| Year |
Citation |
Score |
| 2022 |
Leander M, Liu Z, Cui Q, Raman S. Deep mutational scanning and machine learning reveal structural and molecular rules governing allosteric hotspots in homologous proteins. Elife. 11. PMID 36226916 DOI: 10.7554/eLife.79932 |
0.347 |
|
| 2017 |
Raman S. Systems Approaches to Understanding and Designing Allosteric Proteins. Biochemistry. PMID 29235352 DOI: 10.1021/Acs.Biochem.7B01094 |
0.431 |
|
| 2016 |
Taylor ND, Garruss AS, Moretti R, Chan S, Arbing MA, Cascio D, Rogers JK, Isaacs FJ, Kosuri S, Baker D, Fields S, Church GM, Raman S. Engineering an allosteric transcription factor to respond to new ligands. Nature Methods. 13: 177-83. PMID 26689263 DOI: 10.1038/Nmeth.3696 |
0.695 |
|
| 2015 |
Rogers JK, Guzman CD, Taylor ND, Raman S, Anderson K, Church GM. Synthetic biosensors for precise gene control and real-time monitoring of metabolites. Nucleic Acids Research. 43: 7648-60. PMID 26152303 DOI: 10.1093/Nar/Gkv616 |
0.478 |
|
| 2014 |
Raman S, Rogers JK, Taylor ND, Church GM. Evolution-guided optimization of biosynthetic pathways. Proceedings of the National Academy of Sciences of the United States of America. 111: 17803-8. PMID 25453111 DOI: 10.1073/Pnas.1409523111 |
0.463 |
|
| 2014 |
Raman S, Taylor N, Genuth N, Fields S, Church GM. Engineering allostery. Trends in Genetics : Tig. 30: 521-8. PMID 25306102 DOI: 10.1016/j.tig.2014.09.004 |
0.465 |
|
| 2010 |
Tang Y, Schneider WM, Shen Y, Raman S, Inouye M, Baker D, Roth MJ, Montelione GT. Fully automated high-quality NMR structure determination of small (2)H-enriched proteins. Journal of Structural and Functional Genomics. 11: 223-32. PMID 20734145 DOI: 10.1007/S10969-010-9095-6 |
0.555 |
|
| 2010 |
Raman S, Lange OF, Rossi P, Tyka M, Wang X, Aramini J, Liu G, Ramelot TA, Eletsky A, Szyperski T, Kennedy MA, Prestegard J, Montelione GT, Baker D. NMR structure determination for larger proteins using backbone-only data. Science (New York, N.Y.). 327: 1014-8. PMID 20133520 DOI: 10.1126/Science.1183649 |
0.534 |
|
| 2010 |
Raman S, Huang YJ, Mao B, Rossi P, Aramini JM, Liu G, Montelione GT, Baker D. Accurate automated protein NMR structure determination using unassigned NOESY data. Journal of the American Chemical Society. 132: 202-7. PMID 20000319 DOI: 10.1021/Ja905934C |
0.57 |
|
| 2009 |
Krieger E, Joo K, Lee J, Lee J, Raman S, Thompson J, Tyka M, Baker D, Karplus K. Improving physical realism, stereochemistry, and side-chain accuracy in homology modeling: Four approaches that performed well in CASP8. Proteins. 77: 114-22. PMID 19768677 DOI: 10.1002/Prot.22570 |
0.647 |
|
| 2009 |
Rosato A, Bagaria A, Baker D, Bardiaux B, Cavalli A, Doreleijers JF, Giachetti A, Guerry P, Güntert P, Herrmann T, Huang YJ, Jonker HR, Mao B, Malliavin TE, Montelione GT, ... ... Raman S, et al. CASD-NMR: critical assessment of automated structure determination by NMR. Nature Methods. 6: 625-6. PMID 19718014 DOI: 10.1038/Nmeth0909-625 |
0.533 |
|
| 2009 |
Raman S, Vernon R, Thompson J, Tyka M, Sadreyev R, Pei J, Kim D, Kellogg E, DiMaio F, Lange O, Kinch L, Sheffler W, Kim BH, Das R, Grishin NV, et al. Structure prediction for CASP8 with all-atom refinement using Rosetta. Proteins. 77: 89-99. PMID 19701941 DOI: 10.1002/Prot.22540 |
0.725 |
|
| 2009 |
Ramelot TA, Raman S, Kuzin AP, Xiao R, Ma LC, Acton TB, Hunt JF, Montelione GT, Baker D, Kennedy MA. Improving NMR protein structure quality by Rosetta refinement: a molecular replacement study. Proteins. 75: 147-67. PMID 18816799 DOI: 10.1002/Prot.22229 |
0.502 |
|
| 2008 |
Raman S, Qian B, Baker D, Walker RC. Advances in Rosetta protein structure prediction on massively parallel systems Ibm Journal of Research and Development. 52: 7-18. DOI: 10.1147/Rd.521.0007 |
0.601 |
|
| 2007 |
Qian B, Raman S, Das R, Bradley P, McCoy AJ, Read RJ, Baker D. High-resolution structure prediction and the crystallographic phase problem. Nature. 450: 259-64. PMID 17934447 DOI: 10.1038/Nature06249 |
0.763 |
|
| 2007 |
Das R, Qian B, Raman S, Vernon R, Thompson J, Bradley P, Khare S, Tyka MD, Bhat D, Chivian D, Kim DE, Sheffler WH, Malmström L, Wollacott AM, Wang C, et al. Structure prediction for CASP7 targets using extensive all-atom refinement with Rosetta@home. Proteins. 69: 118-28. PMID 17894356 DOI: 10.1002/Prot.21636 |
0.56 |
|
| 2006 |
Walker RC, Raman S, Baker D. High resolution, high throughput protein structure prediction using IBM Blue Gene supercomputers: Predicting CASP targets in record time Proceedings of the 2006 Acm/Ieee Conference On Supercomputing, Sc'06. DOI: 10.1145/1188455.1188626 |
0.519 |
|
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