Zhou Zhu, Ph.D. - Publications

Affiliations: 
2005 Harvard University, Cambridge, MA, United States 
Area:
Computational Genetics

27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Cao J, Zhu Z, Wang H, Nichols TC, Lui GYL, Deng S, Rejto PA, VanArsdale T, Hardwick JS, Weinrich SL, Wei P. Combining CDK4/6 inhibition with taxanes enhances anti-tumor efficacy by sustained impairment of pRB-E2F pathways in squamous cell lung cancer. Oncogene. PMID 30700828 DOI: 10.1038/S41388-019-0708-7  0.317
2018 Finn R, Liu Y, Martin M, Rugo H, Dieras V, Im S, Gelmon K, Harbeck N, Zhu Z, Lu D, Gauthier E, Bartlett C, Slamon D. Abstract P2-09-10: Comprehensive gene expression biomarker analysis of CDK 4/6 and endocrine pathways from the PALOMA-2 study Cancer Research. 78. DOI: 10.1158/1538-7445.Sabcs17-P2-09-10  0.316
2017 Bar-Peled L, Kemper EK, Suciu RM, Vinogradova EV, Backus KM, Horning BD, Paul TA, Ichu TA, Svensson RU, Olucha J, Chang MW, Kok BP, Zhu Z, Ihle NT, Dix MM, et al. Chemical Proteomics Identifies Druggable Vulnerabilities in a Genetically Defined Cancer. Cell. PMID 28965760 DOI: 10.1016/J.Cell.2017.08.051  0.306
2017 Lira ME, Xie T, Deng S, Kinong J, Gao J, Zhu Z, Lee N, Rejto P, Bienkowska J, Hardwick J, Wang K, Huang S. Abstract 2749: Liquid biopsy testing allows highly-sensitive detection of plasma cfDNA mutations in 87 breast cancer-related genes Cancer Research. 77: 2749-2749. DOI: 10.1158/1538-7445.Am2017-2749  0.302
2017 Cao J, Zhu Z, Wang H, Nichols T, Rosfjord E, Hopf C, Upeslacis E, Rejto P, Weinrich S, Vanarsdale T, Hardwick J, Wei P. Abstract 2355: Palbociclib enhances the antitumor activity of taxanes by abrogating cell cycle checkpoints and alleviating hypoxia in squamous cell lung cancer Cancer Research. 77: 2355-2355. DOI: 10.1158/1538-7445.Am2017-2355  0.326
2016 Zhu Z, Ihle NT, Rejto PA, Zarrinkar PP. Outlier analysis of functional genomic profiles enriches for oncology targets and enables precision medicine. Bmc Genomics. 17: 455. PMID 27296290 DOI: 10.1186/S12864-016-2807-Y  0.318
2016 Lee N, Eisele K, Chionis J, Yuan J, Zhu Z, Liu C, Li D, Olson P, Fantin V, Arndt K, Shields D, VanArsdale T. Abstract P3-06-01: Mechanisms of resistance to CDK4/6 inhibition in ER+ breast cancer Cancer Research. 76. DOI: 10.1158/1538-7445.Sabcs15-P3-06-01  0.303
2015 Ablikim M, Achasov MN, Ai XC, Albayrak O, Albrecht M, Ambrose DJ, Amoroso A, An FF, An Q, Bai JZ, Ferroli RB, Ban Y, Bennett DW, Bennett JV, Bertani M, ... Zhu ZA, et al. Observation of a Neutral Structure near the DD[over ¯]^{*} Mass Threshold in e^{+}e^{-}→(DD[over ¯]^{*})^{0}π^{0} at sqrt[s]=4.226 and 4.257 GeV. Physical Review Letters. 115: 222002. PMID 26650295 DOI: 10.1103/Physrevlett.115.222002  0.42
2015 Ablikim M, Achasov MN, Ai XC, Albayrak O, Albrecht M, Ambrose DJ, Amoroso A, An FF, An Q, Bai JZ, Baldini Ferroli R, Ban Y, Bennett DW, Bennett JV, Bertani M, ... Zhu ZA, et al. Measurement of the Absolute Branching Fraction for Λ_{c}^{+}→Λe^{+}ν_{e}. Physical Review Letters. 115: 221805. PMID 26650293 DOI: 10.1103/Physrevlett.115.221805  0.421
2015 Zhu Z, Liang Z, Liany H, Yang C, Wen L, Lin Z, Sheng Y, Lin Y, Ye L, Cheng Y, Chang Y, Liu L, Yang L, Shi Y, Shen C, et al. Discovery of a novel genetic susceptibility locus on X chromosome for systemic lupus erythematosus. Arthritis Research & Therapy. 17: 349. PMID 26635088 DOI: 10.1186/S13075-015-0857-1  0.361
2015 Yang L, Wang J, Li J, Zhang H, Guo S, Yan M, Zhu Z, Lan B, Ding Y, Xu M, Li W, Gu X, Qi C, Zhu H, Shao Z, et al. Identification of serum biomarkers for gastric cancer diagnosis using a human proteome microarray. Molecular & Cellular Proteomics : McP. PMID 26598640 DOI: 10.1074/Mcp.M115.051250  0.373
2015 Ablikim M, Achasov MN, Ai XC, Albayrak O, Albrecht M, Ambrose DJ, Amoroso A, An FF, An Q, Bai JZ, Ferroli RB, Ban Y, Bennett DW, Bennett JV, Bertani M, ... Zhu ZA, et al. Observation of a Neutral Charmoniumlike State Z_{c}(4025)^{0} in e^{+}e^{-}→(D^{*}D[over ¯]^{*})^{0}π^{0}. Physical Review Letters. 115: 182002. PMID 26565461 DOI: 10.1103/Physrevlett.115.182002  0.419
2015 Li K, Li L, Gao M, Zhu Z, Chen P, Yang L, Zhao G. Application of ultrasound-guided subcostal transversus abdominis plane block in gastric cancer patients undergoing open gastrectomy. International Journal of Clinical and Experimental Medicine. 8: 13976-82. PMID 26550355  0.347
2015 Wang HH, Shi WJ, Hou L, Li GP, Zhu Z, Wang YY. A Cationic MOF with High Uptake and Selectivity for CO2 due to Multiple CO2 -Philic Sites. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 26417961 DOI: 10.1002/chem.201502532  0.395
2015 Martinez R, Blasina A, Hallin JF, Hu W, Rymer I, Fan J, Hoffman RL, Murphy S, Marx M, Yanochko G, Trajkovic D, Dinh D, Timofeevski S, Zhu Z, Sun P, et al. Mitotic Checkpoint Kinase Mps1 Has a Role in Normal Physiology which Impacts Clinical Utility. Plos One. 10: e0138616. PMID 26398286 DOI: 10.1371/Journal.Pone.0138616  0.301
2015 Zheng X, Ozeck M, Zhu Z, Ching K, Shields D, Hardwick J, Rejto P, VanArsdale T. Abstract 940: Identification of Palbociclib response signature across indications Cancer Research. 75: 940-940. DOI: 10.1158/1538-7445.Am2015-940  0.35
2014 Kung PP, Martinez R, Zhu Z, Zager M, Blasina A, Rymer I, Hallin J, Xu M, Carroll C, Chionis J, Wells P, Kozminski K, Fan J, Guicherit O, Huang B, et al. Chemogenetic evaluation of the mitotic kinesin CENP-E reveals a critical role in triple-negative breast cancer. Molecular Cancer Therapeutics. 13: 2104-15. PMID 24928852 DOI: 10.1158/1535-7163.Mct-14-0083-T  0.312
2013 Wang K, Lim HY, Shi S, Lee J, Deng S, Xie T, Zhu Z, Wang Y, Pocalyko D, Yang WJ, Rejto PA, Mao M, Park C, Xu J. Abstract 2002: Genomic landscape of copy number aberrations enables the identification of oncogenic drivers in hepatocellular carcinoma. Cancer Research. 73: 2002-2002. DOI: 10.1158/1538-7445.Am2013-2002  0.31
2012 Zhu Z, Shi M, Hu W, Estrella H, Engebretsen J, Nichols T, Briere D, Hosea N, Los G, Rejto PA, Fanjul A. Dose-dependent effects of small-molecule antagonists on the genomic landscape of androgen receptor binding. Bmc Genomics. 13: 355. PMID 22849360 DOI: 10.1186/1471-2164-13-355  0.323
2011 Jackson-Fisher AJ, McMahon MJ, Lam J, Li C, Engstrom LD, Tsaparikos K, Shields DJ, Fang DD, Lira ME, Zhu Z, Robbins MD, Schwab R, Munchhof MJ, VanArsdale T. Abstract 4504: PF-04449913, a small molecule inhibitor of Hedgehog signaling, is effective in inhibiting tumor growth in preclinical models Cancer Research. 71: 4504-4504. DOI: 10.1158/1538-7445.Am2011-4504  0.309
2011 Rymer IC, Wang J, Zhu Z, Schwab R, Wallace AM, Blair SL, Greenberg N, Yang WJ. Abstract 1604: Development of breast cancer patient-derived xenograft models as preclinical tool for drug discovery Cancer Research. 71: 1604-1604. DOI: 10.1158/1538-7445.Am2011-1604  0.319
2007 Birney E, Stamatoyannopoulos JA, Dutta A, Guigó R, Gingeras TR, Margulies EH, Weng Z, Snyder M, Dermitzakis ET, Thurman RE, Kuehn MS, Taylor CM, Neph S, Koch CM, ... ... Zhu Z, et al. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature. 447: 799-816. PMID 17571346 DOI: 10.1038/Nature05874  0.331
2006 Yang A, Zhu Z, Kapranov P, McKeon F, Church GM, Gingeras TR, Struhl K. Relationships between p63 binding, DNA sequence, transcription activity, and biological function in human cells. Molecular Cell. 24: 593-602. PMID 17188034 DOI: 10.1016/J.Molcel.2006.10.018  0.466
2005 Zhu Z, Shendure J, Church GM. Discovering functional transcription-factor combinations in the human cell cycle. Genome Research. 15: 848-55. PMID 15930495 DOI: 10.1101/Gr.3394405  0.575
2005 Tompa M, Li N, Bailey TL, Church GM, De Moor B, Eskin E, Favorov AV, Frith MC, Fu Y, Kent WJ, Makeev VJ, Mironov AA, Noble WS, Pavesi G, Pesole G, ... ... Zhu Z, et al. Assessing computational tools for the discovery of transcription factor binding sites. Nature Biotechnology. 23: 137-44. PMID 15637633 DOI: 10.1038/Nbt1053  0.415
2004 Feingold EA, Good PJ, Guyer MS, Kamholz S, Liefer L, Wetterstrand K, Collins FS, Gingeras TR, Kampa D, Sekinger EA, Cheng J, Hirsch H, Ghosh S, Zhu Z, Patel S, et al. The ENCODE (ENCyclopedia of DNA Elements) Project Science. 306: 636-640. PMID 15499007 DOI: 10.1126/Science.1105136  0.6
2002 Zhu Z, Pilpel Y, Church GM. Computational identification of transcription factor binding sites via a transcription-factor-centric clustering (TFCC) algorithm. Journal of Molecular Biology. 318: 71-81. PMID 12054769 DOI: 10.1016/S0022-2836(02)00026-8  0.445
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