Jie Liang
Affiliations: | Bioengineering | University of Illinois at Chicago, Chicago, IL, United States |
Area:
Bioinformatics Biology, General Biophysics, BiochemistryGoogle:
"Jie Liang"Parents
Sign in to add mentor| Thomas G. Ebrey | grad student | 1994 | UIUC (Physics Tree) |
| Herbert Edelsbrunner | post-doc | Duke (MathTree) | |
| Clare K. Woodward | post-doc | UMN (Chemistry Tree) |
Children
Sign in to add trainee| Ke Tang | grad student | ||
| Thomas A. Binkowski | grad student | 2004 | University of Illinois, Chicago |
| Jinfeng Zhang | grad student | 2004 | University of Illinois, Chicago |
| Yan Y. Tseng | grad student | 2006 | University of Illinois, Chicago |
| Ronald Jackups | grad student | 2008 | University of Illinois, Chicago |
| Hsiao-Mei Lu | grad student | 2010 | University of Illinois, Chicago |
| Alexis A. Rodriguez | grad student | 2010 | University of Illinois, Chicago |
| Joseph Dundas | grad student | 2011 | University of Illinois, Chicago |
| Hammad Naveed | grad student | 2012 | University of Illinois, Chicago |
| Gamze Gursoy | grad student | 2009-2016 | University of Illinois, Chicago |
BETA: Related publications
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Publications
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| Ye B, Tian W, Wang B, et al. (2024) CASTpFold: Computed Atlas of Surface Topography of the universe of protein Folds. Nucleic Acids Research |
| Ye B, Tian W, Wang B, et al. (2024) CASTpFold: Computed Atlas of Surface Topography of the universe of protein Folds. Biorxiv : the Preprint Server For Biology |
| Tian W, Lin M, Tang K, et al. (2023) 3D-BMPP: 3D Beta-Barrel Membrane Protein Predictor. Methods in Molecular Biology (Clifton, N.J.). 2627: 321-328 |
| Sun Q, Perez-Rathke A, Czajkowsky DM, et al. (2021) High-resolution single-cell 3D-models of chromatin ensembles during Drosophila embryogenesis. Nature Communications. 12: 205 |
| Perez-Rathke A, Fahie MAV, Chisholm CM, et al. (2021) Simulation of pH-Dependent, Loop-Based Membrane Protein Gating Using Pretzel. Methods in Molecular Biology (Clifton, N.J.). 2186: 159-169 |
| Bausewein T, Naveed H, Liang J, et al. (2020) The structure of the TOM core complex in the mitochondrial outer membrane. Biological Chemistry |
| Perez-Rathke A, Sun Q, Wang B, et al. (2020) CHROMATIX: computing the functional landscape of many-body chromatin interactions in transcriptionally active loci from deconvolved single cells. Genome Biology. 21: 13 |
| Mali S, Perez-Rathke A, Sun Q, et al. (2020) Chromatin Folding under Different Nuclear Confinement Biophysical Journal. 118 |
| Perez-Rathke A, Sun Q, Wang B, et al. (2020) Landscape of Multivalent Chromatin Interactions in Transcriptionally Active LOCI Biophysical Journal. 118 |
| Wang B, Lei X, Tian W, et al. (2020) Atom Contact Profile by Alpha-Shape Improves Prediction of Effects of Missense Variant Biophysical Journal. 118 |