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Ovijit Chaudhuri - Publications

Affiliations: 
2009 University of California, San Francisco, San Francisco, CA 
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33 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Lee JY, Dominguez AA, Nam S, Stowers RS, Qi LS, Chaudhuri O. Identification of cell context-dependent YAP-associated proteins reveals β and β integrin mediate YAP translocation independently of cell spreading. Scientific Reports. 9: 17188. PMID 31748579 DOI: 10.1038/s41598-019-53659-4  0.32
2019 Nam S, Gupta VK, Lee HP, Lee JY, Wisdom KM, Varma S, Flaum EM, Davis C, West RB, Chaudhuri O. Cell cycle progression in confining microenvironments is regulated by a growth-responsive TRPV4-PI3K/Akt-p27 signaling axis. Science Advances. 5: eaaw6171. PMID 31457089 DOI: 10.1126/sciadv.aaw6171  0.32
2019 Stowers RS, Shcherbina A, Israeli J, Gruber JJ, Chang J, Nam S, Rabiee A, Teruel MN, Snyder MP, Kundaje A, Chaudhuri O. Matrix stiffness induces a tumorigenic phenotype in mammary epithelium through changes in chromatin accessibility. Nature Biomedical Engineering. PMID 31285581 DOI: 10.1038/s41551-019-0420-5  0.32
2019 Chen Y, Nam S, Chaudhuri O, Huang HC. The evolution of spindles and their mechanical implications for cancer metastasis. Cell Cycle (Georgetown, Tex.). 1-5. PMID 31234701 DOI: 10.1080/15384101.2019.1632137  0.32
2019 Lee JY, Chang JK, Dominguez AA, Lee HP, Nam S, Chang J, Varma S, Qi LS, West RB, Chaudhuri O. YAP-independent mechanotransduction drives breast cancer progression. Nature Communications. 10: 1848. PMID 31015465 DOI: 10.1038/s41467-019-09755-0  0.32
2019 Nam S, Stowers R, Lou J, Xia Y, Chaudhuri O. Varying PEG density to control stress relaxation in alginate-PEG hydrogels for 3D cell culture studies. Biomaterials. 200: 15-24. PMID 30743050 DOI: 10.1016/j.biomaterials.2019.02.004  0.32
2018 Wisdom KM, Adebowale K, Chang J, Lee JY, Nam S, Desai R, Rossen NS, Rafat M, West RB, Hodgson L, Chaudhuri O. Matrix mechanical plasticity regulates cancer cell migration through confining microenvironments. Nature Communications. 9: 4144. PMID 30297715 DOI: 10.1038/s41467-018-06641-z  0.32
2018 Ban E, Franklin JM, Nam S, Smith LR, Wang H, Wells RG, Chaudhuri O, Liphardt JT, Shenoy VB. Mechanisms of Plastic Deformation in Collagen Networks Induced by Cellular Forces. Biophysical Journal. 114: 450-461. PMID 29401442 DOI: 10.1016/j.bpj.2017.11.3739  0.32
2017 Lou J, Stowers R, Nam S, Xia Y, Chaudhuri O. Stress relaxing hyaluronic acid-collagen hydrogels promote cell spreading, fiber remodeling, and focal adhesion formation in 3D cell culture. Biomaterials. 154: 213-222. PMID 29132046 DOI: 10.1016/j.biomaterials.2017.11.004  0.32
2017 Ayala P, Dai E, Hawes M, Liu L, Chaudhuri O, Haller CA, Mooney DJ, Chaikof EL. Evaluation of a bioengineered construct for tissue engineering applications. Journal of Biomedical Materials Research. Part B, Applied Biomaterials. PMID 29130596 DOI: 10.1002/jbm.b.34042  0.52
2017 Lee HP, Gu L, Mooney DJ, Levenston ME, Chaudhuri O. Mechanical confinement regulates cartilage matrix formation by chondrocytes. Nature Materials. PMID 28967913 DOI: 10.1038/nmat4993  0.52
2017 Liu AP, Chaudhuri O, Parekh SH. New advances in probing cell-extracellular matrix interactions. Integrative Biology : Quantitative Biosciences From Nano to Macro. PMID 28352896 DOI: 10.1039/c6ib00251j  0.88
2016 Nam S, Lee J, Brownfield DG, Chaudhuri O. Viscoplasticity Enables Mechanical Remodeling of Matrix by Cells. Biophysical Journal. 111: 2296-2308. PMID 27851951 DOI: 10.1016/j.bpj.2016.10.002  0.32
2016 Branco da Cunha C, Klumpers DD, Koshy ST, Weaver JC, Chaudhuri O, Seruca R, Carneiro F, Granja PL, Mooney DJ. CD44 alternative splicing in gastric cancer cells is regulated by culture dimensionality and matrix stiffness. Biomaterials. 98: 152-162. PMID 27187279 DOI: 10.1016/j.biomaterials.2016.04.016  0.52
2016 Nam S, Hu KH, Butte MJ, Chaudhuri O. Strain-enhanced stress relaxation impacts nonlinear elasticity in collagen gels. Proceedings of the National Academy of Sciences of the United States of America. PMID 27140623 DOI: 10.1073/pnas.1523906113  0.32
2015 Chaudhuri O, Gu L, Klumpers D, Darnell M, Bencherif SA, Weaver JC, Huebsch N, Lee HP, Lippens E, Duda GN, Mooney DJ. Hydrogels with tunable stress relaxation regulate stem cell fate and activity. Nature Materials. PMID 26618884 DOI: 10.1038/nmat4489  0.96
2015 Huebsch N, Lippens E, Lee K, Mehta M, Koshy ST, Darnell MC, Desai RM, Madl CM, Xu M, Zhao X, Chaudhuri O, Verbeke C, Kim WS, Alim K, Mammoto A, et al. Matrix elasticity of void-forming hydrogels controls transplanted-stem-cell-mediated bone formation. Nature Materials. PMID 26366848 DOI: 10.1038/nmat4407  0.96
2015 Ayala P, Caves J, Dai E, Siraj L, Liu L, Chaudhuri O, Haller CA, Mooney DJ, Chaikof EL. Engineered composite fascia for stem cell therapy in tissue repair applications. Acta Biomaterialia. 26: 1-12. PMID 26283165 DOI: 10.1016/j.actbio.2015.08.012  0.96
2015 Chaudhuri O, Gu L, Darnell M, Klumpers D, Bencherif SA, Weaver JC, Huebsch N, Mooney DJ. Substrate stress relaxation regulates cell spreading. Nature Communications. 6: 6364. PMID 25695512 DOI: 10.1038/ncomms7365  0.96
2015 Miserez A, Weaver JC, Chaudhuri O. Biological materials and molecular biomimetics-filling up the empty soft materials space for tissue engineering applications Journal of Materials Chemistry B. 3: 15-24. DOI: 10.1039/c4tb01267d  0.96
2014 Branco da Cunha C, Klumpers DD, Li WA, Koshy ST, Weaver JC, Chaudhuri O, Granja PL, Mooney DJ. Influence of the stiffness of three-dimensional alginate/collagen-I interpenetrating networks on fibroblast biology. Biomaterials. 35: 8927-36. PMID 25047628 DOI: 10.1016/j.biomaterials.2014.06.047  0.96
2014 Priddy LB, Chaudhuri O, Stevens HY, Krishnan L, Uhrig BA, Willett NJ, Guldberg RE. Oxidized alginate hydrogels for bone morphogenetic protein-2 delivery in long bone defects. Acta Biomaterialia. 10: 4390-9. PMID 24954001 DOI: 10.1016/j.actbio.2014.06.015  0.96
2014 Chaudhuri O, Koshy ST, Branco da Cunha C, Shin JW, Verbeke CS, Allison KH, Mooney DJ. Extracellular matrix stiffness and composition jointly regulate the induction of malignant phenotypes in mammary epithelium. Nature Materials. 13: 970-8. PMID 24930031 DOI: 10.1038/nmat4009  0.96
2012 Sun JY, Zhao X, Illeperuma WR, Chaudhuri O, Oh KH, Mooney DJ, Vlassak JJ, Suo Z. Highly stretchable and tough hydrogels. Nature. 489: 133-6. PMID 22955625 DOI: 10.1038/nature11409  0.96
2012 Chaudhuri O, Mooney DJ. Stem-cell differentiation: Anchoring cell-fate cues. Nature Materials. 11: 568-9. PMID 22717486 DOI: 10.1038/nmat3366  0.96
2012 Risca VI, Wang EB, Chaudhuri O, Chia JJ, Geissler PL, Fletcher DA. Actin filament curvature biases branching direction. Proceedings of the National Academy of Sciences of the United States of America. 109: 2913-8. PMID 22308368 DOI: 10.1073/pnas.1114292109  0.96
2011 Lam WA, Chaudhuri O, Crow A, Webster KD, Li TD, Kita A, Huang J, Fletcher DA. Mechanics and contraction dynamics of single platelets and implications for clot stiffening. Nature Materials. 10: 61-6. PMID 21131961 DOI: 10.1038/nmat2903  0.96
2010 Chaudhuri O, Fletcher DA. Protrusive forces generated by dendritic actin networks during cell crawling Actin-Based Motility: Cellular, Molecular and Physical Aspects. 359-379. DOI: 10.1007/978-90-481-9301-1_15  0.96
2009 Chaudhuri O, Parekh SH, Lam WA, Fletcher DA. Combined atomic force microscopy and side-view optical imaging for mechanical studies of cells. Nature Methods. 6: 383-7. PMID 19363493 DOI: 10.1038/nmeth.1320  0.96
2007 Choy JL, Parekh SH, Chaudhuri O, Liu AP, Bustamante C, Footer MJ, Theriot JA, Fletcher DA. Differential force microscope for long time-scale biophysical measurements. The Review of Scientific Instruments. 78: 043711. PMID 17477674 DOI: 10.1063/1.2727478  0.96
2007 Chaudhuri O, Parekh SH, Fletcher DA. Reversible stress softening of actin networks. Nature. 445: 295-8. PMID 17230186 DOI: 10.1038/nature05459  0.96
2005 Parekh SH, Chaudhuri O, Theriot JA, Fletcher DA. Loading history determines the velocity of actin-network growth. Nature Cell Biology. 7: 1219-23. PMID 16299496 DOI: 10.1038/ncb1336  0.96
2004 Chaudhuri O, Parekh SH, Liu A, Fletcher DA. Viscoelasticity of growing actin networks Advances in Bioengineering, Bed. 355-356.  0.96
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