Hari Muddana, Ph.D. - Publications

Affiliations: 
2010 Pennsylvania State University, State College, PA, United States 
Area:
General Biophysics, Biomedical Engineering, Biomechanics Biophysics

14/28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Ahmed D, Lu M, Nourhani A, Lammert PE, Stratton Z, Muddana HS, Crespi VH, Huang TJ. Selectively manipulable acoustic-powered microswimmers. Scientific Reports. 5: 9744. PMID 25993314 DOI: 10.1038/srep09744  0.8
2014 Ahmed D, Muddana HS, Lu M, French JB, Ozcelik A, Fang Y, Butler PJ, Benkovic SJ, Manz A, Huang TJ. Acoustofluidic chemical waveform generator and switch. Analytical Chemistry. 86: 11803-10. PMID 25405550 DOI: 10.1021/ac5033676  0.8
2013 Huang C, Butler PJ, Tong S, Muddana HS, Bao G, Zhang S. Substrate stiffness regulates cellular uptake of nanoparticles. Nano Letters. 13: 1611-5. PMID 23484640 DOI: 10.1021/nl400033h  0.8
2013 Sengupta S, Dey KK, Muddana HS, Tabouillot T, Ibele ME, Butler PJ, Sen A. Enzyme molecules as nanomotors. Journal of the American Chemical Society. 135: 1406-14. PMID 23308365 DOI: 10.1021/ja3091615  0.8
2013 Ahmed D, Chan CY, Lin SC, Muddana HS, Nama N, Benkovic SJ, Huang TJ. Tunable, pulsatile chemical gradient generation via acoustically driven oscillating bubbles. Lab On a Chip. 13: 328-31. PMID 23254861 DOI: 10.1039/c2lc40923b  0.8
2012 Muddana HS, Chiang HH, Butler PJ. Tuning membrane phase separation using nonlipid amphiphiles. Biophysical Journal. 102: 489-97. PMID 22325271 DOI: 10.1016/j.bpj.2011.12.033  0.8
2011 Tabouillot T, Muddana HS, Butler PJ. Endothelial Cell Membrane Sensitivity to Shear Stress is Lipid Domain Dependent. Cellular and Molecular Bioengineering. 4: 169-181. PMID 22247740 DOI: 10.1007/s12195-010-0136-9  0.8
2011 Muddana HS, Gullapalli RR, Manias E, Butler PJ. Atomistic simulation of lipid and DiI dynamics in membrane bilayers under tension. Physical Chemistry Chemical Physics : Pccp. 13: 1368-78. PMID 21152516 DOI: 10.1039/c0cp00430h  0.8
2010 Khanna P, Yunkunis T, Muddana HS, Peng HH, August A, Dong C. p38 MAP kinase is necessary for melanoma-mediated regulation of VE-cadherin disassembly. American Journal of Physiology. Cell Physiology. 298: C1140-50. PMID 20181932 DOI: 10.1152/ajpcell.00242.2009  0.8
2010 Muddana HS, Sengupta S, Mallouk TE, Sen A, Butler PJ. Substrate catalysis enhances single-enzyme diffusion. Journal of the American Chemical Society. 132: 2110-1. PMID 20108965 DOI: 10.1021/ja908773a  0.8
2009 Muddana HS, Morgan TT, Adair JH, Butler PJ. Photophysics of Cy3-encapsulated calcium phosphate nanoparticles. Nano Letters. 9: 1559-66. PMID 19260707 DOI: 10.1021/nl803658w  0.8
2009 Tabouillot T, Muddana HS, Butler PJ. Shear stress induces time- and domain- dependent changes in lipid dynamics of endothelial cell membranes Proceedings of the Asme Summer Bioengineering Conference 2009, Sbc2009. 105-106. DOI: 10.1115/SBC2009-206882  0.8
2009 Muddana HS, Gullapalli RR, Butler PJ. Tension induces changes in lipid lateral diffusion in model fluid-phase membranes Proceedings of the Asme Summer Bioengineering Conference 2009, Sbc2009. 1171-1172. DOI: 10.1115/SBC2009-206867  0.8
2008 Morgan TT, Muddana HS, Altinoglu EI, Rouse SM, Tabaković A, Tabouillot T, Russin TJ, Shanmugavelandy SS, Butler PJ, Eklund PC, Yun JK, Kester M, Adair JH. Encapsulation of organic molecules in calcium phosphate nanocomposite particles for intracellular imaging and drug delivery. Nano Letters. 8: 4108-15. PMID 19367837 DOI: 10.1021/nl8019888  0.8
Low-probability matches
2018 Yin J, Henriksen NM, Muddana HS, Gilson MK. Bind3P: Optimization of a Water Model Based on Host-Guest Binding Data. Journal of Chemical Theory and Computation. PMID 29874074 DOI: 10.1021/acs.jctc.8b00318  0.01
2016 Muddana HS, Sapra NV, Fenley AT, Gilson MK. Erratum: "The electrostatic response of water to neutral polar solutes: Implications for continuum solvent modeling" [J. Chem. Phys. 138, 224504 (2013)]. The Journal of Chemical Physics. 145: 049902. PMID 27475401 DOI: 10.1063/1.4960037  0.01
2014 Fenley AT, Muddana HS, Gilson MK. Calculation and visualization of atomistic mechanical stresses in nanomaterials and biomolecules. Plos One. 9: e113119. PMID 25503996 DOI: 10.1371/journal.pone.0113119  0.01
2014 Fenley AT, Henriksen NM, Muddana HS, Gilson MK. Bridging Calorimetry and Simulation through Precise Calculations of Cucurbituril-Guest Binding Enthalpies. Journal of Chemical Theory and Computation. 10: 4069-4078. PMID 25221445 DOI: 10.1021/ct5004109  0.01
2014 Li A, Muddana HS, Gilson MK. Quantum Mechanical Calculation of Noncovalent Interactions: A Large-Scale Evaluation of PMx, DFT, and SAPT Approaches. Journal of Chemical Theory and Computation. 10: 1563-1575. PMID 24803867 DOI: 10.1021/ct401111c  0.01
2014 Muddana HS, Fenley AT, Mobley DL, Gilson MK. The SAMPL4 host-guest blind prediction challenge: an overview. Journal of Computer-Aided Molecular Design. 28: 305-17. PMID 24599514 DOI: 10.1007/s10822-014-9735-1  0.01
2014 Muddana HS, Yin J, Sapra NV, Fenley AT, Gilson MK. Blind prediction of SAMPL4 cucurbit[7]uril binding affinities with the mining minima method. Journal of Computer-Aided Molecular Design. 28: 463-74. PMID 24510191 DOI: 10.1007/s10822-014-9726-2  0.01
2014 Muddana HS, Sapra NV, Fenley AT, Gilson MK. The SAMPL4 hydration challenge: evaluation of partial charge sets with explicit-water molecular dynamics simulations. Journal of Computer-Aided Molecular Design. 28: 277-87. PMID 24477800 DOI: 10.1007/s10822-014-9714-6  0.01
2013 Muddana HS, Sapra NV, Fenley AT, Gilson MK. The electrostatic response of water to neutral polar solutes: implications for continuum solvent modeling. The Journal of Chemical Physics. 138: 224504. PMID 23781802 DOI: 10.1063/1.4808376  0.01
2012 Fenley AT, Muddana HS, Gilson MK. Entropy-enthalpy transduction caused by conformational shifts can obscure the forces driving protein-ligand binding. Proceedings of the National Academy of Sciences of the United States of America. 109: 20006-11. PMID 23150595 DOI: 10.1073/pnas.1213180109  0.01
2012 Muddana HS, Gilson MK. Calculation of Host-Guest Binding Affinities Using a Quantum-Mechanical Energy Model. Journal of Chemical Theory and Computation. 8: 2023-2033. PMID 22737045 DOI: 10.1021/ct3002738  0.01
2012 Muddana HS, Varnado CD, Bielawski CW, Urbach AR, Isaacs L, Geballe MT, Gilson MK. Blind prediction of host-guest binding affinities: a new SAMPL3 challenge. Journal of Computer-Aided Molecular Design. 26: 475-87. PMID 22366955 DOI: 10.1007/s10822-012-9554-1  0.01
2012 Muddana HS, Gilson MK. Prediction of SAMPL3 host-guest binding affinities: evaluating the accuracy of generalized force-fields. Journal of Computer-Aided Molecular Design. 26: 517-25. PMID 22274835 DOI: 10.1007/s10822-012-9544-3  0.01
2006 Muddana HS, Guntupalli JS, Polapragada C. Elimination of indirect regulatory interactions in gene network inference 2006 Ieee International Workshop On Genomic Signal Processing and Statistics, Gensips 2006. 79-80. DOI: 10.1109/GENSIPS.2006.353165  0.01
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