Donovan P. German - Publications

Affiliations: 
University of California, Irvine, Irvine, CA 
Area:
Ecological Physiology, Fishes, Microbes

46 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Le N, Heras J, Herrera MJ, German DP, Crummett LT. The genome of Anoplarchus purpurescens (Stichaeidae) reflects its carnivorous diet. Molecular Genetics and Genomics : Mgg. PMID 37690047 DOI: 10.1007/s00438-023-02067-5  0.755
2023 Rankins DR, Herrera MJ, Christensen MP, Chen A, Hood NZ, Heras J, German DP. When digestive physiology doesn't match "diet": Lumpenus sagitta (Stichaeidae) is an "omnivore" with a carnivorous gut. Comparative Biochemistry and Physiology. Part a, Molecular & Integrative Physiology. 285: 111508. PMID 37625480 DOI: 10.1016/j.cbpa.2023.111508  0.725
2023 Wehrle BA, German DP. Reptilian digestive efficiency: Past, present, and future. Comparative Biochemistry and Physiology. Part a, Molecular & Integrative Physiology. 111369. PMID 36646309 DOI: 10.1016/j.cbpa.2023.111369  0.77
2022 Pham T, Hong HC, Swig B, German DP, Connor KM. Elevated aerial temperature modulates digestive enzyme activities in Mytilus californianus. Comparative Biochemistry and Physiology. Part B, Biochemistry & Molecular Biology. 265: 110825. PMID 36572236 DOI: 10.1016/j.cbpb.2022.110825  0.59
2022 Lemieux-Labonté V, Vigliotti C, Tadic Z, Wehrle B, Lopez P, Bapteste E, Lapointe FJ, German DP, Herrel A. Proximate Drivers of Population-Level Lizard Gut Microbial Diversity: Impacts of Diet, Insularity, and Local Environment. Microorganisms. 10. PMID 36013968 DOI: 10.3390/microorganisms10081550  0.796
2022 Leigh SC, Catabay C, German DP. Sustained changes in digestive physiology and microbiome across sequential generations of zebrafish fed different diets. Comparative Biochemistry and Physiology. Part a, Molecular & Integrative Physiology. 111285. PMID 35961610 DOI: 10.1016/j.cbpa.2022.111285  0.806
2022 Frederick AR, Lee AM, Wehrle BA, Catabay CC, Rankins DR, Clements KD, German DP. Abalone under moderate heat stress have elevated metabolic rates and changes to digestive enzyme activities. Comparative Biochemistry and Physiology. Part a, Molecular & Integrative Physiology. 111230. PMID 35537602 DOI: 10.1016/j.cbpa.2022.111230  0.737
2022 Herrera MJ, Heras J, German DP. Comparative transcriptomics reveal tissue level specialization towards diet in prickleback fishes. Journal of Comparative Physiology. B, Biochemical, Systemic, and Environmental Physiology. PMID 35076747 DOI: 10.1007/s00360-021-01426-1  0.777
2021 Frederick AR, Heras J, Friedman CS, German DP. Withering syndrome induced gene expression changes and a de-novo transcriptome for the Pinto abalone, Haliotis kamtschatkana. Comparative Biochemistry and Physiology. Part D, Genomics & Proteomics. 41: 100930. PMID 34837736 DOI: 10.1016/j.cbd.2021.100930  0.734
2021 Leigh SC, Summers AP, Hoffmann SL, German DP. Shark spiral intestines may operate as Tesla valves. Proceedings. Biological Sciences. 288: 20211359. PMID 34284626 DOI: 10.1098/rspb.2021.1359  0.785
2020 Wehrle BA, Herrel A, Nguyen-Phuc BQ, Maldonado S, Dang RK, Agnihotri R, Tadić Z, German DP. Rapid Dietary Shift in Resulted in Localized Changes in Gut Function. Physiological and Biochemical Zoology : Pbz. 93: 396-415. PMID 32783702 DOI: 10.1086/709848  0.782
2020 McCauley M, German DP, Lujan NK, Jackson CR. Gut microbiomes of sympatric Amazonian wood-eating catfishes (Loricariidae) reflect host identity and little role in wood digestion. Ecology and Evolution. 10: 7117-7128. PMID 32760516 DOI: 10.1002/Ece3.6413  0.457
2020 Heras J, Chakraborty M, Emerson JJ, German DP. Genomic and biochemical evidence of dietary adaptation in a marine herbivorous fish. Proceedings. Biological Sciences. 287: 20192327. PMID 32070255 DOI: 10.1098/Rspb.2019.2327  0.486
2020 Nguyen‐Phuc B, Demetropoulos C, Stewart S, Saffarinia P, Salgado JB, Hawkins E, Frederick AR, German DP. Nutritional physiology of the Santa Ana sucker ( Catostomus santaanae ): A threatened freshwater fish endemic to Southern California Acta Zoologica. DOI: 10.1111/Azo.12320  0.798
2018 Leigh SC, Papastamatiou YP, German DP. Seagrass digestion by a notorious 'carnivore'. Proceedings. Biological Sciences. 285. PMID 30185641 DOI: 10.1098/Rspb.2018.1583  0.798
2018 Santos AJ, Frederick AR, Higgins BA, Carrillo A, Carter AL, Dickson KA, German DP, Horn MH. The beach-spawning California grunion Leuresthes tenuis eats and digests conspecific eggs. Journal of Fish Biology. PMID 29956315 DOI: 10.1111/Jfb.13734  0.78
2017 Leigh SC, Nguyen-Phuc BQ, German DP. The effects of protein and fiber content on gut structure and function in zebrafish (Danio rerio). Journal of Comparative Physiology. B, Biochemical, Systemic, and Environmental Physiology. PMID 28916914 DOI: 10.1007/S00360-017-1122-5  0.812
2017 German DP, Raven DA, Aguilar-Roca N. Floating Fishes: An Activity Investigating Overfishing, Buoyancy & Gas Compressibility The American Biology Teacher. 79: 49-54. DOI: 10.1525/Abt.2017.79.1.49  0.353
2017 Leigh SC, Papastamatiou Y, German DP. The nutritional physiology of sharks Reviews in Fish Biology and Fisheries. 27: 561-585. DOI: 10.1007/S11160-017-9481-2  0.8
2016 Connor KM, Sung A, Garcia NS, Gracey AY, German DP. Modulation of digestive physiology and biochemistry in Mytilus californianus in response to feeding level acclimation and microhabitat. Biology Open. PMID 27402963 DOI: 10.1242/Bio.019430  0.657
2016 German DP, Foti DM, Heras J, Amerkhanian H, Lockwood BL. Elevated Gene Copy Number Does Not Always Explain Elevated Amylase Activities in Fishes. Physiological and Biochemical Zoology : Pbz. 89: 277-93. PMID 27327179 DOI: 10.1086/687288  0.368
2016 Clements KD, German DP, Piché J, Tribollet A, Choat JH. Integrating ecological roles and trophic diversification on coral reefs: multiple lines of evidence identify parrotfishes as microphages Biological Journal of the Linnean Society. 120: 729-751. DOI: 10.1111/Bij.12914  0.467
2015 Jhaveri P, Papastamatiou YP, German DP. Digestive enzyme activities in the guts of bonnethead sharks (Sphyrna tiburo) provide insight into their digestive strategy and evidence for microbial digestion in their hindguts. Comparative Biochemistry and Physiology. Part a, Molecular & Integrative Physiology. 189: 76-83. PMID 26239220 DOI: 10.1016/J.Cbpa.2015.07.013  0.456
2015 German DP, Sung A, Jhaveri P, Agnihotri R. More than one way to be an herbivore: convergent evolution of herbivory using different digestive strategies in prickleback fishes (Stichaeidae). Zoology (Jena, Germany). 118: 161-70. PMID 25769813 DOI: 10.1016/J.Zool.2014.12.002  0.542
2015 Sullam KE, Dalton CM, Russell JA, Kilham SS, El-Sabaawi R, German DP, Flecker AS. Changes in digestive traits and body nutritional composition accommodate a trophic niche shift in Trinidadian guppies. Oecologia. 177: 245-57. PMID 25430044 DOI: 10.1007/S00442-014-3158-5  0.534
2014 German DP, Gawlicka AK, Horn MH. Evolution of ontogenetic dietary shifts and associated gut features in prickleback fishes (Teleostei: Stichaeidae). Comparative Biochemistry and Physiology. Part B, Biochemistry & Molecular Biology. 168: 12-8. PMID 24269211 DOI: 10.1016/J.Cbpb.2013.11.006  0.705
2014 Kim KH, Horn MH, Sosa AE, German DP. Sequence and expression of an α-amylase gene in four related species of prickleback fishes (Teleostei: Stichaeidae): ontogenetic, dietary, and species-level effects. Journal of Comparative Physiology. B, Biochemical, Systemic, and Environmental Physiology. 184: 221-34. PMID 24136006 DOI: 10.1007/S00360-013-0780-1  0.646
2014 Allison SD, Chacon SS, German DP. Substrate concentration constraints on microbial decomposition Soil Biology and Biochemistry. 79: 43-49. DOI: 10.1016/J.Soilbio.2014.08.021  0.336
2013 Alster CJ, German DP, Lu Y, Allison SD. Microbial enzymatic responses to drought and to nitrogen addition in a southern California grassland Soil Biology and Biochemistry. 64: 68-79. DOI: 10.1016/J.Soilbio.2013.03.034  0.373
2012 German DP, Marcelo KRB, Stone MM, Allison SD. The Michaelis-Menten kinetics of soil extracellular enzymes in response to temperature: A cross-latitudinal study Global Change Biology. 18: 1468-1479. DOI: 10.1111/J.1365-2486.2011.02615.X  0.308
2011 German DP, Chacon SS, Allison SD. Substrate concentration and enzyme allocation can affect rates of microbial decomposition. Ecology. 92: 1471-80. PMID 21870621 DOI: 10.1890/10-2028.1  0.325
2011 Day RD, German DP, Manjakasy JM, Farr I, Hansen MJ, Tibbetts IR. Enzymatic digestion in stomachless fishes: how a simple gut accommodates both herbivory and carnivory. Journal of Comparative Physiology. B, Biochemical, Systemic, and Environmental Physiology. 181: 603-13. PMID 21212962 DOI: 10.1007/S00360-010-0546-Y  0.524
2011 Day RD, German DP, Tibbetts IR. Why can't young fish eat plants? Neither digestive enzymes nor gut development preclude herbivory in the young of a stomachless marine herbivorous fish. Comparative Biochemistry and Physiology. Part B, Biochemistry & Molecular Biology. 158: 23-9. PMID 20884371 DOI: 10.1016/J.Cbpb.2010.09.010  0.487
2011 Lujan NK, German DP, Winemiller KO. Do wood-grazing fishes partition their niche?: Morphological and isotopic evidence for trophic segregation in Neotropical Loricariidae Functional Ecology. 25: 1327-1338. DOI: 10.1111/J.1365-2435.2011.01883.X  0.427
2011 German DP, Weintraub MN, Grandy AS, Lauber CL, Rinkes ZL, Allison SD. Optimization of hydrolytic and oxidative enzyme methods for ecosystem studies Soil Biology and Biochemistry. 43: 1387-1397. DOI: 10.1016/J.Soilbio.2011.03.017  0.324
2010 German DP, Nagle BC, Villeda JM, Ruiz AM, Thomson AW, Contreras Balderas S, Evans DH. Evolution of herbivory in a carnivorous clade of minnows (teleostei: cyprinidae): effects on gut size and digestive physiology. Physiological and Biochemical Zoology : Pbz. 83: 1-18. PMID 19929637 DOI: 10.1086/648510  0.643
2010 German DP, Neuberger DT, Callahan MN, Lizardo NR, Evans DH. Feast to famine: The effects of food quality and quantity on the gut structure and function of a detritivorous catfish (Teleostei: Loricariidae). Comparative Biochemistry and Physiology. Part a, Molecular & Integrative Physiology. 155: 281-93. PMID 19854287 DOI: 10.1016/J.Cbpa.2009.10.018  0.599
2010 German DP, Miles RD. Stable carbon and nitrogen incorporation in blood and fin tissue of the catfish Pterygoplichthys disjunctivus (Siluriformes, Loricariidae) Environmental Biology of Fishes. 89: 117-133. DOI: 10.1007/S10641-010-9703-0  0.339
2009 German DP, Bittong RA. Digestive enzyme activities and gastrointestinal fermentation in wood-eating catfishes. Journal of Comparative Physiology. B, Biochemical, Systemic, and Environmental Physiology. 179: 1025-42. PMID 19568757 DOI: 10.1007/S00360-009-0383-Z  0.5
2009 German DP. Inside the guts of wood-eating catfishes: can they digest wood? Journal of Comparative Physiology. B, Biochemical, Systemic, and Environmental Physiology. 179: 1011-23. PMID 19562350 DOI: 10.1007/S00360-009-0381-1  0.514
2009 German DP. Do herbivorous minnows have "plug-flow reactor" guts? Evidence from digestive enzyme activities, gastrointestinal fermentation, and luminal nutrient concentrations. Journal of Comparative Physiology. B, Biochemical, Systemic, and Environmental Physiology. 179: 759-71. PMID 19363616 DOI: 10.1007/S00360-009-0359-Z  0.49
2008 Gao F, Yang H, Xu Q, Wang F, Liu G, German DP. Phenotypic plasticity of gut structure and function during periods of inactivity in Apostichopus japonicus. Comparative Biochemistry and Physiology. Part B, Biochemistry & Molecular Biology. 150: 255-62. PMID 18479956 DOI: 10.1016/J.Cbpb.2008.03.011  0.419
2006 Pryor GS, German DP, Bjorndal KA. Gastrointestinal fermentation in Greater Sirens (Siren lacertina) Journal of Herpetology. 40: 112-117. DOI: 10.1670/163-05A.1  0.479
2006 Horn MH, Gawlicka AK, German DP, Logothetis EA, Cavanagh JW, Boyle KS. Structure and function of the stomachless digestive system in three related species of New World silverside fishes (Atherinopsidae) representing herbivory, omnivory, and carnivory Marine Biology. 149: 1237-1245. DOI: 10.1007/S00227-006-0281-9  0.681
2006 German DP, Horn MH. Gut length and mass in herbivorous and carnivorous prickleback fishes (Teleostei: Stichaeidae): Ontogenetic, dietary, and phylogenetic effects Marine Biology. 148: 1123-1134. DOI: 10.1007/S00227-005-0149-4  0.697
2004 German DP, Horn MH, Gawlicka A. Digestive enzyme activities in herbivorous and carnivorous prickleback fishes (Teleostei: Stichaeidae): ontogenetic, dietary, and phylogenetic effects. Physiological and Biochemical Zoology : Pbz. 77: 789-804. PMID 15547797 DOI: 10.1086/422228  0.715
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