Adam P. Arkin
Affiliations: | University of California, Berkeley, Berkeley, CA, United States |
Area:
cellular regulatory networksWebsite:
http://www.hhmi.org/research/investigators/arkin_bio.htmlGoogle:
"Adam Arkin"Cross-listing: Chemistry Tree
Parents
Sign in to add mentor| Douglas C. Youvan | grad student | 1992 | MIT (Chemistry Tree) | |
| (An application of artificial intelligence and machine vision to protein engineering) | ||||
| John Ross | post-doc | Stanford (Chemistry Tree) | ||
Children
Sign in to add trainee| Sriram Kosuri | research assistant | (Chemistry Tree) | |
| Leor S. Weinberger | grad student | 2004 | UC Berkeley (Chemistry Tree) |
| Keith A. Erickson | grad student | 2005 | UCSF (Chemistry Tree) |
| Serguei G. Plyasunov | grad student | 2005 | UC Berkeley (Chemistry Tree) |
| Robin E. Osterhout | grad student | 2006 | UC Berkeley (Chemistry Tree) |
| Timothy S. Ham | grad student | 2007 | UCSF (Chemistry Tree) |
| John C. Burnett | grad student | 2008 | UC Berkeley (Cell & Gene Therapy Tree) |
| Joshua A. Hug | grad student | 2011 | UC Berkeley (Chemistry Tree) |
| Lei Stanley Qi | grad student | 2012 | UC Berkeley (Chemistry Tree) |
| Weston R. Whitaker | grad student | 2012 | UC Berkeley (Chemistry Tree) |
| Jonathan E. Foley | grad student | 2013 | UC Berkeley (Cell & Gene Therapy Tree) |
| David Chen | grad student | 2014 | UC Berkeley (Chemistry Tree) |
| Harneet Singh Rishi | grad student | 2014-2019 | UC Berkeley / LBNL (Chemistry Tree) |
| Eric J. Alm | post-doc | UC Berkeley | |
| John Christopher Anderson | post-doc | UC Berkeley/LBNL (Chemistry Tree) | |
| Julius B. Lucks | post-doc | (Physics Tree) | |
| Christopher A. Voigt | post-doc | UC Berkeley/LBNL (Chemistry Tree) | |
| Chang C. Liu | post-doc | 2009-2012 | UC Berkeley (Chemistry Tree) |
Collaborators
Sign in to add collaborator| Paul David Adams | collaborator | UC Berkeley (Chemistry Tree) |
BETA: Related publications
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Publications
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| Ning D, Wang Y, Fan Y, et al. (2024) Environmental stress mediates groundwater microbial community assembly. Nature Microbiology |
| Paradis CJ, Miller JI, Moon JW, et al. (2021) Sustained ability of a natural microbial community to remove nitrate from groundwater. Ground Water |
| Kothari A, Roux S, Zhang H, et al. (2021) Ecogenomics of Groundwater Phages Suggests Niche Differentiation Linked to Specific Environmental Tolerance. Msystems. e0053721 |
| Lui LM, Majumder EL, Smith HJ, et al. (2021) Mechanism Across Scales: A Holistic Modeling Framework Integrating Laboratory and Field Studies for Microbial Ecology. Frontiers in Microbiology. 12: 642422 |
| Qi LS, Larson MH, Gilbert LA, et al. (2021) Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression. Cell. 184: 844 |
| Ge X, Thorgersen MP, Poole FL, et al. (2020) Characterization of a Metal-Resistant Strain With a High Molybdate Affinity ModA From Contaminated Sediments at the Oak Ridge Reservation. Frontiers in Microbiology. 11: 587127 |
| Ge X, Thorgersen MP, Poole FL, et al. (2020) Draft Genome Sequence of sp. Strain EB106-08-02-XG196, Isolated from High-Nitrate-Contaminated Sediment. Microbiology Resource Announcements. 9 |
| Mutalik VK, Adler BA, Rishi HS, et al. (2020) High-throughput mapping of the phage resistance landscape in E. coli. Plos Biology. 18: e3000877 |
| Kempher ML, Tao X, Song R, et al. (2020) Effects of Genetic and Physiological Divergence on the Evolution of a Sulfate-Reducing Bacterium under Conditions of Elevated Temperature. Mbio. 11 |
| Mejía-Almonte C, Busby SJW, Wade JT, et al. (2020) Redefining fundamental concepts of transcription initiation in bacteria. Nature Reviews. Genetics |