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Mary H. Cheng, Ph.D. - Publications

Affiliations: 
Rensselaer Polytechnic Institute, Troy, NY, United States 
Area:
polymer physics, reactor design
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40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Shin DH, Kim M, Kim Y, Jun I, Jung J, Nam JH, Cheng MH, Lee MG. Bicarbonate permeation through anion channels: its role in health and disease. Pflugers Archiv : European Journal of Physiology. PMID 32621085 DOI: 10.1007/S00424-020-02425-X  0.362
2020 Kim Y, Jun I, Shin DH, Yoon JG, Jung J, Park HW, Cheng MH, Bahar I, Whitcomb DC, Lee MG. Dynamic Regulation of Bicarbonate Permeability through CFTR Channel by WNK1 Biophysical Journal. 118. DOI: 10.1016/J.Bpj.2019.11.2348  0.348
2019 Kim Y, Jun I, Shin DH, Yoon JG, Piao H, Jung J, Park HW, Cheng MH, Bahar I, Whitcomb DC, Lee MG. Regulation of CFTR Bicarbonate Channel Activity by WNK1: Implications for Pancreatitis and CFTR-related disorders. Cellular and Molecular Gastroenterology and Hepatology. PMID 31561038 DOI: 10.1016/J.Jcmgh.2019.09.003  0.321
2019 Cheng MH, Bahar I. Monoamine transporters: structure, intrinsic dynamics and allosteric regulation. Nature Structural & Molecular Biology. 26: 545-556. PMID 31270469 DOI: 10.1038/S41594-019-0253-7  0.339
2019 Cheng MH, Ponzoni L, Sorkina T, Lee JY, Zhang S, Sorkin A, Bahar I. Trimerization of dopamine transporter triggered by AIM-100 binding: Molecular mechanism and effect of mutations. Neuropharmacology. 107676. PMID 31228486 DOI: 10.1016/J.Neuropharm.2019.107676  0.348
2018 Ponzoni L, Zhang S, Cheng MH, Bahar I. Shared dynamics of LeuT superfamily members and allosteric differentiation by structural irregularities and multimerization. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 373. PMID 29735731 DOI: 10.1098/Rstb.2017.0177  0.351
2017 Cheng MH, Kaya C, Bahar I. A Quantitative Assessment of the Energetics of Dopamine Translocation by Human Dopamine Transporter. The Journal of Physical Chemistry. B. PMID 29232131 DOI: 10.1021/Acs.Jpcb.7B10340  0.346
2017 Gur M, Cheng MH, Zomot E, Bahar I. Effect of Dimerization on the Dynamics of Neurotransmitter: Sodium Symporters. The Journal of Physical Chemistry. B. PMID 28118712 DOI: 10.1021/Acs.Jpcb.6B09876  0.325
2017 Kaya C, Cheng MH, Block ER, Sorkin A, Faeder JR, Bahar I. Effect of Spatial Complexity on Dopaminergic Signaling Revealed from Multiscale Simulations Biophysical Journal. 112: 135a. DOI: 10.1016/J.Bpj.2016.11.751  0.302
2015 Gur M, Zomot E, Cheng MH, Bahar I. Energy landscape of LeuT from molecular simulations. The Journal of Chemical Physics. 143: 243134. PMID 26723619 DOI: 10.1063/1.4936133  0.364
2015 Jun I, Cheng MH, Sim E, Jung J, Suh BL, Kim Y, Son H, Park K, Kim CH, Yoon JH, Whitcomb DC, Bahar I, Lee MG. Pore dilation increases the bicarbonate permeability of CFTR, ANO1, and glycine receptor anion channels. The Journal of Physiology. PMID 26663196 DOI: 10.1113/Jp271311  0.367
2015 Cheng MH, Bahar I. Molecular Mechanism of Dopamine Transport by Human Dopamine Transporter. Structure (London, England : 1993). 23: 2171-81. PMID 26481814 DOI: 10.1016/J.Str.2015.09.001  0.335
2015 Patel KM, Lin CY, Cheng MH. Effectiveness of Lymphatic Microsurgical Procedures in the Treatment of Primary Lymphedema. Plastic and Reconstructive Surgery. 136: 135-6. PMID 26397662 DOI: 10.1097/01.prs.0000472452.39097.ed  0.369
2015 Cheng MH, Lin CY, Patel K. The Groin vs. Submental Vascularized Lymph Node Flaps: A Head-to-Head Comparison of Surgical Outcomes Following Treatment for Upper Limb Lymphedema. Plastic and Reconstructive Surgery. 136: 135. PMID 26397661 DOI: 10.1097/01.prs.0000472451.39097.36  0.382
2015 Patel KM, Lin CY, Cheng MH. A Prospective Evaluation of Lymphedema-Specific Quality-of-Life Outcomes Following Vascularized Lymph Node Transfer. Annals of Surgical Oncology. 22: 2424-30. PMID 25515196 DOI: 10.1245/s10434-014-4276-3  0.384
2015 Cheng MH, Bahar I. Visualization of Molecular Events from Dopamine-Binding to -Release by Human Dopamine Transporter Biophysical Journal. 108: 462a. DOI: 10.1016/J.Bpj.2014.11.2520  0.351
2014 Cheng MH, Bahar I. Complete mapping of substrate translocation highlights the role of LeuT N-terminal segment in regulating transport cycle. Plos Computational Biology. 10: e1003879. PMID 25299050 DOI: 10.1371/Journal.Pcbi.1003879  0.35
2014 Cheng MH, Bahar I. Complete Mapping of Substrate Translocation Implicates the Secondary Binding Site and Highlights the Significance of LeuT N-Terminal Segment in Regulating Transport Cycle Biophysical Journal. 106: 364a. DOI: 10.1016/J.Bpj.2013.11.2066  0.379
2013 Cheng MH, Bahar I. Coupled global and local changes direct substrate translocation by neurotransmitter-sodium symporter ortholog LeuT. Biophysical Journal. 105: 630-9. PMID 23931311 DOI: 10.1016/J.Bpj.2013.06.032  0.321
2013 Mowrey D, Cheng MH, Liu LT, Willenbring D, Lu X, Wymore T, Xu Y, Tang P. Asymmetric ligand binding facilitates conformational transitions in pentameric ligand-gated ion channels. Journal of the American Chemical Society. 135: 2172-80. PMID 23339564 DOI: 10.1021/Ja307275V  0.395
2013 Tillman T, Cheng MH, Chen Q, Tang P, Xu Y. Reversal of ion-charge selectivity renders the pentameric ligand-gated ion channel GLIC insensitive to anaesthetics. The Biochemical Journal. 449: 61-8. PMID 22978431 DOI: 10.1042/Bj20121072  0.405
2013 Mowrey DD, Cheng MH, Liu LT, Willenbring D, Lu X, Wymore T, Xu Y, Tang P. Does Symmetry of Ligand Occupancy Matter to Conformational Transitions of Pentameric Ligand Gated Ion Channels? Biophysical Journal. 104: 380a. DOI: 10.1016/J.Bpj.2012.11.2116  0.37
2012 Cheng MH, Coalson RD. Energetics and ion permeation characteristics in a glutamate-gated chloride (GluCl) receptor channel. The Journal of Physical Chemistry. B. 116: 13637-43. PMID 23088363 DOI: 10.1021/Jp3074915  0.398
2012 Cheng MH, Coalson RD. Molecular dynamics investigation of Cl- and water transport through a eukaryotic CLC transporter. Biophysical Journal. 102: 1363-71. PMID 22455919 DOI: 10.1016/J.Bpj.2012.01.056  0.348
2011 Coalson RD, Cheng MH. Discrete-state representation of ion permeation coupled to fast gating in a model of CLC-chloride channels: analytic estimation of the state-to-state rate constants. The Journal of Physical Chemistry. A. 115: 9633-42. PMID 21692490 DOI: 10.1021/Jp200749S  0.346
2010 Cheng MH, Coalson RD, Tang P. Molecular dynamics and brownian dynamics investigation of ion permeation and anesthetic halothane effects on a proton-gated ion channel. Journal of the American Chemical Society. 132: 16442-9. PMID 20979415 DOI: 10.1021/Ja105001A  0.4
2010 Chen Q, Cheng MH, Xu Y, Tang P. Anesthetic binding in a pentameric ligand-gated ion channel: GLIC. Biophysical Journal. 99: 1801-9. PMID 20858424 DOI: 10.1016/J.Bpj.2010.07.023  0.383
2010 Coalson RD, Cheng MH. Discrete-state representation of ion permeation coupled to fast gating in a model of ClC chloride channels: comparison to multi-ion continuous space Brownian dynamics simulations. The Journal of Physical Chemistry. B. 114: 1424-33. PMID 20050590 DOI: 10.1021/Jp907965B  0.358
2010 Cheng MH, Xu Y, Coalson RD, Tang∗ P. Molecular Dynamics Investigation of Anesthetic Halothane Interactions with the Proton-Gated Ion Channel GLIC Biophysical Journal. 98: 703a. DOI: 10.1016/J.Bpj.2009.12.3857  0.414
2010 Chen Q, Cheng MH, Stevenson H, Xu Y, Tang P. Multisite Binding of Anesthetics to GLIC, a Pentameric Ligand-Gated Ion Channel Biophysical Journal. 98: 702a-703a. DOI: 10.1016/J.Bpj.2009.12.3855  0.345
2009 Cheng MH, Xu Y, Tang P. Anionic lipid and cholesterol interactions with alpha4beta2 nAChR: insights from MD simulations. The Journal of Physical Chemistry. B. 113: 6964-70. PMID 19419220 DOI: 10.1021/Jp900714B  0.347
2009 Yu AS, Cheng MH, Angelow S, Günzel D, Kanzawa SA, Schneeberger EE, Fromm M, Coalson RD. Molecular basis for cation selectivity in claudin-2-based paracellular pores: identification of an electrostatic interaction site. The Journal of General Physiology. 133: 111-27. PMID 19114638 DOI: 10.1083/Jcb1841Oia3  0.325
2009 Cheng MH, Haddadian E, Xu Y, Tang P. Interactions between POPA and a4b2 nAChR: Insight from MD Simulations Biophysical Journal. 96. DOI: 10.1016/J.Bpj.2008.12.3225  0.379
2008 Haddadian EJ, Cheng MH, Coalson RD, Xu Y, Tang P. In silico models for the human alpha4beta2 nicotinic acetylcholine receptor. The Journal of Physical Chemistry. B. 112: 13981-90. PMID 18847252 DOI: 10.1021/Jp804868S  0.376
2008 Cheng MH, Coalson RD, Cascio M, Kurnikova M. Computational prediction of ion permeation characteristics in the glycine receptor modified by photo-sensitive compounds. Journal of Computer-Aided Molecular Design. 22: 563-70. PMID 18368498 DOI: 10.1007/S10822-008-9200-0  0.335
2008 Cheng MH, Coalson RD, Cascio M. Molecular dynamics simulations of ethanol binding to the transmembrane domain of the glycine receptor: implications for the channel potentiation mechanism. Proteins. 71: 972-81. PMID 18004757 DOI: 10.1002/Prot.21784  0.314
2007 Cheng MH, Mamonov AB, Dukes JW, Coalson RD. Modeling the fast gating mechanism in the ClC-0 chloride channel. The Journal of Physical Chemistry. B. 111: 5956-65. PMID 17487993 DOI: 10.1021/Jp063993H  0.395
2007 Cheng MH, Cascio M, Coalson RD. Homology modeling and molecular dynamics simulations of the alpha1 glycine receptor reveals different states of the channel. Proteins. 68: 581-93. PMID 17469203 DOI: 10.1002/Prot.21435  0.328
2005 Cheng MH, Coalson RD. An accurate and efficient empirical approach for calculating the dielectric self-energy and ion-ion pair potential in continuum models of biological ion channels. The Journal of Physical Chemistry. B. 109: 488-98. PMID 16851040 DOI: 10.1021/Jp047438W  0.335
2005 Cheng MH, Cascio M, Coalson RD. Theoretical studies of the M2 transmembrane segment of the glycine receptor: models of the open pore structure and current-voltage characteristics. Biophysical Journal. 89: 1669-80. PMID 15951389 DOI: 10.1529/Biophysj.105.060368  0.388
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