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Josep Comeron - Publications

Affiliations: 
University of Iowa, Iowa City, IA 
Area:
molecular evolution, population genetics
Website:
http://www.biology.uiowa.edu/comeron/
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32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Pettie N, Llopart A, Comeron JM. Meiotic, genomic and evolutionary properties of crossover distribution in Drosophila yakuba. Plos Genetics. 18: e1010087. PMID 35320272 DOI: 10.1371/journal.pgen.1010087  0.364
2017 Comeron JM. Background selection as null hypothesis in population genomics: insights and challenges from Drosophila studies. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 372. PMID 29109230 DOI: 10.1098/rstb.2016.0471  0.533
2016 Comeron JM, Reed J, Christie M, Jacobs JS, Dierdorff J, Eberl DF, Manak JR. A Mismatch EndoNuclease Array-Based Methodology (MENA) for Identifying Known SNPs or Novel Point Mutations. Microarrays (Basel, Switzerland). 5. PMID 27600073 DOI: 10.3390/microarrays5020007  0.351
2016 Adrian AB, Cruz Corchado J, Comeron JM. Predictive models of recombination rate variation across the Drosophila melanogaster genome. Genome Biology and Evolution. PMID 27492232 DOI: 10.1093/gbe/evw181  0.36
2014 Comeron JM. Background selection as baseline for nucleotide variation across the Drosophila genome. Plos Genetics. 10: e1004434. PMID 24968283 DOI: 10.1371/journal.pgen.1004434  0.564
2013 Adrian AB, Comeron JM. The Drosophila early ovarian transcriptome provides insight to the molecular causes of recombination rate variation across genomes. Bmc Genomics. 14: 794. PMID 24228734 DOI: 10.1186/1471-2164-14-794  0.383
2012 Comeron JM, Ratnappan R, Bailin S. The many landscapes of recombination in Drosophila melanogaster. Plos Genetics. 8: e1002905. PMID 23071443 DOI: 10.1371/Journal.Pgen.1002905  0.749
2012 McDonnell CM, King D, Comeron JM, Li H, Sun W, Berenbaum MR, Schuler MA, Pittendrigh BR. Evolutionary toxicogenomics: diversification of the Cyp12d1 and Cyp12d3 genes in Drosophila species. Journal of Molecular Evolution. 74: 281-96. PMID 22811321 DOI: 10.1007/S00239-012-9506-3  0.397
2010 Williford A, Comeron JM. Local effects of limited recombination: historical perspective and consequences for population estimates of adaptive evolution. The Journal of Heredity. 101: S127-34. PMID 20421321 DOI: 10.1093/Jhered/Esq012  0.756
2008 Hadany L, Comeron JM. Why are sex and recombination so common? Annals of the New York Academy of Sciences. 1133: 26-43. PMID 18559814 DOI: 10.1196/annals.1438.011  0.346
2008 Llopart A, Comeron JM. Recurrent events of positive selection in independent Drosophila lineages at the spermatogenesis gene roughex. Genetics. 179: 1009-20. PMID 18505872 DOI: 10.1534/Genetics.107.086231  0.417
2008 Lanier W, Moustafa A, Bhattacharya D, Comeron JM. EST analysis of Ostreococcus lucimarinus, the most compact eukaryotic genome, shows an excess of introns in highly expressed genes. Plos One. 3: e2171. PMID 18478122 DOI: 10.1371/Journal.Pone.0002171  0.65
2008 Llopart A, Mabillé A, Peters-Hall JR, Comeron JM, Kliman RM. A new test for selection applied to codon usage in Drosophila simulans and D. mauritiana. Journal of Molecular Evolution. 66: 224-31. PMID 18288436 DOI: 10.1007/S00239-008-9072-X  0.34
2008 Comeron JM, Williford A, Kliman RM. The Hill-Robertson effect: evolutionary consequences of weak selection and linkage in finite populations. Heredity. 100: 19-31. PMID 17878920 DOI: 10.1038/Sj.Hdy.6801059  0.753
2007 Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, ... ... Comeron JM, et al. Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450: 203-18. PMID 17994087 DOI: 10.1038/Nature06341  0.726
2006 Yoon HS, Ciniglia C, Wu M, Comeron JM, Pinto G, Pollio A, Bhattacharya D. Establishment of endolithic populations of extremophilic Cyanidiales (Rhodophyta). Bmc Evolutionary Biology. 6: 78. PMID 17022817 DOI: 10.1186/1471-2148-6-78  0.32
2006 Kalari KR, Casavant M, Bair TB, Keen HL, Comeron JM, Casavant TL, Scheetz TE. First exons and introns--a survey of GC content and gene structure in the human genome. In Silico Biology. 6: 237-42. PMID 16922687  0.356
2006 Comeron JM. Weak selection and recent mutational changes influence polymorphic synonymous mutations in humans. Proceedings of the National Academy of Sciences of the United States of America. 103: 6940-5. PMID 16632609 DOI: 10.1073/pnas.0510638103  0.387
2005 Comeron JM, Guthrie TB. Intragenic Hill-Robertson interference influences selection intensity on synonymous mutations in Drosophila. Molecular Biology and Evolution. 22: 2519-30. PMID 16120803 DOI: 10.1093/molbev/msi246  0.478
2004 Qin H, Wu WB, Comeron JM, Kreitman M, Li WH. Intragenic spatial patterns of codon usage bias in prokaryotic and eukaryotic genomes. Genetics. 168: 2245-60. PMID 15611189 DOI: 10.1534/Genetics.104.030866  0.641
2003 Comeron JM, Kreitman M, De La Vega FM. On the power to detect SNP/phenotype association in candidate quantitative trait loci genomic regions: a simulation study. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 478-89. PMID 12603051  0.603
2003 Duan J, Wainwright MS, Comeron JM, Saitou N, Sanders AR, Gelernter J, Gejman PV. Synonymous mutations in the human dopamine receptor D2 (DRD2) affect mRNA stability and synthesis of the receptor. Human Molecular Genetics. 12: 205-16. PMID 12554675 DOI: 10.1093/Hmg/Ddg055  0.307
2002 Llopart A, Comeron JM, Brunet FG, Lachaise D, Long M. Intron presence-absence polymorphism in Drosophila driven by positive Darwinian selection. Proceedings of the National Academy of Sciences of the United States of America. 99: 8121-6. PMID 12060758 DOI: 10.1073/Pnas.122570299  0.46
2002 Comeron JM, Kreitman M. Population, evolutionary and genomic consequences of interference selection. Genetics. 161: 389-410. PMID 12019253  0.754
2000 Comeron JM, Kreitman M. The correlation between intron length and recombination in drosophila. Dynamic equilibrium between mutational and selective forces. Genetics. 156: 1175-90. PMID 11063693  0.694
1999 Kreitman M, Comeron JM. Coding sequence evolution. Current Opinion in Genetics & Development. 9: 637-41. PMID 10607619 DOI: 10.1016/S0959-437X(99)00034-9  0.599
1999 Comeron JM, Kreitman M, Aguadé M. Natural selection on synonymous sites is correlated with gene length and recombination in Drosophila. Genetics. 151: 239-49. PMID 9872963  0.753
1998 Comeron JM, Kreitman M. The correlation between synonymous and nonsynonymous substitutions in Drosophila: mutation, selection or relaxed constraints? Genetics. 150: 767-75. PMID 9755207  0.679
1998 Comeron JM, Aguadé M. An evaluation of measures of synonymous codon usage bias. Journal of Molecular Evolution. 47: 268-74. PMID 9732453 DOI: 10.1007/PL00006384  0.625
1998 Zeng LW, Comeron JM, Chen B, Kreitman M. The molecular clock revisited: the rate of synonymous vs. replacement change in Drosophila. Genetica. 102: 369-82. PMID 9720289 DOI: 10.1023/A:1017035109224  0.611
1996 Comeron JM, Aguadé M. Synonymous substitutions in the Xdh gene of Drosophila: heterogeneous distribution along the coding region. Genetics. 144: 1053-62. PMID 8913749  0.661
1992 Martín-Campos JM, Comerón JM, Miyashita N, Aguadé M. Intraspecific and interspecific variation at the y-ac-sc region of Drosophila simulans and Drosophila melanogaster. Genetics. 130: 805-16. PMID 1582559  0.645
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