Brian J. Drawert, Ph.D.

2013 Computer Science University of California, Santa Barbara, Santa Barbara, CA, United States 
Systems Biology and Discovery Tools
"Brian Drawert"


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Linda Petzold grad student 2013 UC Santa Barbara
 (Spatial Stochastic Simulation of Biochemical Systems.)
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Doering GN, Sheehy KA, Lichtenstein JLL, et al. (2019) Sources of intraspecific variation in the collective tempo and synchrony of ant societies. Behavioral Ecology : Official Journal of the International Society For Behavioral Ecology. 30: 1682-1690
Drawert B, Jacob B, Li Z, et al. (2019) Validation data for a hybrid smoothed dissipative particle dynamics (SDPD) spatial stochastic simulation algorithm (sSSA) method. Data in Brief. 22: 11-15
Drawert B, Griesemer M, Petzold LR, et al. (2017) Using stochastic epidemiological models to evaluate conservation strategies for endangered amphibians. Journal of the Royal Society, Interface. 14
Drawert B, Trogdon M, Toor S, et al. (2016) MOLNs: A CLOUD PLATFORM FOR INTERACTIVE, REPRODUCIBLE, AND SCALABLE SPATIAL STOCHASTIC COMPUTATIONAL EXPERIMENTS IN SYSTEMS BIOLOGY USING PyURDME. Siam Journal On Scientific Computing : a Publication of the Society For Industrial and Applied Mathematics. 38: C179-C202
Drawert B, Hellander A, Bales B, et al. (2016) Stochastic Simulation Service: Bridging the Gap between the Computational Expert and the Biologist. Plos Computational Biology. 12: e1005220
Drawert B, Hellander S, Trogdon M, et al. (2016) A framework for discrete stochastic simulation on 3D moving boundary domains. The Journal of Chemical Physics. 145: 184113
Hellander A, Lawson MJ, Drawert B, et al. (2014) Local error estimates for adaptive simulation of the Reaction-Diffusion Master Equation via operator splitting. Journal of Computational Physics. 266: 89-100
Lawson MJ, Drawert B, Khammash M, et al. (2013) Spatial stochastic dynamics enable robust cell polarization. Plos Computational Biology. 9: e1003139
Drawert B, Engblom S, Hellander A. (2012) URDME: a modular framework for stochastic simulation of reaction-transport processes in complex geometries Bmc Systems Biology. 6: 76-76
Drawert B, Lawson MJ, Petzold L, et al. (2010) The diffusive finite state projection algorithm for efficient simulation of the stochastic reaction-diffusion master equation. The Journal of Chemical Physics. 132: 074101
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