawrence MS, et al. TGF-β in the microenvironment induces a physiologically occurring immune-suppressive senescent state. Cell Reports. 42: 112129. PMID 36821441 DOI: 10.1016/j.celrep.2023.112129 |
0.445 |
|
| 2023 |
Lee H, Sanidas I, Dyson NJ, Lawrence MS. Chromatin-bound protein colocalization analysis using bedGraph2Cluster and PanChIP. Star Protocols. 4: 101991. PMID 36607812 DOI: 10.1016/j.xpro.2022.101991 |
0.736 |
|
| 2022 |
Sanidas I, Lee H, Rumde PH, Boulay G, Morris R, Golczer G, Stanzione M, Hajizadeh S, Zhong J, Ryan MB, Corcoran RB, Drapkin BJ, Rivera MN, Dyson NJ, Lawrence MS. Chromatin-bound RB targets promoters, enhancers, and CTCF-bound loci and is redistributed by cell-cycle progression. Molecular Cell. PMID 35981542 DOI: 10.1016/j.molcel.2022.07.014 |
0.749 |
|
| 2022 |
Stanzione M, Zhong J, Wong E, LaSalle TJ, Wise JF, Simoneau A, Myers DT, Phat S, Sade-Feldman M, Lawrence MS, Hadden MK, Zou L, Farago AF, Dyson NJ, Drapkin BJ. Translesion DNA synthesis mediates acquired resistance to olaparib plus temozolomide in small cell lung cancer. Science Advances. 8: eabn1229. PMID 35559669 DOI: 10.1126/sciadv.abn1229 |
0.734 |
|
| 2022 |
Sakhtemani R, Perera MLW, Hübschmann D, Siebert R, Lawrence MS, Bhagwat AS. Human activation-induced deaminase lacks strong replicative strand bias or preference for cytosines in hairpin loops. Nucleic Acids Research. PMID 35524550 DOI: 10.1093/nar/gkac296 |
0.637 |
|
| 2022 |
Karabacak NM, Zheng Y, Dubash TD, Burr R, Micalizzi DS, Wittner BS, Lin M, Wiley DF, Comaills V, Emmons E, Niederhoffer KL, Ho U, Ukleja J, Che D, Stowe H, ... ... Lawrence MS, et al. Differential kinase activity across prostate tumor compartments defines sensitivity to target inhibition. Cancer Research. PMID 35045985 DOI: 10.1158/0008-5472.can-21-2609 |
0.469 |
|
| 2022 |
Krishnan B, Yasuhara T, Rumde P, Stanzione M, Lu C, Lee H, Lawrence MS, Zou L, Nieman LT, Sanidas I, Dyson NJ. Active RB causes visible changes in nuclear organization. The Journal of Cell Biology. 221. PMID 35019938 DOI: 10.1083/jcb.202102144 |
0.73 |
|
| 2021 |
Guo H, Golczer G, Wittner BS, Langenbucher A, Zachariah M, Dubash TD, Hong X, Comaills V, Burr R, Ebright RY, Horwitz E, Vuille JA, Hajizadeh S, Wiley DF, Reeves BA, ... ... Lawrence MS, et al. NR4A1 regulates expression of immediate early genes, suppressing replication stress in cancer. Molecular Cell. 81: 4041-4058.e15. PMID 34624217 DOI: 10.1016/j.molcel.2021.09.016 |
0.647 |
|
| 2021 |
Langenbucher A, Bowen D, Sakhtemani R, Bournique E, Wise JF, Zou L, Bhagwat AS, Buisson R, Lawrence MS. An extended APOBEC3A mutation signature in cancer. Nature Communications. 12: 1602. PMID 33707442 DOI: 10.1038/s41467-021-21891-0 |
0.706 |
|
| 2020 |
Vidula N, Dubash TD, Lawrence MS, Simoneau A, Niemierko A, Blouch EL, Nagy RJ, Roh W, Chirn B, Reeves B, Malvarosa G, Lennerz JK, Isakoff SJ, Juric D, Micalizzi DS, et al. Identification of somatically acquired BRCA1/2 mutations by cfDNA analysis in patients with metastatic breast cancer. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 32571788 DOI: 10.1158/1078-0432.Ccr-20-0638 |
0.651 |
|
| 2020 |
Jalili P, Bowen D, Langenbucher A, Park S, Aguirre K, Corcoran RB, Fleischman AG, Lawrence MS, Zou L, Buisson R. Quantification of ongoing APOBEC3A activity in tumor cells by monitoring RNA editing at hotspots. Nature Communications. 11: 2971. PMID 32532990 DOI: 10.1038/S41467-020-16802-8 |
0.586 |
|
| 2020 |
Lee S, Micalizzi D, Truesdell SS, Bukhari SIA, Boukhali M, Lombardi-Story J, Kato Y, Choo MK, Dey-Guha I, Ji F, Nicholson BT, Myers DT, Lee D, Mazzola MA, Raheja R, ... ... Lawrence MS, et al. A post-transcriptional program of chemoresistance by AU-rich elements and TTP in quiescent leukemic cells. Genome Biology. 21: 33. PMID 32039742 DOI: 10.1186/S13059-020-1936-4 |
0.457 |
|
| 2019 |
Porter RL, Magnus NKC, Thapar V, Morris R, Szabolcs A, Neyaz A, Kulkarni AS, Tai E, Chougule A, Hillis A, Golczer G, Guo H, Yamada T, Kurokawa T, Yashaswini C, ... ... Lawrence MS, et al. Epithelial to mesenchymal plasticity and differential response to therapies in pancreatic ductal adenocarcinoma. Proceedings of the National Academy of Sciences of the United States of America. PMID 31843922 DOI: 10.1073/Pnas.1914915116 |
0.439 |
|
| 2019 |
Sakhtemani R, Senevirathne V, Stewart J, Perera MLW, Pique-Regi R, Lawrence MS, Bhagwat AS. Genome-wide mapping of regions preferentially targeted by the human DNA-cytosine deaminase APOBEC3A using uracil-DNA pulldown and sequencing. The Journal of Biological Chemistry. PMID 31431505 DOI: 10.1074/Jbc.Ra119.008053 |
0.636 |
|
| 2019 |
Farago AF, Yeap BY, Stanzione M, Hung YP, Heist RS, Marcoux JP, Zhong J, Rangachari D, Barbie DA, Phat S, Myers DT, Morris R, Kem M, Dubash TD, Kennedy EA, ... ... Lawrence MS, et al. Combination Olaparib and Temozolomide in Relapsed Small Cell Lung Cancer. Cancer Discovery. PMID 31416802 DOI: 10.1158/2159-8290.Cd-19-0582 |
0.704 |
|
| 2019 |
Medford AJ, Dubash TD, Juric D, Spring L, Niemierko A, Vidula N, Peppercorn J, Isakoff S, Reeves BA, LiCausi JA, Wesley B, Malvarosa G, Yuen M, Wittner BS, Lawrence MS, et al. Blood-based monitoring identifies acquired and targetable driver mutations in endocrine-resistant metastatic breast cancer. Npj Precision Oncology. 3: 18. PMID 31341951 DOI: 10.1038/s41698-019-0090-5 |
0.498 |
|
| 2019 |
Buisson R, Langenbucher A, Bowen D, Kwan EE, Benes CH, Zou L, Lawrence MS. Passenger hotspot mutations in cancer driven by APOBEC3A and mesoscale genomic features. Science (New York, N.Y.). 364. PMID 31249028 DOI: 10.1126/Science.Aaw2872 |
0.598 |
|
| 2019 |
Ligorio M, Sil S, Malagon-Lopez J, Nieman LT, Misale S, Di Pilato M, Ebright RY, Karabacak MN, Kulkarni AS, Liu A, Vincent Jordan N, Franses JW, Philipp J, Kreuzer J, Desai N, ... ... Lawrence MS, et al. Stromal Microenvironment Shapes the Intratumoral Architecture of Pancreatic Cancer. Cell. PMID 31155233 DOI: 10.1016/J.Cell.2019.05.012 |
0.492 |
|
| 2019 |
Sanidas I, Morris R, Fella KA, Rumde PH, Boukhali M, Tai EC, Ting DT, Lawrence MS, Haas W, Dyson NJ. A Code of Mono-phosphorylation Modulates the Function of RB. Molecular Cell. PMID 30711375 DOI: 10.1016/J.Molcel.2019.01.004 |
0.67 |
|
| 2018 |
Hong X, Sullivan RJ, Kalinich M, Kwan TT, Giobbie-Hurder A, Pan S, LiCausi JA, Milner JD, Nieman LT, Wittner BS, Ho U, Chen T, Kapur R, Lawrence DP, Flaherty KT, ... ... Lawrence M, et al. Molecular signatures of circulating melanoma cells for monitoring early response to immune checkpoint therapy. Proceedings of the National Academy of Sciences of the United States of America. PMID 29453278 DOI: 10.1073/Pnas.1719264115 |
0.458 |
|
| 2017 |
Polak P, Kim J, Braunstein LZ, Karlic R, Haradhavala NJ, Tiao G, Rosebrock D, Livitz D, Kübler K, Mouw KW, Kamburov A, Maruvka YE, Leshchiner I, Lander ES, Golub TR, ... ... Lawrence MS, et al. A mutational signature reveals alterations underlying deficient homologous recombination repair in breast cancer. Nature Genetics. PMID 28825726 DOI: 10.1038/Ng.3934 |
0.592 |
|
| 2017 |
Buisson R, Lawrence MS, Benes CH, Zou L. APOBEC3A and 3B activities render cancer cells susceptible to ATR inhibition. Cancer Research. PMID 28698210 DOI: 10.1158/0008-5472.Can-16-3389 |
0.623 |
|
| 2017 |
Rheinbay E, Parasuraman P, Grimsby J, Tiao G, Engreitz JM, Kim J, Lawrence MS, Taylor-Weiner A, Rodriguez-Cuevas S, Rosenberg M, Hess J, Stewart C, Maruvka YE, Stojanov P, Cortes ML, et al. Recurrent and functional regulatory mutations in breast cancer. Nature. PMID 28658208 DOI: 10.1038/Nature22992 |
0.489 |
|
| 2016 |
Giannakis M, Mu XJ, Shukla SA, Qian ZR, Cohen O, Nishihara R, Bahl S, Cao Y, Amin-Mansour A, Yamauchi M, Sukawa Y, Stewart C, Rosenberg M, Mima K, Inamura K, ... ... Lawrence MS, et al. Genomic Correlates of Immune-Cell Infiltrates in Colorectal Carcinoma. Cell Reports. 17: 1206. PMID 27760322 DOI: 10.1016/J.Celrep.2016.10.009 |
0.385 |
|
| 2016 |
Giannakis M, Mu XJ, Shukla SA, Qian ZR, Cohen O, Nishihara R, Bahl S, Cao Y, Amin-Mansour A, Yamauchi M, Sukawa Y, Stewart C, Rosenberg M, Mima K, Inamura K, ... ... Lawrence MS, et al. Genomic Correlates of Immune-Cell Infiltrates in Colorectal Carcinoma. Cell Reports. PMID 27149842 DOI: 10.1016/J.Celrep.2016.03.075 |
0.464 |
|
| 2016 |
Haradhvala NJ, Polak P, Stojanov P, Covington KR, Shinbrot E, Hess JM, Rheinbay E, Kim J, Maruvka YE, Braunstein LZ, Kamburov A, Hanawalt PC, Wheeler DA, Koren A, Lawrence MS, et al. Mutational Strand Asymmetries in Cancer Genomes Reveal Mechanisms of DNA Damage and Repair. Cell. PMID 26806129 DOI: 10.1016/J.Cell.2015.12.050 |
0.316 |
|
| 2015 |
Brastianos PK, Carter SL, Santagata S, Cahill DP, Taylor-Weiner A, Jones RT, Van Allen EM, Lawrence MS, Horowitz PM, Cibulskis K, Ligon KL, Tabernero J, Seoane J, Martinez-Saez E, Curry WT, et al. Genomic Characterization of Brain Metastases Reveals Branched Evolution and Potential Therapeutic Targets. Cancer Discovery. PMID 26410082 DOI: 10.1158/2159-8290.Cd-15-0369 |
0.382 |
|
| 2015 |
Kamburov A, Lawrence MS, Polak P, Leshchiner I, Lage K, Golub TR, Lander ES, Getz G. Comprehensive assessment of cancer missense mutation clustering in protein structures. Proceedings of the National Academy of Sciences of the United States of America. 112: E5486-95. PMID 26392535 DOI: 10.1073/pnas.1516373112 |
0.471 |
|
| 2015 |
Stachler MD, Taylor-Weiner A, Peng S, McKenna A, Agoston AT, Odze RD, Davison JM, Nason KS, Loda M, Leshchiner I, Stewart C, Stojanov P, Seepo S, Lawrence MS, Ferrer-Torres D, et al. Paired exome analysis of Barrett's esophagus and adenocarcinoma. Nature Genetics. 47: 1047-55. PMID 26192918 DOI: 10.1038/Ng.3343 |
0.463 |
|
| 2015 |
Brat DJ, Verhaak RG, Aldape KD, Yung WK, Salama SR, Cooper LA, Rheinbay E, Miller CR, Vitucci M, Morozova O, Robertson AG, Noushmehr H, Laird PW, Cherniack AD, ... ... Lawrence MS, et al. Comprehensive, Integrative Genomic Analysis of Diffuse Lower-Grade Gliomas. The New England Journal of Medicine. 372: 2481-98. PMID 26061751 DOI: 10.1056/Nejmoa1402121 |
0.372 |
|
| 2015 |
Polak P, Karli? R, Koren A, Thurman R, Sandstrom R, Lawrence MS, Reynolds A, Rynes E, Vlahovi?ek K, Stamatoyannopoulos JA, Sunyaev SR. Cell-of-origin chromatin organization shapes the mutational landscape of cancer. Nature. 518: 360-4. PMID 25693567 DOI: 10.1038/Nature14221 |
0.319 |
|
| 2014 |
Perry JA, Kiezun A, Tonzi P, Van Allen EM, Carter SL, Baca SC, Cowley GS, Bhatt AS, Rheinbay E, Pedamallu CS, Helman E, Taylor-Weiner A, McKenna A, DeLuca DS, Lawrence MS, et al. Complementary genomic approaches highlight the PI3K/mTOR pathway as a common vulnerability in osteosarcoma. Proceedings of the National Academy of Sciences of the United States of America. 111: E5564-73. PMID 25512523 DOI: 10.1073/Pnas.1419260111 |
0.473 |
|
| 2014 |
Giannakis M, Hodis E, Jasmine Mu X, Yamauchi M, Rosenbluh J, Cibulskis K, Saksena G, Lawrence MS, Qian ZR, Nishihara R, Van Allen EM, Hahn WC, Gabriel SB, Lander ES, Getz G, et al. RNF43 is frequently mutated in colorectal and endometrial cancers. Nature Genetics. 46: 1264-6. PMID 25344691 DOI: 10.1038/Ng.3127 |
0.448 |
|
| 2014 |
Cho J, Bass AJ, Lawrence MS, Cibulskis K, Cho A, Lee SN, Yamauchi M, Wagle N, Pochanard P, Kim N, Park AK, Won J, Hur HS, Greulich H, Ogino S, et al. Colon cancer-derived oncogenic EGFR G724S mutant identified by whole genome sequence analysis is dependent on asymmetric dimerization and sensitive to cetuximab. Molecular Cancer. 13: 141. PMID 24894453 DOI: 10.1186/1476-4598-13-141 |
0.436 |
|
| 2014 |
Van Allen EM, Wagle N, Stojanov P, Perrin DL, Cibulskis K, Marlow S, Jane-Valbuena J, Friedrich DC, Kryukov G, Carter SL, McKenna A, Sivachenko A, Rosenberg M, Kiezun A, Voet D, ... Lawrence M, et al. Whole-exome sequencing and clinical interpretation of formalin-fixed, paraffin-embedded tumor samples to guide precision cancer medicine. Nature Medicine. 20: 682-8. PMID 24836576 DOI: 10.1038/Nm.3559 |
0.414 |
|
| 2014 |
Brooks AN, Choi PS, de Waal L, Sharifnia T, Imielinski M, Saksena G, Pedamallu CS, Sivachenko A, Rosenberg M, Chmielecki J, Lawrence MS, DeLuca DS, Getz G, Meyerson M. A pan-cancer analysis of transcriptome changes associated with somatic mutations in U2AF1 reveals commonly altered splicing events. Plos One. 9: e87361. PMID 24498085 DOI: 10.1371/Journal.Pone.0087361 |
0.322 |
|
| 2014 |
Lawrence MS, Stojanov P, Mermel CH, Robinson JT, Garraway LA, Golub TR, Meyerson M, Gabriel SB, Lander ES, Getz G. Discovery and saturation analysis of cancer genes across 21 tumour types. Nature. 505: 495-501. PMID 24390350 DOI: 10.1038/Nature12912 |
0.494 |
|
| 2014 |
Polak P, Lawrence MS, Haugen E, Stoletzki N, Stojanov P, Thurman RE, Garraway LA, Mirkin S, Getz G, Stamatoyannopoulos JA, Sunyaev SR. Reduced local mutation density in regulatory DNA of cancer genomes is linked to DNA repair. Nature Biotechnology. 32: 71-5. PMID 24336318 DOI: 10.1038/Nbt.2778 |
0.32 |
|
| 2013 |
Zack TI, Schumacher SE, Carter SL, Cherniack AD, Saksena G, Tabak B, Lawrence MS, Zhsng CZ, Wala J, Mermel CH, Sougnez C, Gabriel SB, Hernandez B, Shen H, Laird PW, et al. Pan-cancer patterns of somatic copy number alteration. Nature Genetics. 45: 1134-40. PMID 24071852 DOI: 10.1038/Ng.2760 |
0.323 |
|
| 2013 |
Roberts SA, Lawrence MS, Klimczak LJ, Grimm SA, Fargo D, Stojanov P, Kiezun A, Kryukov GV, Carter SL, Saksena G, Harris S, Shah RR, Resnick MA, Getz G, Gordenin DA. An APOBEC cytidine deaminase mutagenesis pattern is widespread in human cancers. Nature Genetics. 45: 970-6. PMID 23852170 DOI: 10.1038/Ng.2702 |
0.301 |
|
| 2013 |
Lawrence MS, Stojanov P, Polak P, Kryukov GV, Cibulskis K, Sivachenko A, Carter SL, Stewart C, Mermel CH, Roberts SA, Kiezun A, Hammerman PS, McKenna A, Drier Y, Zou L, et al. Mutational heterogeneity in cancer and the search for new cancer-associated genes. Nature. 499: 214-8. PMID 23770567 DOI: 10.1038/Nature12213 |
0.503 |
|
| 2013 |
Baca SC, Prandi D, Lawrence MS, Mosquera JM, Romanel A, Drier Y, Park K, Kitabayashi N, MacDonald TY, Ghandi M, Van Allen E, Kryukov GV, Sboner A, Theurillat JP, Soong TD, et al. Punctuated evolution of prostate cancer genomes. Cell. 153: 666-77. PMID 23622249 DOI: 10.1016/J.Cell.2013.03.021 |
0.446 |
|
| 2013 |
Dulak AM, Stojanov P, Peng S, Lawrence MS, Fox C, Stewart C, Bandla S, Imamura Y, Schumacher SE, Shefler E, McKenna A, Carter SL, Cibulskis K, Sivachenko A, Saksena G, et al. Exome and whole-genome sequencing of esophageal adenocarcinoma identifies recurrent driver events and mutational complexity. Nature Genetics. 45: 478-86. PMID 23525077 DOI: 10.1038/Ng.2591 |
0.477 |
|
| 2013 |
Landau DA, Carter SL, Stojanov P, McKenna A, Stevenson K, Lawrence MS, Sougnez C, Stewart C, Sivachenko A, Wang L, Wan Y, Zhang W, Shukla SA, Vartanov A, Fernandes SM, et al. Evolution and impact of subclonal mutations in chronic lymphocytic leukemia. Cell. 152: 714-26. PMID 23415222 DOI: 10.1016/J.Cell.2013.01.019 |
0.462 |
|
| 2013 |
Cibulskis K, Lawrence MS, Carter SL, Sivachenko A, Jaffe D, Sougnez C, Gabriel S, Meyerson M, Lander ES, Getz G. Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples. Nature Biotechnology. 31: 213-9. PMID 23396013 DOI: 10.1038/Nbt.2514 |
0.475 |
|
| 2013 |
Pugh TJ, Morozova O, Attiyeh EF, Asgharzadeh S, Wei JS, Auclair D, Carter SL, Cibulskis K, Hanna M, Kiezun A, Kim J, Lawrence MS, Lichenstein L, McKenna A, Pedamallu CS, et al. The genetic landscape of high-risk neuroblastoma. Nature Genetics. 45: 279-84. PMID 23334666 DOI: 10.1038/Ng.2529 |
0.46 |
|
| 2013 |
Drier Y, Lawrence MS, Carter SL, Stewart C, Gabriel SB, Lander ES, Meyerson M, Beroukhim R, Getz G. Somatic rearrangements across cancer reveal classes of samples with distinct patterns of DNA breakage and rearrangement-induced hypermutability. Genome Research. 23: 228-35. PMID 23124520 DOI: 10.1101/Gr.141382.112 |
0.492 |
|
| 2012 |
Imielinski M, Berger AH, Hammerman PS, Hernandez B, Pugh TJ, Hodis E, Cho J, Suh J, Capelletti M, Sivachenko A, Sougnez C, Auclair D, Lawrence MS, Stojanov P, Cibulskis K, et al. Mapping the hallmarks of lung adenocarcinoma with massively parallel sequencing. Cell. 150: 1107-20. PMID 22980975 DOI: 10.1016/J.Cell.2012.08.029 |
0.464 |
|
| 2012 |
Hodis E, Watson IR, Kryukov GV, Arold ST, Imielinski M, Theurillat JP, Nickerson E, Auclair D, Li L, Place C, Dicara D, Ramos AH, Lawrence MS, Cibulskis K, Sivachenko A, et al. A landscape of driver mutations in melanoma. Cell. 150: 251-63. PMID 22817889 DOI: 10.1016/J.Cell.2012.06.024 |
0.446 |
|
| 2012 |
Lee RS, Stewart C, Carter SL, Ambrogio L, Cibulskis K, Sougnez C, Lawrence MS, Auclair D, Mora J, Golub TR, Biegel JA, Getz G, Roberts CW. A remarkably simple genome underlies highly malignant pediatric rhabdoid cancers. The Journal of Clinical Investigation. 122: 2983-8. PMID 22797305 DOI: 10.1172/JCI64400 |
0.305 |
|
| 2012 |
Banerji S, Cibulskis K, Rangel-Escareno C, Brown KK, Carter SL, Frederick AM, Lawrence MS, Sivachenko AY, Sougnez C, Zou L, Cortes ML, Fernandez-Lopez JC, Peng S, Ardlie KG, Auclair D, et al. Sequence analysis of mutations and translocations across breast cancer subtypes. Nature. 486: 405-9. PMID 22722202 DOI: 10.1038/Nature11154 |
0.484 |
|
| 2012 |
Berger MF, Hodis E, Heffernan TP, Deribe YL, Lawrence MS, Protopopov A, Ivanova E, Watson IR, Nickerson E, Ghosh P, Zhang H, Zeid R, Ren X, Cibulskis K, Sivachenko AY, et al. Melanoma genome sequencing reveals frequent PREX2 mutations. Nature. 485: 502-6. PMID 22622578 DOI: 10.1038/Nature11071 |
0.474 |
|
| 2012 |
Barbieri CE, Baca SC, Lawrence MS, Demichelis F, Blattner M, Theurillat JP, White TA, Stojanov P, Van Allen E, Stransky N, Nickerson E, Chae SS, Boysen G, Auclair D, Onofrio RC, et al. Exome sequencing identifies recurrent SPOP, FOXA1 and MED12 mutations in prostate cancer. Nature Genetics. 44: 685-9. PMID 22610119 DOI: 10.1038/Ng.2279 |
0.446 |
|
| 2012 |
Lohr JG, Stojanov P, Lawrence MS, Auclair D, Chapuy B, Sougnez C, Cruz-Gordillo P, Knoechel B, Asmann YW, Slager SL, Novak AJ, Dogan A, Ansell SM, Link BK, Zou L, et al. Discovery and prioritization of somatic mutations in diffuse large B-cell lymphoma (DLBCL) by whole-exome sequencing. Proceedings of the National Academy of Sciences of the United States of America. 109: 3879-84. PMID 22343534 DOI: 10.1073/Pnas.1121343109 |
0.467 |
|
| 2011 |
Wang L, Lawrence MS, Wan Y, Stojanov P, Sougnez C, Stevenson K, Werner L, Sivachenko A, DeLuca DS, Zhang L, Zhang W, Vartanov AR, Fernandes SM, Goldstein NR, Folco EG, et al. SF3B1 and other novel cancer genes in chronic lymphocytic leukemia. The New England Journal of Medicine. 365: 2497-506. PMID 22150006 DOI: 10.1056/Nejmoa1109016 |
0.478 |
|
| 2011 |
Bass AJ, Lawrence MS, Brace LE, Ramos AH, Drier Y, Cibulskis K, Sougnez C, Voet D, Saksena G, Sivachenko A, Jing R, Parkin M, Pugh T, Verhaak RG, Stransky N, et al. Genomic sequencing of colorectal adenocarcinomas identifies a recurrent VTI1A-TCF7L2 fusion. Nature Genetics. 43: 964-8. PMID 21892161 DOI: 10.1038/Ng.936 |
0.487 |
|
| 2011 |
Stransky N, Egloff AM, Tward AD, Kostic AD, Cibulskis K, Sivachenko A, Kryukov GV, Lawrence MS, Sougnez C, McKenna A, Shefler E, Ramos AH, Stojanov P, Carter SL, Voet D, et al. The mutational landscape of head and neck squamous cell carcinoma. Science (New York, N.Y.). 333: 1157-60. PMID 21798893 DOI: 10.1126/Science.1208130 |
0.459 |
|
| 2011 |
Chapman MA, Lawrence MS, Keats JJ, Cibulskis K, Sougnez C, Schinzel AC, Harview CL, Brunet JP, Ahmann GJ, Adli M, Anderson KC, Ardlie KG, Auclair D, Baker A, Bergsagel PL, et al. Initial genome sequencing and analysis of multiple myeloma. Nature. 471: 467-72. PMID 21430775 DOI: 10.1038/Nature09837 |
0.512 |
|
| 2011 |
Berger MF, Lawrence MS, Demichelis F, Drier Y, Cibulskis K, Sivachenko AY, Sboner A, Esgueva R, Pflueger D, Sougnez C, Onofrio R, Carter SL, Park K, Habegger L, Ambrogio L, et al. The genomic complexity of primary human prostate cancer. Nature. 470: 214-20. PMID 21307934 DOI: 10.1038/Nature09744 |
0.436 |
|
| 2010 |
Beroukhim R, Mermel CH, Porter D, Wei G, Raychaudhuri S, Donovan J, Barretina J, Boehm JS, Dobson J, Urashima M, Mc Henry KT, Pinchback RM, Ligon AH, Cho YJ, Haery L, ... ... Lawrence MS, et al. The landscape of somatic copy-number alteration across human cancers. Nature. 463: 899-905. PMID 20164920 DOI: 10.1038/Nature08822 |
0.46 |
|
| 2009 |
Liu JM, Livny J, Lawrence MS, Kimball MD, Waldor MK, Camilli A. Experimental discovery of sRNAs in Vibrio cholerae by direct cloning, 5S/tRNA depletion and parallel sequencing. Nucleic Acids Research. 37: e46. PMID 19223322 DOI: 10.1093/Nar/Gkp080 |
0.492 |
|
| 2008 |
Ding L, Getz G, Wheeler DA, Mardis ER, McLellan MD, Cibulskis K, Sougnez C, Greulich H, Muzny DM, Morgan MB, Fulton L, Fulton RS, Zhang Q, Wendl MC, Lawrence MS, et al. Somatic mutations affect key pathways in lung adenocarcinoma. Nature. 455: 1069-75. PMID 18948947 DOI: 10.1038/Nature07423 |
0.478 |
|
| 2007 |
Lawrence MS, Phillips KJ, Liu DR. Supercharging proteins can impart unusual resilience. Journal of the American Chemical Society. 129: 10110-2. PMID 17665911 DOI: 10.1021/Ja071641Y |
0.65 |
|
| 2005 |
Lawrence MS, Bartel DP. New ligase-derived RNA polymerase ribozymes. Rna (New York, N.Y.). 11: 1173-80. PMID 15987804 DOI: 10.1261/Rna.2110905 |
0.512 |
|
| 2003 |
Lawrence MS, Bartel DP. Processivity of ribozyme-catalyzed RNA polymerization. Biochemistry. 42: 8748-55. PMID 12873135 DOI: 10.1021/Bi034228L |
0.535 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2011 |
Hammerman PS, Sos ML, Ramos AH, Xu C, Dutt A, Zhou W, Brace LE, Woods BA, Lin W, Zhang J, Deng X, Lim SM, Heynck S, Peifer M, Simard JR, ... Lawrence MS, et al. Mutations in the DDR2 kinase gene identify a novel therapeutic target in squamous cell lung cancer. Cancer Discovery. 1: 78-89. PMID 22328973 DOI: 10.1158/2159-8274.Cd-11-0005 |
0.3 |
|
| 2018 |
Bailey MH, Tokheim C, Porta-Pardo E, Sengupta S, Bertrand D, Weerasinghe A, Colaprico A, Wendl MC, Kim J, Reardon B, Ng PK, Jeong KJ, Cao S, Wang Z, Gao J, ... ... Lawrence MS, et al. Comprehensive Characterization of Cancer Driver Genes and Mutations. Cell. 173: 371-385.e18. PMID 29625053 DOI: 10.1016/J.Cell.2018.02.060 |
0.3 |
|
| 2016 |
Kim E, Ilic N, Shrestha Y, Zou L, Kamburov A, Zhu C, Yang X, Lubonja R, Tran N, Nguyen C, Lawrence MS, Piccioni F, Bagul M, Doench JG, Chouinard CR, et al. Systematic functional interrogation of rare cancer variants identifies oncogenic alleles. Cancer Discovery. PMID 27147599 DOI: 10.1158/2159-8290.Cd-16-0160 |
0.297 |
|
| 2023 |
Sanchez A, Ortega P, Sakhtemani R, Manjunath L, Oh S, Bournique E, Becker A, Kim K, Durfee C, Temiz NA, Chen XS, Harris RS, Lawrence MS, Buisson R. Mesoscale DNA Features Impact APOBEC3A and APOBEC3B Deaminase Activity and Shape Tumor Mutational Landscapes. Biorxiv : the Preprint Server For Biology. PMID 37577509 DOI: 10.1101/2023.08.02.551499 |
0.296 |
|
| 2024 |
Sanchez A, Ortega P, Sakhtemani R, Manjunath L, Oh S, Bournique E, Becker A, Kim K, Durfee C, Temiz NA, Chen XS, Harris RS, Lawrence MS, Buisson R. Mesoscale DNA features impact APOBEC3A and APOBEC3B deaminase activity and shape tumor mutational landscapes. Nature Communications. 15: 2370. PMID 38499542 DOI: 10.1038/s41467-024-45909-5 |
0.294 |
|
| 2014 |
Helman E, Lawrence MS, Stewart C, Sougnez C, Getz G, Meyerson M. Somatic retrotransposition in human cancer revealed by whole-genome and exome sequencing. Genome Research. 24: 1053-63. PMID 24823667 DOI: 10.1101/gr.163659.113 |
0.288 |
|
| 2020 |
Rheinbay E, Nielsen MM, Abascal F, Wala JA, Shapira O, Tiao G, Hornshøj H, Hess JM, Juul RI, Lin Z, Feuerbach L, Sabarinathan R, Madsen T, Kim J, Mularoni L, ... ... Lawrence MS, et al. Analyses of non-coding somatic drivers in 2,658 cancer whole genomes. Nature. 578: 102-111. PMID 32025015 DOI: 10.1038/s41586-020-1965-x |
0.288 |
|
| 2016 |
Gibson WJ, Hoivik EA, Halle MK, Taylor-Weiner A, Cherniack AD, Berg A, Holst F, Zack TI, Werner HM, Staby KM, Rosenberg M, Stefansson IM, Kusonmano K, Chevalier A, Mauland KK, ... ... Lawrence MS, et al. The genomic landscape and evolution of endometrial carcinoma progression and abdominopelvic metastasis. Nature Genetics. PMID 27348297 DOI: 10.1038/Ng.3602 |
0.279 |
|
| 2020 |
Karaayvaz-Yildirim M, Silberman RE, Langenbucher A, Saladi SV, Ross KN, Zarcaro E, Desmond A, Yildirim M, Vivekanandan V, Ravichandran H, Mylavagnanam R, Specht MC, Ramaswamy S, Lawrence M, Amon A, et al. Aneuploidy and a deregulated DNA damage response suggest haploinsufficiency in breast tissues of mutation carriers. Science Advances. 6: eaay2611. PMID 32064343 DOI: 10.1126/Sciadv.Aay2611 |
0.275 |
|
| 2022 |
Chen N, Golczer G, Ghose S, Lin B, Langenbucher A, Webb J, Bhanot H, Abt NB, Lin D, Varvares M, Sattler M, Egloff AM, Joh R, Uppaluri R, Emerick KS, ... Lawrence MS, et al. YAP1 maintains active chromatin state in head and neck squamous cell carcinomas that promotes tumorigenesis through cooperation with BRD4. Cell Reports. 39: 110970. PMID 35705032 DOI: 10.1016/j.celrep.2022.110970 |
0.275 |
|
| 2012 |
Pugh TJ, Weeraratne SD, Archer TC, Pomeranz Krummel DA, Auclair D, Bochicchio J, Carneiro MO, Carter SL, Cibulskis K, Erlich RL, Greulich H, Lawrence MS, Lennon NJ, McKenna A, Meldrim J, et al. Medulloblastoma exome sequencing uncovers subtype-specific somatic mutations. Nature. 488: 106-10. PMID 22820256 DOI: 10.1038/Nature11329 |
0.273 |
|
| 2013 |
Tamborero D, Gonzalez-Perez A, Perez-Llamas C, Deu-Pons J, Kandoth C, Reimand J, Lawrence MS, Getz G, Bader GD, Ding L, Lopez-Bigas N. Comprehensive identification of mutational cancer driver genes across 12 tumor types. Scientific Reports. 3: 2650. PMID 24084849 DOI: 10.1038/Srep02650 |
0.273 |
|
| 2010 |
Verhaak RG, Hoadley KA, Purdom E, Wang V, Qi Y, Wilkerson MD, Miller CR, Ding L, Golub T, Mesirov JP, Alexe G, Lawrence M, O'Kelly M, Tamayo P, Weir BA, et al. Integrated genomic analysis identifies clinically relevant subtypes of glioblastoma characterized by abnormalities in PDGFRA, IDH1, EGFR, and NF1. Cancer Cell. 17: 98-110. PMID 20129251 DOI: 10.1016/J.Ccr.2009.12.020 |
0.264 |
|
| 2014 |
Liu J, McCleland M, Stawiski EW, Gnad F, Mayba O, Haverty PM, Durinck S, Chen YJ, Klijn C, Jhunjhunwala S, Lawrence M, Liu H, Wan Y, Chopra V, Yaylaoglu MB, et al. Integrated exome and transcriptome sequencing reveals ZAK isoform usage in gastric cancer. Nature Communications. 5: 3830. PMID 24807215 DOI: 10.1038/Ncomms4830 |
0.264 |
|
| 2019 |
Hess JM, Bernards A, Kim J, Miller M, Taylor-Weiner A, Haradhvala NJ, Lawrence MS, Getz G. Passenger Hotspot Mutations in Cancer. Cancer Cell. 36: 288-301.e14. PMID 31526759 DOI: 10.1016/j.ccell.2019.08.002 |
0.264 |
|
| 2014 |
Crompton BD, Stewart C, Taylor-Weiner A, Alexe G, Kurek KC, Calicchio ML, Kiezun A, Carter SL, Shukla SA, Mehta SS, Thorner AR, de Torres C, Lavarino C, Suñol M, McKenna A, ... ... Lawrence MS, et al. The genomic landscape of pediatric Ewing sarcoma. Cancer Discovery. 4: 1326-41. PMID 25186949 DOI: 10.1158/2159-8290.Cd-13-1037 |
0.263 |
|
| 2014 |
Lohr JG, Stojanov P, Carter SL, Cruz-Gordillo P, Lawrence MS, Auclair D, Sougnez C, Knoechel B, Gould J, Saksena G, Cibulskis K, McKenna A, Chapman MA, Straussman R, Levy J, et al. Widespread genetic heterogeneity in multiple myeloma: implications for targeted therapy. Cancer Cell. 25: 91-101. PMID 24434212 DOI: 10.1016/J.Ccr.2013.12.015 |
0.26 |
|
| 2020 |
Reyna MA, Haan D, Paczkowska M, Verbeke LPC, Vazquez M, Kahraman A, Pulido-Tamayo S, Barenboim J, Wadi L, Dhingra P, Shrestha R, Getz G, Lawrence MS, Pedersen JS, Rubin MA, et al. Pathway and network analysis of more than 2500 whole cancer genomes. Nature Communications. 11: 729. PMID 32024854 DOI: 10.1038/S41467-020-14367-0 |
0.26 |
|
| 2019 |
Ghandi M, Huang FW, Jané-Valbuena J, Kryukov GV, Lo CC, McDonald ER, Barretina J, Gelfand ET, Bielski CM, Li H, Hu K, Andreev-Drakhlin AY, Kim J, Hess JM, Haas BJ, ... ... Lawrence MS, et al. Next-generation characterization of the Cancer Cell Line Encyclopedia. Nature. PMID 31068700 DOI: 10.1038/S41586-019-1186-3 |
0.258 |
|
| 2020 |
Giannikou K, Zhu Z, Kim J, Winden KD, Tyburczy ME, Marron D, Parker JS, Hebert Z, Bongaarts A, Taing L, Long HW, Pisano WV, Alexandrescu S, Godlewski B, Nellist M, ... ... Lawrence MS, et al. Subependymal giant cell astrocytomas are characterized by mTORC1 hyperactivation, a very low somatic mutation rate, and a unique gene expression profile. Modern Pathology : An Official Journal of the United States and Canadian Academy of Pathology, Inc. PMID 33051600 DOI: 10.1038/s41379-020-00659-9 |
0.256 |
|
| 2015 |
Ramos AH, Lichtenstein L, Gupta M, Lawrence MS, Pugh TJ, Saksena G, Meyerson M, Getz G. Oncotator: cancer variant annotation tool. Human Mutation. 36: E2423-9. PMID 25703262 DOI: 10.1002/Humu.22771 |
0.256 |
|
| 2020 |
Lin JJ, Langenbucher A, Gupta P, Yoda S, Fetter IJ, Rooney M, Do A, Kem M, Chang KP, Oh AY, Chin E, Juric D, Corcoran RB, Dagogo-Jack I, Gainor JF, ... ... Lawrence MS, et al. Small cell transformation of fusion-positive lung cancer resistant to ROS1 inhibition. Npj Precision Oncology. 4: 21. PMID 32802958 DOI: 10.1038/s41698-020-0127-9 |
0.254 |
|
| 2014 |
Shankar GM, Taylor-Weiner A, Lelic N, Jones RT, Kim JC, Francis JM, Abedalthagafi M, Borges LF, Coumans JV, Curry WT, Nahed BV, Shin JH, Paek SH, Park SH, Stewart C, ... Lawrence MS, et al. Sporadic hemangioblastomas are characterized by cryptic VHL inactivation. Acta Neuropathologica Communications. 2: 167. PMID 25589003 DOI: 10.1186/S40478-014-0167-X |
0.254 |
|
| 2015 |
Leiserson MD, Vandin F, Wu HT, Dobson JR, Eldridge JV, Thomas JL, Papoutsaki A, Kim Y, Niu B, McLellan M, Lawrence MS, Gonzalez-Perez A, Tamborero D, Cheng Y, Ryslik GA, et al. Pan-cancer network analysis identifies combinations of rare somatic mutations across pathways and protein complexes. Nature Genetics. 47: 106-14. PMID 25501392 DOI: 10.1038/Ng.3168 |
0.25 |
|
| 2021 |
Chung TKH, Doran G, Cheung TH, Yim SF, Yu MY, Worley MJ, Elias KM, Thorner AR, Pedamallu CS, Ojesina AI, Lau KM, Ducar MD, Wong RRY, Wang VW, Nag A, ... ... Lawrence MS, et al. Dissection of Aberration for Cervical Adenocarcinoma Outcomes. Cancers. 13. PMID 34203201 DOI: 10.3390/cancers13133218 |
0.25 |
|
| 2018 |
Bailey MH, Tokheim C, Porta-Pardo E, Sengupta S, Bertrand D, Weerasinghe A, Colaprico A, Wendl MC, Kim J, Reardon B, Kwok-Shing Ng P, Jeong KJ, Cao S, Wang Z, Gao J, ... ... Lawrence MS, et al. Comprehensive Characterization of Cancer Driver Genes and Mutations. Cell. 174: 1034-1035. PMID 30096302 DOI: 10.1016/J.Cell.2018.07.034 |
0.248 |
|
| 2014 |
Kim Y, Hammerman PS, Kim J, Yoon JA, Lee Y, Sun JM, Wilkerson MD, Pedamallu CS, Cibulskis K, Yoo YK, Lawrence MS, Stojanov P, Carter SL, McKenna A, Stewart C, et al. Integrative and comparative genomic analysis of lung squamous cell carcinomas in East Asian patients. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 32: 121-8. PMID 24323028 DOI: 10.1200/Jco.2013.50.8556 |
0.248 |
|
| 2018 |
Hoadley KA, Yau C, Hinoue T, Wolf DM, Lazar AJ, Drill E, Shen R, Taylor AM, Cherniack AD, Thorsson V, Akbani R, Bowlby R, Wong CK, Wiznerowicz M, Sanchez-Vega F, ... ... Lawrence MS, et al. Cell-of-Origin Patterns Dominate the Molecular Classification of 10,000 Tumors from 33 Types of Cancer. Cell. 173: 291-304.e6. PMID 29625048 DOI: 10.1016/J.Cell.2018.03.022 |
0.246 |
|
| 2015 |
van de Wetering M, Francies HE, Francis JM, Bounova G, Iorio F, Pronk A, van Houdt W, van Gorp J, Taylor-Weiner A, Kester L, McLaren-Douglas A, Blokker J, Jaksani S, Bartfeld S, Volckman R, ... ... Lawrence MS, et al. Prospective derivation of a living organoid biobank of colorectal cancer patients. Cell. 161: 933-45. PMID 25957691 DOI: 10.1016/J.Cell.2015.03.053 |
0.246 |
|
| 2014 |
Yuan Y, Van Allen EM, Omberg L, Wagle N, Amin-Mansour A, Sokolov A, Byers LA, Xu Y, Hess KR, Diao L, Han L, Huang X, Lawrence MS, Weinstein JN, Stuart JM, et al. Assessing the clinical utility of cancer genomic and proteomic data across tumor types. Nature Biotechnology. 32: 644-52. PMID 24952901 DOI: 10.1038/Nbt.2940 |
0.241 |
|
| 2019 |
Clarke TL, Tang R, Chakraborty D, Van Rechem C, Ji F, Mishra S, Ma A, Kaniskan HU, Jin J, Lawrence MS, Sadreyev RI, Whetstine JR. Histone Lysine Methylation Dynamics Control EGFR DNA Copy Number Amplification. Cancer Discovery. PMID 31776131 DOI: 10.1158/2159-8290.Cd-19-0463 |
0.241 |
|
| 2018 |
Yoda S, Lin JJ, Lawrence MS, Burke BJ, Friboulet L, Langenbucher A, Dardaei L, Prutisto-Chang K, Dagogo-Jack I, Timofeevski S, Hubbeling H, Gainor JF, Ferris LA, Riley AK, Kattermann KE, et al. Sequential ALK Inhibitors Can Select for Lorlatinib-Resistant Compound ALK Mutations in ALK-Positive Lung Cancer. Cancer Discovery. PMID 29650534 DOI: 10.1158/2159-8290.CD-17-1256 |
0.235 |
|
| 2018 |
Mishra S, Van Rechem C, Pal S, Clarke TL, Chakraborty D, Mahan SD, Black JC, Lawrence MS, Daniels DL, Whetstine JR. Cross-talk between Lysine-Modifying Enzymes Controls Site-Specific DNA Amplifications. Cell. PMID 30057114 DOI: 10.1016/J.Cell.2018.06.018 |
0.233 |
|
| 2017 |
Horn H, Lawrence MS, Chouinard CR, Shrestha Y, Hu JX, Worstell E, Shea E, Ilic N, Kim E, Kamburov A, Kashani A, Hahn WC, Campbell JD, Boehm JS, Getz G, et al. NetSig: network-based discovery from cancer genomes. Nature Methods. PMID 29200198 DOI: 10.1038/Nmeth.4514 |
0.232 |
|
| 2014 |
Brastianos PK, Taylor-Weiner A, Manley PE, Jones RT, Dias-Santagata D, Thorner AR, Lawrence MS, Rodriguez FJ, Bernardo LA, Schubert L, Sunkavalli A, Shillingford N, Calicchio ML, Lidov HG, Taha H, et al. Exome sequencing identifies BRAF mutations in papillary craniopharyngiomas. Nature Genetics. 46: 161-5. PMID 24413733 DOI: 10.1038/Ng.2868 |
0.232 |
|
| 2024 |
Pal Choudhuri S, Girard L, Lim JYS, Wise JF, Freitas B, Yang D, Wong E, Hamilton S, Chien VD, Kim YJ, Gilbreath C, Zhong J, Phat S, Myers DT, Christensen CL, ... ... Lawrence MS, et al. Acquired Cross-resistance in Small Cell Lung Cancer due to Extrachromosomal DNA Amplification of MYC paralogs. Cancer Discovery. PMID 38386926 DOI: 10.1158/2159-8290.CD-23-0656 |
0.229 |
|
| 2013 |
Cleary SP, Jeck WR, Zhao X, Chen K, Selitsky SR, Savich GL, Tan TX, Wu MC, Getz G, Lawrence MS, Parker JS, Li J, Powers S, Kim H, Fischer S, et al. Identification of driver genes in hepatocellular carcinoma by exome sequencing. Hepatology (Baltimore, Md.). 58: 1693-702. PMID 23728943 DOI: 10.1002/Hep.26540 |
0.228 |
|
| 2016 |
Dunford A, Weinstock DM, Savova V, Schumacher SE, Cleary JP, Yoda A, Sullivan TJ, Hess JM, Gimelbrant AA, Beroukhim R, Lawrence MS, Getz G, Lane AA. Tumor-suppressor genes that escape from X-inactivation contribute to cancer sex bias. Nature Genetics. PMID 27869828 DOI: 10.1038/Ng.3726 |
0.224 |
|
| 2015 |
Shukla SA, Rooney MS, Rajasagi M, Tiao G, Dixon PM, Lawrence MS, Stevens J, Lane WJ, Dellagatta JL, Steelman S, Sougnez C, Cibulskis K, Kiezun A, Hacohen N, Brusic V, et al. Comprehensive analysis of cancer-associated somatic mutations in class I HLA genes. Nature Biotechnology. PMID 26372948 DOI: 10.1038/Nbt.3344 |
0.223 |
|
| 2012 |
Greulich H, Kaplan B, Mertins P, Chen TH, Tanaka KE, Yun CH, Zhang X, Lee SH, Cho J, Ambrogio L, Liao R, Imielinski M, Banerji S, Berger AH, Lawrence MS, et al. Functional analysis of receptor tyrosine kinase mutations in lung cancer identifies oncogenic extracellular domain mutations of ERBB2. Proceedings of the National Academy of Sciences of the United States of America. 109: 14476-81. PMID 22908275 DOI: 10.1073/Pnas.1203201109 |
0.221 |
|
| 2014 |
Van Allen EM, Mouw KW, Kim P, Iyer G, Wagle N, Al-Ahmadie H, Zhu C, Ostrovnaya I, Kryukov GV, O'Connor KW, Sfakianos J, Garcia-Grossman I, Kim J, Guancial EA, Bambury R, ... ... Lawrence M, et al. Somatic ERCC2 mutations correlate with cisplatin sensitivity in muscle-invasive urothelial carcinoma. Cancer Discovery. 4: 1140-53. PMID 25096233 DOI: 10.1158/2159-8290.Cd-14-0623 |
0.22 |
|
| 2017 |
Maruvka YE, Mouw KW, Karlic R, Parasuraman P, Kamburov A, Polak P, Haradhvala NJ, Hess JM, Rheinbay E, Brody Y, Koren A, Braunstein LZ, D'Andrea A, Lawrence MS, Bass A, et al. Analysis of somatic microsatellite indels identifies driver events in human tumors. Nature Biotechnology. PMID 28892075 DOI: 10.1038/Nbt.3966 |
0.219 |
|
| 2013 |
Francis JM, Kiezun A, Ramos AH, Serra S, Pedamallu CS, Qian ZR, Banck MS, Kanwar R, Kulkarni AA, Karpathakis A, Manzo V, Contractor T, Philips J, Nickerson E, Pho N, ... ... Lawrence MS, et al. Somatic mutation of CDKN1B in small intestine neuroendocrine tumors. Nature Genetics. 45: 1483-6. PMID 24185511 DOI: 10.1038/Ng.2821 |
0.217 |
|
| 2015 |
Gehring JS, Fischer B, Lawrence M, Huber W. SomaticSignatures: inferring mutational signatures from single-nucleotide variants. Bioinformatics (Oxford, England). PMID 26163694 DOI: 10.1093/Bioinformatics/Btv408 |
0.216 |
|
| 2016 |
Švehlová K, Lawrence MS, Bednárová L, Curtis EA. Altered biochemical specificity of G-quadruplexes with mutated tetrads. Nucleic Acids Research. PMID 27789695 DOI: 10.1093/nar/gkw987 |
0.212 |
|
| 2018 |
Dardaei L, Wang HQ, Singh M, Fordjour P, Shaw KX, Yoda S, Kerr G, Yu K, Liang J, Cao Y, Chen Y, Lawrence MS, Langenbucher A, Gainor JF, Friboulet L, et al. SHP2 inhibition restores sensitivity in ALK-rearranged non-small-cell lung cancer resistant to ALK inhibitors. Nature Medicine. PMID 29505033 DOI: 10.1038/Nm.4497 |
0.209 |
|
| 2014 |
Ojesina AI, Lichtenstein L, Freeman SS, Pedamallu CS, Imaz-Rosshandler I, Pugh TJ, Cherniack AD, Ambrogio L, Cibulskis K, Bertelsen B, Romero-Cordoba S, Treviño V, Vazquez-Santillan K, Guadarrama AS, Wright AA, ... ... Lawrence MS, et al. Landscape of genomic alterations in cervical carcinomas. Nature. 506: 371-5. PMID 24390348 DOI: 10.1038/Nature12881 |
0.208 |
|
| 2013 |
Ramkissoon LA, Horowitz PM, Craig JM, Ramkissoon SH, Rich BE, Schumacher SE, McKenna A, Lawrence MS, Bergthold G, Brastianos PK, Tabak B, Ducar MD, Van Hummelen P, MacConaill LE, Pouissant-Young T, et al. Genomic analysis of diffuse pediatric low-grade gliomas identifies recurrent oncogenic truncating rearrangements in the transcription factor MYBL1. Proceedings of the National Academy of Sciences of the United States of America. 110: 8188-93. PMID 23633565 DOI: 10.1073/Pnas.1300252110 |
0.206 |
|
| 2021 |
Zhang S, Yan C, Millar DG, Yang Q, Heather JM, Langenbucher A, Morton LT, Sepulveda S, Alpert E, Whelton LR, Zarrella DT, Guo M, Minogue E, Lawrence MS, Rueda BR, et al. Antibody-peptide epitope conjugates for personalized cancer therapy. Cancer Research. PMID 34965933 DOI: 10.1158/0008-5472.CAN-21-2200 |
0.202 |
|
| 2019 |
Wise JF, Lawrence MS. Huge whole-genome study of human metastatic cancers. Nature. 575: 60-61. PMID 31690848 DOI: 10.1038/d41586-019-03123-0 |
0.201 |
|
| 2013 |
Verhaak RG, Tamayo P, Yang JY, Hubbard D, Zhang H, Creighton CJ, Fereday S, Lawrence M, Carter SL, Mermel CH, Kostic AD, Etemadmoghadam D, Saksena G, Cibulskis K, Duraisamy S, et al. Prognostically relevant gene signatures of high-grade serous ovarian carcinoma. The Journal of Clinical Investigation. 123: 517-25. PMID 23257362 DOI: 10.1172/Jci65833 |
0.194 |
|
| 2020 |
Lee S, Lawrence M, Love MI. Fluent genomics with and . F1000research. 9: 109. PMID 32528659 DOI: 10.12688/F1000Research.22259.1 |
0.192 |
|
| 2021 |
Faden DL, Kuhs KAL, Lin M, Langenbucher A, Pinheiro M, Yeager M, Cullen M, Boland JF, Steinberg M, Bass S, Lewis JS, Lawrence MS, Ferris RL, Mirabello L. APOBEC Mutagenesis Is Concordant between Tumor and Viral Genomes in HPV-Positive Head and Neck Squamous Cell Carcinoma. Viruses. 13. PMID 34452530 DOI: 10.3390/v13081666 |
0.191 |
|
| 2023 |
Wichroski M, Benci J, Liu SQ, Chupak L, Fang J, Cao C, Wang C, Onorato J, Qiu H, Shan Y, Banas D, Powles R, Locke G, Witt A, Stromko C, ... ... Lawrence M, et al. DGKα/ζ inhibitors combine with PD-1 checkpoint therapy to promote T cell-mediated antitumor immunity. Science Translational Medicine. 15: eadh1892. PMID 37878674 DOI: 10.1126/scitranslmed.adh1892 |
0.188 |
|
| 2022 |
Lin M, Sade-Feldman M, Wirth L, Lawrence MS, Faden DL. Single-cell transcriptomic profiling for inferring tumor origin and mechanisms of therapeutic resistance. Npj Precision Oncology. 6: 71. PMID 36210388 DOI: 10.1038/s41698-022-00314-3 |
0.186 |
|
| 2021 |
Lin JJ, Choudhury NJ, Yoda S, Zhu VW, Johnson TW, Sakhtemani R, Dagogo-Jack I, Digumarthy SR, Lee C, Do A, Peterson J, Prutisto-Chang K, Malik W, Hubbeling H, Langenbucher A, ... ... Lawrence MS, et al. Spectrum of Mechanisms of Resistance to Crizotinib and Lorlatinib in ROS1 Fusion-Positive Lung Cancer. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 33685866 DOI: 10.1158/1078-0432.CCR-21-0032 |
0.185 |
|
| 2020 |
Faden DL, Langenbucher A, Kuhs K, Lewis JS, Mirabello L, Yeager M, Boland JF, Bass S, Steinberg M, Cullen M, Lawrence MS, Ferris RL. HPV+ Oropharyngeal Squamous Cell Carcinomas from patients with two tumors display synchrony of viral genomes yet discordant mutational profiles and signatures. Carcinogenesis. PMID 33075810 DOI: 10.1093/carcin/bgaa111 |
0.185 |
|
| 2023 |
Rheinbay E, Nielsen MM, Abascal F, Wala JA, Shapira O, Tiao G, Hornshøj H, Hess JM, Juul RI, Lin Z, Feuerbach L, Sabarinathan R, Madsen T, Kim J, Mularoni L, ... ... Lawrence MS, et al. Author Correction: Analyses of non-coding somatic drivers in 2,658 cancer whole genomes. Nature. PMID 36697832 DOI: 10.1038/s41586-022-05599-9 |
0.184 |
|
| 2017 |
Zhu LJ, Lawrence M, Gupta A, Pagès H, Kucukural A, Garber M, Wolfe SA. GUIDEseq: a bioconductor package to analyze GUIDE-Seq datasets for CRISPR-Cas nucleases. Bmc Genomics. 18: 379. PMID 28506212 DOI: 10.1186/S12864-017-3746-Y |
0.184 |
|
| 2020 |
Vannam R, Sayilgan J, Ojeda S, Karakyriakou B, Hu E, Kreuzer J, Morris R, Herrera Lopez XI, Rai S, Haas W, Lawrence M, Ott CJ. Targeted degradation of the enhancer lysine acetyltransferases CBP and p300. Cell Chemical Biology. PMID 33400925 DOI: 10.1016/j.chembiol.2020.12.004 |
0.182 |
|
| 2010 |
Cao Y, Yao Z, Sarkar D, Lawrence M, Sanchez GJ, Parker MH, MacQuarrie KL, Davison J, Morgan MT, Ruzzo WL, Gentleman RC, Tapscott SJ. Genome-wide MyoD binding in skeletal muscle cells: a potential for broad cellular reprogramming. Developmental Cell. 18: 662-74. PMID 20412780 DOI: 10.1016/J.Devcel.2010.02.014 |
0.177 |
|
| 2021 |
Koh SB, Ross K, Isakoff SJ, Melkonjan N, He L, Matissek KJ, Schultz A, Mayer EL, Traina TA, Carey LA, Rugo HS, Liu MC, Stearns V, Langenbucher A, Saladi SV, ... ... Lawrence MS, et al. RASAL2 confers collateral MEK/EGFR dependency in chemoresistant triple-negative breast cancer. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 34168046 DOI: 10.1158/1078-0432.CCR-21-0714 |
0.176 |
|
| 2020 |
Dagogo-Jack I, Yoda S, Lennerz JK, Langenbucher A, Lin JJ, Rooney MM, Prutisto-Chang K, Oh A, Adams NA, Yeap BY, Chin E, Do A, Marble HD, Stevens SE, Digumarthy SR, ... ... Lawrence MS, et al. MET Alterations are a Recurring and Actionable Resistance Mechanism in ALK-Positive Lung Cancer. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 32086345 DOI: 10.1158/1078-0432.CCR-19-3906 |
0.176 |
|
| 2012 |
Williams LJ, Tabbaa DG, Li N, Berlin AM, Shea TP, Maccallum I, Lawrence MS, Drier Y, Getz G, Young SK, Jaffe DB, Nusbaum C, Gnirke A. Paired-end sequencing of Fosmid libraries by Illumina. Genome Research. 22: 2241-9. PMID 22800726 DOI: 10.1101/gr.138925.112 |
0.173 |
|
| 2023 |
Zhang J, Simpson CM, Berner J, Chong HB, Fang J, Sahin ZO, Weiss-Sadan T, Possemato AP, Harry S, Takahashi M, Yang TY, Richter M, Patel H, Smith AE, Carlin AD, ... ... Lawrence M, et al. Identification of chemotherapy targets reveals a nucleus-to-mitochondria ROS sensing pathway. Biorxiv : the Preprint Server For Biology. PMID 36945474 DOI: 10.1101/2023.03.11.532189 |
0.173 |
|
| 2016 |
Wu TD, Reeder J, Lawrence M, Becker G, Brauer MJ. GMAP and GSNAP for Genomic Sequence Alignment: Enhancements to Speed, Accuracy, and Functionality. Methods in Molecular Biology (Clifton, N.J.). 1418: 283-334. PMID 27008021 DOI: 10.1007/978-1-4939-3578-9_15 |
0.17 |
|
| 2022 |
Reyna MA, Haan D, Paczkowska M, Verbeke LPC, Vazquez M, Kahraman A, Pulido-Tamayo S, Barenboim J, Wadi L, Dhingra P, Shrestha R, Getz G, Lawrence MS, Pedersen JS, Rubin MA, et al. Author Correction: Pathway and network analysis of more than 2500 whole cancer genomes. Nature Communications. 13: 7566. PMID 36481610 DOI: 10.1038/s41467-022-32334-9 |
0.165 |
|
| 2023 |
Zhang J, Simpson CM, Berner J, Chong HB, Fang J, Ordulu Z, Weiss-Sadan T, Possemato AP, Harry S, Takahashi M, Yang TY, Richter M, Patel H, Smith AE, Carlin AD, ... ... Lawrence M, et al. Systematic identification of anticancer drug targets reveals a nucleus-to-mitochondria ROS-sensing pathway. Cell. PMID 37192619 DOI: 10.1016/j.cell.2023.04.026 |
0.158 |
|
| 2023 |
Qiu D, Xu K, Chung N, Robbins J, Luo R, Lawrence M, He A, Yu F, Alt A, Miller MM, Hangeland J, Feder JN, Seiffert D, Arey BJ. Identification and validation of G protein-coupled receptors modulating flow-dependent signaling pathways in vascular endothelial cells. Frontiers in Molecular Biosciences. 10: 1198079. PMID 37363403 DOI: 10.3389/fmolb.2023.1198079 |
0.153 |
|
| 2016 |
Goldstein LD, Cao Y, Pau G, Lawrence M, Wu TD, Seshagiri S, Gentleman R. Prediction and Quantification of Splice Events from RNA-Seq Data. Plos One. 11: e0156132. PMID 27218464 DOI: 10.1371/Journal.Pone.0156132 |
0.152 |
|
| 2020 |
Wise JF, Nakken S, Steen CB, Vodák D, Trøen G, Johannessen B, Lingjærde OC, Hilden V, Blaker YN, Bai B, Aasheim LB, Pasanen A, Lorenz S, Sveen A, Lothe RA, ... ... Lawrence MS, et al. Mutational dynamics and immune evasion in diffuse large B-cell lymphoma explored in a relapse-enriched patient series. Blood Advances. 4: 1859-1866. PMID 32374878 DOI: 10.1182/bloodadvances.2019001325 |
0.151 |
|
| 2013 |
Lawrence M, Huber W, Pagès H, Aboyoun P, Carlson M, Gentleman R, Morgan MT, Carey VJ. Software for computing and annotating genomic ranges. Plos Computational Biology. 9: e1003118. PMID 23950696 DOI: 10.1371/Journal.Pcbi.1003118 |
0.147 |
|
| 2015 |
Chung TK, Van Hummelen P, Chan PK, Cheung TH, Yim SF, Yu MY, Ducar MD, Thorner AR, MacConaill LE, Doran G, Pedamallu CS, Ojesina AI, Wong RR, Wang VW, Freeman SS, ... ... Lawrence M, et al. Genomic aberrations in cervical adenocarcinomas in Hong Kong Chinese women. International Journal of Cancer. Journal International Du Cancer. 137: 776-83. PMID 25626421 DOI: 10.1002/Ijc.29456 |
0.143 |
|
| 2014 |
Lawrence M, Morgan M. Scalable Genomics with R and Bioconductor. Statistical Science : a Review Journal of the Institute of Mathematical Statistics. 29: 214-226. PMID 28018047 DOI: 10.1214/14-Sts476 |
0.138 |
|
| 2022 |
Bunting MD, Vyas M, Requesens M, Langenbucher A, Schiferle EB, Manguso RT, Lawrence MS, Demehri S. Extracellular matrix proteins regulate NK cell function in peripheral tissues. Science Advances. 8: eabk3327. PMID 35294229 DOI: 10.1126/sciadv.abk3327 |
0.138 |
|
| 2009 |
Lawrence M, Gentleman R, Carey V. rtracklayer: An R package for interfacing with genome browsers Bioinformatics. 25: 1841-1842. PMID 19468054 DOI: 10.1093/Bioinformatics/Btp328 |
0.137 |
|
| 2018 |
Mishra S, Van Rechem C, Pal S, Clarke TL, Chakraborty D, Mahan SD, Black JC, Murphy SE, Lawrence MS, Daniels DL, Whetstine JR. Cross-talk between Lysine-Modifying Enzymes Controls Site-Specific DNA Amplifications. Cell. 175: 1716. PMID 30500540 DOI: 10.1016/j.cell.2018.11.018 |
0.134 |
|
| 2008 |
Lawrence M. Software for the interactive visualisation of experimental data in the genomic context International Journal of Computational Biology and Drug Design. 1: 406-421. PMID 20063465 DOI: 10.1504/Ijcbdd.2008.022210 |
0.134 |
|
| 2017 |
Zheng X, Gogarten SM, Lawrence M, Stilp A, Conomos MP, Weir BS, Laurie C, Levine D. SeqArray - A storage-efficient high-performance data format for WGS variant calls. Bioinformatics (Oxford, England). PMID 28334390 DOI: 10.1093/Bioinformatics/Btx145 |
0.128 |
|
| 2011 |
Anderson CR, Hu X, Zhang H, Tlaxca J, Declèves AE, Houghtaling R, Sharma K, Lawrence M, Ferrara KW, Rychak JJ. Ultrasound molecular imaging of tumor angiogenesis with an integrin targeted microbubble contrast agent. Investigative Radiology. 46: 215-24. PMID 21343825 DOI: 10.1097/Rli.0B013E3182034Fed |
0.126 |
|
| 2021 |
Kumano K, Kanak MA, Saravanan PB, Blanck JP, Liu Y, Vasu S, Lawrence M, Naziruddin B. Withaferin A inhibits lymphocyte proliferation, dendritic cell maturation in vitro and prolongs islet allograft survival. Scientific Reports. 11: 10661. PMID 34021233 DOI: 10.1038/s41598-021-90181-y |
0.125 |
|
| 2019 |
Lee S, Cook D, Lawrence M. plyranges: a grammar of genomic data transformation. Genome Biology. 20: 4. PMID 30609939 DOI: 10.1186/S13059-018-1597-8 |
0.125 |
|
| 2016 |
Campbell JD, Alexandrov A, Kim J, Wala J, Berger AH, Pedamallu CS, Shukla SA, Guo G, Brooks AN, Murray BA, Imielinski M, Hu X, Ling S, Akbani R, Rosenberg M, ... ... Lawrence MS, et al. Distinct patterns of somatic genome alterations in lung adenocarcinomas and squamous cell carcinomas. Nature Genetics. PMID 27158780 DOI: 10.1038/Ng.3564 |
0.124 |
|
| 2013 |
Huntley MA, Larson JL, Chaivorapol C, Becker G, Lawrence M, Hackney JA, Kaminker JS. ReportingTools: an automated result processing and presentation toolkit for high-throughput genomic analyses. Bioinformatics (Oxford, England). 29: 3220-1. PMID 24078713 DOI: 10.1093/Bioinformatics/Btt551 |
0.121 |
|
| 2016 |
Chai N, Swem LR, Reichelt M, Chen-Harris H, Luis E, Park S, Fouts A, Lupardus P, Wu TD, Li O, McBride J, Lawrence M, Xu M, Tan MW. Two Escape Mechanisms of Influenza A Virus to a Broadly Neutralizing Stalk-Binding Antibody. Plos Pathogens. 12: e1005702. PMID 27351973 DOI: 10.1371/Journal.Ppat.1005702 |
0.12 |
|
| 2024 |
Butt Y, Sakhtemani R, Mohamad-Ramshan R, Lawrence MS, Bhagwat AS. Distinguishing preferences of human APOBEC3A and APOBEC3B for cytosines in hairpin loops, and reflection of these preferences in APOBEC-signature cancer genome mutations. Nature Communications. 15: 2369. PMID 38499553 DOI: 10.1038/s41467-024-46231-w |
0.12 |
|
| 2004 |
Khoo S, Gibson TB, Arnette D, Lawrence M, January B, McGlynn K, Vanderbilt CA, Griffen SC, German MS, Cobb MH. MAP kinases and their roles in pancreatic beta-cells. Cell Biochemistry and Biophysics. 40: 191-200. PMID 15289654 DOI: 10.1385/CBB:40:3:191 |
0.118 |
|
| 2015 |
Seiwert TY, Zuo Z, Keck MK, Khattri A, Pedamallu CS, Stricker T, Brown C, Pugh TJ, Stojanov P, Cho J, Lawrence MS, Getz G, Brägelmann J, DeBoer R, Weichselbaum RR, et al. Integrative and comparative genomic analysis of HPV-positive and HPV-negative head and neck squamous cell carcinomas. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 21: 632-41. PMID 25056374 DOI: 10.1158/1078-0432.Ccr-13-3310 |
0.116 |
|
| 2019 |
Kolesnikova S, Srb P, Vrzal L, Lawrence MS, Veverka V, Curtis EA. GTP-dependent formation of multimeric G-quadruplexes. Acs Chemical Biology. PMID 31433157 DOI: 10.1021/acschembio.9b00428 |
0.111 |
|
| 2016 |
Huntley MA, Lou M, Goldstein LD, Lawrence M, Dijkgraaf GJ, Kaminker JS, Gentleman R. Complex regulation of ADAR-mediated RNA-editing across tissues. Bmc Genomics. 17: 61. PMID 26768488 DOI: 10.1186/S12864-015-2291-9 |
0.105 |
|
| 2012 |
Yin T, Cook D, Lawrence M. ggbio: an R package for extending the grammar of graphics for genomic data. Genome Biology. 13: R77. PMID 22937822 DOI: 10.1186/Gb-2012-13-8-R77 |
0.102 |
|
| 2014 |
Obenchain V, Lawrence M, Carey V, Gogarten S, Shannon P, Morgan M. VariantAnnotation: a Bioconductor package for exploration and annotation of genetic variants. Bioinformatics (Oxford, England). 30: 2076-8. PMID 24681907 DOI: 10.1093/Bioinformatics/Btu168 |
0.099 |
|
| 2014 |
Date SV, Modrusan Z, Lawrence M, Morisaki JH, Toy K, Shah IM, Kim J, Park S, Xu M, Basuino L, Chan L, Zeitschel D, Chambers HF, Tan MW, Brown EJ, et al. Global gene expression of methicillin-resistant Staphylococcus aureus USA300 during human and mouse infection. The Journal of Infectious Diseases. 209: 1542-50. PMID 24286981 DOI: 10.1093/Infdis/Jit668 |
0.097 |
|
| 2015 |
Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HC, Davis S, Gatto L, Girke T, Gottardo R, Hahne F, Hansen KD, Irizarry RA, Lawrence M, et al. Orchestrating high-throughput genomic analysis with Bioconductor. Nature Methods. 12: 115-21. PMID 25633503 DOI: 10.1038/Nmeth.3252 |
0.094 |
|
| 2017 |
Lawrence M, Gentleman R. VariantTools: an extensible framework for developing and testing variant callers. Bioinformatics (Oxford, England). 33: 3311-3313. PMID 29028267 DOI: 10.1093/bioinformatics/btx450 |
0.086 |
|
| 2021 |
Liebman C, Loya S, Lawrence M, Bashoo N, Cho M. Stimulatory Responses in α- and β-Cells by Near-Infrared (810 nm) Photobiomodulation. Journal of Biophotonics. e202100257. PMID 34837336 DOI: 10.1002/jbio.202100257 |
0.083 |
|
| 2024 |
Das D, Hirayama S, Aye L, Bryan ME, Naegele S, Zhao B, Efthymiou V, Mendel J, Fisch AS, Kröller L, Michels BE, Waterboer T, Richmon JD, Adalsteinsson V, Lawrence MS, et al. Blood-based screening for HPV-associated cancers. Medrxiv : the Preprint Server For Health Sciences. PMID 38328243 DOI: 10.1101/2024.01.04.24300841 |
0.072 |
|
| 2011 |
Escher BI, Lawrence M, Macova M, Mueller JF, Poussade Y, Robillot C, Roux A, Gernjak W. Evaluation of contaminant removal of reverse osmosis and advanced oxidation in full-scale operation by combining passive sampling with chemical analysis and bioanalytical tools. Environmental Science & Technology. 45: 5387-94. PMID 21612211 DOI: 10.1021/es201153k |
0.069 |
|
| 2020 |
Kumano K, Takita M, Vasu S, Darden C, Lawrence M, Beecherl E, Gupta A, Onaca N, Naziruddin B. Impact of microbial contamination of the islet product during total pancreatectomy with islet autotransplantation. Journal of Hepato-Biliary-Pancreatic Sciences. PMID 31944603 DOI: 10.1002/jhbp.709 |
0.067 |
|
| 2020 |
Yoshimatsu G, Kanak MA, Vasu S, Kumano K, Lawrence M, Onaca N, Takita M, Levy MF, Naziruddin B. Outcomes of Islet Autotransplantation in Chronic Pancreatitis Patients with Complete Acinar Atrophy. Cell Transplantation. 29: 963689720949242. PMID 32878466 DOI: 10.1177/0963689720949242 |
0.065 |
|
| 2022 |
Friesen CL, Lawrence M, Ingram TGJ, Smith MM, Hamilton EA, Holland CW, Neyedli HF, Boe SG. Portable wireless and fibreless fNIRS headband compares favorably to a stationary headcap-based system. Plos One. 17: e0269654. PMID 35834524 DOI: 10.1371/journal.pone.0269654 |
0.064 |
|
| 2019 |
Heidari MD, Lawrence M, Blanchet P, Amor B. Regionalised Life Cycle Assessment of Bio-Based Materials in Construction; the Case of Hemp Shiv Treated with Sol-Gel Coatings. Materials (Basel, Switzerland). 12. PMID 31540180 DOI: 10.3390/ma12182987 |
0.06 |
|
| 2021 |
Bard B, Dodge A, Joyce W, Lawrence M, Cooke SJ, Gilmour KM. Elevated cortisol lowers thermal tolerance but results in limited cardiac remodelling in rainbow trout (Oncorhynchus mykiss) experiencing chronic social stress. The Journal of Experimental Biology. PMID 34096578 DOI: 10.1242/jeb.238683 |
0.058 |
|
| 2014 |
Hartigan EH, Lawrence M, Bisson BM, Torgerson E, Knight RC. Relationship of the functional movement screen in-line lunge to power, speed, and balance measures. Sports Health. 6: 197-202. PMID 24790688 DOI: 10.1177/1941738114522412 |
0.057 |
|
| 2009 |
Buja A, Cook D, Hofmann H, Lawrence M, Lee EK, Swayne DF, Wickham H. Statistical inference for exploratory data analysis and model diagnostics. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 367: 4361-83. PMID 19805449 DOI: 10.1098/Rsta.2009.0120 |
0.054 |
|
| 2021 |
Burdette D, Mirro EA, Lawrence M, Patra SE. Brain-responsive Corticothalamic Stimulation in the Pulvinar Nucleus for the Treatment of Regional Neocortical Epilepsy: A case series. Epilepsia Open. PMID 34268893 DOI: 10.1002/epi4.12524 |
0.054 |
|
| 2023 |
Darden C, Kumano K, Liu Y, Asim M, Mattke J, Lawrence M, Gupta A, Beecherl E, Lee SHS, Naziruddin B. Diffuse calcification of pancreas impairs endocrine function and predicts poor outcome in total pancreatectomy with islet autotransplantation. American Journal of Transplantation : Official Journal of the American Society of Transplantation and the American Society of Transplant Surgeons. PMID 37516245 DOI: 10.1016/j.ajt.2023.07.012 |
0.05 |
|
| 2020 |
Swanson BT, McAuley JA, Lawrence M. Changes in glenohumeral translation, electromyographic activity, and pressure-pain thresholds following sustained or oscillatory mobilizations in stiff and healthy shoulders: Results of a randomized, controlled laboratory trial. Musculoskeletal Science & Practice. 50: 102243. PMID 32871529 DOI: 10.1016/j.msksp.2020.102243 |
0.049 |
|
| 2023 |
Blumberg B, Chang RC, Egusquiza R, Amato A, Li Z, Joloya E, Wheeler H, Nguyen A, Shioda K, Odajima J, Lawrence M, Shioda T. Heritable changes in chromatin contacts linked to transgenerational obesity. Research Square. PMID 38077066 DOI: 10.21203/rs.3.rs-3570919/v1 |
0.049 |
|
| 2018 |
Thoits T, Dutkiewicz A, Raguckas S, Lawrence M, Parker J, Keeley J, Andersen N, VanDyken M, Hatfield-Eldred M. Association Between Dementia Severity and Recommended Lifestyle Changes: A Retrospective Cohort Study. American Journal of Alzheimer's Disease and Other Dementias. 1533317518758785. PMID 29439581 DOI: 10.1177/1533317518758785 |
0.048 |
|
| 2018 |
Chang CA, Murphy K, Kane RR, Lawrence M, Naziruddin B. Early TLR4 blockade attenuates sterile inflammation-mediated stress in islets during isolation and promotes successful transplant outcomes. Transplantation. PMID 29787520 DOI: 10.1097/Tp.0000000000002287 |
0.047 |
|
| 2012 |
Fried D, Lawrence M, Khandani AH, Rosenman J, Cullip T, Chera BS. Is image registration of fluorodeoxyglucose-positron emission tomography/computed tomography for head-and-neck cancer treatment planning necessary? International Journal of Radiation Oncology Biology Physics. 84: 748-754. PMID 22414285 DOI: 10.1016/J.Ijrobp.2011.12.071 |
0.047 |
|
| 2021 |
Gargalovic P, Wong P, Onorato J, Finlay H, Wang T, Yan M, Crain E, St-Onge S, Héroux M, Bouvier M, Xu C, Chen XQ, Generaux C, Lawrence M, Wexler R, et al. In Vitro and In Vivo Evaluation of a Small-Molecule APJ (Apelin Receptor) Agonist, BMS-986224, as a Potential Treatment for Heart Failure. Circulation. Heart Failure. CIRCHEARTFAILURE1200. PMID 33663236 DOI: 10.1161/CIRCHEARTFAILURE.120.007351 |
0.045 |
|
| 2017 |
Lane H, Rose LE, Woodbrey M, Arghavani D, Lawrence M, Cavanaugh JT. Exploring the Effects of Using an Oral Appliance to Reduce Movement Dysfunction in an Individual With Parkinson Disease: A Single-Subject Design Study. Journal of Neurologic Physical Therapy : Jnpt. 41: 52-58. PMID 27977521 DOI: 10.1097/NPT.0000000000000160 |
0.04 |
|
| 2016 |
Lawrence M, Schuster DM. Focal Hepatic Hot Spot From Superior Vena Cava Occlusion Visualized on Ventilation/Perfusion Scintigraphy With Contrast-Enhanced CT Correlate. Clinical Nuclear Medicine. PMID 26825208 DOI: 10.1097/RLU.0000000000001117 |
0.039 |
|
| 2019 |
Hartigan E, Col Eman K, Brooks J, Frisbee A, Lawrence M, Hawke K, Breslen G. Self-assessment during Jump Shot Drills Translates to Decreased Vertical Ground Reaction Forces during Single Limb Drop Jump Landing. International Journal of Sports Physical Therapy. 14: 403-414. PMID 31681499 DOI: 10.26603/Ijspt20190403 |
0.035 |
|
| 2013 |
Lawrence M, Hartigan E, Tu C. Lower limb moments differ when towing a weighted sled with different attachment points. Sports Biomechanics / International Society of Biomechanics in Sports. 12: 186-94. PMID 23898690 DOI: 10.1080/14763141.2012.726639 |
0.033 |
|
| 2018 |
Milionis A, Krishnan KG, Loth E, Lawrence M. Dynamic wetting of human blood and plasma on various surfaces. Colloids and Surfaces. B, Biointerfaces. 166: 218-223. PMID 29597155 DOI: 10.1016/j.colsurfb.2018.03.027 |
0.033 |
|
| 2019 |
Cheskes S, Koh M, Turner L, Heslegrave R, Verbeek R, Dorian P, Scales DC, Singh B, Amlani S, Natarajan M, Morrison LJ, Kakar P, Nowickyj R, Lawrence M, Cameron J, et al. Field Implementation of Remote Ischemic Conditioning in ST-Segment-Elevation Myocardial Infarction: The FIRST Study. The Canadian Journal of Cardiology. PMID 32305146 DOI: 10.1016/j.cjca.2019.11.029 |
0.032 |
|
| 2023 |
Girnis JL, Cavanaugh JT, Baker TC, Duncan RP, Fulford D, LaValley MP, Lawrence M, Nordahl T, Porciuncula F, Rawson KS, Saint-Hilaire M, Thomas CA, Zajac JA, Earhart GM, Ellis TD. Natural Walking Intensity in Persons With Parkinson Disease. Journal of Neurologic Physical Therapy : Jnpt. PMID 37016469 DOI: 10.1097/NPT.0000000000000440 |
0.032 |
|
| 2022 |
Lee Friesen C, Lawrence M, Ingram TGJ, Boe SG. Home-based portable fNIRS-derived cortical laterality correlates with impairment and function in chronic stroke. Frontiers in Human Neuroscience. 16: 1023246. PMID 36569472 DOI: 10.3389/fnhum.2022.1023246 |
0.028 |
|
| 2013 |
Carlson LA, Koch AJ, Lawrence M. Influence of the Flo-Dynamics Movement System intervention on measures of performance in older persons. Clinical Interventions in Aging. 8: 905-11. PMID 23898225 DOI: 10.2147/CIA.S47799 |
0.026 |
|
| 2021 |
Bottiglieri T, Wang X, Arning E, Fernandez H, Wall A, McKenna G, Ruiz R, Onaca N, Trotter J, Lawrence M, Naziruddin B, Asrani SK, Testa G. Longitudinal profiling of plasma and urine metabolites during liver regeneration in living liver donors. Clinical Transplantation. e14490. PMID 34545967 DOI: 10.1111/ctr.14490 |
0.02 |
|
| 2019 |
Angoff GH, O'Connell JJ, Gaeta JM, De Las Nueces D, Lawrence M, Nembang S, Baggett TP. Electronic medical record implementation for a healthcare system caring for homeless people. Jamia Open. 2: 89-98. PMID 31984348 DOI: 10.1093/jamiaopen/ooy046 |
0.02 |
|
| 2010 |
Thompson J, Eaglesham G, Reungoat J, Poussade Y, Bartkow M, Lawrence M, Mueller JF. Removal of PFOS, PFOA and other perfluoroalkyl acids at water reclamation plants in South East Queensland Australia. Chemosphere. 82: 9-17. PMID 21051071 DOI: 10.1016/j.chemosphere.2010.10.040 |
0.018 |
|
| 2007 |
Andersen R, Calder M, Sherman J, Zmrhal G, Lawrence M. Your communication strategy for effective receivables management. Healthcare Financial Management : Journal of the Healthcare Financial Management Association. 61: 1-4. PMID 18186208 |
0.016 |
|
| 2015 |
Miller AB, Cates RG, Lawrence M, Soria JA, Espinoza LV, Martinez JV, Arbizú DA. The antibacterial and antifungal activity of essential oils extracted from Guatemalan medicinal plants. Pharmaceutical Biology. 53: 548-54. PMID 25332067 DOI: 10.3109/13880209.2014.932391 |
0.012 |
|
| 2016 |
Hartigan E, Lawrence M, Murray T, Shaw B, Collins E, Powers K, Townsend J. Biomechanical Profiles When Towing a Sled and Wearing a Weighted Vest Once Cleared for Sports Post-ACL Reconstruction. Sports Health. PMID 27480101 DOI: 10.1177/1941738116659855 |
0.012 |
|
| 2010 |
Bolton K, Zimmerman S, Bloom E, Hunter M, West K, Hunt A, Lawrence M. The enhanced reintegration action plan: the Madigan experience. U.S. Army Medical Department Journal. 38-44. PMID 20091972 |
0.011 |
|
| 2017 |
Hartigan E, Aucoin J, Carlson R, Klieber-Kusak M, Murray T, Shaw B, Lawrence M. Relationships Between Knee Extension Moments During Weighted and Unweighted Gait and Strength Measures That Predict Knee Moments After ACL Reconstruction. Sports Health. 1941738117707758. PMID 28548611 DOI: 10.1177/1941738117707758 |
0.011 |
|
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