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Henk den Bakker - Publications

Affiliations: 
2005-2007 Cornell University, Ithaca, NY, United States 
 2014-2017 Texas Tech University, Lubbock, TX 
 2017- University of Georgia, Athens, Athens, GA, United States 
Area:
microbial evolution, bacterial genomics, microbial genomics, foodborne pathogens
Website:
https://www.griffin.uga.edu/people/hendrik-den-bakker
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13 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Novoa Rama E, Bailey M, Kumar S, Leone C, den Bakker HC, Thippareddi H, Singh M. Characterizing the gut microbiome of broilers raised under conventional and no antibiotics ever practices. Poultry Science. 102: 102832. PMID 37343348 DOI: 10.1016/j.psj.2023.102832  0.302
2018 Erickson MC, Liao JY, Payton AS, Cook PW, Den Bakker HC, Bautista J, Pérez JCD. Pre-harvest internalization and surface survival of Salmonella and Escherichia coli O157:H7 sprayed onto different lettuce cultivars under field and growth chamber conditions. International Journal of Food Microbiology. 291: 197-204. PMID 30551016 DOI: 10.1016/j.ijfoodmicro.2018.12.001  0.364
2015 Bergholz TM, den Bakker HC, Katz LS, Silk BJ, Jackson KA, Kucerova Z, Joseph LA, Turnsek M, Gladney LM, Halpin JL, Xavier K, Gossack J, Ward TJ, Frace M, Tarr CL. Evolutionary Relationships of Outbreak-associated Listeria monocytogenes Strains of Serotypes 1/2a and 1/2b Determined by Whole Genome Sequencing. Applied and Environmental Microbiology. PMID 26590286 DOI: 10.1128/Aem.02440-15  0.364
2015 Toomer KH, Chen X, Naito M, Mondo SJ, den Bakker HC, VanKuren NW, Lekberg Y, Morton JB, Pawlowska TE. Molecular evolution patterns reveal life history features of mycoplasma-related endobacteria associated with arbuscular mycorrhizal fungi. Molecular Ecology. 24: 3485-500. PMID 26011293 DOI: 10.1111/Mec.13250  0.336
2014 Deng X, Desai PT, den Bakker HC, Mikoleit M, Tolar B, Trees E, Hendriksen RS, Frye JG, Porwollik S, Weimer BC, Wiedmann M, Weinstock GM, Fields PI, McClelland M. Genomic epidemiology of Salmonella enterica serotype Enteritidis based on population structure of prevalent lineages. Emerging Infectious Diseases. 20: 1481-9. PMID 25147968 DOI: 10.3201/Eid2009.131095  0.367
2013 Switt AI, den Bakker HC, Vongkamjan K, Hoelzer K, Warnick LD, Cummings KJ, Wiedmann M. Salmonella bacteriophage diversity reflects host diversity on dairy farms. Food Microbiology. 36: 275-85. PMID 24010608 DOI: 10.1016/J.Fm.2013.06.014  0.307
2013 Vankuren NW, den Bakker HC, Morton JB, Pawlowska TE. Ribosomal RNA gene diversity, effective population size, and evolutionary longevity in asexual glomeromycota. Evolution; International Journal of Organic Evolution. 67: 207-24. PMID 23289573 DOI: 10.1111/J.1558-5646.2012.01747.X  0.652
2011 den Bakker HC, Moreno Switt AI, Govoni G, Cummings CA, Ranieri ML, Degoricija L, Hoelzer K, Rodriguez-Rivera LD, Brown S, Bolchacova E, Furtado MR, Wiedmann M. Genome sequencing reveals diversification of virulence factor content and possible host adaptation in distinct subpopulations of Salmonella enterica. Bmc Genomics. 12: 425. PMID 21859443 DOI: 10.1186/1471-2164-12-425  0.415
2010 den Bakker HC, Cummings CA, Ferreira V, Vatta P, Orsi RH, Degoricija L, Barker M, Petrauskene O, Furtado MR, Wiedmann M. Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss. Bmc Genomics. 11: 688. PMID 21126366 DOI: 10.1186/1471-2164-11-688  0.305
2010 den Bakker HC, Vankuren NW, Morton JB, Pawlowska TE. Clonality and recombination in the life history of an asexual arbuscular mycorrhizal fungus. Molecular Biology and Evolution. 27: 2474-86. PMID 20566475 DOI: 10.1093/Molbev/Msq155  0.711
2008 den Bakker HC, Didelot X, Fortes ED, Nightingale KK, Wiedmann M. Lineage specific recombination rates and microevolution in Listeria monocytogenes. Bmc Evolutionary Biology. 8: 277. PMID 18842152 DOI: 10.1186/1471-2148-8-277  0.395
2007 Osmundson TW, Halling RE, den Bakker HC. Morphological and molecular evidence supporting an arbutoid mycorrhizal relationship in the Costa Rican páramo. Mycorrhiza. 17: 217-22. PMID 17216498 DOI: 10.1007/s00572-006-0098-x  0.326
2004 Den Bakker HC, Zuccarello GC, Kuyper TW, Noordeloos ME. Evolution and host specificity in the ectomycorrhizal genus Leccinum. The New Phytologist. 163: 201-215. PMID 33873790 DOI: 10.1111/j.1469-8137.2004.01090.x  0.327
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