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Alexander Bucksch, Dr. - Publications

Affiliations: 
2011 Department of Optical and Laser Remote Sensing Delft University of Technology, Delft, Zuid-Holland, Netherlands 
 2011-2016 School of Biology Georgia Institute of Technology, Altanta, GA, USA, Atlanta, GA, United States 
 2011-2016 School of Interactive Computing Georgia Institute of Technology, Altanta, GA, USA, Atlanta, GA, United States 
 2016-2022 Plant Biology University of Georgia, Athens, Athens, GA, United States 
 2016-2022 Warnell School of Forestry and Natural Resources University of Georgia, Athens, Athens, GA, United States 
 2016-2022 Institute of Bioinformatics University of Georgia, Athens, Athens, GA, United States 
 2023- School of Plant Sciences University of Arizona, Tucson, AZ 
Area:
plant phenotyping
Website:
http://www.computational-plant-science.org/joomla30/
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35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Pietrzyk P, Phan-Udom N, Chutoe C, Pingault L, Roy A, Libault M, Johns Saengwilai P, Bucksch A. DIRT/µ - Automated extraction of root hair traits using combinatorial optimization. Journal of Experimental Botany. PMID 39269014 DOI: 10.1093/jxb/erae385  0.384
2024 Swetnam TL, Antin PB, Bartelme R, Bucksch A, Camhy D, Chism G, Choi I, Cooksey AM, Cosi M, Cowen C, Culshaw-Maurer M, Davey R, Davey S, Devisetty U, Edgin T, et al. CyVerse: Cyberinfrastructure for open science. Plos Computational Biology. 20: e1011270. PMID 38324613 DOI: 10.1371/journal.pcbi.1011270  0.676
2023 Swartz LG, Liu S, Dahlquist D, Kramer ST, Walter ES, McInturf SA, Bucksch A, Mendoza-Cózatl DG. OPEN leaf: an open-source cloud-based phenotyping system for tracking dynamic changes at leaf-specific resolution in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. PMID 37733751 DOI: 10.1111/tpj.16449  0.701
2022 Egea G, Bucksch A, Thygesen LG. Editorial: Innovative use of imaging techniques within plant science. Frontiers in Plant Science. 13: 1079022. PMID 36483954 DOI: 10.3389/fpls.2022.1079022  0.403
2021 Roy A, Bucksch A. Root hairs vs. trichomes: Not everyone is straight! Current Opinion in Plant Biology. 64: 102151. PMID 34864319 DOI: 10.1016/j.pbi.2021.102151  0.724
2021 Liu S, Barrow CS, Hanlon M, Lynch JP, Bucksch A. DIRT/3D: 3D root phenotyping for field-grown maize (Zea mays). Plant Physiology. 187: 739-757. PMID 34608967 DOI: 10.1093/PLPHYS/KIAB311  0.779
2021 Kawa D, Taylor T, Thiombiano B, Musa Z, Vahldick HE, Walmsley A, Bucksch A, Bouwmeester H, Brady SM. Characterization of growth and development of sorghum genotypes with differential susceptibility to Striga hermonthica. Journal of Experimental Botany. PMID 34410382 DOI: 10.1093/jxb/erab380  0.427
2021 Dale R, Oswald S, Jalihal A, LaPorte MF, Fletcher DM, Hubbard A, Shiu SH, Nelson ADL, Bucksch A. Overcoming the Challenges to Enhancing Experimental Plant Biology With Computational Modeling. Frontiers in Plant Science. 12: 687652. PMID 34354723 DOI: 10.3389/fpls.2021.687652  0.378
2021 Schneider HM, Sa Nee Lor V, Hanlon MT, Perkins A, Kaeppler SM, Borkar AN, Bhosale R, Zhang X, Rodriguez J, Bucksch A, Bennett MJ, Brown KM, Lynch JP. Root Angle in Maize Influences Nitrogen Capture and is regulated by CBL-interacting serine/threonine-protein kinase 15 (ZmCIPK15). Plant, Cell & Environment. PMID 34169548 DOI: 10.1111/pce.14135  0.786
2020 Herrero-Huerta M, Bucksch A, Puttonen E, Rainey KM. Canopy Roughness: A New Phenotypic Trait to Estimate Aboveground Biomass from Unmanned Aerial System. Plant Phenomics (Washington, D.C.). 2020: 6735967. PMID 33575668 DOI: 10.34133/2020/6735967  0.471
2020 Salungyu J, Thaitad S, Bucksch A, Kengkanna J, Saengwilai PJ. From lab to field: Open tools facilitating the translation of maize root traits Field Crops Research. 255: 107872. DOI: 10.1016/J.Fcr.2020.107872  0.578
2019 Kengkanna J, Jakaew P, Amawan S, Busener N, Bucksch A, Saengwilai P. Phenotypic variation of cassava root traits and their responses to drought. Applications in Plant Sciences. 7: e01238. PMID 31024782 DOI: 10.1002/Aps3.1238  0.499
2019 Zhan A, Liu J, Yue S, Chen X, Li S, Bucksch A. Architectural and anatomical responses of maize roots to agronomic practices in a semi-arid environment Journal of Plant Nutrition and Soil Science. 182: 751-762. DOI: 10.1002/Jpln.201800560  0.453
2018 Puttonen E, Bucksch A, Zlinszky A, Pfeifer N. Editorial: Optical Approaches to Capture Plant Dynamics in Time, Space, and Across Scales. Frontiers in Plant Science. 9: 791. PMID 29942323 DOI: 10.3389/Fpls.2018.00791  0.423
2017 Friesner J, Assmann SM, Bastow R, Bailey-Serres J, Beynon J, Brendel V, Buell CR, Bucksch A, Busch W, Demura T, Dinneny JR, Doherty CJ, Eveland AL, Falter-Braun P, Gehan MA, et al. The Next Generation of Training for Arabidopsis Researchers: Bioinformatics and Quantitative Biology. Plant Physiology. 175: 1499-1509. PMID 29208732 DOI: 10.1104/Pp.17.01490  0.517
2017 Bucksch A, Atta-Boateng A, Azihou AF, Battogtokh D, Baumgartner A, Binder BM, Braybrook SA, Chang C, Coneva V, DeWitt TJ, Fletcher AG, Gehan MA, Diaz-Martinez DH, Hong L, Iyer-Pascuzzi AS, et al. Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences. Frontiers in Plant Science. 8: 900. PMID 28659934 DOI: 10.3389/Fpls.2017.00900  0.785
2017 Balduzzi M, Binder BM, Bucksch A, Chang C, Hong L, Iyer-Pascuzzi AS, Pradal C, Sparks EE. Reshaping Plant Biology: Qualitative and Quantitative Descriptors for Plant Morphology. Frontiers in Plant Science. 8: 117. PMID 28217137 DOI: 10.3389/Fpls.2017.00117  0.562
2016 Bucksch A, Das A, Schneider H, Merchant N, Weitz JS. Overcoming the Law of the Hidden in Cyberinfrastructures. Trends in Plant Science. PMID 28027865 DOI: 10.1016/J.Tplants.2016.11.014  0.734
2016 Burridge JD, Schneider HM, Huynh BL, Roberts PA, Bucksch A, Lynch JP. Genome-wide association mapping and agronomic impact of cowpea root architecture. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 27864597 DOI: 10.1007/S00122-016-2823-Y  0.668
2016 Burridge J, Jochua CN, Bucksch A, Lynch JP. Legume shovelomics: High-Throughput phenotyping of common bean (Phaseolus vulgaris L.) and cowpea (Vigna unguiculata subsp, unguiculata) root architecture in the field Field Crops Research. 192: 21-32. DOI: 10.1016/J.Fcr.2016.04.008  0.675
2015 Das A, Schneider H, Burridge J, Ascanio AK, Wojciechowski T, Topp CN, Lynch JP, Weitz JS, Bucksch A. Digital imaging of root traits (DIRT): a high-throughput computing and collaboration platform for field-based root phenomics. Plant Methods. 11: 51. PMID 26535051 DOI: 10.1186/S13007-015-0093-3  0.789
2014 Bucksch A. A practical introduction to skeletons for the plant sciences. Applications in Plant Sciences. 2. PMID 25202645 DOI: 10.3732/Apps.1400005  0.567
2014 Bucksch A, Burridge J, York LM, Das A, Nord E, Weitz JS, Lynch JP. Image-based high-throughput field phenotyping of crop roots. Plant Physiology. 166: 470-86. PMID 25187526 DOI: 10.1104/Pp.114.243519  0.806
2014 Das A, Bucksch A, Price CA, Weitz JS. ClearedLeavesDB: an online database of cleared plant leaf images. Plant Methods. 10: 8. PMID 24678985 DOI: 10.1186/1746-4811-10-8  0.768
2014 Bucksch A, Turk G, Weitz JS. The fiber walk: a model of tip-driven growth with lateral expansion. Plos One. 9: e85585. PMID 24465607 DOI: 10.1371/Journal.Pone.0085585  0.742
2014 Bucksch A, Lindenbergh R, Abd Rahman MZ, Menenti M. Breast Height Diameter Estimation From High-Density Airborne LiDAR Data Ieee Geoscience and Remote Sensing Letters. 11: 1056-1060. DOI: 10.1109/Lgrs.2013.2285471  0.761
2013 Topp CN, Iyer-Pascuzzi AS, Anderson JT, Lee CR, Zurek PR, Symonova O, Zheng Y, Bucksch A, Mileyko Y, Galkovskyi T, Moore BT, Harer J, Edelsbrunner H, Mitchell-Olds T, Weitz JS, et al. 3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture. Proceedings of the National Academy of Sciences of the United States of America. 110: E1695-704. PMID 23580618 DOI: 10.1073/Pnas.1304354110  0.803
2013 Bucksch A, Khoshelham K. Localized Registration of Point Clouds of Botanic Trees Ieee Geoscience and Remote Sensing Letters. 10: 631-635. DOI: 10.1109/Lgrs.2012.2216251  0.431
2013 Razak KA, Bucksch A, Straatsma M, Van Westen CJ, Abu Bakar R, De Jong SM. High density airborne lidar estimation of disrupted trees induced by landslides International Geoscience and Remote Sensing Symposium (Igarss). 2617-2620. DOI: 10.1109/IGARSS.2013.6723359  0.277
2012 Galkovskyi T, Mileyko Y, Bucksch A, Moore B, Symonova O, Price CA, Topp CN, Iyer-Pascuzzi AS, Zurek PR, Fang S, Harer J, Benfey PN, Weitz JS. GiA Roots: software for the high throughput analysis of plant root system architecture. Bmc Plant Biology. 12: 116. PMID 22834569 DOI: 10.1186/1471-2229-12-116  0.782
2011 Bucksch A, Fleck S. Automated Detection of Branch Dimensions in Woody Skeletons of Fruit Tree Canopies Photogrammetric Engineering & Remote Sensing. 77: 229-240. DOI: 10.14358/Pers.77.3.229  0.456
2010 Bucksch A, Lindenbergh R, Menenti M. SkelTre The Visual Computer. 26: 1283-1300. DOI: 10.1007/S00371-010-0520-4  0.755
2009 Esme DL, Bucksch A, Beekman WH. Three-dimensional laser imaging as a valuable tool for specifying changes in breast shape after augmentation mammaplasty. Aesthetic Plastic Surgery. 33: 191-5. PMID 18982384 DOI: 10.1007/S00266-008-9259-Y  0.386
2009 Bucksch A, Lindenbergh R, Menenti M, Raman MZ. Skeleton-based botanic tree diameter estimation from dense LiDAR data Proceedings of Spie. 7460: 746007. DOI: 10.1117/12.825997  0.763
2008 Bucksch A, Lindenbergh R. CAMPINO — A skeletonization method for point cloud processing Isprs Journal of Photogrammetry and Remote Sensing. 63: 115-127. DOI: 10.1016/J.Isprsjprs.2007.10.004  0.751
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