James Daniel Whitfield - Publications

Affiliations: 
Physics Dartmouth College, Hanover, NH, United States 
Area:
Quantum algorithm, electronic structure, physics of computing
Website:
https://physics.dartmouth.edu/people/james-daniel-whitfield

57 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Gauthier J, Boulain H, van Vugt JJFA, Baudry L, Persyn E, Aury JM, Noel B, Bretaudeau A, Legeai F, Warris S, Chebbi MA, Dubreuil G, Duvic B, Kremer N, Gayral P, ... Whitfield JB, et al. Author Correction: Chromosomal scale assembly of parasitic wasp genome reveals symbiotic virus colonization. Communications Biology. 4: 940. PMID 34331006 DOI: 10.1038/s42003-021-02480-9  0.01
2021 Gauthier J, Boulain H, van Vugt JJFA, Baudry L, Persyn E, Aury JM, Noel B, Bretaudeau A, Legeai F, Warris S, Chebbi MA, Dubreuil G, Duvic B, Kremer N, Gayral P, ... Whitfield JB, et al. Chromosomal scale assembly of parasitic wasp genome reveals symbiotic virus colonization. Communications Biology. 4: 104. PMID 33483589 DOI: 10.1038/s42003-020-01623-8  0.01
2020 Sharanowski BJ, Ridenbaugh RD, Piekarski PK, Broad GR, Burke GR, Deans AR, Lemmon AR, Moriarty Lemmon EC, Diehl GJ, Whitfield JB, Hines HM. Phylogenomics of Ichneumonoidea (Hymenoptera) and implications for evolution of mode of parasitism and viral endogenization. Molecular Phylogenetics and Evolution. 107023. PMID 33253830 DOI: 10.1016/j.ympev.2020.107023  0.01
2020 Kang I, Long KD, Sharkey MJ, Whitfield JB, Lord NP. , a new genus of Cardiochilinae (Hymenoptera, Braconidae), with descriptions of two new species from Malaysia and Vietnam. Zookeys. 971: 1-15. PMID 33061770 DOI: 10.3897/zookeys.971.56571  0.01
2019 Arias-Penna DC, Whitfield JB, Janzen DH, Winifred Hallwachs, Dyer LA, Smith MA, Hebert PDN, Fernández-Triana JL. A species-level taxonomic review and host associations of (Hymenoptera, Braconidae, Microgastrinae) with an emphasis on 136 new reared species from Costa Rica and Ecuador. Zookeys. 890: 1-685. PMID 31798309 DOI: 10.3897/Zookeys.890.35786  0.01
2019 Cameron SA, Whitfield JB. Shift in temporal and spatial expression of gene explains color mimicry in bees. Proceedings of the National Academy of Sciences of the United States of America. 116: 11573-11574. PMID 31164414 DOI: 10.1073/Pnas.1906978116  0.01
2019 Robin S, Ravallec M, Frayssinet M, Whitfield J, Jouan V, Legeai F, Volkoff AN. Evidence for an ichnovirus machinery in parasitoids of coleopteran larvae. Virus Research. PMID 30738799 DOI: 10.1016/J.Virusres.2019.02.001  0.01
2019 Sousa-Lopes BD, Whitfield JB, Salgado-Neto G, Del-Claro K. Cotesia itororensis sp. Nov. From Brazilian savanna: A new reared microgastrine wasp (Hymenoptera: Braconidae) described using an integrative taxonomic approach Zootaxa. 4544: 437-445. PMID 30647251 DOI: 10.11646/Zootaxa.4544.3.9  0.01
2018 Burke GR, Walden KKO, Whitfield JB, Robertson HM, Strand MR. Genome Report: Whole Genome Sequence of the Parasitoid Wasp That Harbors an Endogenous Virus Mutualist. G3 (Bethesda, Md.). PMID 30018085 DOI: 10.1534/G3.118.200308  0.01
2018 Whitfield JB, Jr RJN, Iii RJN. A new species of Cameron (Hymenoptera, Braconidae, Microgastrinae) reared from the hickory horned devil, , and luna moth, , in east Texas. Zookeys. 35-44. PMID 29674887 DOI: 10.3897/zookeys.740.242226  0.01
2018 Sayyari E, Whitfield JB, Mirarab S. DiscoVista: interpretable visualizations of gene tree discordance. Molecular Phylogenetics and Evolution. PMID 29421312 DOI: 10.1016/J.Ympev.2018.01.019  0.01
2017 Whitfield JB, Austin AD, Fernandez-Triana JL. Systematics, Biology, and Evolution of Microgastrine Parasitoid Wasps. Annual Review of Entomology. PMID 29058979 DOI: 10.1146/Annurev-Ento-020117-043405  0.01
2017 Sayyari E, Whitfield JB, Mirarab S. Fragmentary gene sequences negatively impact gene tree and species tree reconstruction. Molecular Biology and Evolution. PMID 29029241 DOI: 10.1093/Molbev/Msx261  0.01
2015 Wang Y, Dolde F, Biamonte J, Babbush R, Bergholm V, Yang S, Jakobi I, Neumann P, Aspuru-Guzik A, Whitfield JD, Wrachtrup J. Quantum Simulation of Helium Hydride Cation in a Solid-State Spin Register. Acs Nano. PMID 25905564 DOI: 10.1021/Acsnano.5B01651  0.72
2014 Fernandez-Triana JL, Whitfield JB, Smith MA, Hallwachs W, Janzen DH. First record of the genus Venanus (Hymenoptera: Braconidae: Microgastrinae) in Mesoamerica, with the description of two new species from Costa Rica. Biodiversity Data Journal. e4167. PMID 25425941 DOI: 10.3897/Bdj.2.E4167  0.01
2014 Fernández-Triana JL, Janzen DH, Hallwachs W, Whitfield JB, Smith MA, Kula R. Revision of the genus Pseudapanteles (Hymenoptera, Braconidae, Microgastrinae), with emphasis on the species in Area de Conservación Guanacaste, northwestern Costa Rica. Zookeys. 1-82. PMID 25349512 DOI: 10.3897/Zookeys.446.8195  0.04
2014 Boussau B, Walton Z, Delgado JA, Collantes F, Beani L, Stewart IJ, Cameron SA, Whitfield JB, Johnston JS, Holland PW, Bachtrog D, Kathirithamby J, Huelsenbeck JP. Strepsiptera, phylogenomics and the long branch attraction problem. Plos One. 9: e107709. PMID 25272037 DOI: 10.1371/Journal.Pone.0107709  0.04
2014 Burke GR, Walden KK, Whitfield JB, Robertson HM, Strand MR. Widespread genome reorganization of an obligate virus mutualist. Plos Genetics. 10: e1004660. PMID 25232843 DOI: 10.1371/Journal.Pgen.1004660  0.04
2014 Arias-Penna DC, Zhang Y, Whitfield JB. First record of the genus Wilkinsonellus (Hymenoptera, Braconidae, Microgastrinae) from Fiji with description of three new species. Zookeys. 25-47. PMID 24715796 DOI: 10.3897/Zookeys.397.7195  0.04
2014 Fernández-Triana JL, Whitfield JB, Rodriguez JJ, Smith MA, Janzen DH, Hallwachs WD, Hajibabaei M, Burns JM, Solis MA, Brown J, Cardinal S, Goulet H, Hebert PD. Review of Apanteles sensu stricto (Hymenoptera, Braconidae, Microgastrinae) from Area de Conservación Guanacaste, northwestern Costa Rica, with keys to all described species from Mesoamerica. Zookeys. 1-565. PMID 24624021 DOI: 10.3897/Zookeys.383.6418  0.04
2014 Whitfield JD, Yung MH, Tempel DG, Boixo S, Aspuru-Guzik A. Computational complexity of time-dependent density functional theory New Journal of Physics. 16. DOI: 10.1088/1367-2630/16/8/083035  0.72
2013 Marsh PM, Wild AL, Whitfield JB. The Doryctinae (Braconidae) of Costa Rica: genera and species of the tribe Heterospilini. Zookeys. 1-474. PMID 24222723 DOI: 10.3897/Zookeys.347.6002  0.01
2013 Wild AL, Marsh PM, Whitfield JB. Fast-evolving homoplastic traits are best for species identification in a group of neotropical wasps. Plos One. 8: e74837. PMID 24040349 DOI: 10.1371/Journal.Pone.0074837  0.04
2013 Fernández-Triana JL, Cardinal S, Whitfield JB, Winnie Hallwachs, Smith MA, Janzenr DH. A review of the New World species of the parasitoid wasp Iconella (Hymenoptera, Braconidae, Microgastrinae). Zookeys. 65-87. PMID 23950690 DOI: 10.3897/Zookeys.321.5160  0.04
2013 Zimborás Z, Faccin M, Kádár Z, Whitfield JD, Lanyon BP, Biamonte J. Quantum transport enhancement by time-reversal symmetry breaking. Scientific Reports. 3: 2361. PMID 23917452 DOI: 10.1038/srep02361  0.72
2013 Arias-Penna DC, Whitfield JB, Janzen DH, Hallwachs W. Three new species in the genus Wilkinsonellus (Braconidae, Microgastrinae) from the Neotropics, and the first host record for the genus. Zookeys. 79-95. PMID 23794899 DOI: 10.3897/Zookeys.302.4962  0.04
2013 Bapteste E, van Iersel L, Janke A, Kelchner S, Kelk S, McInerney JO, Morrison DA, Nakhleh L, Steel M, Stougie L, Whitfield J. Networks: Expanding evolutionary thinking Trends in Genetics. 29: 439-441. PMID 23764187 DOI: 10.1016/J.Tig.2013.05.007  0.04
2013 Hrcek J, Miller SE, Whitfield JB, Shima H, Novotny V. Parasitism rate, parasitoid community composition and host specificity on exposed and semi-concealed caterpillars from a tropical rainforest. Oecologia. 173: 521-32. PMID 23463243 DOI: 10.1007/S00442-013-2619-6  0.04
2013 Whitfield JD, Love PJ, Aspuru-Guzik A. Computational complexity in electronic structure. Physical Chemistry Chemical Physics : Pccp. 15: 397-411. PMID 23172634 DOI: 10.1039/C2Cp42695A  0.72
2012 Whitfield JB, Fernández-Triana JL, Janzen DH, Hallwachs W, Smith MA, Cardinal S. Mariapanteles (Hymenoptera, Braconidae), a new genus of Neotropical microgastrine parasitoid wasp discovered through biodiversity inventory. Zookeys. 61-80. PMID 22859873 DOI: 10.3897/Zookeys.208.3326  0.04
2012 Smith MA, Bertrand C, Crosby K, Eveleigh ES, Fernandez-Triana J, Fisher BL, Gibbs J, Hajibabaei M, Hallwachs W, Hind K, Hrcek J, Huang DW, Janda M, Janzen DH, Li Y, ... Whitfield J, et al. Wolbachia and DNA barcoding insects: patterns, potential, and problems. Plos One. 7: e36514. PMID 22567162 DOI: 10.1371/Journal.Pone.0036514  0.04
2012 Quicke DL, Smith MA, Janzen DH, Hallwachs W, Fernandez-Triana J, Laurenne NM, Zaldívar-Riverón A, Shaw MR, Broad GR, Klopfstein S, Shaw SR, Hrcek J, Hebert PD, Miller SE, Rodriguez JJ, Whitfield JB, et al. Utility of the DNA barcoding gene fragment for parasitic wasp phylogeny (Hymenoptera: Ichneumonoidea): data release and new measure of taxonomic congruence. Molecular Ecology Resources. 12: 676-85. PMID 22487608 DOI: 10.1111/J.1755-0998.2012.03143.X  0.04
2012 Jones NC, Whitfield JD, McMahon PL, Yung MH, Meter RV, Aspuru-Guzik A, Yamamoto Y. Faster quantum chemistry simulation on fault-tolerant quantum computers New Journal of Physics. 14. DOI: 10.1088/1367-2630/14/11/115023  0.72
2012 Li Z, Yung M, Chen H, Lu D, Whitfield JD, Peng X, Aspuru-Guzik A, Du J. Erratum: Solving Quantum Ground-State Problems with Nuclear Magnetic Resonance Scientific Reports. 2: 911. DOI: 10.1038/Srep00911  0.72
2011 Li Z, Yung MH, Chen H, Lu D, Whitfield JD, Peng X, Aspuru-Guzik A, Du J. Solving quantum ground-state problems with nuclear magnetic resonance. Scientific Reports. 1: 88. PMID 22355607 DOI: 10.1038/Srep00088  0.72
2011 Seufferheld MJ, Kim KM, Whitfield J, Valerio A, Caetano-Anollés G. Evolution of vacuolar proton pyrophosphatase domains and volutin granules: Clues into the early evolutionary origin of the acidocalcisome Biology Direct. 6. PMID 21974828 DOI: 10.1186/1745-6150-6-50  0.04
2011 Kassal I, Whitfield JD, Perdomo-Ortiz A, Yung MH, Aspuru-Guzik A. Simulating chemistry using quantum computers. Annual Review of Physical Chemistry. 62: 185-207. PMID 21166541 DOI: 10.1146/Annurev-Physchem-032210-103512  0.72
2011 Whitfield JD, Biamonte J, Aspuru-Guzik A. Simulation of electronic structure Hamiltonians using quantum computers Molecular Physics. 109: 735-750. DOI: 10.1080/00268976.2011.552441  0.72
2011 Biamonte JD, Bergholm V, Whitfield JD, Fitzsimons J, Aspuru-Guzik A. Adiabatic quantum simulators Aip Advances. 1. DOI: 10.1063/1.3598408  0.72
2010 Lanyon BP, Whitfield JD, Gillett GG, Goggin ME, Almeida MP, Kassal I, Biamonte JD, Mohseni M, Powell BJ, Barbieri M, Aspuru-Guzik A, White AG. Towards quantum chemistry on a quantum computer. Nature Chemistry. 2: 106-11. PMID 21124400 DOI: 10.1038/Nchem.483  0.72
2010 Yung MH, Nagaj D, Whitfield JD, Aspuru-Guzik A. Simulation of classical thermal states on a quantum computer: A transfer-matrix approach Physical Review a - Atomic, Molecular, and Optical Physics. 82. DOI: 10.1103/Physreva.82.060302  0.72
2010 Whitfield JD, Rodríguez-Rosario CA, Aspuru-Guzik A. Quantum stochastic walks: A generalization of classical random walks and quantum walks Physical Review a - Atomic, Molecular, and Optical Physics. 81. DOI: 10.1103/Physreva.81.022323  0.72
2009 Janzen DH, Hallwachs W, Blandin P, Burns JM, Cadiou JM, Chacon I, Dapkey T, Deans AR, Epstein ME, Espinoza B, Franclemont JG, Haber WA, Hajibabaei M, Hall JP, Hebert PD, ... Whitfield JB, et al. Integration of DNA barcoding into an ongoing inventory of complex tropical biodiversity. Molecular Ecology Resources. 9: 1-26. PMID 21564960 DOI: 10.1111/J.1755-0998.2009.02628.X  0.04
2009 Grinter CC, Whitfield JB, Connahs H, Dyer LA, Hallwachs W, Janzen DH. A key to new world distatrix mason (Hymenoptera: Braconidae), with descriptions of six new reared neotropical species. Journal of Insect Science (Online). 9: 29. PMID 19619026 DOI: 10.1673/031.009.2901  0.04
2009 Whitfield JB, Rodriguez JJ, Masonick PK. Reared microgastrine wasps (Hymenoptera: Braconidae) from Yanayacu Biological Station and environs (Napo Province, Ecuador): diversity and host specialization. Journal of Insect Science (Online). 9: 31. PMID 19613864 DOI: 10.1673/031.009.3101  0.04
2009 Stoltz DB, Whitfield JB. Virology. Making nice with viruses. Science (New York, N.Y.). 323: 884-5. PMID 19213903 DOI: 10.1126/Science.1169808  0.04
2009 Lanyon BP, Whitfield JD, Gillett GG, Goggin ME, Almeida MP, Kassal I, Biamonte JD, Mohseni M, Powell BJ, Barbieri M, Aspuru-Guzik A, White AG. Quantum chemistry on a quantum computer: First steps and prospects Optics Infobase Conference Papers 0.72
2008 Whitfield JB, Cameron SA, Huson DH, Steel MA. Filtered Z-closure supernetworks for extracting and visualizing recurrent signal from incongruent gene trees. Systematic Biology. 57: 939-47. PMID 19085334 DOI: 10.1080/10635150802552849  0.04
2008 de Boer JG, Ode PJ, Rendahl AK, Vet LE, Whitfield JB, Heimpel GE. Experimental support for multiple-locus complementary sex determination in the parasitoid Cotesia vestalis. Genetics. 180: 1525-35. PMID 18791258 DOI: 10.1534/Genetics.107.083907  0.04
2008 Smith MA, Rodriguez JJ, Whitfield JB, Deans AR, Janzen DH, Hallwachs W, Hebert PD. Extreme diversity of tropical parasitoid wasps exposed by iterative integration of natural history, DNA barcoding, morphology, and collections. Proceedings of the National Academy of Sciences of the United States of America. 105: 12359-64. PMID 18716001 DOI: 10.1073/Pnas.0805319105  0.04
2008 Murphy N, Banks JC, Whitfield JB, Austin AD. Phylogeny of the parasitic microgastroid subfamilies (Hymenoptera: Braconidae) based on sequence data from seven genes, with an improved time estimate of the origin of the lineage. Molecular Phylogenetics and Evolution. 47: 378-95. PMID 18325792 DOI: 10.1016/J.Ympev.2008.01.022  0.04
2008 Whitfield JB, Kjer KM. Ancient rapid radiations of insects: challenges for phylogenetic analysis. Annual Review of Entomology. 53: 449-72. PMID 17877448 DOI: 10.1146/Annurev.Ento.53.103106.093304  0.04
2007 Lapointe R, Tanaka K, Barney WE, Whitfield JB, Banks JC, Béliveau C, Stoltz D, Webb BA, Cusson M. Genomic and morphological features of a banchine polydnavirus: comparison with bracoviruses and ichnoviruses. Journal of Virology. 81: 6491-501. PMID 17428854 DOI: 10.1128/Jvi.02702-06  0.04
2007 Whitfield JB, Lockhart PJ. Deciphering ancient rapid radiations. Trends in Ecology & Evolution. 22: 258-65. PMID 17300853 DOI: 10.1016/J.Tree.2007.01.012  0.04
2006 Banks JC, Whitfield JB. Dissecting the ancient rapid radiation of microgastrine wasp genera using additional nuclear genes. Molecular Phylogenetics and Evolution. 41: 690-703. PMID 16854601 DOI: 10.1016/J.Ympev.2006.06.001  0.04
2003 Whitfield JB. Phylogenetic insights into the evolution of parasitism in hymenoptera. Advances in Parasitology. 54: 69-100. PMID 14711084 DOI: 10.1016/S0065-308X(03)54002-7  0.04
2003 Whitfield JB, Asgari S. Virus or not? Phylogenetics of polydnaviruses and their wasp carriers. Journal of Insect Physiology. 49: 397-405. PMID 12770619 DOI: 10.1016/S0022-1910(03)00057-X  0.04
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