Matthew P. Conomos, Ph.D. - Publications

Affiliations: 
2014 Biostatistics Public Health University of Washington, Seattle, Seattle, WA 

45 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Jakubek YA, Zhou Y, Stilp A, Bacon J, Wong JW, Ozcan Z, Arnett D, Barnes K, Bis JC, Boerwinkle E, Brody JA, Carson AP, Chasman DI, Chen J, Cho M, ... Conomos MP, et al. Mosaic chromosomal alterations in blood across ancestries using whole-genome sequencing. Nature Genetics. PMID 37904051 DOI: 10.1038/s41588-023-01553-1  0.382
2023 Zhang X, Brody JA, Graff M, Highland HM, Chami N, Xu H, Wang Z, Ferrier K, Chittoor G, Josyula NS, Li X, Li Z, Allison MA, Becker DM, Bielak LF, ... ... Conomos MP, et al. WHOLE GENOME SEQUENCING ANALYSIS OF BODY MASS INDEX IDENTIFIES NOVEL AFRICAN ANCESTRY-SPECIFIC RISK ALLELE. Medrxiv : the Preprint Server For Health Sciences. PMID 37662265 DOI: 10.1101/2023.08.21.23293271  0.387
2023 Seyerle AA, Laurie CA, Coombes BJ, Jain D, Conomos MP, Brody J, Chen MH, Gogarten SM, Beutel KM, Gupta N, Heckbert SR, Jackson RD, Johnson AD, Ko D, Manson JE, et al. Whole Genome Analysis of Venous Thromboembolism: the Trans-Omics for Precision Medicine Program. Circulation. Genomic and Precision Medicine. e003532. PMID 36960714 DOI: 10.1161/CIRCGEN.121.003532  0.325
2022 Wheeler MM, Stilp AM, Rao S, Halldórsson BV, Beyter D, Wen J, Mihkaylova AV, McHugh CP, Lane J, Jiang MZ, Raffield LM, Jun G, Sedlazeck FJ, Metcalf G, Yao Y, ... ... Conomos MP, et al. Whole genome sequencing identifies structural variants contributing to hematologic traits in the NHLBI TOPMed program. Nature Communications. 13: 7592. PMID 36481753 DOI: 10.1038/s41467-022-35354-7  0.446
2022 Li Z, Li X, Zhou H, Gaynor SM, Selvaraj MS, Arapoglou T, Quick C, Liu Y, Chen H, Sun R, Dey R, Arnett DK, Auer PL, Bielak LF, Bis JC, ... ... Conomos MP, et al. A framework for detecting noncoding rare-variant associations of large-scale whole-genome sequencing studies. Nature Methods. PMID 36303018 DOI: 10.1038/s41592-022-01640-x  0.399
2022 Khan AT, Gogarten SM, McHugh CP, Stilp AM, Sofer T, Bowers ML, Wong Q, Cupples LA, Hidalgo B, Johnson AD, McDonald MN, McGarvey ST, Taylor MRG, Fullerton SM, Conomos MP, et al. Recommendations on the use and reporting of race, ethnicity, and ancestry in genetic research: Experiences from the NHLBI TOPMed program. Cell Genomics. 2. PMID 36119389 DOI: 10.1016/j.xgen.2022.100155  0.312
2022 Taub MA, Conomos MP, Keener R, Iyer KR, Weinstock JS, Yanek LR, Lane J, Miller-Fleming TW, Brody JA, Raffield LM, McHugh CP, Jain D, Gogarten SM, Laurie CA, Keramati A, et al. Genetic determinants of telomere length from 109,122 ancestrally diverse whole-genome sequences in TOPMed. Cell Genomics. 2. PMID 35530816 DOI: 10.1016/j.xgen.2021.100084  0.46
2022 Huang L, Rosen JD, Sun Q, Chen J, Wheeler MM, Zhou Y, Min YI, Kooperberg C, Conomos MP, Stilp AM, Rich SS, Rotter JI, Manichaikul A, Loos RJF, Kenny EE, et al. TOP-LD: A tool to explore linkage disequilibrium with TOPMed whole-genome sequence data. American Journal of Human Genetics. PMID 35504290 DOI: 10.1016/j.ajhg.2022.04.006  0.438
2021 Mikhaylova AV, McHugh CP, Polfus LM, Raffield LM, Boorgula MP, Blackwell TW, Brody JA, Broome J, Chami N, Chen MH, Conomos MP, Cox C, Curran JE, Daya M, Ekunwe L, et al. Whole-genome sequencing in diverse subjects identifies genetic correlates of leukocyte traits: The NHLBI TOPMed program. American Journal of Human Genetics. PMID 34582791 DOI: 10.1016/j.ajhg.2021.08.007  0.429
2021 Little A, Hu Y, Sun Q, Jain D, Broome J, Chen MH, Thibord F, McHugh C, Surendran P, Blackwell TW, Brody JA, Bhan A, Chami N, Vries PS, Ekunwe L, ... ... Conomos MP, et al. Whole genome sequence analysis of platelet traits in the NHLBI trans-omics for precision medicine initiative. Human Molecular Genetics. PMID 34553764 DOI: 10.1093/hmg/ddab252  0.364
2021 Sofer T, Lee J, Kurniansyah N, Jain D, Laurie CA, Gogarten SM, Conomos MP, Heavner B, Hu Y, Kooperberg C, Haessler J, Vasan RS, Cupples LA, Coombes BJ, Seyerle A, et al. BinomiRare: A robust test for association of a rare genetic variant with a binary outcome for mixed models and any case-control proportion. Hgg Advances. 2. PMID 34337551 DOI: 10.1016/j.xhgg.2021.100040  0.369
2021 Lin E, Tsai SJ, Kuo PH, Liu YL, Yang AC, Conomos MP, Thornton TA. Genome-wide association study in the Taiwan biobank identifies four novel genes for human height: NABP2, RASA2, RNF41 and SLC39A5. Human Molecular Genetics. PMID 34270706 DOI: 10.1093/hmg/ddab202  0.422
2021 Sofer T, Zheng X, Laurie CA, Gogarten SM, Brody JA, Conomos MP, Bis JC, Thornton TA, Szpiro A, O'Connell JR, Lange EM, Gao Y, Cupples LA, Psaty BM, et al. Variant-specific inflation factors for assessing population stratification at the phenotypic variance level. Nature Communications. 12: 3506. PMID 34108454 DOI: 10.1038/s41467-021-23655-2  0.583
2021 Hu Y, Stilp AM, McHugh CP, Rao S, Jain D, Zheng X, Lane J, Méric de Bellefon S, Raffield LM, Chen MH, Yanek LR, Wheeler M, Yao Y, Ren C, Broome J, ... ... Conomos MP, et al. Whole-genome sequencing association analysis of quantitative red blood cell phenotypes: The NHLBI TOPMed program. American Journal of Human Genetics. 108: 1165. PMID 34087167 DOI: 10.1016/j.ajhg.2021.04.015  0.502
2021 Hu Y, Stilp AM, McHugh CP, Rao S, Jai D, Zheng X, Lane J, Méric de Bellefon S, Raffield LM, Chen MH, Yanek LR, Wheeler M, Yao Y, Ren C, Broome J, ... ... Conomos MP, et al. Whole-genome sequencing association analysis of quantitative red blood cell phenotypes: The NHLBI TOPMed program. American Journal of Human Genetics. PMID 33887194 DOI: 10.1016/j.ajhg.2021.04.003  0.591
2021 Taliun D, Harris DN, Kessler MD, Carlson J, Szpiech ZA, Torres R, Taliun SAG, Corvelo A, Gogarten SM, Kang HM, Pitsillides AN, LeFaive J, Lee SB, Tian X, Browning BL, ... ... Conomos MP, et al. Sequencing of 53,831 diverse genomes from the NHLBI TOPMed Program. Nature. 590: 290-299. PMID 33568819 DOI: 10.1038/s41586-021-03205-y  0.624
2020 Li X, Li Z, Zhou H, Gaynor SM, Liu Y, Chen H, Sun R, Dey R, Arnett DK, Aslibekyan S, Ballantyne CM, Bielak LF, Blangero J, Boerwinkle E, Bowden DW, ... ... Conomos MP, et al. Dynamic incorporation of multiple in silico functional annotations empowers rare variant association analysis of large whole-genome sequencing studies at scale. Nature Genetics. PMID 32839606 DOI: 10.1038/S41588-020-0676-4  0.492
2019 Gogarten SM, Sofer T, Chen H, Yu C, Brody JA, Thornton TA, Rice KM, Conomos MP. Genetic association testing using the GENESIS R/Bioconductor package. Bioinformatics (Oxford, England). PMID 31329242 DOI: 10.1093/Bioinformatics/Btz567  0.491
2019 Wojcik GL, Graff M, Nishimura KK, Tao R, Haessler J, Gignoux CR, Highland HM, Patel YM, Sorokin EP, Avery CL, Belbin GM, Bien SA, Cheng I, Cullina S, Hodonsky CJ, ... ... Conomos MP, et al. Genetic analyses of diverse populations improves discovery for complex traits. Nature. PMID 31217584 DOI: 10.1038/S41586-019-1310-4  0.476
2019 Zubair N, Conomos MP, Hood L, Omenn GS, Price ND, Spring BJ, Magis AT, Lovejoy JC. Genetic Predisposition Impacts Clinical Changes in a Lifestyle Coaching Program. Scientific Reports. 9: 6805. PMID 31048771 DOI: 10.1038/S41598-019-43058-0  0.376
2019 Cade BE, Chen H, Stilp AM, Louie T, Ancoli-Israel S, Arens R, Barfield R, Below JE, Cai J, Conomos MP, Evans DS, Frazier-Wood AC, Gharib SA, Gleason KJ, Gottlieb DJ, et al. Associations of variants In the hexokinase 1 and interleukin 18 receptor regions with oxyhemoglobin saturation during sleep. Plos Genetics. 15: e1007739. PMID 30990817 DOI: 10.1371/Journal.Pgen.1007739  0.44
2018 Wang H, Cade BE, Sofer T, Sands SA, Chen H, Browning S, Stilp AM, Louie TL, Thornton TA, Craig Johnson W, Below JE, Conomos MP, Evans DS, Gharib SA, Guo X, et al. Admixture mapping identifies novel loci for obstructive sleep apnea in hispanic/latino americans. Human Molecular Genetics. PMID 30403821 DOI: 10.1093/Hmg/Ddy387  0.445
2017 Méndez-Giráldez R, Gogarten SM, Below JE, Yao J, Seyerle AA, Highland HM, Kooperberg C, Soliman EZ, Rotter JI, Kerr KF, Ryckman KK, Taylor KD, Petty LE, Shah SJ, Conomos MP, et al. GWAS of the electrocardiographic QT interval in Hispanics/Latinos generalizes previously identified loci and identifies population-specific signals. Scientific Reports. 7: 17075. PMID 29213071 DOI: 10.1038/S41598-017-17136-0  0.47
2017 Chen H, Cade BE, Gleason KJ, Bjonnes AC, Stilp AM, Sofer T, Conomos MP, Ancoli-Israel S, Arens R, Azarbarzin A, Bell GI, Below JE, Chun S, Evans DS, Ewert R, et al. Multi-ethnic Meta-analysis Identifies RAI1 as a Possible Obstructive Sleep Apnea Related Quantitative Trait Locus in Men. American Journal of Respiratory Cell and Molecular Biology. PMID 29077507 DOI: 10.1165/Rcmb.2017-0237Oc  0.416
2017 Brody JA, Morrison AC, Bis JC, O'Connell JR, Brown MR, Huffman JE, Ames DC, Carroll A, Conomos MP, Gabriel S, Gibbs RA, Gogarten SM, Gupta N, Jaquish CE, Johnson AD, et al. Analysis commons, a team approach to discovery in a big-data environment for genetic epidemiology. Nature Genetics. 49: 1560-1563. PMID 29074945 DOI: 10.1038/Ng.3968  0.406
2017 Kerr KF, Avery CL, Lin HJ, Raffield LM, Zhang QS, Browning BL, Browning SR, Conomos MP, Gogarten SM, Laurie CC, Sofer T, Thornton TA, Hohensee C, Jackson RD, Kooperberg C, et al. Genome-wide Association Study of Heart Rate and Its Variability in Hispanic/Latino Cohorts. Heart Rhythm. PMID 28610988 DOI: 10.1016/J.Hrthm.2017.06.018  0.371
2017 Yan Q, Brehm J, Pino-Yanes M, Forno E, Lin J, Oh SS, Acosta-Perez E, Laurie CC, Cloutier MM, Raby BA, Stilp AM, Sofer T, Hu D, Huntsman S, Eng CS, ... Conomos MP, et al. A meta-analysis of genome-wide association studies of asthma in Puerto Ricans. The European Respiratory Journal. 49. PMID 28461288 DOI: 10.1183/13993003.01505-2016  0.403
2017 Raffield LM, Louie T, Sofer T, Jain D, Ipp E, Taylor KD, Papanicolaou GJ, Avilés-Santa L, Lange LA, Laurie CC, Conomos MP, Thornton TA, Ida Chen YD, Qi Q, Cotler S, et al. Genome-wide association study of iron traits and relation to diabetes in the Hispanic Community Health Study/Study of Latinos (HCHS/SOL): Potential genomic intersection of iron and glucose regulation? Human Molecular Genetics. PMID 28334935 DOI: 10.1093/Hmg/Ddx082  0.334
2017 Zheng X, Gogarten SM, Lawrence M, Stilp A, Conomos MP, Weir BS, Laurie C, Levine D. SeqArray - A storage-efficient high-performance data format for WGS variant calls. Bioinformatics (Oxford, England). PMID 28334390 DOI: 10.1093/Bioinformatics/Btx145  0.625
2016 Blue EM, Brown LA, Conomos MP, Kirk JL, Nato AQ, Popejoy AB, Raffa J, Ranola J, Wijsman EM, Thornton T. Estimating relationships between phenotypes and subjects drawn from admixed families. Bmc Proceedings. 10: 357-362. PMID 27980662 DOI: 10.1186/S12919-016-0056-3  0.349
2016 Kramer HJ, Stilp AM, Laurie CC, Reiner AP, Lash J, Daviglus ML, Rosas SE, Ricardo AC, Tayo BO, Flessner MF, Kerr KF, Peralta C, Durazo-Arvizu R, Conomos M, Thornton T, et al. African Ancestry-Specific Alleles and Kidney Disease Risk in Hispanics/Latinos. Journal of the American Society of Nephrology : Jasn. PMID 27650483 DOI: 10.1681/Asn.2016030357  0.311
2016 Chen H, Wang C, Conomos MP, Stilp AM, Li Z, Sofer T, Szpiro AA, Chen W, Brehm JM, Celedón JC, Redline S, Papanicolaou GJ, Thornton TA, Laurie CC, Rice K, et al. Control for Population Structure and Relatedness for Binary Traits in Genetic Association Studies via Logistic Mixed Models. American Journal of Human Genetics. PMID 27018471 DOI: 10.1016/J.Ajhg.2016.02.012  0.492
2016 Cade BE, Chen H, Stilp AM, Gleason KJ, Sofer T, Ancoli-Israel S, Arens R, Bell GI, Below JE, Bjonnes AC, Chun S, Conomos MP, Evans DS, Johnson WC, Frazier-Wood AC, et al. Genetic Associations with Obstructive Sleep Apnea Traits in Hispanic/Latino Americans. American Journal of Respiratory and Critical Care Medicine. PMID 26977737 DOI: 10.1164/Rccm.201512-2431Oc  0.367
2016 Schick UM, Jain D, Hodonsky CJ, Morrison JV, Davis JP, Brown L, Sofer T, Conomos MP, Schurmann C, McHugh CP, Nelson SC, Vadlamudi S, Stilp A, Plantinga A, Baier L, et al. Genome-wide Association Study of Platelet Count Identifies Ancestry-Specific Loci in Hispanic/Latino Americans. American Journal of Human Genetics. PMID 26805783 DOI: 10.1016/J.Ajhg.2015.12.003  0.595
2016 Conomos MP, Laurie CA, Stilp AM, Gogarten SM, McHugh CP, Nelson SC, Sofer T, Fernández-Rhodes L, Justice AE, Graff M, Young KL, Seyerle AA, Avery CL, Taylor KD, Rotter JI, et al. Genetic Diversity and Association Studies in US Hispanic/Latino Populations: Applications in the Hispanic Community Health Study/Study of Latinos. American Journal of Human Genetics. 98: 165-184. PMID 26748518 DOI: 10.1016/J.Ajhg.2015.12.001  0.596
2016 Conomos MP, Reiner AP, Weir BS, Thornton TA. Model-free Estimation of Recent Genetic Relatedness. American Journal of Human Genetics. 98: 127-148. PMID 26748516 DOI: 10.1016/J.Ajhg.2015.11.022  0.607
2015 Morrison J, Laurie CC, Marazita ML, Sanders AE, Offenbacher S, Salazar CR, Conomos MP, Thornton T, Jain D, Laurie CA, Kerr K, Papanicolaou G, Taylor K, Kaste LM, Beck JD, et al. Genome-wide association study of dental caries in the Hispanic Communities Health Study/Study of Latinos (HCHS/SOL). Human Molecular Genetics. PMID 26662797 DOI: 10.1093/Hmg/Ddv506  0.432
2015 Conomos MP, Miller MB, Thornton TA. Robust inference of population structure for ancestry prediction and correction of stratification in the presence of relatedness. Genetic Epidemiology. 39: 276-93. PMID 25810074 DOI: 10.1002/Gepi.21896  0.454
2014 Blue EM, Cheung CY, Glazner CG, Conomos MP, Lewis SM, Sverdlov S, Thornton T, Wijsman EM. Identity-by-descent graphs offer a flexible framework for imputation and both linkage and association analyses. Bmc Proceedings. 8: S19. PMID 25519371 DOI: 10.1186/1753-6561-8-S1-S19  0.379
2014 Thornton T, Conomos MP, Sverdlov S, Blue EM, Cheung CY, Glazner CG, Lewis SM, Wijsman EM. Estimating and adjusting for ancestry admixture in statistical methods for relatedness inference, heritability estimation, and association testing. Bmc Proceedings. 8: S5. PMID 25519330 DOI: 10.1186/1753-6561-8-S1-S5  0.42
2012 Gogarten SM, Bhangale T, Conomos MP, Laurie CA, McHugh CP, Painter I, Zheng X, Crosslin DR, Levine D, Lumley T, Nelson SC, Rice K, Shen J, Swarnkar R, Weir BS, et al. GWASTools: an R/Bioconductor package for quality control and analysis of genome-wide association studies. Bioinformatics (Oxford, England). 28: 3329-31. PMID 23052040 DOI: 10.1093/Bioinformatics/Bts610  0.63
2012 Laurie CC, Laurie CA, Rice K, Doheny KF, Zelnick LR, McHugh CP, Ling H, Hetrick KN, Pugh EW, Amos C, Wei Q, Wang LE, Lee JE, Barnes KC, Hansel NN, ... ... Conomos MP, et al. Detectable clonal mosaicism from birth to old age and its relationship to cancer. Nature Genetics. 44: 642-50. PMID 22561516 DOI: 10.1038/Ng.2271  0.584
2012 Conomos M, Weir B. Whole-genome searching for non-additive genetic variance F1000research. 3. DOI: 10.7490/F1000Research.1092252.1  0.598
2011 FitzGerald LM, Kwon EM, Conomos MP, Kolb S, Holt SK, Levine D, Feng Z, Ostrander EA, Stanford JL. Genome-wide association study identifies a genetic variant associated with risk for more aggressive prostate cancer. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. 20: 1196-203. PMID 21467234 DOI: 10.1158/1055-9965.Epi-10-1299  0.351
2006 Heath LM, Earls JC, Magis AT, Conomos MP, Rohwer JE, Hood L, Lovejoy JC, Price ND. P2-123: A PHENOME-WIDE ASSOCIATION STUDY (PHEWAS) OF BLOOD-BASED BIOLOGICAL MARKERS AND APOLIPOPROTEIN E GENOTYPE ACROSS THE ADULT LIFESPAN Alzheimer's & Dementia. 14: P716-P716. DOI: 10.1016/J.Jalz.2018.06.809  0.32
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