| Year |
Citation |
Score |
| 2024 |
Comlekoglu T, Dzamba BJ, Pacheco GG, Shook DR, Sego TJ, Glazier JA, Peirce SM, DeSimone DW. Modeling the roles of cohesotaxis, cell-intercalation, and tissue geometry in collective cell migration of Xenopus mesendoderm. Biology Open. 13. PMID 39162010 DOI: 10.1242/bio.060615 |
0.824 |
|
| 2023 |
Comlekoglu T, Dzamba BJ, Pacheco GG, Shook DR, Sego TJ, Glazier JA, Peirce SM, DeSimone DW. Modeling the roles of cohesotaxis, cell-intercalation, and tissue geometry in collective cell migration of mesendoderm. Biorxiv : the Preprint Server For Biology. PMID 37904937 DOI: 10.1101/2023.10.16.562601 |
0.824 |
|
| 2023 |
Sego TJ, Comlekoglu T, Peirce SM, Desimone DW, Glazier JA. General, open-source vertex modeling in biological applications using Tissue Forge. Scientific Reports. 13: 17886. PMID 37857673 DOI: 10.1038/s41598-023-45127-x |
0.791 |
|
| 2023 |
Sego TJ, Comlekoglu T, Peirce SM, Desimone D, Glazier JA. General, Open-Source Vertex Modeling in Biological Applications Using Tissue Forge. Research Square. PMID 37214822 DOI: 10.21203/rs.3.rs-2886960/v1 |
0.791 |
|
| 2022 |
Shook DR, Wen JWH, Rolo A, O'Hanlon M, Francica B, Dobbins D, Skoglund P, DeSimone DW, Winklbauer R, Keller RE. Characterization of convergent thickening, a major convergence force producing morphogenic movement in amphibians. Elife. 11. PMID 35404236 DOI: 10.7554/eLife.57642 |
0.784 |
|
| 2021 |
Watanabe H, Belyea BC, Paxton RL, Li M, Dzamba BJ, DeSimone DW, Gomez RA, Sequeira-Lopez MLS. The Renin Cell Baroreceptor, A Nuclear Mechanotransducer Central for Homeostasis. Circulation Research. PMID 33993729 DOI: 10.1161/CIRCRESAHA.120.318711 |
0.782 |
|
| 2018 |
Dzamba BJ, DeSimone DW. Extracellular Matrix (ECM) and the Sculpting of Embryonic Tissues. Current Topics in Developmental Biology. 130: 245-274. PMID 29853179 DOI: 10.1016/Bs.Ctdb.2018.03.006 |
0.849 |
|
| 2017 |
Sonavane PR, Wang C, Dzamba B, Weber GF, Periasamy A, DeSimone DW. Mechanical and signaling roles for keratin intermediate filaments in the assembly and morphogenesis of mesendoderm tissue at gastrulation. Development (Cambridge, England). PMID 28982683 DOI: 10.1242/Dev.155200 |
0.822 |
|
| 2014 |
Rozario T, Mead PE, DeSimone DW. Diverse functions of kindlin/fermitin proteins during embryonic development in Xenopus laevis. Mechanisms of Development. 133: 203-17. PMID 25173804 DOI: 10.1016/J.Mod.2014.07.004 |
0.814 |
|
| 2014 |
DeSimone DW, Horwitz AR. Cell Biology. Many modes of motility. Science (New York, N.Y.). 345: 1002-3. PMID 25170137 DOI: 10.1126/Science.1259176 |
0.45 |
|
| 2014 |
Bjerke MA, Dzamba BJ, Wang C, DeSimone DW. FAK is required for tension-dependent organization of collective cell movements in Xenopus mesendoderm. Developmental Biology. 394: 340-56. PMID 25127991 DOI: 10.1016/J.Ydbio.2014.07.023 |
0.837 |
|
| 2012 |
Xu G, Wei S, White JM, DeSimone DW. Identification and characterization of ADAM41, a novel ADAM metalloproteinase in Xenopus. The International Journal of Developmental Biology. 56: 333-9. PMID 22811267 DOI: 10.1387/Ijdb.113444Gx |
0.771 |
|
| 2012 |
Batra N, Burra S, Siller-Jackson AJ, Gu S, Xia X, Weber GF, DeSimone D, Bonewald LF, Lafer EM, Sprague E, Schwartz MA, Jiang JX. Mechanical stress-activated integrin α5β1 induces opening of connexin 43 hemichannels. Proceedings of the National Academy of Sciences of the United States of America. 109: 3359-64. PMID 22331870 DOI: 10.1073/Pnas.1115967109 |
0.705 |
|
| 2012 |
Wei S, Xu G, Bridges LC, Williams P, Nakayama T, Shah A, Grainger RM, White JM, DeSimone DW. Roles of ADAM13-regulated Wnt activity in early Xenopus eye development. Developmental Biology. 363: 147-54. PMID 22227340 DOI: 10.1016/J.Ydbio.2011.12.031 |
0.771 |
|
| 2012 |
Weber GF, Bjerke MA, DeSimone DW. A mechanoresponsive cadherin-keratin complex directs polarized protrusive behavior and collective cell migration. Developmental Cell. 22: 104-15. PMID 22169071 DOI: 10.1016/J.Devcel.2011.10.013 |
0.836 |
|
| 2011 |
Schwarzbauer JE, DeSimone DW. Fibronectins, their fibrillogenesis, and in vivo functions. Cold Spring Harbor Perspectives in Biology. 3. PMID 21576254 DOI: 10.1101/Cshperspect.A005041 |
0.631 |
|
| 2011 |
Weber GF, Bjerke MA, DeSimone DW. Integrins and cadherins join forces to form adhesive networks. Journal of Cell Science. 124: 1183-93. PMID 21444749 DOI: 10.1242/Jcs.064618 |
0.841 |
|
| 2011 |
Weber G, Bjerke MA, DeSimone DW. Erratum: Integrins and cadherins join forces to form adhesive networks Journal of Cell Science. 124. DOI: 10.1242/Jcs.091074 |
0.638 |
|
| 2010 |
Wei S, Xu G, Bridges LC, Williams P, White JM, DeSimone DW. ADAM13 induces cranial neural crest by cleaving class B Ephrins and regulating Wnt signaling. Developmental Cell. 19: 345-52. PMID 20708595 DOI: 10.1016/J.Devcel.2010.07.012 |
0.796 |
|
| 2010 |
Wei S, Whittaker CA, Xu G, Bridges LC, Shah A, White JM, Desimone DW. Conservation and divergence of ADAM family proteins in the Xenopus genome. Bmc Evolutionary Biology. 10: 211. PMID 20630080 DOI: 10.1186/1471-2148-10-211 |
0.767 |
|
| 2010 |
Rozario T, DeSimone DW. The extracellular matrix in development and morphogenesis: a dynamic view. Developmental Biology. 341: 126-40. PMID 19854168 DOI: 10.1016/J.Ydbio.2009.10.026 |
0.845 |
|
| 2009 |
Dzamba BJ, Jakab KR, Marsden M, Schwartz MA, DeSimone DW. Cadherin adhesion, tissue tension, and noncanonical Wnt signaling regulate fibronectin matrix organization. Developmental Cell. 16: 421-32. PMID 19289087 DOI: 10.1016/J.Devcel.2009.01.008 |
0.84 |
|
| 2009 |
Rozario T, Dzamba B, Weber GF, Davidson LA, DeSimone DW. The physical state of fibronectin matrix differentially regulates morphogenetic movements in vivo. Developmental Biology. 327: 386-98. PMID 19138684 DOI: 10.1016/J.Ydbio.2008.12.025 |
0.825 |
|
| 2008 |
Davidson LA, Dzamba BD, Keller R, Desimone DW. Live imaging of cell protrusive activity, and extracellular matrix assembly and remodeling during morphogenesis in the frog, Xenopus laevis. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 237: 2684-92. PMID 18629871 DOI: 10.1002/Dvdy.21600 |
0.829 |
|
| 2008 |
Schwartz MA, DeSimone DW. Cell adhesion receptors in mechanotransduction. Current Opinion in Cell Biology. 20: 551-6. PMID 18583124 DOI: 10.1016/J.Ceb.2008.05.005 |
0.667 |
|
| 2008 |
Cousin H, Desimone DW, Alfandari D. PACSIN2 regulates cell adhesion during gastrulation in Xenopus laevis. Developmental Biology. 319: 86-99. PMID 18495106 DOI: 10.1016/J.Ydbio.2008.04.007 |
0.827 |
|
| 2007 |
Thorne BC, Bailey AM, DeSimone DW, Peirce SM. Agent-based modeling of multicell morphogenic processes during development. Birth Defects Research. Part C, Embryo Today : Reviews. 81: 344-53. PMID 18228259 DOI: 10.1002/Bdrc.20106 |
0.399 |
|
| 2007 |
Robertson SH, Smith CK, Langhans AL, McLinden SE, Oberhardt MA, Jakab KR, Dzamba B, DeSimone DW, Papin JA, Peirce SM. Multiscale computational analysis of Xenopus laevis morphogenesis reveals key insights of systems-level behavior. Bmc Systems Biology. 1: 46. PMID 17953751 DOI: 10.1186/1752-0509-1-46 |
0.823 |
|
| 2007 |
DeSimone DW, Dzamba B, Davidson LA. Using Xenopus embryos to investigate integrin function. Methods in Enzymology. 426: 403-14. PMID 17697893 DOI: 10.1016/S0076-6879(07)26017-3 |
0.833 |
|
| 2006 |
Davidson LA, Marsden M, Keller R, Desimone DW. Integrin alpha5beta1 and fibronectin regulate polarized cell protrusions required for Xenopus convergence and extension. Current Biology : Cb. 16: 833-44. PMID 16682346 DOI: 10.1016/J.Cub.2006.03.038 |
0.829 |
|
| 2005 |
DeSimone DW, Davidson L, Marsden M, Alfandari D. The Xenopus embryo as a model system for studies of cell migration. Methods in Molecular Biology (Clifton, N.J.). 294: 235-45. PMID 15576916 DOI: 10.1385/1-59259-860-9:235 |
0.835 |
|
| 2004 |
Davidson LA, Keller R, DeSimone DW. Assembly and remodeling of the fibrillar fibronectin extracellular matrix during gastrulation and neurulation in Xenopus laevis. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 231: 888-95. PMID 15517579 DOI: 10.1002/Dvdy.20217 |
0.819 |
|
| 2004 |
Longo D, Peirce SM, Skalak TC, Davidson L, Marsden M, Dzamba B, DeSimone DW. Multicellular computer simulation of morphogenesis: blastocoel roof thinning and matrix assembly in Xenopus laevis. Developmental Biology. 271: 210-22. PMID 15196962 DOI: 10.1016/J.Ydbio.2004.03.021 |
0.828 |
|
| 2004 |
Davidson LA, Keller R, DeSimone D. Patterning and tissue movements in a novel explant preparation of the marginal zone of Xenopus laevis. Gene Expression Patterns : Gep. 4: 457-66. PMID 15183313 DOI: 10.1016/J.Modgep.2004.01.001 |
0.8 |
|
| 2003 |
Alfandari D, Cousin H, Gaultier A, Hoffstrom BG, DeSimone DW. Integrin alpha5beta1 supports the migration of Xenopus cranial neural crest on fibronectin. Developmental Biology. 260: 449-64. PMID 12921745 DOI: 10.1016/S0012-1606(03)00277-X |
0.824 |
|
| 2003 |
Marsden M, DeSimone DW. Integrin-ECM interactions regulate cadherin-dependent cell adhesion and are required for convergent extension in Xenopus. Current Biology : Cb. 13: 1182-91. PMID 12867028 DOI: 10.1016/S0960-9822(03)00433-0 |
0.856 |
|
| 2003 |
Na J, Marsden M, DeSimone DW. Differential regulation of cell adhesive functions by integrin alpha subunit cytoplasmic tails in vivo. Journal of Cell Science. 116: 2333-43. PMID 12711704 DOI: 10.1242/Jcs.00445 |
0.815 |
|
| 2002 |
Smith KM, Gaultier A, Cousin H, Alfandari D, White JM, DeSimone DW. The cysteine-rich domain regulates ADAM protease function in vivo. The Journal of Cell Biology. 159: 893-902. PMID 12460986 DOI: 10.1083/Jcb.200206023 |
0.787 |
|
| 2002 |
Davidson LA, Hoffstrom BG, Keller R, DeSimone DW. Mesendoderm extension and mantle closure in Xenopus laevis gastrulation: combined roles for integrin alpha(5)beta(1), fibronectin, and tissue geometry. Developmental Biology. 242: 109-29. PMID 11820810 DOI: 10.1006/Dbio.2002.0537 |
0.81 |
|
| 2001 |
Marsden M, DeSimone DW. Regulation of cell polarity, radial intercalation and epiboly in Xenopus: Novel roles for integrin and fibronectin Development. 128: 3635-3647. PMID 11566866 |
0.503 |
|
| 2001 |
Alfandari D, Cousin H, Gaultier A, Smith K, White JM, Darribère T, DeSimone DW. Xenopus ADAM 13 is a metalloprotease required for cranial neural crest-cell migration Current Biology. 11: 918-930. PMID 11448768 DOI: 10.1016/S0960-9822(01)00263-9 |
0.846 |
|
| 2000 |
Lallier TE, DeSimone DW. Separation of neural induction and neurulation in xenopus Developmental Biology. 225: 135-150. PMID 10964470 DOI: 10.1006/Dbio.2000.9833 |
0.419 |
|
| 2000 |
Cohen MW, Hoffstrom BG, DeSimone DW. Active zones on motor nerve terminals contain alpha 3beta 1 integrin. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 20: 4912-21. PMID 10864949 |
0.711 |
|
| 2000 |
Cohen MW, Hoffstrom BG, DeSimone DW. Active Zones on Motor Nerve Terminals Contain α3β1 Integrin The Journal of Neuroscience. 20: 4912-4921. DOI: 10.1523/Jneurosci.20-13-04912.2000 |
0.727 |
|
| 1998 |
Whittaker CA, Desimone DW. Molecular cloning and developmental expression of the Xenopus homolog of integrin α4a Annals of the New York Academy of Sciences. 857: 56-73. PMID 9917832 DOI: 10.1111/J.1749-6632.1998.Tb10107.X |
0.654 |
|
| 1998 |
Urry LA, Whittaker CA, Duquette M, Lawler J, DeSimone DW. Thrombospondins in early Xenopus embryos: Dynamic patterns of expression suggest diverse roles in nervous system, notochord, and muscle development Developmental Dynamics. 211: 390-407. PMID 9566958 DOI: 10.1002/(Sici)1097-0177(199804)211:4<390::Aid-Aja10>3.0.Co;2-8 |
0.652 |
|
| 1997 |
Meng F, Whittaker CA, Ransom DG, DeSimone DW. Cloning and characterization of cDNAs encoding the integrin α2 and α3 subunits from Xenopus laevis Mechanisms of Development. 67: 141-155. PMID 9392512 DOI: 10.1016/S0925-4773(97)00108-1 |
0.774 |
|
| 1997 |
Alfandari D, Wolfsberg TG, White JM, DeSimone DW. ADAM 13: A novel ADAM expressed in somitic mesoderm and neural crest cells during Xenopus laevis development Developmental Biology. 182: 314-330. PMID 9070330 DOI: 10.1006/Dbio.1996.8458 |
0.777 |
|
| 1997 |
Desimone DW, Ramos JW, Hoffstromi EG, Kateeshock SJ, Hens MD. Spatial regulation of integr1n adhesive function in early development Faseb Journal. 11. |
0.436 |
|
| 1996 |
Alfandari D, Ramos J, Clavilier L, DeSimone DW, Darribère T. The RGD-dependent and the Hep II binding domains of fibronectin govern the adhesive behaviors of amphibian embryonic cells Mechanisms of Development. 56: 83-92. PMID 8798149 DOI: 10.1016/0925-4773(96)00513-8 |
0.839 |
|
| 1996 |
Ramos JW, Whittaker CA, DeSimone DW. Integrin-dependent adhesive activity is spatially controlled by inductive signals at gastrulation Development. 122: 2873-2883. PMID 8787760 |
0.472 |
|
| 1996 |
Ramos JW, DeSimone DW. Xenopus embryonic cell adhesion to fibronectin: Position-specific activation of RGD/synergy site-dependent migratory behavior at gastrulation Journal of Cell Biology. 134: 227-240. PMID 8698817 DOI: 10.1083/Jcb.134.1.227 |
0.756 |
|
| 1995 |
Hens MD, DeSimone DW. Molecular analysis and developmental expression of the focal adhesion kinase pp125FAK in Xenopus laevis Developmental Biology. 170: 274-288. PMID 7649362 DOI: 10.1006/Dbio.1995.1214 |
0.477 |
|
| 1995 |
Alfandari D, Whittaker CA, Desimone DW, Darribère T. Integrin αv subunit is expressed on mesodermal cell surfaces during amphibian gastrulation Developmental Biology. 170: 249-261. PMID 7649360 DOI: 10.1006/Dbio.1995.1212 |
0.797 |
|
| 1995 |
Joos TO, Whittaker CA, Meng F, DeSimone DW, Gnau V, Hausen P. Integrin α5 during early development of Xenopus laevis Mechanisms of Development. 50: 187-199. PMID 7619730 DOI: 10.1016/0925-4773(94)00335-K |
0.733 |
|
| 1994 |
DeSimone DW. Adhesion and matrix in vertebrate development Current Opinion in Cell Biology. 6: 747-751. PMID 7833054 DOI: 10.1016/0955-0674(94)90103-1 |
0.497 |
|
| 1993 |
Lawler J, Duquette M, Whittaker CA, Adams JC, McHenry K, DeSimone DW. Identification and characterization of thrombospondin-4, a new member of the thrombospondin gene family Journal of Cell Biology. 120: 1059-1067. PMID 8432726 DOI: 10.1083/Jcb.120.4.1059 |
0.575 |
|
| 1993 |
Ransom DG, Hens MD, DeSimone DW. Integrin expression in early amphibian embryos: CDNA cloning and characterization of Xenopus β1, β2, β3, and β6 subunits Developmental Biology. 160: 265-275. PMID 7693527 DOI: 10.1006/Dbio.1993.1304 |
0.738 |
|
| 1992 |
DeSimone DW, Norton PA, Hynes RO. Identification and characterization of alternatively spliced fibronectin mRNAs expressed in early Xenopus embryos Developmental Biology. 149: 357-369. PMID 1730390 DOI: 10.1016/0012-1606(92)90291-N |
0.547 |
|
| 1992 |
Johnson KE, Boucaut JC, DeSimone DW. Role of the extracellular matrix in amphibian gastrulation Current Topics in Developmental Biology. 27: 91-127. PMID 1424768 DOI: 10.1016/S0070-2153(08)60533-5 |
0.463 |
|
| 1991 |
Desimone DW, Johnson KE. Chapter 27 The Xenopus Embryo as a Model System for the Study of Cell-Extracellular Matrix Interactions Methods in Cell Biology. 36: 527-539. PMID 1811150 DOI: 10.1016/S0091-679X(08)60295-2 |
0.493 |
|
| 1987 |
DeSimone DW, Stepp MA, Patel RS, Hynes RO. The integrin family of cell surface receptors Biochemical Society Transactions. 15: 789-791. PMID 2826269 DOI: 10.1042/Bst0150789A |
0.527 |
|
| 1986 |
DeSimone DW, Spiegel M. Concanavalin A and wheat germ agglutinin binding to sea urchin embryo basal laminae. Roux's Archives of Developmental Biology : the Official Organ of the Edbo. 195: 433-444. PMID 28305405 DOI: 10.1007/BF00375747 |
0.689 |
|
| 1986 |
Tamkun JW, DeSimone DW, Fonda D, Patel RS, Buck C, Horwitz AF, Hynes RO. Structure of integrin, a glycoprotein involved in the transmembrane linkage between fibronectin and actin. Cell. 46: 271-82. PMID 3487386 DOI: 10.1016/0092-8674(86)90744-0 |
0.529 |
|
| 1986 |
DeSimone DW, Spiegel M. Wheat germ agglutinin binding to the micromeres and primary mesenchyme cells of sea urchin embryos Developmental Biology. 114: 336-346. DOI: 10.1016/0012-1606(86)90198-3 |
0.702 |
|
| 1986 |
DeSimone DW, Spiegel M. Concanavalin A and wheat germ agglutinin binding to sea urchin embryo basal laminae Roux's Archives of Developmental Biology. 195: 433-444. DOI: 10.1007/BF00375747 |
0.689 |
|
| 1985 |
DeSimone DW, Spiegel E, Spiegel M. The biochemical identification of fibronectin in the sea urchin embryo Biochemical and Biophysical Research Communications. 133: 183-188. PMID 4074361 DOI: 10.1016/0006-291X(85)91858-3 |
0.668 |
|
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