Arjun Raj

Bioengineering University of Pennsylvania, Philadelphia, PA, United States 
Cell Biology, Biomedical Engineering
"Arjun Raj"


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Sanjay Tyagi grad student (Physics Tree)
Alexander van Oudenaarden grad student (Evolution Tree)


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Caroline Bartman grad student (Cell Biology Tree)
Paul Ginart grad student Penn
Chris Hsiung grad student Penn
Olivia Padovan-Merhar grad student Penn
Sydney Shaffer grad student Penn
Marshall J. Levesque grad student 2013 Penn
Yogesh Goyal post-doc (Chemistry Tree)
Rohan P. Joshi post-doc Penn (Cell Biology Tree)
Amanpreet Kaur post-doc Penn
Hedia Maamar post-doc Penn
Gautham Nair post-doc Penn
Sara H Rouhanifard post-doc Penn
Orsolya Symmons post-doc Penn
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Schuh L, Saint-Antoine M, Sanford EM, et al. (2020) Gene Networks with Transcriptional Bursting Recapitulate Rare Transient Coordinated High Expression States in Cancer. Cell Systems. 10: 363-378.e12
Kim JH, Rege M, Valeri J, et al. (2019) LADL: light-activated dynamic looping for endogenous gene expression control. Nature Methods
Raj A, Rinn JL. (2019) Illuminating Genomic Dark Matter with RNA Imaging. Cold Spring Harbor Perspectives in Biology. 11
Symmons O, Chang M, Mellis IA, et al. (2019) Allele-specific RNA imaging shows that allelic imbalances can arise in tissues through transcriptional bursting. Plos Genetics. 15: e1007874
Rouhanifard SH, Mellis IA, Dunagin M, et al. (2019) Amendments: Author Correction: ClampFISH detects individual nucleic acid molecules using click chemistry-based amplification. Nature Biotechnology. 37: 102
Bartman CR, Hamagami N, Keller CA, et al. (2018) Transcriptional Burst Initiation and Polymerase Pause Release Are Key Control Points of Transcriptional Regulation. Molecular Cell
Rouhanifard SH, Mellis IA, Dunagin M, et al. (2018) ClampFISH detects individual nucleic acid molecules using click chemistry-based amplification. Nature Biotechnology
Kaur A, Ecker BL, Douglass SM, et al. (2018) Remodeling of the collagen matrix in aging skin promotes melanoma metastasis and affects immune cell motility. Cancer Discovery
Wang J, Huang M, Torre E, et al. (2018) Gene expression distribution deconvolution in single-cell RNA sequencing. Proceedings of the National Academy of Sciences of the United States of America
Huang M, Wang J, Torre E, et al. (2018) SAVER: gene expression recovery for single-cell RNA sequencing. Nature Methods
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