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Saveez Saffarian - Publications

2010- Physics and Astronomy University of Utah, Salt Lake City, UT 
General Biophysics, Virology Biology, Materials Science Engineering

19/46 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2014 Tang X, Bendjennat M, Saffarian S. Vesicular stomatitis virus polymerase's strong affinity to its template suggests exotic transcription models. Plos Computational Biology. 10: e1004004. PMID 25501005 DOI: 10.1371/Journal.Pcbi.1004004  1
2014 Ku PI, Bendjennat M, Ballew J, Landesman MB, Saffarian S. ALIX is recruited temporarily into HIV-1 budding sites at the end of gag assembly. Plos One. 9: e96950. PMID 24834918 DOI: 10.1371/Journal.Pone.0096950  1
2014 Hodges JA, Saffarian S. Sample preparation for single virion atomic force microscopy and super-resolution fluorescence imaging. Journal of Visualized Experiments : Jove. e51366. PMID 24429535 DOI: 10.3791/51366  0.84
2013 Hodges J, Tang X, Landesman MB, Ruedas JB, Ghimire A, Gudheti MV, Perrault J, Jorgensen EM, Gerton JM, Saffarian S. Asymmetric packaging of polymerases within vesicular stomatitis virus. Biochemical and Biophysical Research Communications. 440: 271-6. PMID 24055706 DOI: 10.1016/J.Bbrc.2013.09.064  0.01
2011 Collier IE, Legant W, Marmer B, Lubman O, Saffarian S, Wakatsuki T, Elson E, Goldberg GI. Diffusion of MMPs on the surface of collagen fibrils: the mobile cell surface-collagen substratum interface. Plos One. 6: e24029. PMID 21912660 DOI: 10.1371/Journal.Pone.0024029  1
2010 Boucrot E, Saffarian S, Zhang R, Kirchhausen T. Roles of AP-2 in clathrin-mediated endocytosis. Plos One. 5: e10597. PMID 20485680 DOI: 10.1371/Journal.Pone.0010597  1
2010 Thiery J, Keefe D, Saffarian S, Martinvalet D, Walch M, Boucrot E, Kirchhausen T, Lieberman J. Perforin activates clathrin- and dynamin-dependent endocytosis, which is required for plasma membrane repair and delivery of granzyme B for granzyme-mediated apoptosis. Blood. 115: 1582-93. PMID 20038786 DOI: 10.1182/Blood-2009-10-246116  1
2009 Saffarian S, Cocucci E, Kirchhausen T. Distinct dynamics of endocytic clathrin-coated pits and coated plaques. Plos Biology. 7: e1000191. PMID 19809571 DOI: 10.1016/J.Bpj.2008.12.3732  1
2009 Cureton DK, Massol RH, Saffarian S, Kirchhausen TL, Whelan SP. Vesicular stomatitis virus enters cells through vesicles incompletely coated with clathrin that depend upon actin for internalization. Plos Pathogens. 5: e1000394. PMID 19390604 DOI: 10.1371/Journal.Ppat.1000394  0.56
2008 Saffarian S, Kirchhausen T. Differential evanescence nanometry: live-cell fluorescence measurements with 10-nm axial resolution on the plasma membrane. Biophysical Journal. 94: 2333-42. PMID 17993495 DOI: 10.1529/Biophysj.107.117234  1
2007 Saffarian S, Li Y, Elson EL, Pike LJ. Oligomerization of the EGF receptor investigated by live cell fluorescence intensity distribution analysis. Biophysical Journal. 93: 1021-31. PMID 17496034 DOI: 10.1529/Biophysj.107.105494  1
2006 Boucrot E, Saffarian S, Massol R, Kirchhausen T, Ehrlich M. Role of lipids and actin in the formation of clathrin-coated pits. Experimental Cell Research. 312: 4036-48. PMID 17097636 DOI: 10.1016/J.Yexcr.2006.09.025  1
2006 Saffarian S, Qian H, Collier I, Elson E, Goldberg G. Powering a burnt bridges Brownian ratchet: a model for an extracellular motor driven by proteolysis of collagen. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 73: 041909. PMID 16711838 DOI: 10.1103/Physreve.73.041909  1
2005 Chattopadhyay K, Saffarian S, Elson EL, Frieden C. Measuring unfolding of proteins in the presence of denaturant using fluorescence correlation spectroscopy. Biophysical Journal. 88: 1413-22. PMID 15556973 DOI: 10.1529/Biophysj.104.053199  1
2004 Saffarian S, Collier IE, Marmer BL, Elson EL, Goldberg G. Interstitial collagenase is a Brownian ratchet driven by proteolysis of collagen. Science (New York, N.Y.). 306: 108-11. PMID 15459390 DOI: 10.1126/Science.1099179  1
2003 Saffarian S, Elson EL. Statistical analysis of fluorescence correlation spectroscopy: the standard deviation and bias. Biophysical Journal. 84: 2030-42. PMID 12609905 DOI: 10.1016/S0006-3495(03)75011-5  1
2002 Chattopadhyay K, Saffarian S, Elson EL, Frieden C. Measurement of microsecond dynamic motion in the intestinal fatty acid binding protein by using fluorescence correlation spectroscopy. Proceedings of the National Academy of Sciences of the United States of America. 99: 14171-6. PMID 12381795 DOI: 10.1073/Pnas.172524899  1
2002 Qian H, Saffarian S, Elson EL. Concentration fluctuations in a mesoscopic oscillating chemical reaction system. Proceedings of the National Academy of Sciences of the United States of America. 99: 10376-81. PMID 12124397 DOI: 10.1073/Pnas.152007599  1
2001 Collier IE, Saffarian S, Marmer BL, Elson EL, Goldberg G. Substrate recognition by gelatinase A: The C-terminal domain facilitates surface diffusion Biophysical Journal. 81: 2370-2377. PMID 11566806 DOI: 10.1016/S0006-3495(01)75883-3  1
Low-probability matches
2021 Saffarian S. Application of Advanced Light Microscopy to the Study of HIV and Its Interactions with the Host. Viruses. 13. PMID 33535486 DOI: 10.3390/v13020223  0.01
2020 Swann H, Sharma A, Preece B, Peterson A, Eldridge C, Belnap DM, Vershinin M, Saffarian S. Minimal system for assembly of SARS-CoV-2 virus like particles. Scientific Reports. 10: 21877. PMID 33318562 DOI: 10.1038/s41598-020-78656-w  0.01
2020 Gupta S, Bendjennat M, Saffarian S. Abrogating ALIX Interactions Results in Stuttering of the ESCRT Machinery. Viruses. 12. PMID 32948012 DOI: 10.3390/V12091032  0.01
2020 Gupta S, Bromley J, Saffarian S. High-speed imaging of ESCRT recruitment and dynamics during HIV virus like particle budding. Plos One. 15: e0237268. PMID 32886660 DOI: 10.1371/Journal.Pone.0237268  0.01
2020 Saha I, Saffarian S. Dynamics of the HIV Gag Lattice Detected by Localization Correlation Analysis and Time-Lapse iPALM. Biophysical Journal. PMID 32652060 DOI: 10.1016/J.Bpj.2020.06.023  0.01
2019 Saha I, Saffarian S. Interferometric fluorescence cross correlation spectroscopy. Plos One. 14: e0225797. PMID 31851670 DOI: 10.1016/J.Bpj.2019.11.2605  0.01
2019 Bendjennat M, Saffarian S. Fluorescent Protein Inserts in between NC and SP2 are Tolerated for Assembly, Release and Maturation of HIV with Limited Infectivity. Viruses. 11. PMID 31652757 DOI: 10.3390/V11110973  0.01
2018 Pedersen M, Jamali S, Saha I, Daum R, Bendjennat M, Saffarian S. Correlative iPALM and SEM resolves virus cavity and Gag lattice defects in HIV virions. European Biophysics Journal : Ebj. PMID 30043246 DOI: 10.1007/S00249-018-1324-0  0.01
2016 Bendjennat M, Saffarian S. The Race against Protease Activation Defines the Role of ESCRTs in HIV Budding. Plos Pathogens. 12: e1005657. PMID 27280284 DOI: 10.1371/Journal.Ppat.1005657  0.01
2015 Jozi SA, Saffarian S, Shafiee M, Majd NM. Safety, Health, and Environmental Risk Assessment of a Gas Power Plant: A Case Study from Southern Iran Human and Ecological Risk Assessment. 21: 1479-1495. DOI: 10.1080/10807039.2014.957114  0.01
2015 Shafiee M, Saffarian S, Zaredar N. Risk Assessment of Human Activities on Protected Areas: A Case Study Human and Ecological Risk Assessment. 21: 1462-1478. DOI: 10.1080/10807039.2014.956596  0.01
2015 Saffarian S, Shafiee M, Zaredar N. A New Approach Toward Natural and Anthropogenic Risk Assessment of Gas Power Plants Human and Ecological Risk Assessment. 21: 17-36. DOI: 10.1080/10807039.2013.862066  0.01
2014 Saffarian S, Shafiee M, Zaredar N. A Novel Approach Toward Natural and Anthropogenic Risk Assessment of Gas Power Plants Human and Ecological Risk Assessment. 20: 346-365. DOI: 10.1080/10807039.2013.785766  0.01
2014 Tang X, Saffarian S. Mathematical Simulation of Early Transcription Events During VSV Infection Biophysical Journal. 106: 63a. DOI: 10.1016/J.Bpj.2013.11.425  0.01
2013 Ku PI, Miller AK, Ballew J, Sandrin V, Adler FR, Saffarian S. Identification of pauses during formation of HIV-1 virus like particles. Biophysical Journal. 105: 2262-72. PMID 24268138 DOI: 10.1016/J.Bpj.2013.09.047  0.01
2013 Hadipour M, Saffarian S, Shafiee M, Tahmasebi S. Measurement and management of hospital waste in southern Iran: a case study Journal of Material Cycles and Waste Management. 1-6. DOI: 10.1007/s10163-013-0214-x  0.01
2012 Jozi SA, Shafiee M, Moradimajd N, Saffarian S. An integrated Shannon's Entropy-TOPSIS methodology for environmental risk assessment of Helleh protected area in Iran Environmental Monitoring and Assessment. 184: 6913-6922. PMID 22193631 DOI: 10.1007/s10661-011-2468-x  0.01
2012 Jozi SA, Majd NM, Saffarian S, Shafiee M. Evaluation of Almond (Amygdalus Scopartia) Habitat Using Multi-criteria Decision Making Method Journal of the Indian Society of Remote Sensing. 40: 607-617. DOI: 10.1007/s12524-011-0190-3  0.01
2012 Jozi SA, Saffarian S, Shafiee M. Environmental risk assessment of a gas power plant exploitation unit using integrated TOP-EFMEA method Polish Journal of Environmental Studies. 21: 95-105.  0.01
2020 Saha I, Saffarian S. GAG Lattice Dynamics Detected by Time-Lapse and Correlative iPALM Biophysical Journal. 118. DOI: 10.1016/J.Bpj.2019.11.291  0
2016 Tang X, Bendjennat M, Saffarian S. Rapid Long Range Sliding of RNA Dependent RNA Polymerases on Viral Genome Templates Visualized by Photoactivatable Localization Microscopy Biophysical Journal. 110. DOI: 10.1016/J.Bpj.2015.11.1279  0
2016 Ku P, Saffarian S. Regulation of ALIX during Exocytic Vesicle Release and Assembly of ESCRT Proteins on the Plasma Membrane Biophysical Journal. 110: 215. DOI: 10.1016/J.Bpj.2015.11.1196  0
2014 Ku P, Landesman ML, Saffarian S. Alix Arrives Late During HIV-1 Assembly Biophysical Journal. 106. DOI: 10.1016/J.Bpj.2013.11.424  0
2014 Ku P, Hodges J, Landesman ML, Williams P, Tang X, Saffarian S. Proton Permeability of HIV Virus like Particles and Vesicular Stomatitis Virus Biophysical Journal. 106. DOI: 10.1016/J.Bpj.2013.11.423  0
2013 Ku P, Miller A, Saffarian S. Steps within the Assembly of HIV Gag Virus Like Particles Biophysical Journal. 104: 4-6. DOI: 10.1016/J.Bpj.2012.11.2319  0
2013 Hodges JA, Tang X, Landesman M, Ruedas JB, Ghimire A, Perrault J, Gudheti MV, Gerton J, Saffarian S. A Polymerase Super Complex within Vesicular Stomatitis Virus Biophysical Journal. 104: 415a. DOI: 10.1016/J.Bpj.2012.11.2314  0
2012 Hodges J, Ghimire A, Gerton J, Saffarian S. Far Field Fluorescence and AFM Superposition with 10nm Special Resolution Biophysical Journal. 102: 210a. DOI: 10.1016/J.Bpj.2011.11.1145  0
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