Alex H. Wagner, Ph.D.

Affiliations: 
Interdisciplinary Studies University of Iowa, Iowa City, IA 
Area:
Inherited eye disease
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Parents

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Edwin M. Stone grad student 2014 University of Iowa
 (Computational methods for identification of disease-associated variations in exome sequencing.)
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Publications

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Krysiak K, Danos AM, Saliba J, et al. (2022) CIViCdb 2022: evolution of an open-access cancer variant interpretation knowledgebase. Nucleic Acids Research
Horak P, Griffith M, Danos AM, et al. (2022) Standards for the classification of pathogenicity of somatic variants in cancer (oncogenicity): Joint recommendations of Clinical Genome Resource (ClinGen), Cancer Genomics Consortium (CGC), and Variant Interpretation for Cancer Consortium (VICC). Genetics in Medicine : Official Journal of the American College of Medical Genetics. 24: 1991
Horak P, Griffith M, Danos AM, et al. (2022) Standards for the classification of pathogenicity of somatic variants in cancer (oncogenicity): Joint recommendations of Clinical Genome Resource (ClinGen), Cancer Genomics Consortium (CGC), and Variant Interpretation for Cancer Consortium (VICC). Genetics in Medicine : Official Journal of the American College of Medical Genetics
LaHaye S, Fitch JR, Voytovich KJ, et al. (2021) Discovery of clinically relevant fusions in pediatric cancer. Bmc Genomics. 22: 872
Rao S, Pitel B, Wagner AH, et al. (2020) Collaborative, Multidisciplinary Evaluation of Cancer Variants Through Virtual Molecular Tumor Boards Informs Local Clinical Practices. Jco Clinical Cancer Informatics. 4: 602-613
Wagner AH, Walsh B, Mayfield G, et al. (2020) A harmonized meta-knowledgebase of clinical interpretations of somatic genomic variants in cancer. Nature Genetics
Alterovitz G, Heale B, Jones J, et al. (2020) FHIR Genomics: enabling standardization for precision medicine use cases. Npj Genomic Medicine. 5: 13
Wagner AH, Kiwala S, Coffman AC, et al. (2020) CIViCpy: A Python Software Development and Analysis Toolkit for the CIViC Knowledgebase. Jco Clinical Cancer Informatics. 4: 245-253
Horak P, Griffith M, Danos A, et al. (2020) Abstract 5707: A standard operating procedure for the interpretation of oncogenicity/pathogenicity of somatic mutations Cancer Research. 80: 5707-5707
Pitel BA, Rao S, Fitz CDV, et al. (2020) Abstract 3222: The Virtual Molecular Tumor Board of the Variant Interpretation for Cancer Consortium: A systematic gateway connecting cancer genome interpretation and progress in genomic knowledgebases in cancer Cancer Research. 80: 3222-3222
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