Michael E. Alfaro - Related publications

Affiliations: 
Ecology and Evolutionary Biology University of California, Los Angeles, Los Angeles, CA 
Area:
biomechanics, evolution of ideas
NOTE: We are testing a new system for identifying relevant work based on semantic analysis that identifies similarities between recently published papers and the current author's publications. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches.
50 most relevant papers in past 60 days:
Year Citation  Score
2021 Gippner S, Travers SL, Scherz MD, Colston TJ, Lyra ML, Mohan AV, Multzsch M, Nielsen SV, Rancilhac L, Glaw F, Bauer AM, Vences M. A comprehensive phylogeny of dwarf geckos of the genus Lygodactylus, with insights into their systematics and morphological variation. Molecular Phylogenetics and Evolution. 107311. PMID 34530117 DOI: 10.1016/j.ympev.2021.107311   
2021 He K, Chen X, Qiu YB, Liu Z, Wang WZ, Woodman N, Maldonado JE, Pan X. Mitogenome and phylogenetic analyses support rapid diversification among species groups of small-eared shrews genus (Mammalia: Eulipotyphla: Soricidae). Zoological Research. 42: 739-745. PMID 34636193 DOI: 10.24272/j.issn.2095-8137.2021.199   
2021 Qian H, Jin Y. Are phylogenies resolved at the genus level appropriate for studies on phylogenetic structure of species assemblages? Plant Diversity. 43: 255-263. PMID 34485767 DOI: 10.1016/j.pld.2020.11.005   
2021 Wang Y, Zhang R, Ma Y, Li J, Fan F, Liu X, Yang D. Low-Coverage Whole Genomes Reveal the Higher Phylogeny of Green Lacewings. Insects. 12. PMID 34680626 DOI: 10.3390/insects12100857   
2021 Flores JR, Bippus AC, Suárez GM, Hyvönen J. Defying death: incorporating fossils into the phylogeny of the complex thalloid liverworts (Marchantiidae, Marchantiophyta) confirms high order clades but reveals discrepancies in family-level relationships. Cladistics : the International Journal of the Willi Hennig Society. 37: 231-247. PMID 34478198 DOI: 10.1111/cla.12442   
2021 Atta CJ, Yuan H, Li C, Arcila D, Betancur-R R, Hughes LC, Ortí G, Tornabene L. Exon-capture data and locus screening provide new insights into the phylogeny of flatfishes (Pleuronectoidei). Molecular Phylogenetics and Evolution. 166: 107315. PMID 34537325 DOI: 10.1016/j.ympev.2021.107315   
2021 Vilaça ST, Piccinno R, Rota-Stabelli O, Gabrielli M, Benazzo A, Matschiner M, Soares LS, Bolten AB, Bjorndal KA, Bertorelle G. Divergence and hybridization in sea turtles: Inferences from genome data show evidence of ancient gene flow between species. Molecular Ecology. PMID 34390061 DOI: 10.1111/mec.16113   
2021 Bentlage B, Collins AG. Tackling the phylogenetic conundrum of Hydroidolina (Cnidaria: Medusozoa: Hydrozoa) by assessing competing tree topologies with targeted high-throughput sequencing. Peerj. 9: e12104. PMID 34589302 DOI: 10.7717/peerj.12104   
2021 Sugawara H, Iwata T, Yamashita H, Nagano M. Taxonomic Reassessment of the Izumo Lineage of : Description of a New Species from Chugoku, Japan. Animals : An Open Access Journal From Mdpi. 11. PMID 34438644 DOI: 10.3390/ani11082187   
2021 Gowri Shankar P, Swamy P, Williams RC, Ganesh SR, Moss M, Höglund J, Das I, Sahoo G, Vijayakumar SP, Shanker K, Wüster W, Dutta SK. King or royal family? Testing for species boundaries in the King Cobra, Ophiophagus hannah (Cantor, 1836), using morphology and multilocus DNA analyses. Molecular Phylogenetics and Evolution. 107300. PMID 34474153 DOI: 10.1016/j.ympev.2021.107300   
2021 Rudra B, Gupta RS. Phylogenomic and comparative genomic analyses of species of the family : Proposals for the genera gen. nov. and gen. nov., merger of the genus with the genus , and transfer of some misclassified species of the genus into other genera. International Journal of Systematic and Evolutionary Microbiology. 71. PMID 34546867 DOI: 10.1099/ijsem.0.005011   
2021 Lee H, Wissitrassameewong K, Park MS, Fong JJ, Verbeken A, Kim C, Lim YW. Taxonomic Revision of the Genus (Russulales, Basidiomycota) of South Korea. Mycobiology. 49: 308-345. PMID 34512077 DOI: 10.1080/12298093.2021.1943812   
2021 Vieu JC, Koubínová D, Grant JR. The Evolution of Trait Disparity during the Radiation of the Plant Genus (Gentianaceae) in the Tropical Andes. Biology. 10. PMID 34571702 DOI: 10.3390/biology10090825   
2021 Chazot N, Blandin P, Debat V, Elias M, Condamine FL. Punctuational ecological changes rather than global factors drive species diversification and the evolution of wing phenotypes in Morpho butterflies. Journal of Evolutionary Biology. PMID 34449944 DOI: 10.1111/jeb.13921   
2021 Zhang C, Yang R, Wu L, Luo C, Guo X, Deng Y, Zhou H, Zhang Y. Molecular phylogeny of the Anopheles hyrcanus group (Diptera: Culicidae) based on rDNA-ITS2 and mtDNA-COII. Parasites & Vectors. 14: 454. PMID 34488860 DOI: 10.1186/s13071-021-04971-4   
2021 Song W, Xu D, Chen X, Warren A, Shin MK, Song W, Li L. Overview of the Diversity, Phylogeny and Biogeography of Strombidiid Oligotrich Ciliates (Protista, Ciliophora), With a Brief Revision and a Key to the Known Genera. Frontiers in Microbiology. 12: 700940. PMID 34603227 DOI: 10.3389/fmicb.2021.700940   
2021 Cunha TJ, Reimer JD, Giribet G. Investigating Sources of Conflict in Deep Phylogenomics of Vetigastropod Snails. Systematic Biology. PMID 34469579 DOI: 10.1093/sysbio/syab071   
2021 Zhong S, Zhao L, Huang G, Liu Y, Huang L. The first complete mitochondrial genome of (Mitsukuri & Ohshima in Ohshima, 1912) (Dendrochirotida: Phyllophoridae). Mitochondrial Dna. Part B, Resources. 6: 2979-2980. PMID 34553066 DOI: 10.1080/23802359.2021.1976687   
2021 Rasplus JY, Rodriguez LJ, Sauné L, Peng YQ, Bain A, Kjellberg F, Harrison RD, Pereira RAS, Ubaidillah R, Tollon-Cordet C, Gautier M, Rossi JP, Cruaud A. Exploring systematic biases, rooting methods and morphological evidence to unravel the evolutionary history of the genus Ficus (Moraceae). Cladistics : the International Journal of the Willi Hennig Society. 37: 402-422. PMID 34478193 DOI: 10.1111/cla.12443   
2021 Hauerová R, Hauer T, Kaštovský J, Komárek J, Lepšová-Skácelová O, Mareš J. Tenebriella gen. nov. - the dark twin of Oscillatoria. Molecular Phylogenetics and Evolution. 107293. PMID 34391914 DOI: 10.1016/j.ympev.2021.107293   
2021 Yardeni G, Viruel J, Paris M, Hess J, Groot Crego C, de La Harpe M, Rivera N, Barfuss MHJ, Till W, Guzmán-Jacob V, Krömer T, Lexer C, Paun O, Leroy T. Taxon-specific or universal? Using target capture to study the evolutionary history of rapid radiations. Molecular Ecology Resources. PMID 34606683 DOI: 10.1111/1755-0998.13523   
2021 Bernot JP, Boxshall GA, Crandall KA. A synthesis tree of the Copepoda: integrating phylogenetic and taxonomic data reveals multiple origins of parasitism. Peerj. 9: e12034. PMID 34466296 DOI: 10.7717/peerj.12034   
2021 Britz R, Conway KW, Rüber L. The emerging vertebrate model species for neurophysiological studies is Danionella cerebrum, new species (Teleostei: Cyprinidae). Scientific Reports. 11: 18942. PMID 34556691 DOI: 10.1038/s41598-021-97600-0   
2021 Knyshov A, Weirauch C, Hoey-Chamberlain R. Phylogenetic relationships and revised classification of the true bug infraorder Dipsocoromorpha (Insecta: Hemiptera: Heteroptera). Cladistics : the International Journal of the Willi Hennig Society. 37: 248-275. PMID 34478197 DOI: 10.1111/cla.12435   
2021 Gearty W, Carrillo E, Payne JL. Ecological Filtering and Exaptation in the Evolution of Marine Snakes. The American Naturalist. 198: 506-521. PMID 34559607 DOI: 10.1086/716015   
2021 Sabbag AF, Tereza C Thomé M, Lyra ML, Brasileiro CA, Moriarty Lemmon E, Lemmon A, F B Haddad C. Sympatric and independently evolving lineages in the Thoropa miliaris - T. taophora species complex (Anura: Cycloramphidae). Molecular Phylogenetics and Evolution. 107220. PMID 34481948 DOI: 10.1016/j.ympev.2021.107220   
2021 Drury JP, Clavel J, Tobias JA, Rolland J, Sheard C, Morlon H. Tempo and mode of morphological evolution are decoupled from latitude in birds. Plos Biology. 19: e3001270. PMID 34428214 DOI: 10.1371/journal.pbio.3001270   
2021 Canales-Aguirre CB, Ritchie PA, Hernández S, Herrera-Yañez V, Ferrada Fuentes S, Oyarzún FX, Hernández CE, Galleguillos R, Arratia G. Phylogenetic relationships, origin and historical biogeography of the genus (Clupeiformes: Clupeidae). Peerj. 9: e11737. PMID 34466280 DOI: 10.7717/peerj.11737   
2021 Yang B, Zhang Z, Yang C, Wang Y, Orr MC, Hongbin W, Zhang AB. Identification of Species by Combining Molecular and Morphological Data Using Convolutional Neural Networks. Systematic Biology. PMID 34524452 DOI: 10.1093/sysbio/syab076   
2021 Tian X, Guo J, Zhou X, Ma K, Ma Y, Shi T, Shi Y. Comparative and Evolutionary Analyses on the Complete Plastomes of Five Horticultural Plants. Frontiers in Plant Science. 12: 705874. PMID 34512691 DOI: 10.3389/fpls.2021.705874   
2021 Crous PW, Lombard L, Sandoval-Denis M, Seifert KA, Schroers HJ, Chaverri P, Gené J, Guarro J, Hirooka Y, Bensch K, Kema GHJ, Lamprecht SC, Cai L, Rossman AY, Stadler M, et al. : more than a node or a foot-shaped basal cell. Studies in Mycology. 98: 100116. PMID 34466168 DOI: 10.1016/j.simyco.2021.100116   
2021 Tihelka E, Cai C, Giacomelli M, Lozano-Fernandez J, Rota-Stabelli O, Huang D, Engel MS, Donoghue PCJ, Pisani D. The evolution of insect biodiversity. Current Biology : Cb. 31: R1299-R1311. PMID 34637741 DOI: 10.1016/j.cub.2021.08.057   
2021 Zhang H, Zhong Y, Zhu Y, Agnarsson I, Liu J. A molecular phylogeny of the Chinese spiders (Sparassidae, Heteropodinae): implications for taxonomy. Peerj. 9: e11775. PMID 34484980 DOI: 10.7717/peerj.11775   
2021 Boluda CG, Christe C, Randriarisoa A, Gautier L, Naciri Y. Species Delimitation and Conservation in Taxonomically Challenging Lineages: The Case of Two Clades of (Sapotaceae) in Madagascar. Plants (Basel, Switzerland). 10. PMID 34451747 DOI: 10.3390/plants10081702   
2021 Jaynes KE, Myers EA, Gvoždík V, Blackburn DC, Portik DM, Greenbaum E, Jongsma GFM, Rödel MO, Badjedjea G, Bamba-Kaya A, Baptista NL, Akuboy JB, Ernst R, Kouete MT, Kusamba C, et al. Giant Tree Frog diversification in West and Central Africa: isolation by physical barriers, climate, and reproductive traits. Molecular Ecology. PMID 34516675 DOI: 10.1111/mec.16169   
2021 Cheng S, Zeng W, Wang J, Liu L, Liang H, Kou Y, Wang H, Fan D, Zhang Z. Species Delimitation of Asteropyrum (Ranunculaceae) Based on Morphological, Molecular, and Ecological Variation. Frontiers in Plant Science. 12: 681864. PMID 34567021 DOI: 10.3389/fpls.2021.681864   
2021 Rajchenberg M, Pildain MB, de Errasti A, Riquelme C, Becerra J, Torres-Díaz C, Cabrera-Pardo JR. Species and genera in Aleurodiscus sensu lato as viewed from the Southern Hemisphere. Mycologia. 1-14. PMID 34424828 DOI: 10.1080/00275514.2021.1940671   
2021 Buffalo V. Quantifying the relationship between genetic diversity and population size suggests natural selection cannot explain Lewontin's paradox. Elife. 10. PMID 34409937 DOI: 10.7554/eLife.67509   
2021 Shi S, Puzakov M, Guan Z, Xiang K, Diaby M, Wang Y, Wang S, Song C, Gao B. Prokaryotic and Eukaryotic Horizontal Transfer of (DD82E), a New Superfamily of DNA Transposons. Biology. 10. PMID 34681104 DOI: 10.3390/biology10101005   
2021 Guan JY, Shen SQ, Zhang ZY, Xu XD, Storey KB, Yu DN, Zhang JY. Comparative Mitogenomes of Two Species (Microcoryphia: Machilidae) along with Phylogenetic Analyses of Microcoryphia. Insects. 12. PMID 34564235 DOI: 10.3390/insects12090795   
2021 Kiran M, Caboň M, Senko D, Khalid AN, Adamčík S. Description of the Fifth New Species of subsect. from Pakistan Indicates Local Diversity Hotspot of Ectomycorrhizal Fungi in Southwestern Himalayas. Life (Basel, Switzerland). 11. PMID 34357034 DOI: 10.3390/life11070662   
2021 Ma Y, Wang M, Wei F, Nie Y. Geographic distributions shape the functional traits in a large mammalian family. Ecology and Evolution. 11: 13175-13185. PMID 34646461 DOI: 10.1002/ece3.8039   
2021 Cohen J. Phylogenomics, floral evolution, and biogeography of Lithospermum L. (Boraginaceae). Molecular Phylogenetics and Evolution. 107317. PMID 34547439 DOI: 10.1016/j.ympev.2021.107317   
2021 Pal S, Mirza ZA, Dsouza P, Shanker K. Diversifying on the Ark: multiple new endemic lineages of dwarf geckos from the Western Ghats provide insights into the systematics and biogeography of South Asian (Reptilia: Squamata). Zoological Research. 42: 675-691. PMID 34581029 DOI: 10.24272/j.issn.2095-8137.2021.074   
2021 Tao Y, Chen B, Kang M, Liu Y, Wang J. Genome-Wide Evidence for Complex Hybridization and Demographic History in a Group of From China. Frontiers in Genetics. 12: 717200. PMID 34527022 DOI: 10.3389/fgene.2021.717200   
2021 Trageser S, Al-Razi H, Maria M, Nobel F, Asaduzzaman M, Rahman SC. A new species of Peters, 1867; Dicroglossidae) from southeastern Bangladesh, with comments on the genera and . Peerj. 9: e11998. PMID 34466290 DOI: 10.7717/peerj.11998   
2021 Hu Z, Xu N, Gu H, Chai Z, Takahashi K, Li Z, Deng Y, Iwataki M, Matsuoka K, Tang YZ. Morpho-molecular description of a new HAB species, Pseudocochlodinium profundisulcus gen. et sp. nov., and its LSU rRNA gene based genetic diversity and geographical distribution. Harmful Algae. 108: 102098. PMID 34588125 DOI: 10.1016/j.hal.2021.102098   
2021 Chen W, Liang J, Ren X, Zhao J, Han Y, Liang Z. Cryptic Diversity of -like Species in Guizhou, China. Life (Basel, Switzerland). 11. PMID 34685462 DOI: 10.3390/life11101093   
2021 Wang C, Jiang L, Qu Z, Al-Farraj SA, Warren A, Hu X. Taxonomy and Phylogeny of Three Species of Dysteria (Ciliophora, Phyllopharyngea) Including the Description of Dysteria ozakii nom. nov. Protist. 172: 125831. PMID 34592569 DOI: 10.1016/j.protis.2021.125831   
2021 Mandagi IF, Kakioka R, Montenegro J, Kobayashi H, Masengi KWA, Inomata N, Nagano AJ, Toyoda A, Ansai S, Matsunami M, Kimura R, Kitano J, Kusumi J, Yamahira K. Species divergence and repeated ancient hybridization in a Sulawesian lake system. Journal of Evolutionary Biology. PMID 34532915 DOI: 10.1111/jeb.13932