| Year |
Citation |
Score |
| 2024 |
Callahan AJ, Gandhesiri S, Travaline TL, Reja RM, Lozano Salazar L, Hanna S, Lee YC, Li K, Tokareva OS, Swiecicki JM, Loas A, Verdine GL, McGee JH, Pentelute BL. Mirror-image ligand discovery enabled by single-shot fast-flow synthesis of D-proteins. Nature Communications. 15: 1813. PMID 38418820 DOI: 10.1038/s41467-024-45634-z |
0.658 |
|
| 2023 |
Tokareva OS, Li K, Travaline TL, Thomson TM, Swiecicki JM, Moussa M, Ramirez JD, Litchman S, Verdine GL, McGee JH. Recognition and reprogramming of E3 ubiquitin ligase surfaces by α-helical peptides. Nature Communications. 14: 6992. PMID 37914719 DOI: 10.1038/s41467-023-42395-z |
0.692 |
|
| 2022 |
Li K, Tokareva OS, Thomson TM, Wahl SCT, Travaline TL, Ramirez JD, Choudary SK, Agarwal S, Walkup WG, Olsen TJ, Brennan MJ, Verdine GL, McGee JH. De novo mapping of α-helix recognition sites on protein surfaces using unbiased libraries. Proceedings of the National Academy of Sciences of the United States of America. 119: e2210435119. PMID 36534810 DOI: 10.1073/pnas.2210435119 |
0.687 |
|
| 2020 |
Shigdel UK, Ovchinnikov V, Lee SJ, Shih JA, Karplus M, Nam K, Verdine GL. The trajectory of intrahelical lesion recognition and extrusion by the human 8-oxoguanine DNA glycosylase. Nature Communications. 11: 4437. PMID 32895378 DOI: 10.1038/S41467-020-18290-2 |
0.848 |
|
| 2020 |
Shigdel UK, Lee SJ, Sowa ME, Bowman BR, Robison K, Zhou M, Pua KH, Stiles DT, Blodgett JAV, Udwary DW, Rajczewski AT, Mann AS, Mostafavi S, Hardy T, Arya S, ... ... Verdine GL, et al. Genomic discovery of an evolutionarily programmed modality for small-molecule targeting of an intractable protein surface. Proceedings of the National Academy of Sciences of the United States of America. PMID 32606248 DOI: 10.1073/Pnas.2006560117 |
0.787 |
|
| 2020 |
Chatterjee N, D'Souza S, Shabab M, Harris CA, Hilinski GJ, Verdine GL, Walker GC. A Stapled POL κ Peptide Targets REV1 to Inhibit Mutagenic Translesion Synthesis. Environmental and Molecular Mutagenesis. PMID 32573829 DOI: 10.1002/Em.22395 |
0.445 |
|
| 2020 |
Stewart ML, Perl NR, Lee S, Xue L, Zhou M, Simon J, Luly KM, Grigoriu S, Yuzhakov A, Silver A, Lowe JT, Benod CC, Mann AS, Verdine GL, Rigby AC, et al. Abstract B37: Development of inhibitors of the activated form of KRAS G12C Molecular Cancer Research. 18. DOI: 10.1158/1557-3125.Ras18-B37 |
0.323 |
|
| 2019 |
Lee SJ, Sung RJ, Verdine GL. Mechanism of DNA Lesion Homing and Recognition by the Uvr Nucleotide Excision Repair System. Research (Washington, D.C.). 2019: 5641746. PMID 31549070 DOI: 10.34133/2019/5641746 |
0.651 |
|
| 2017 |
Mitra S, Montgomery JE, Kolar MJ, Li G, Jeong KJ, Peng B, Verdine GL, Mills GB, Moellering RE. Stapled peptide inhibitors of RAB25 target context-specific phenotypes in cancer. Nature Communications. 8: 660. PMID 28939823 DOI: 10.1038/S41467-017-00888-8 |
0.694 |
|
| 2017 |
Levinson AM, McGee JH, Roberts AG, Creech G, Wang T, Peterson MT, Hendrickson RC, Verdine GL, Danishefsky SJ. Total Chemical Synthesis and Folding of All-L and All-D Variants of Oncogenic KRas(G12V). Journal of the American Chemical Society. PMID 28448128 DOI: 10.1021/Jacs.7B02988 |
0.323 |
|
| 2017 |
Wang L, Chakravarthy S, Verdine GL. Structural Basis for the Lesion-scanning Mechanism of the Bacterial MutY DNA Glycosylase. The Journal of Biological Chemistry. PMID 28130451 DOI: 10.1074/Jbc.M116.757039 |
0.516 |
|
| 2017 |
Pua KH, Stiles DT, Sowa ME, Verdine GL. IMPDH2 Is an Intracellular Target of the Cyclophilin A and Sanglifehrin A Complex. Cell Reports. 18: 432-442. PMID 28076787 DOI: 10.1016/J.Celrep.2016.12.030 |
0.316 |
|
| 2015 |
Hilinski GJ, Kim YW, Hong J, Kutchukian PS, Crenshaw CM, Berkovitch SS, Chang A, Ham S, Verdine GL. Correction to "Stitched α-Helical Peptides via Bis Ring-Closing Metathesis". Journal of the American Chemical Society. PMID 26134449 DOI: 10.1021/Jacs.5B04245 |
0.758 |
|
| 2015 |
Wang L, Lee SJ, Verdine GL. Structural Basis for Avoidance of Promutagenic DNA Repair by MutY Adenine DNA Glycosylase. The Journal of Biological Chemistry. 290: 17096-105. PMID 25995449 DOI: 10.1074/Jbc.M115.657866 |
0.471 |
|
| 2015 |
Chu Q, Moellering RE, Hilinski GJ, Kim YW, Grossmann TN, Yeh JTH, Verdine GL. Towards understanding cell penetration by stapled peptides Medchemcomm. 6: 111-119. DOI: 10.1039/C4Md00131A |
0.678 |
|
| 2014 |
Hilinski GJ, Kim YW, Hong J, Kutchukian PS, Crenshaw CM, Berkovitch SS, Chang A, Ham S, Verdine GL. Stitched α-helical peptides via bis ring-closing metathesis. Journal of the American Chemical Society. 136: 12314-22. PMID 25105213 DOI: 10.1021/Ja505141J |
0.78 |
|
| 2013 |
Shim SY, Kim YW, Verdine GL. A new i, i + 3 peptide stapling system for α-helix stabilization. Chemical Biology & Drug Design. 82: 635-42. PMID 24267668 DOI: 10.1111/Cbdd.12231 |
0.47 |
|
| 2013 |
Sung RJ, Zhang M, Qi Y, Verdine GL. Structural and biochemical analysis of DNA helix invasion by the bacterial 8-oxoguanine DNA glycosylase MutM. The Journal of Biological Chemistry. 288: 10012-23. PMID 23404556 DOI: 10.1074/Jbc.M112.415612 |
0.759 |
|
| 2013 |
Palchaudhuri R, Ang K, Saez B, Sykes DB, Verdine GL, Scadden DT. Differentiation Induction In Acute Myeloid Leukemia Using Site-Specific DNA-Targeting Blood. 122: 3940-3940. DOI: 10.1182/Blood.V122.21.3940.3940 |
0.479 |
|
| 2012 |
Grossmann TN, Yeh JT, Bowman BR, Chu Q, Moellering RE, Verdine GL. Inhibition of oncogenic Wnt signaling through direct targeting of β-catenin. Proceedings of the National Academy of Sciences of the United States of America. 109: 17942-7. PMID 23071338 DOI: 10.1073/Pnas.1208396109 |
0.679 |
|
| 2012 |
Didovyk A, Verdine GL. Structural origins of DNA target selection and nucleobase extrusion by a DNA cytosine methyltransferase. The Journal of Biological Chemistry. 287: 40099-105. PMID 23012373 DOI: 10.1074/Jbc.M112.413054 |
0.849 |
|
| 2012 |
Crenshaw CM, Nam K, Oo K, Kutchukian PS, Bowman BR, Karplus M, Verdine GL. Enforced presentation of an extrahelical guanine to the lesion recognition pocket of human 8-oxoguanine glycosylase, hOGG1. The Journal of Biological Chemistry. 287: 24916-28. PMID 22511791 DOI: 10.1074/Jbc.M111.316497 |
0.856 |
|
| 2012 |
Sung RJ, Zhang M, Qi Y, Verdine GL. Sequence-dependent structural variation in DNA undergoing intrahelical inspection by the DNA glycosylase MutM. The Journal of Biological Chemistry. 287: 18044-54. PMID 22465958 DOI: 10.1074/Jbc.M111.313635 |
0.766 |
|
| 2012 |
Gude L, Berkovitch SS, Santos WL, Kutchukian PS, Pawloski AR, Kuimelis R, McGall G, Verdine GL. Mapping targetable sites on human telomerase RNA pseudoknot/template domain using 2'-OMe RNA-interacting polynucleotide (RIPtide) microarrays. The Journal of Biological Chemistry. 287: 18843-53. PMID 22451672 DOI: 10.1074/Jbc.M111.316596 |
0.58 |
|
| 2012 |
Verdine GL, Hilinski GJ. Stapled peptides for intracellular drug targets. Methods in Enzymology. 503: 3-33. PMID 22230563 DOI: 10.1016/B978-0-12-396962-0.00001-X |
0.323 |
|
| 2012 |
Qi Y, Nam K, Spong MC, Banerjee A, Sung RJ, Zhang M, Karplus M, Verdine GL. Strandwise translocation of a DNA glycosylase on undamaged DNA. Proceedings of the National Academy of Sciences of the United States of America. 109: 1086-91. PMID 22219368 DOI: 10.1073/Pnas.1111237108 |
0.842 |
|
| 2012 |
Baek S, Kutchukian PS, Verdine GL, Huber R, Holak TA, Lee KW, Popowicz GM. Structure of the stapled p53 peptide bound to Mdm2. Journal of the American Chemical Society. 134: 103-6. PMID 22148351 DOI: 10.1021/Ja2090367 |
0.345 |
|
| 2012 |
Verdine GL, Hilinski GJ. All-hydrocarbon stapled peptides as synthetic cell-accessible mini-proteins Drug Discovery Today: Technologies. 9: e41-e47. DOI: 10.1016/J.Ddtec.2012.01.004 |
0.305 |
|
| 2011 |
Kim YW, Grossmann TN, Verdine GL. Synthesis of all-hydrocarbon stapled α-helical peptides by ring-closing olefin metathesis. Nature Protocols. 6: 761-71. PMID 21637196 DOI: 10.1038/Nprot.2011.324 |
0.484 |
|
| 2010 |
Bowman BR, Lee S, Wang S, Verdine GL. Structure of Escherichia coli AlkA in complex with undamaged DNA. The Journal of Biological Chemistry. 285: 35783-91. PMID 20843803 DOI: 10.1074/Jbc.M110.155663 |
0.576 |
|
| 2010 |
Kim YW, Kutchukian PS, Verdine GL. Introduction of all-hydrocarbon i,i+3 staples into alpha-helices via ring-closing olefin metathesis. Organic Letters. 12: 3046-9. PMID 20527740 DOI: 10.1021/Ol1010449 |
0.449 |
|
| 2010 |
Qi Y, Spong MC, Nam K, Karplus M, Verdine GL. Entrapment and structure of an extrahelical guanine attempting to enter the active site of a bacterial DNA glycosylase, MutM. The Journal of Biological Chemistry. 285: 1468-78. PMID 19889642 DOI: 10.1074/Jbc.M109.069799 |
0.849 |
|
| 2010 |
Verdine GL. Abstract IA1-2: Drugging oncogenic transcription factors Clinical Cancer Research. 16. DOI: 10.1158/1078-0432.Tcmusa10-Ia1-2 |
0.311 |
|
| 2010 |
Moellering RE, Cornejo M, Davis TN, Bianco CD, Aster JC, Blacklow SC, Kung AL, Gilliland DG, Verdine GL, Bradner JE. Erratum: Direct inhibition of the NOTCH transcription factor complex Nature. 463: 384-384. DOI: 10.1038/Nature08660 |
0.656 |
|
| 2010 |
Moellering R, Shen Y, Wiest O, Bradner J, Verdine G. 69 Computational modeling and molecular optimization of stabilized alpha-helical peptides targeting NOTCH-CSL transcriptional complexes European Journal of Cancer Supplements. 8: 30. DOI: 10.1016/S1359-6349(10)71774-2 |
0.671 |
|
| 2009 |
Qi Y, Spong MC, Nam K, Banerjee A, Jiralerspong S, Karplus M, Verdine GL. Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme. Nature. 462: 762-6. PMID 20010681 DOI: 10.1038/Nature08561 |
0.841 |
|
| 2009 |
Nam K, Verdine GL, Karplus M. Analysis of an anomalous mutant of MutM DNA glycosylase leads to new insights into the catalytic mechanism. Journal of the American Chemical Society. 131: 18208-9. PMID 19961158 DOI: 10.1021/Ja907544B |
0.443 |
|
| 2009 |
Moellering RE, Cornejo M, Davis TN, Del Bianco C, Aster JC, Blacklow SC, Kung AL, Gilliland DG, Verdine GL, Bradner JE. Direct inhibition of the NOTCH transcription factor complex. Nature. 462: 182-8. PMID 19907488 DOI: 10.1038/Nature08543 |
0.704 |
|
| 2009 |
Blainey PC, Luo G, Kou SC, Mangel WF, Verdine GL, Bagchi B, Xie XS. Nonspecifically bound proteins spin while diffusing along DNA. Nature Structural & Molecular Biology. 16: 1224-9. PMID 19898474 DOI: 10.1038/Nsmb.1716 |
0.475 |
|
| 2009 |
Lee S, Verdine GL. Atomic substitution reveals the structural basis for substrate adenine recognition and removal by adenine DNA glycosylase. Proceedings of the National Academy of Sciences of the United States of America. 106: 18497-502. PMID 19841264 DOI: 10.1073/Pnas.0902908106 |
0.556 |
|
| 2009 |
Kutchukian PS, Yang JS, Verdine GL, Shakhnovich EI. All-atom model for stabilization of alpha-helical structure in peptides by hydrocarbon staples. Journal of the American Chemical Society. 131: 4622-7. PMID 19334772 DOI: 10.1021/Ja805037P |
0.304 |
|
| 2009 |
Kim YW, Verdine GL. Stereochemical effects of all-hydrocarbon tethers in i,i+4 stapled peptides. Bioorganic & Medicinal Chemistry Letters. 19: 2533-6. PMID 19332370 DOI: 10.1016/J.Bmcl.2009.03.022 |
0.464 |
|
| 2009 |
Pakotiprapha D, Liu Y, Verdine GL, Jeruzalmi D. A structural model for the damage-sensing complex in bacterial nucleotide excision repair. The Journal of Biological Chemistry. 284: 12837-44. PMID 19287003 DOI: 10.1074/Jbc.M900571200 |
0.805 |
|
| 2009 |
Nam K, Verdine GL, Karplus M. Molecular Mechanism of the Acceleration of the Damaged Base Extrusion and its Recognition by Bacterial MutM DNA Glycosylase: Free Energy Simulation Studies Biophysical Journal. 96: 342a. DOI: 10.1016/J.Bpj.2008.12.1716 |
0.513 |
|
| 2008 |
Lee S, Bowman BR, Ueno Y, Wang S, Verdine GL. Synthesis and structure of duplex DNA containing the genotoxic nucleobase lesion N7-methylguanine. Journal of the American Chemical Society. 130: 11570-1. PMID 18686953 DOI: 10.1021/Ja8025328 |
0.542 |
|
| 2008 |
Komazin-Meredith G, Petrella RJ, Santos WL, Filman DJ, Hogle JM, Verdine GL, Karplus M, Coen DM. The human cytomegalovirus UL44 C clamp wraps around DNA. Structure (London, England : 1993). 16: 1214-25. PMID 18682223 DOI: 10.1016/J.Str.2008.05.008 |
0.732 |
|
| 2008 |
Bowman BR, Lee S, Wang S, Verdine GL. Structure of the E. coli DNA glycosylase AlkA bound to the ends of duplex DNA: a system for the structure determination of lesion-containing DNA. Structure (London, England : 1993). 16: 1166-74. PMID 18682218 DOI: 10.1016/J.Str.2008.04.012 |
0.547 |
|
| 2008 |
Lee S, Radom CT, Verdine GL. Trapping and structural elucidation of a very advanced intermediate in the lesion-extrusion pathway of hOGG1. Journal of the American Chemical Society. 130: 7784-5. PMID 18507380 DOI: 10.1021/Ja800821T |
0.825 |
|
| 2008 |
Komazin-Meredith G, Santos WL, Filman DJ, Hogle JM, Verdine GL, Coen DM. The positively charged surface of herpes simplex virus UL42 mediates DNA binding. The Journal of Biological Chemistry. 283: 6154-61. PMID 18178550 DOI: 10.1074/Jbc.M708691200 |
0.712 |
|
| 2008 |
Pakotiprapha D, Inuzuka Y, Bowman BR, Moolenaar GF, Goosen N, Jeruzalmi D, Verdine GL. Crystal structure of Bacillus stearothermophilus UvrA provides insight into ATP-modulated dimerization, UvrB interaction, and DNA binding. Molecular Cell. 29: 122-33. PMID 18158267 DOI: 10.1016/J.Molcel.2007.10.026 |
0.833 |
|
| 2008 |
Zhao Z, McKee CJ, Kessl JJ, Santos WL, Daigle JE, Engelman A, Verdine G, Kvaratskhelia M. Subunit-specific protein footprinting reveals significant structural rearrangements and a role for N-terminal Lys-14 of HIV-1 Integrase during viral DNA binding. The Journal of Biological Chemistry. 283: 5632-41. PMID 18093980 DOI: 10.1074/Jbc.M705241200 |
0.718 |
|
| 2008 |
Bernal F, Wade M, Silverstein AM, Verdine GL, Wahl GM, Walensky LD. A Stapled p53 Helix Targets HDMX to Overcome Nutlin-3 Resistance and Reactivate the p53 Tumor Suppressor Pathway in Cancer Blood. 112: 2645-2645. DOI: 10.1182/Blood.V112.11.2645.2645 |
0.61 |
|
| 2007 |
Verdine GL, Walensky LD. The challenge of drugging undruggable targets in cancer: lessons learned from targeting BCL-2 family members. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 13: 7264-70. PMID 18094406 DOI: 10.1158/1078-0432.Ccr-07-2184 |
0.306 |
|
| 2007 |
Bernal F, Tyler AF, Korsmeyer SJ, Walensky LD, Verdine GL. Reactivation of the p53 tumor suppressor pathway by a stapled p53 peptide. Journal of the American Chemical Society. 129: 2456-7. PMID 17284038 DOI: 10.1021/Ja0693587 |
0.585 |
|
| 2007 |
Radom CT, Banerjee A, Verdine GL. Structural characterization of human 8-oxoguanine DNA glycosylase variants bearing active site mutations. The Journal of Biological Chemistry. 282: 9182-94. PMID 17114185 DOI: 10.1074/Jbc.M608989200 |
0.826 |
|
| 2007 |
Moellering R, Cornejo M, Rocknik J, Hancock M, DelBianco C, Blacklow S, Gilliland G, Verdine G, Bradner J. Direct Inhibition of the Notch Transactivation Complex with Synthetic Constrained Peptides in T-Cell Acute Lymphoblastic Leukemia. Blood. 110: 2819-2819. DOI: 10.1182/Blood.V110.11.2819.2819 |
0.721 |
|
| 2007 |
Bernal F, Tyler AF, Korsmeyer SJ, Walensky aLD, Verdine GL. Reactivation of the p53 Tumor Suppressor Pathway by a Stapled p53 Peptide [J. Am. Chem. Soc. 2007, 129, 2456−2457]. Journal of the American Chemical Society. 129: 5298-5298. DOI: 10.1021/Ja076886P |
0.565 |
|
| 2006 |
Banerjee A, Verdine GL. A nucleobase lesion remodels the interaction of its normal neighbor in a DNA glycosylase complex. Proceedings of the National Academy of Sciences of the United States of America. 103: 15020-5. PMID 17015827 DOI: 10.1073/Pnas.0603644103 |
0.641 |
|
| 2006 |
Dou Y, Milne TA, Ruthenburg AJ, Lee S, Lee JW, Verdine GL, Allis CD, Roeder RG. Regulation of MLL1 H3K4 methyltransferase activity by its core components. Nature Structural & Molecular Biology. 13: 713-9. PMID 16878130 DOI: 10.1038/Nsmb1128 |
0.743 |
|
| 2006 |
Ruthenburg AJ, Wang W, Graybosch DM, Li H, Allis CD, Patel DJ, Verdine GL. Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex. Nature Structural & Molecular Biology. 13: 704-12. PMID 16829959 DOI: 10.1038/Nsmb1119 |
0.729 |
|
| 2006 |
Blainey PC, van Oijen AM, Banerjee A, Verdine GL, Xie XS. A base-excision DNA-repair protein finds intrahelical lesion bases by fast sliding in contact with DNA. Proceedings of the National Academy of Sciences of the United States of America. 103: 5752-7. PMID 16585517 DOI: 10.1073/Pnas.0509723103 |
0.636 |
|
| 2006 |
Banerjee A, Santos WL, Verdine GL. Structure of a DNA glycosylase searching for lesions. Science (New York, N.Y.). 311: 1153-7. PMID 16497933 DOI: 10.1126/Science.1120288 |
0.779 |
|
| 2006 |
Losey HC, Ruthenburg AJ, Verdine GL. Crystal structure of Staphylococcus aureus tRNA adenosine deaminase TadA in complex with RNA. Nature Structural & Molecular Biology. 13: 153-9. PMID 16415880 DOI: 10.1038/Nsmb1047 |
0.785 |
|
| 2006 |
Johnson AA, Santos W, Pais GC, Marchand C, Amin R, Burke TR, Verdine G, Pommier Y. Integration requires a specific interaction of the donor DNA terminal 5'-cytosine with glutamine 148 of the HIV-1 integrase flexible loop. The Journal of Biological Chemistry. 281: 461-7. PMID 16257967 DOI: 10.1074/Jbc.M511348200 |
0.676 |
|
| 2006 |
Walensky LD, Pitter K, Morash JG, Verdine GL, Korsmeyer SJ. Anti-Leukemic Potency of Stapled BH3 Helices Correlates with Their Capacity for Bifunctional Activation of Apoptotic Pathways. Blood. 108: 711-711. DOI: 10.1182/Blood.V108.11.711.711 |
0.308 |
|
| 2006 |
Bernal F, Walensky LD, Tyler AF, Korsmeyer SJ, Verdine GL. Selective Targeting of the p53-hDM2 Interaction Using Hydrocarbon-Stapled p53 Peptides. Blood. 108: 525-525. DOI: 10.1182/Blood.V108.11.525.525 |
0.614 |
|
| 2005 |
He C, Hus JC, Sun LJ, Zhou P, Norman DP, Dötsch V, Wei H, Gross JD, Lane WS, Wagner G, Verdine GL. A methylation-dependent electrostatic switch controls DNA repair and transcriptional activation by E. coli ada. Molecular Cell. 20: 117-29. PMID 16209950 DOI: 10.1016/J.Molcel.2005.08.013 |
0.833 |
|
| 2005 |
Plummer KA, Carothers JM, Yoshimura M, Szostak JW, Verdine GL. In vitro selection of RNA aptamers against a composite small molecule-protein surface. Nucleic Acids Research. 33: 5602-10. PMID 16199752 DOI: 10.1093/Nar/Gki867 |
0.764 |
|
| 2005 |
Wei H, Ruthenburg AJ, Bechis SK, Verdine GL. Nucleotide-dependent domain movement in the ATPase domain of a human type IIA DNA topoisomerase. The Journal of Biological Chemistry. 280: 37041-7. PMID 16100112 DOI: 10.1074/Jbc.M506520200 |
0.797 |
|
| 2005 |
Ruthenburg AJ, Graybosch DM, Huetsch JC, Verdine GL. A superhelical spiral in the Escherichia coli DNA gyrase A C-terminal domain imparts unidirectional supercoiling bias. The Journal of Biological Chemistry. 280: 26177-84. PMID 15897198 DOI: 10.1074/Jbc.M502838200 |
0.779 |
|
| 2005 |
Banerjee A, Yang W, Karplus M, Verdine GL. Structure of a repair enzyme interrogating undamaged DNA elucidates recognition of damaged DNA. Nature. 434: 612-8. PMID 15800616 DOI: 10.1038/Nature03458 |
0.668 |
|
| 2005 |
Chung SJ, Fromme JC, Verdine GL. Structure of human cytidine deaminase bound to a potent inhibitor. Journal of Medicinal Chemistry. 48: 658-60. PMID 15689149 DOI: 10.1021/Jm0496279 |
0.716 |
|
| 2005 |
He C, Hus J, Sun LJ, Zhou P, Norman D, Doetsch V, Gross J, Lane W, Wagner G, Verdine G. E. Coli Ada in a complex with DNA Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.13018/Bmr6605 |
0.817 |
|
| 2004 |
Chung SJ, Verdine GL. Structures of end products resulting from lesion processing by a DNA glycosylase/lyase. Chemistry & Biology. 11: 1643-9. PMID 15610848 DOI: 10.1016/J.Chembiol.2004.09.014 |
0.556 |
|
| 2004 |
Fromme JC, Verdine GL. Base excision repair. Advances in Protein Chemistry. 69: 1-41. PMID 15588838 DOI: 10.1016/S0065-3233(04)69001-2 |
0.793 |
|
| 2004 |
Walensky LD, Kung AL, Escher I, Malia TJ, Barbuto S, Wright RD, Wagner G, Verdine GL, Korsmeyer SJ. Activation of apoptosis in vivo by a hydrocarbon-stapled BH3 helix. Science (New York, N.Y.). 305: 1466-70. PMID 15353804 DOI: 10.1126/Science.1099191 |
0.32 |
|
| 2004 |
Fromme JC, Banerjee A, Verdine GL. DNA glycosylase recognition and catalysis. Current Opinion in Structural Biology. 14: 43-9. PMID 15102448 DOI: 10.1016/J.Sbi.2004.01.003 |
0.828 |
|
| 2004 |
Fromme JC, Banerjee A, Huang SJ, Verdine GL. Structural basis for removal of adenine mispaired with 8-oxoguanine by MutY adenine DNA glycosylase. Nature. 427: 652-6. PMID 14961129 DOI: 10.1038/Nature02306 |
0.822 |
|
| 2003 |
Verdine GL, Norman DP. Covalent trapping of protein-DNA complexes. Annual Review of Biochemistry. 72: 337-66. PMID 14527324 DOI: 10.1146/Annurev.Biochem.72.121801.161447 |
0.807 |
|
| 2003 |
Fromme JC, Verdine GL. DNA lesion recognition by the bacterial repair enzyme MutM. The Journal of Biological Chemistry. 278: 51543-8. PMID 14525999 DOI: 10.1074/Jbc.M307768200 |
0.801 |
|
| 2003 |
Fromme JC, Verdine GL. Structure of a trapped endonuclease III-DNA covalent intermediate. The Embo Journal. 22: 3461-71. PMID 12840008 DOI: 10.1093/Emboj/Cdg311 |
0.8 |
|
| 2003 |
Wibley JE, Waters TR, Haushalter K, Verdine GL, Pearl LH. Structure and specificity of the vertebrate anti-mutator uracil-DNA glycosylase SMUG1. Molecular Cell. 11: 1647-59. PMID 12820976 DOI: 10.1016/S1097-2765(03)00235-1 |
0.842 |
|
| 2003 |
Shi Z, Harrison BA, Verdine GL. Unpredictable stereochemical preferences for mu opioid receptor activity in an exhaustively stereodiversified library of 1,4-enediols. Organic Letters. 5: 633-6. PMID 12605477 DOI: 10.1021/Ol027237F |
0.672 |
|
| 2003 |
Gierasch TM, Shi Z, Verdine GL. Extensively stereodiversified scaffolds for use in diversity-oriented library synthesis. Organic Letters. 5: 621-4. PMID 12605474 DOI: 10.1021/Ol027116F |
0.564 |
|
| 2003 |
Harrison BA, Pasternak GW, Verdine GL. 2,6-Dimethyltyrosine analogues of a stereodiversified ligand library: highly potent, selective, non-peptidic mu opioid receptor agonists. Journal of Medicinal Chemistry. 46: 677-80. PMID 12593647 DOI: 10.1021/Jm025608S |
0.54 |
|
| 2003 |
Fromme JC, Bruner SD, Yang W, Karplus M, Verdine GL. Product-assisted catalysis in base-excision DNA repair. Nature Structural Biology. 10: 204-11. PMID 12592398 DOI: 10.1038/Nsb902 |
0.849 |
|
| 2003 |
Norman DP, Chung SJ, Verdine GL. Structural and biochemical exploration of a critical amino acid in human 8-oxoguanine glycosylase. Biochemistry. 42: 1564-72. PMID 12578369 DOI: 10.1021/Bi026823D |
0.805 |
|
| 2003 |
He C, Wei H, Verdine GL. Converting the sacrificial DNA repair protein N-ada into a catalytic methyl phosphotriester repair enzyme. Journal of the American Chemical Society. 125: 1450-1. PMID 12568584 DOI: 10.1021/Ja028046A |
0.71 |
|
| 2002 |
Storek MJ, Suciu A, Verdine GL. 5-amino-2'-deoxyuridine, a novel thymidine analogue for high-resolution footprinting of protein-DNA complexes. Organic Letters. 4: 3867-9. PMID 12599479 DOI: 10.1021/Ol026735L |
0.816 |
|
| 2002 |
He C, Verdine GL. Trapping distinct structural states of a protein/DNA interaction through disulfide crosslinking. Chemistry & Biology. 9: 1297-303. PMID 12498882 DOI: 10.1016/S1074-5521(02)00283-1 |
0.677 |
|
| 2002 |
Harrison BA, Gierasch TM, Neilan C, Pasternak GW, Verdine GL. High-affinity mu opioid receptor ligands discovered by the screening of an exhaustively stereodiversified library of 1,5-enediols. Journal of the American Chemical Society. 124: 13352-3. PMID 12418865 DOI: 10.1021/Ja027150P |
0.547 |
|
| 2002 |
Wolfe JL, Kawate T, Sarracino DA, Zillmann M, Olson J, Stanton VP, Verdine GL. A genotyping strategy based on incorporation and cleavage of chemically modified nucleotides. Proceedings of the National Academy of Sciences of the United States of America. 99: 11073-8. PMID 12169663 DOI: 10.1073/Pnas.162346699 |
0.461 |
|
| 2002 |
Fromme JC, Verdine GL. Structural insights into lesion recognition and repair by the bacterial 8-oxoguanine DNA glycosylase MutM. Nature Structural Biology. 9: 544-52. PMID 12055620 DOI: 10.1038/Nsb809 |
0.808 |
|
| 2002 |
Chen L, Haushalter KA, Lieber CM, Verdine GL. Direct visualization of a DNA glycosylase searching for damage. Chemistry & Biology. 9: 345-50. PMID 11927259 DOI: 10.1016/S1074-5521(02)00120-5 |
0.847 |
|
| 2002 |
Storek MJ, Ernst A, Verdine GL. High-resolution footprinting of sequence-specific protein-DNA contacts. Nature Biotechnology. 20: 183-6. PMID 11821865 DOI: 10.1038/Nbt0202-183 |
0.827 |
|
| 2001 |
Sun LJ, Yim CK, Verdine GL. Chemical communication across the zinc tetrathiolate cluster in Escherichia coli Ada, a metalloactivated DNA repair protein. Biochemistry. 40: 11596-603. PMID 11560510 DOI: 10.1021/Bi011001M |
0.511 |
|
| 2001 |
Nilsen H, Haushalter KA, Robins P, Barnes DE, Verdine GL, Lindahl T. Excision of deaminated cytosine from the vertebrate genome: role of the SMUG1 uracil-DNA glycosylase. The Embo Journal. 20: 4278-86. PMID 11483530 DOI: 10.1093/Emboj/20.15.4278 |
0.837 |
|
| 2001 |
Koide K, Finkelstein JM, Ball Z, Verdine GL. A synthetic library of cell-permeable molecules. Journal of the American Chemical Society. 123: 398-408. PMID 11456541 DOI: 10.1021/Ja0023377 |
0.726 |
|
| 2001 |
Norman DP, Bruner SD, Verdine GL. Coupling of substrate recognition and catalysis by a human base-excision DNA repair protein. Journal of the American Chemical Society. 123: 359-60. PMID 11456534 DOI: 10.1021/Ja003144M |
0.814 |
|
| 2001 |
Harrison BA, Verdine GL. The synthesis of an exhaustively stereodiversified library of cis-1,5 enediols by silyl-tethered ring-closing metathesis. Organic Letters. 3: 2157-9. PMID 11440568 DOI: 10.1021/Ol0159569 |
0.543 |
|
| 2001 |
Nyanguile O, Verdine GL. Template-directed interference footprinting of protein-phosphate contacts in DNA. Organic Letters. 3: 71-4. PMID 11429875 DOI: 10.1021/Ol006792J |
0.423 |
|
| 2001 |
Lin Y, Dötsch V, Wintner T, Peariso K, Myers LC, Penner-Hahn JE, Verdine GL, Wagner G. Structural basis for the functional switch of the E. coli Ada protein. Biochemistry. 40: 4261-71. PMID 11284682 DOI: 10.1021/Bi002109P |
0.446 |
|
| 2000 |
Bruner SD, Norman DP, Fromme JC, Verdine GL. Structural and mechanistic studies on repair of 8-oxoguanine in mammalian cells. Cold Spring Harbor Symposia On Quantitative Biology. 65: 103-11. PMID 12760025 DOI: 10.1101/Sqb.2000.65.103 |
0.789 |
|
| 2000 |
Gierasch TM, Chytil M, Didiuk MT, Park JY, Urban JJ, Nolan SP, Verdine GL. A modular synthetic approach toward exhaustively stereodiversified ligand libraries. Organic Letters. 2: 3999-4002. PMID 11112627 DOI: 10.1021/Ol006560K |
0.632 |
|
| 2000 |
Sekino Y, Bruner SD, Verdine GL. Selective inhibition of herpes simplex virus type-1 uracil-DNA glycosylase by designed substrate analogs. The Journal of Biological Chemistry. 275: 36506-8. PMID 11084051 DOI: 10.1074/Jbc.C000585200 |
0.728 |
|
| 2000 |
Dow LK, Jones DN, Wolfe SA, Verdine GL, Churchill ME. Structural studies of the high mobility group globular domain and basic tail of HMG-D bound to disulfide cross-linked DNA. Biochemistry. 39: 9725-36. PMID 10933789 DOI: 10.1021/Bi000723V |
0.521 |
|
| 2000 |
Park S, Uesugi M, Verdine GL. A second calcineurin binding site on the NFAT regulatory domain. Proceedings of the National Academy of Sciences of the United States of America. 97: 7130-5. PMID 10860980 DOI: 10.1073/Pnas.97.13.7130 |
0.598 |
|
| 2000 |
Huang H, Harrison SC, Verdine GL. Trapping of a catalytic HIV reverse transcriptase*template:primer complex through a disulfide bond. Chemistry & Biology. 7: 355-64. PMID 10801473 DOI: 10.1016/S1074-5521(00)00113-7 |
0.358 |
|
| 2000 |
Bruner SD, Norman DP, Verdine GL. Structural basis for recognition and repair of the endogenous mutagen 8-oxoguanine in DNA. Nature. 403: 859-66. PMID 10706276 DOI: 10.1038/35002510 |
0.84 |
|
| 1999 |
Uesugi M, Verdine GL. The alpha-helical FXXPhiPhi motif in p53: TAF interaction and discrimination by MDM2. Proceedings of the National Academy of Sciences of the United States of America. 96: 14801-6. PMID 10611293 DOI: 10.1073/Pnas.96.26.14801 |
0.318 |
|
| 1999 |
Barrett TE, Schärer OD, Savva R, Brown T, Jiricny J, Verdine GL, Pearl LH. Crystal structure of a thwarted mismatch glycosylase DNA repair complex. The Embo Journal. 18: 6599-609. PMID 10581234 DOI: 10.1093/Emboj/18.23.6599 |
0.526 |
|
| 1999 |
van Aalten DM, Erlanson DA, Verdine GL, Joshua-Tor L. A structural snapshot of base-pair opening in DNA. Proceedings of the National Academy of Sciences of the United States of America. 96: 11809-14. PMID 10518532 DOI: 10.1073/Pnas.96.21.11809 |
0.488 |
|
| 1999 |
Zhang XM, Verdine GL. A small region in HMG I(Y) is critical for cooperation with NF-kappaB on DNA. The Journal of Biological Chemistry. 274: 20235-43. PMID 10400641 DOI: 10.1074/Jbc.274.29.20235 |
0.418 |
|
| 1999 |
Haushalter KA, Todd Stukenberg MW, Kirschner MW, Verdine GL. Identification of a new uracil-DNA glycosylase family by expression cloning using synthetic inhibitors. Current Biology : Cb. 9: 174-85. PMID 10074426 DOI: 10.1016/S0960-9822(99)80087-6 |
0.856 |
|
| 1999 |
Cedar H, Verdine GL. Gene expression. The amazing demethylase. Nature. 397: 568-9. PMID 10050847 DOI: 10.1038/17492 |
0.365 |
|
| 1998 |
Huang H, Chopra R, Verdine GL, Harrison SC. Structure of a covalently trapped catalytic complex of HIV-1 reverse transcriptase: implications for drug resistance. Science (New York, N.Y.). 282: 1669-75. PMID 9831551 DOI: 10.1126/Science.282.5394.1669 |
0.352 |
|
| 1998 |
Chytil M, Peterson BR, Erlanson DA, Verdine GL. The orientation of the AP-1 heterodimer on DNA strongly affects transcriptional potency. Proceedings of the National Academy of Sciences of the United States of America. 95: 14076-81. PMID 9826656 DOI: 10.1073/Pnas.95.24.14076 |
0.799 |
|
| 1998 |
Lau AY, Schärer OD, Samson L, Verdine GL, Ellenberger T. Crystal structure of a human alkylbase-DNA repair enzyme complexed to DNA: mechanisms for nucleotide flipping and base excision. Cell. 95: 249-58. PMID 9790531 DOI: 10.1016/S0092-8674(00)81755-9 |
0.555 |
|
| 1998 |
Bruner SD, Nash HM, Lane WS, Verdine GL. Repair of oxidatively damaged guanine in Saccharomyces cerevisiae by an alternative pathway. Current Biology : Cb. 8: 393-403. PMID 9545197 DOI: 10.1016/S0960-9822(98)70158-7 |
0.704 |
|
| 1998 |
Schärer OD, Nash HM, Jiricny J, Laval J, Verdine GL. Specific binding of a designed pyrrolidine abasic site analog to multiple DNA glycosylases. The Journal of Biological Chemistry. 273: 8592-7. PMID 9535832 DOI: 10.1074/Jbc.273.15.8592 |
0.566 |
|
| 1998 |
Zhou P, Sun LJ, Dötsch V, Wagner G, Verdine GL. Solution structure of the core NFATC1/DNA complex. Cell. 92: 687-96. PMID 9506523 DOI: 10.1016/S0092-8674(00)81136-8 |
0.651 |
|
| 1997 |
Schärer OD, Deng L, Verdine GL. Chemical approaches toward understanding base excision DNA repair. Current Opinion in Chemical Biology. 1: 526-31. PMID 9667887 DOI: 10.1016/S1367-5931(97)80048-8 |
0.641 |
|
| 1997 |
Nyanguile O, Uesugi M, Austin DJ, Verdine GL. A nonnatural transcriptional coactivator. Proceedings of the National Academy of Sciences of the United States of America. 94: 13402-6. PMID 9391036 DOI: 10.1073/Pnas.94.25.13402 |
0.408 |
|
| 1997 |
Cramer P, Larson CJ, Verdine GL, Müller CW. Structure of the human NF-kappaB p52 homodimer-DNA complex at 2.1 A resolution. The Embo Journal. 16: 7078-90. PMID 9384586 DOI: 10.1093/Emboj/16.23.7078 |
0.471 |
|
| 1997 |
Nash HM, Lu R, Lane WS, Verdine GL. The critical active-site amine of the human 8-oxoguanine DNA glycosylase, hOgg1: direct identification, ablation and chemical reconstitution. Chemistry & Biology. 4: 693-702. PMID 9331411 |
0.458 |
|
| 1997 |
Uesugi M, Nyanguile O, Lu H, Levine AJ, Verdine GL. Induced alpha helix in the VP16 activation domain upon binding to a human TAF. Science (New York, N.Y.). 277: 1310-3. PMID 9271577 DOI: 10.1126/Science.277.5330.1310 |
0.373 |
|
| 1997 |
Yoder JA, Soman NS, Verdine GL, Bestor TH. DNA (cytosine-5)-methyltransferases in mouse cells and tissues. Studies with a mechanism-based probe. Journal of Molecular Biology. 270: 385-95. PMID 9237905 DOI: 10.1006/Jmbi.1997.1125 |
0.465 |
|
| 1997 |
Lu R, Nash HM, Verdine GL. A mammalian DNA repair enzyme that excises oxidatively damaged guanines maps to a locus frequently lost in lung cancer. Current Biology : Cb. 7: 397-407. PMID 9197244 DOI: 10.1016/S0960-9822(06)00187-4 |
0.535 |
|
| 1997 |
Verdine GL, Bruner SD. How do DNA repair proteins locate damaged bases in the genome? Chemistry & Biology. 4: 329-34. PMID 9195879 DOI: 10.1016/S1074-5521(97)90123-X |
0.693 |
|
| 1997 |
Sun LJ, Peterson BR, Verdine GL. Dual role of the nuclear factor of activated T cells insert region in DNA recognition and cooperative contacts to activator protein 1. Proceedings of the National Academy of Sciences of the United States of America. 94: 4919-24. PMID 9144165 DOI: 10.1073/Pnas.94.10.4919 |
0.694 |
|
| 1997 |
Schärer OD, Kawate T, Gallinari P, Jiricny J, Verdine GL. Investigation of the mechanisms of DNA binding of the human G/T glycosylase using designed inhibitors. Proceedings of the National Academy of Sciences of the United States of America. 94: 4878-83. PMID 9144158 DOI: 10.1073/Pnas.94.10.4878 |
0.536 |
|
| 1997 |
Wolfe SA, Zhou P, Dötsch V, Chen L, You A, Ho SN, Crabtree GR, Wagner G, Verdine GL. Unusual Rel-like architecture in the DNA-binding domain of the transcription factor NFATc. Nature. 385: 172-6. PMID 8990122 DOI: 10.1038/385172A0 |
0.597 |
|
| 1997 |
Erlanson DA, Glover JNM, Verdine GL. Disulfide cross-linking as a mechanistic probe for the B mutually implies Z transition in DNA [5] Journal of the American Chemical Society. 119: 6927-6928. DOI: 10.1021/Ja9710666 |
0.403 |
|
| 1997 |
Deng L, Scharer OD, Verdine GL. Unusually strong binding of a designed transition-state analog to a base-excision DNA repair protein Journal of the American Chemical Society. 119: 7865-7866. DOI: 10.1021/Ja970828U |
0.565 |
|
| 1997 |
Erlanson DA, Wolfe SA, Chen L, Verdine GL. Selective base-pair destabilization enhances binding of a DNA methyltransferase Tetrahedron. 53: 12041-12056. DOI: 10.1016/S0040-4020(97)00767-9 |
0.514 |
|
| 1996 |
Erlanson DA, Chytil M, Verdine GL. The leucine zipper domain controls the orientation of AP-1 in the NFAT.AP-1.DNA complex. Chemistry & Biology. 3: 981-91. PMID 9000009 DOI: 10.1016/S1074-5521(96)90165-9 |
0.693 |
|
| 1996 |
McCullough AK, Schärer O, Verdine GL, Lloyd RS. Structural determinants for specific recognition by T4 endonuclease V. The Journal of Biological Chemistry. 271: 32147-52. PMID 8943268 DOI: 10.1074/Jbc.271.50.32147 |
0.47 |
|
| 1996 |
Peterson BR, Sun LJ, Verdine GL. A critical arginine residue mediates cooperativity in the contact interface between transcription factors NFAT and AP-1. Proceedings of the National Academy of Sciences of the United States of America. 93: 13671-6. PMID 8942992 DOI: 10.1073/Pnas.93.24.13671 |
0.687 |
|
| 1996 |
Min C, Verdine GL. Immobilized metal affinity chromatography of DNA. Nucleic Acids Research. 24: 3806-10. PMID 8871562 DOI: 10.1093/Nar/24.19.3806 |
0.523 |
|
| 1996 |
Nash HM, Bruner SD, Schärer OD, Kawate T, Addona TA, Spooner E, Lane WS, Verdine GL. Cloning of a yeast 8-oxoguanine DNA glycosylase reveals the existence of a base-excision DNA-repair protein superfamily. Current Biology : Cb. 6: 968-80. PMID 8805338 DOI: 10.1016/S0960-9822(02)00641-3 |
0.764 |
|
| 1996 |
Zhang X, Verdine GL. Mammalian DNA cytosine-5 methyltransferase interacts with p23 protein. Febs Letters. 392: 179-83. PMID 8772199 DOI: 10.1016/0014-5793(96)00810-1 |
0.407 |
|
| 1996 |
Habazettl J, Myers LC, Yuan F, Verdine GL, Wagner G. Backbone dynamics, amide hydrogen exchange, and resonance assignments of the DNA methylphosphotriester repair domain of Escherichia coli Ada using NMR. Biochemistry. 35: 9335-48. PMID 8755711 DOI: 10.1021/Bi952524V |
0.414 |
|
| 1996 |
Labahn J, Schärer OD, Long A, Ezaz-Nikpay K, Verdine GL, Ellenberger TE. Structural basis for the excision repair of alkylation-damaged DNA. Cell. 86: 321-9. PMID 8706136 DOI: 10.1016/S0092-8674(00)80103-8 |
0.564 |
|
| 1996 |
Chytil M, Verdine GL. The Rel family of eukaryotic transcription factors. Current Opinion in Structural Biology. 6: 91-100. PMID 8696978 DOI: 10.1016/S0959-440X(96)80100-X |
0.676 |
|
| 1996 |
Dyer MA, Naidoo R, Hayes RJ, Larson CJ, Verdine GL, Baron MH. A DNA-bending protein interacts with an essential upstream regulatory element of the human embryonic beta-like globin gene. Molecular and Cellular Biology. 16: 829-38. PMID 8622684 DOI: 10.1128/Mcb.16.3.829 |
0.404 |
|
| 1996 |
Stanojevic D, Verdine GL. Site-specific reversible conjugation: A novel concept in peptide-DNA interactions Techniques in Protein Chemistry. 7: 93-99. DOI: 10.1016/S1080-8914(96)80013-5 |
0.484 |
|
| 1995 |
Wolfe SA, Ferentz AE, Grantcharova V, Churchill ME, Verdine GL. Modifying the helical structure of DNA by design: recruitment of an architecture-specific protein to an enforced DNA bend. Chemistry & Biology. 2: 213-21. PMID 9383423 DOI: 10.1016/1074-5521(95)90271-6 |
0.561 |
|
| 1995 |
Myers LC, Jackow F, Verdine GL. Metal dependence of transcriptional switching in Escherichia coli Ada. The Journal of Biological Chemistry. 270: 6664-70. PMID 7896807 DOI: 10.1074/Jbc.270.12.6664 |
0.388 |
|
| 1995 |
Müller CW, Rey FA, Sodeoka M, Verdine GL, Harrison SC. Structure of the NF-kappa B p50 homodimer bound to DNA. Nature. 373: 311-7. PMID 7830764 DOI: 10.1038/373311A0 |
0.603 |
|
| 1995 |
Stanojevic D, Verdine GL. Deconstruction of GCN4/GCRE into a monomeric peptide-DNA complex. Nature Structural Biology. 2: 450-7. PMID 7664107 DOI: 10.1038/Nsb0695-450 |
0.512 |
|
| 1995 |
Reinisch KM, Chen L, Verdine GL, Lipscomb WN. The crystal structure of HaeIII methyltransferase convalently complexed to DNA: an extrahelical cytosine and rearranged base pairing. Cell. 82: 143-53. PMID 7606780 DOI: 10.1016/0092-8674(95)90060-8 |
0.537 |
|
| 1995 |
Chen L, Oakley MG, Glover JN, Jain J, Dervan PB, Hogan PG, Rao A, Verdine GL. Only one of the two DNA-bound orientations of AP-1 found in solution cooperates with NFATp. Current Biology : Cb. 5: 882-9. PMID 7583146 DOI: 10.1016/S0960-9822(95)00178-3 |
0.473 |
|
| 1995 |
Schärer OD, Verdine GL. A designed inhibitor of base-excision DNA repair Journal of the American Chemical Society. 117: 10781-10782. DOI: 10.1021/Ja00148A036 |
0.458 |
|
| 1995 |
Schärer OD, Ortholand JY, Ganesan A, Ezaz-Nikpay K, Verdine GL. Specific binding of the DNA repair enzyme AlkA to a pyrrolidine-based inhibitor Journal of the American Chemical Society. 117: 6623-6624. DOI: 10.1021/Ja00129A039 |
0.591 |
|
| 1994 |
Ezaz-Nikpay K, Verdine GL. The effects of N7-methylguanine on duplex DNA structure. Chemistry & Biology. 1: 235-40. PMID 9383396 DOI: 10.1016/1074-5521(94)90016-7 |
0.569 |
|
| 1994 |
Myers LC, Cushing TD, Wagner G, Verdine GL. Metal-coordination sphere in the methylated Ada protein-DNA co-complex. Chemistry & Biology. 1: 91-7. PMID 9383376 DOI: 10.1016/1074-5521(94)90046-9 |
0.458 |
|
| 1994 |
Liu J, Fan QR, Sodeoka M, Lane WS, Verdine GL. DNA binding by an amino acid residue in the C-terminal half of the Rel homology region. Chemistry & Biology. 1: 47-55. PMID 9383370 DOI: 10.1016/1074-5521(94)90040-X |
0.665 |
|
| 1994 |
Liu J, Sodeoka M, Lane WS, Verdine GL. Evidence for a non-alpha-helical DNA-binding motif in the Rel homology region. Proceedings of the National Academy of Sciences of the United States of America. 91: 908-12. PMID 8302865 DOI: 10.1073/Pnas.91.3.908 |
0.615 |
|
| 1994 |
Verdine GL. The flip side of DNA methylation. Cell. 76: 197-200. PMID 8293456 DOI: 10.1016/0092-8674(94)90326-3 |
0.437 |
|
| 1994 |
Reinisch KM, Chen L, Verdine GL, Lipscomb WN. Crystallization and preliminary crystallographic analysis of a DNA (cytosine-5)-methyltransferase from Haemophilus aegyptius bound covalently to DNA. Journal of Molecular Biology. 238: 626-9. PMID 8176750 DOI: 10.1006/Jmbi.1994.1319 |
0.46 |
|
| 1994 |
Ezaz-Nikpay K, Uchino K, Lerner RE, Verdine GL. Construction of an overproduction vector containing the novel srp (sterically repressed) promoter. Protein Science : a Publication of the Protein Society. 3: 132-8. PMID 8142890 DOI: 10.1002/Pro.5560030117 |
0.316 |
|
| 1994 |
Bestor TH, Verdine GL. DNA methyltransferases. Current Opinion in Cell Biology. 6: 380-9. PMID 7917329 DOI: 10.1016/0955-0674(94)90030-2 |
0.397 |
|
| 1994 |
Myers LC, Verdine GL. DNA repair proteins Current Opinion in Structural Biology. 4: 51-59. DOI: 10.1016/S0959-440X(94)90059-0 |
0.498 |
|
| 1994 |
Myers LC, Verdine GL. DNA repair proteins Current Opinion in Structural Biology. 4: 51-59. DOI: 10.1016/S0959-440X(94)90059-0 |
0.409 |
|
| 1993 |
MacFerrin KD, Chen L, Terranova MP, Schreiber SL, Verdine GL. Overproduction of proteins using expression-cassette polymerase chain reaction. Methods in Enzymology. 217: 79-102. PMID 8474353 DOI: 10.1016/0076-6879(93)17057-C |
0.338 |
|
| 1993 |
Jain J, McCaffrey PG, Miner Z, Kerppola TK, Lambert JN, Verdine GL, Curran T, Rao A. The T-cell transcription factor NFATp is a substrate for calcineurin and interacts with Fos and Jun. Nature. 365: 352-5. PMID 8397339 DOI: 10.1038/365352A0 |
0.456 |
|
| 1993 |
Myers LC, Terranova MP, Ferentz AE, Wagner G, Verdine GL. Repair of DNA methylphosphotriesters through a metalloactivated cysteine nucleophile. Science (New York, N.Y.). 261: 1164-7. PMID 8395079 DOI: 10.1126/Science.8395079 |
0.503 |
|
| 1993 |
Myers LC, Verdine GL, Wagner G. Solution structure of the DNA methyl phosphotriester repair domain of Escherichia coli Ada. Biochemistry. 32: 14089-94. PMID 8260490 DOI: 10.1021/Bi00214A003 |
0.496 |
|
| 1993 |
Wolfe SA, Verdine GL. Ratcheting torsional stress in duplex DNA Journal of the American Chemical Society. 115: 12585-12586. DOI: 10.1021/Ja00079A048 |
0.424 |
|
| 1993 |
Erlanson DA, Chen L, Verdine GL. DNA methylation through a locally unpaired intermediate Journal of the American Chemical Society. 115: 12583-12584. DOI: 10.1021/Ja00079A047 |
0.441 |
|
| 1993 |
Ferentz AE, Keating TA, Verdine GL. Synthesis and characterization of disulfide cross-linked oligonucleotides Journal of the American Chemical Society. 115: 9006-9014. DOI: 10.1021/Ja00073A016 |
0.304 |
|
| 1993 |
Ferentz AE, Wiorkiewicz-Kuczera J, Karplus M, Verdine GL. Molecular dynamics simulations of disulfide cross-linked DNA decamers Journal of the American Chemical Society. 115: 7569-7583. DOI: 10.1021/Ja00070A002 |
0.384 |
|
| 1993 |
Chen L, MacMillan AM, Verdine GL. Mutational separation of DNA binding from catalysis in a DNA cytosine methyltransferase Journal of the American Chemical Society. 115: 5318-5319. DOI: 10.1021/Ja00065A063 |
0.499 |
|
| 1993 |
Sodeoka M, Larson CJ, Chen L, Lane WS, Verdine GL. Limited proteolysis and site-directed mutagenesis of the NF-κB p50 DNA-binding subunit Bioorganic and Medicinal Chemistry Letters. 3: 1095-1100. DOI: 10.1016/S0960-894X(00)80294-2 |
0.569 |
|
| 1993 |
Sodeoka M, Larson CJ, Chen L, LeClair KP, Verdine GL. A multifunctional plasmid for protein expression by ECPCR: overproduction of the p50 subunit of NF-κB Bioorganic and Medicinal Chemistry Letters. 3: 1089-1094. DOI: 10.1016/S0960-894X(00)80293-0 |
0.531 |
|
| 1992 |
Larson CJ, Verdine GL. A high-capacity column for affinity purification of sequence-specific DNA-binding proteins. Nucleic Acids Research. 20: 3525. PMID 1630934 DOI: 10.1093/Nar/20.13.3525 |
0.443 |
|
| 1992 |
Myers LC, Terranova MP, Nash HM, Markus MA, Verdine GL. Zinc binding by the methylation signaling domain of the Escherichia coli Ada protein. Biochemistry. 31: 4541-7. PMID 1581309 DOI: 10.1021/Bi00134A002 |
0.408 |
|
| 1992 |
Hayashibara KC, Verdine GL. Template-directed interference footprinting of cytosine contacts in a protein-DNA complex: potent interference by 5-aza-2'-deoxycytidine. Biochemistry. 31: 11265-73. PMID 1280158 DOI: 10.1021/Bi00161A002 |
0.538 |
|
| 1992 |
Ferentz AE, Verdine GL. Amlnolysis of 2-deoxyinosine aryl ethers: Nucleoside model studies for the synthesis of functionally tethered oligonucleotides Nucleosides and Nucleotides. 11: 1749-1763. DOI: 10.1080/07328319208017821 |
0.308 |
|
| 1992 |
MacMillan AM, Chen L, Verdine GL. Synthesis of an oligonucleotide suicide substrate for DNA methyltransferases Journal of Organic Chemistry. 57: 2989-2991. DOI: 10.1021/Jo00037A006 |
0.505 |
|
| 1992 |
Ezaz-Nikpay K, Verdine GL. Aberrantly methylated DNA: site-specific introduction of N-7-methyl-2'-deoxyguanosine into the Dickerson/Drew dodecamer. Journal of the American Chemical Society. 114: 6562-6563. DOI: 10.1021/Ja00042A048 |
0.386 |
|
| 1992 |
Liu J, Verdine GL. Synthesis of photoactive DNA: incorporation of 8-bromo-2′-deoxyadenosine into synthetic oligodeoxynucleotides Tetrahedron Letters. 33: 4265-4268. DOI: 10.1016/S0040-4039(00)74234-1 |
0.355 |
|
| 1991 |
Chen L, MacMillan AM, Chang W, Ezaz-Nikpay K, Lane WS, Verdine GL. Direct identification of the active-site nucleophile in a DNA (cytosine-5)-methyltransferase. Biochemistry. 30: 11018-25. PMID 1932026 DOI: 10.1021/Bi00110A002 |
0.474 |
|
| 1991 |
Hayashibara KC, Verdine GL. Template-directed interference footprinting of protein-guanine contacts in DNA Journal of the American Chemical Society. 113: 5104-5106. DOI: 10.1021/Ja00013A080 |
0.498 |
|
| 1991 |
Macmillan AM, Verdine GL. Engineering tethered DNA molecules by the convertible nucleoside approach Tetrahedron. 47: 2603-2616. DOI: 10.1016/S0040-4020(01)81793-2 |
0.468 |
|
| 1990 |
MacFerrin KD, Terranova MP, Schreiber SL, Verdine GL. Overproduction and dissection of proteins by the expression-cassette polymerase chain reaction. Proceedings of the National Academy of Sciences of the United States of America. 87: 1937-41. PMID 2408046 DOI: 10.1073/Pnas.87.5.1937 |
0.304 |
|
| 1990 |
Standaert RF, Galat A, Verdine GL, Schreiber SL. Molecular cloning and overexpression of the human FK506-binding protein FKBP. Nature. 346: 671-4. PMID 1696686 DOI: 10.1038/346671A0 |
0.367 |
|
| 1990 |
MacMillan AM, Verdine GL. Synthesis of functionally tethered oligodeoxynucleotides by the convertible nucleoside approach Journal of Organic Chemistry. 55: 5931-5933. DOI: 10.1021/Jo00311A005 |
0.333 |
|
| 1989 |
Shewchuk LM, Verdine GL, Walsh CT. Transcriptional switching by the metalloregulatory MerR protein: initial characterization of DNA and mercury (II) binding activities. Biochemistry. 28: 2331-9. PMID 2719955 DOI: 10.1021/Bi00431A052 |
0.545 |
|
| 1989 |
Shewchuk LM, Verdine GL, Nash H, Walsh CT. Mutagenesis of the cysteines in the metalloregulatory protein MerR indicates that a metal-bridged dimer activates transcription. Biochemistry. 28: 6140-5. PMID 2551364 DOI: 10.1021/Bi00441A002 |
0.477 |
|
| 1988 |
Walsh CT, Distefano MD, Moore MJ, Shewchuk LM, Verdine GL. Molecular basis of bacterial resistance to organomercurial and inorganic mercuric salts. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 2: 124-30. PMID 3277886 DOI: 10.1096/Fasebj.2.2.3277886 |
0.717 |
|
| 1987 |
Tomasz M, Lipman R, Lee MS, Verdine GL, Nakanishi K. Reaction of acid-activated mitomycin C with calf thymus DNA and model guanines: elucidation of the base-catalyzed degradation of N7-alkylguanine nucleosides. Biochemistry. 26: 2010-27. PMID 3109476 DOI: 10.1021/Bi00381A034 |
0.466 |
|
| 1987 |
Tomasz M, Lipman R, Chowdary D, Pawlak J, Verdine GL, Nakanishi K. Isolation and structure of a covalent cross-link adduct between mitomycin C and DNA. Science (New York, N.Y.). 235: 1204-8. PMID 3103215 DOI: 10.1126/Science.3103215 |
0.743 |
|
| 1987 |
Verdine GL, McGuinness BF, Nakanishi K, Tomasz M. Unusual CIS stereoselectivity in an aziridine cleavage reaction of mitomycin C Heterocycles. 25: 577-587. DOI: 10.3987/S-1987-01-0577 |
0.373 |
|
| 1986 |
Tomasz M, Lipman R, Verdine GL, Nakanishi K. Reassignment of the guanine-binding mode of reduced mitomycin C. Biochemistry. 25: 4337-44. PMID 3092855 DOI: 10.1021/Bi00363A024 |
0.495 |
|
| 1986 |
Tomasz M, Chowdary D, Lipman R, Shimotakahara S, Veiro D, Walker V, Verdine GL. Reaction of DNA with chemically or enzymatically activated mitomycin C: isolation and structure of the major covalent adduct. Proceedings of the National Academy of Sciences of the United States of America. 83: 6702-6. PMID 3018744 DOI: 10.1073/Pnas.83.18.6702 |
0.496 |
|
| 1986 |
VERDINE GL, NAKANISHI K. ChemInform Abstract: Use of Differential Second-Derivative UV and FTIR Spectroscopy in Structural Studies of Multichromophoric Compounds. Chemischer Informationsdienst. 17. DOI: 10.1002/chin.198605080 |
0.318 |
|
| 1985 |
Verdine GL, Nakanishi K. p-Dimethylaminocinnamate, a new red-shifted chromophore for use in the exciton chirality method. Its application to mitomycin C Journal of the Chemical Society, Chemical Communications. 1093-1095. DOI: 10.1039/C39850001093 |
0.368 |
|
| 1985 |
Tomasz M, Lipman R, Verdine G, Nakanishi K. Nature of the destruction of deoxyguanosine residues by mitomycin C Journal of the American Chemical Society. 107: 6120-6121. DOI: 10.1021/Ja00307A057 |
0.401 |
|
| 1985 |
Verdine GL, Nakanishi K. Use of differential second-derivative UV and FTIR spectroscopy in structural studies of multichromophoric compounds Journal of the American Chemical Society. 107: 6118-6120. DOI: 10.1021/Ja00307A056 |
0.406 |
|
| 1985 |
Tomasz M, Lipman R, Verdine GL, Nakanishi K. Nature of the destruction of deoxyguanosine residues by mitomycin C activated by mild acid pH Journal of the American Chemical Society. 107: 6120-6123. DOI: 10.1002/Chin.198605105 |
0.392 |
|
| 1985 |
TOMASZ M, JUNG M, VERDINE G, NAKANISHI K. ChemInform Abstract: CIRCULAR DICHROISM SPECTROSCOPY AS A PROBE FOR THE STEREOCHEMISTRY OF AZIRIDINE CLEAVAGE REACTIONS OF MITOMYCIN C. APPLICATION TO ADDUCTS OF MITOMYCIN WITH DNA CONSTITUENTS Chemischer Informationsdienst. 16. DOI: 10.1002/chin.198512097 |
0.473 |
|
| 1984 |
Nakanishi K, Kuroyanagi M, Nambu H, Oltz EM, Takeda R, Verdine GL, Zask A. Recent applications of circular dichroism to structural problems, especially oligosaccharide structures Pure and Applied Chemistry. 56: 1031-1048. DOI: 10.1351/Pac198456081031 |
0.749 |
|
| 1984 |
Tomasz M, Jung M, Verdine G, Nakanishi K. Circular dichroism spectroscopy as a probe for the stereochemistry of aziridine cleavage reactions of mitomycin C. Application to adducts of mitomycin with DNA constituents Journal of the American Chemical Society. 106: 7367-7370. DOI: 10.1021/Ja00336A012 |
0.543 |
|
| 1984 |
Tomasz M, Jung M, Verdine G, Nakanishi K. Circular dichroism spectroscopy as a probe for the stereochemistry of aziridine cleavage reactions of mitomycin C. Application to adducts of mitomycin with DNA constituents Journal of the American Chemical Society. 106: 7367-7370. DOI: 10.1021/JA00336A012 |
0.309 |
|
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