William P Bricker, Ph.D. - Publications

Affiliations: 
2009-2014 Energy, Environmental and Chemical Engineering Washington University, Saint Louis, St. Louis, MO 
 2015- Biological Engineering Massachusetts Institute of Technology, Cambridge, MA, United States 

19 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Lee AJ, Rackers JA, Bricker WP. Predicting accurate ab initio DNA electron densities with equivariant neural networks. Biophysical Journal. PMID 36057785 DOI: 10.1016/j.bpj.2022.08.045  0.338
2021 Adendorff MR, Tang GQ, Millar DP, Bathe M, Bricker WP. Computational investigation of the impact of core sequence on immobile DNA four-way junction structure and dynamics. Nucleic Acids Research. PMID 34935970 DOI: 10.1093/nar/gkab1246  0.638
2021 Jun H, Wang X, Parsons MF, Bricker WP, John T, Li S, Jackson S, Chiu W, Bathe M. Rapid prototyping of arbitrary 2D and 3D wireframe DNA origami. Nucleic Acids Research. PMID 34508356 DOI: 10.1093/nar/gkab762  0.727
2019 Jun H, Wang X, Bricker WP, Bathe M. Automated sequence design of 2D wireframe DNA origami with honeycomb edges. Nature Communications. 10: 5419. PMID 31780654 DOI: 10.1038/S41467-019-13457-Y  0.739
2019 Wamhoff EC, Banal JL, Bricker WP, Shepherd TR, Parsons MF, Veneziano R, Stone MB, Jun H, Wang X, Bathe M. Programming Structured DNA Assemblies to Probe Biophysical Processes. Annual Review of Biophysics. 48: 395-419. PMID 31084582 DOI: 10.1146/Annurev-Biophys-052118-115259  0.685
2019 Jun H, Shepherd TR, Zhang K, Bricker WP, Li S, Chiu W, Bathe M. Automated Sequence Design of 3D Polyhedral Wireframe DNA Origami with Honeycomb Edges. Acs Nano. PMID 30605605 DOI: 10.1021/Acsnano.8B08671  0.71
2018 Bricker WP, Banal JL, Stone MB, Bathe M. Molecular model of J-aggregated pseudoisocyanine fibers. The Journal of Chemical Physics. 149: 024905. PMID 30007374 DOI: 10.1063/1.5036656  0.727
2017 Balevičius V, Fox KF, Bricker WP, Jurinovich S, Prandi IG, Mennucci B, Duffy CDP. Fine control of chlorophyll-carotenoid interactions defines the functionality of light-harvesting proteins in plants. Scientific Reports. 7: 13956. PMID 29066753 DOI: 10.1038/S41598-017-13720-6  0.36
2017 Cunningham PD, Bricker WP, Díaz SA, Medintz IL, Bathe M, Melinger JS. Optical determination of the electronic coupling and intercalation geometry of thiazole orange homodimer in DNA. The Journal of Chemical Physics. 147: 055101. PMID 28789556 DOI: 10.1063/1.4995431  0.655
2017 Pan K, Bricker WP, Ratanalert S, Bathe M. Structure and conformational dynamics of scaffolded DNA origami nanoparticles. Nucleic Acids Research. PMID 28482032 DOI: 10.1093/Nar/Gkx378  0.755
2017 Bricker W, Pan K, Bathe M. Multi-Scale Structure and Conformational Dynamics of Scaffolded DNA Origami Nanoparticles Biophysical Journal. 112: 70a-71a. DOI: 10.1016/J.Bpj.2016.11.425  0.662
2015 Shenai PM, Fernandez-Alberti S, Bricker WP, Tretiak S, Zhao Y. Internal Conversion and Vibrational Energy Redistribution in Chlorophyll A. The Journal of Physical Chemistry. B. PMID 26651494 DOI: 10.1021/Acs.Jpcb.5B09548  0.352
2015 Fox KF, Bricker WP, Lo CS, Duffy CD. Distortions of the Xanthophylls Caused by Interactions with Neighbouring Pigments and the LHCII Protein are Crucial for Studying Energy Transfer Pathways within the Complex. The Journal of Physical Chemistry. B. PMID 26618544 DOI: 10.1021/Acs.Jpcb.5B08941  0.708
2015 Bricker WP, Shenai PM, Ghosh A, Liu Z, Enriquez MG, Lambrev PH, Tan HS, Lo CS, Tretiak S, Fernandez-Alberti S, Zhao Y. Non-radiative relaxation of photoexcited chlorophylls: theoretical and experimental study. Scientific Reports. 5: 13625. PMID 26346438 DOI: 10.1038/Srep13625  0.721
2015 Chmeliov J, Bricker WP, Lo C, Jouin E, Valkunas L, Ruban AV, Duffy CD. An 'all pigment' model of excitation quenching in LHCII. Physical Chemistry Chemical Physics : Pccp. 17: 15857-67. PMID 26017055 DOI: 10.1039/C5Cp01905B  0.723
2015 Bricker WP, Lo CS. Efficient pathways of excitation energy transfer from delocalized S2 excitons in the peridinin-chlorophyll a-protein complex. The Journal of Physical Chemistry. B. 119: 5755-64. PMID 25866867 DOI: 10.1021/Jp511766J  0.702
2015 Chmeliov J, Bricker WP, Lo C, Jouin E, Valkunas L, Ruban AV, Duffy CDP. An 'all pigment' model of excitation quenching in LHCII Physical Chemistry Chemical Physics. 17: 15857-15867. DOI: 10.1039/c5cp01905b  0.67
2014 Bricker WP, Lo CS. Excitation energy transfer in the peridinin-chlorophyll a-protein complex modeled using configuration interaction. The Journal of Physical Chemistry. B. 118: 9141-54. PMID 25007401 DOI: 10.1021/Jp5017054  0.728
2013 Kovács SÁ, Bricker WP, Niedzwiedzki DM, Colletti PF, Lo CS. Computational determination of the pigment binding motif in the chlorosome protein a of green sulfur bacteria. Photosynthesis Research. 118: 231-47. PMID 24078352 DOI: 10.1007/S11120-013-9920-4  0.702
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