| Year |
Citation |
Score |
| 2020 |
Gao F, Danson AE, Ye F, Jovanovic M, Buck M, Zhang X. Bacterial Enhancer Binding Proteins-AAA Proteins in Transcription Activation. Biomolecules. 10. PMID 32106553 DOI: 10.3390/biom10030351 |
0.305 |
|
| 2020 |
Ye F, Kotta-Loizou I, Jovanovic M, Liu X, Dryden DT, Buck M, Zhang X. Structural basis of transcription inhibition by the DNA mimic protein Ocr of bacteriophage T7. Elife. 9. PMID 32039758 DOI: 10.7554/Elife.52125 |
0.358 |
|
| 2020 |
Williams RM, Yates LA, Zhang X. Structures and regulations of ATM and ATR, master kinases in genome integrity. Current Opinion in Structural Biology. 61: 98-105. PMID 31924595 DOI: 10.1016/J.Sbi.2019.12.010 |
0.328 |
|
| 2020 |
Ye F, Kotta-Loizou I, Jovanovic M, Liu X, Dryden DT, Buck M, Zhang X. Author response: Structural basis of transcription inhibition by the DNA mimic protein Ocr of bacteriophage T7 Elife. DOI: 10.7554/Elife.52125.Sa2 |
0.315 |
|
| 2019 |
Sun Y, McCorvie TJ, Yates LA, Zhang X. Structural basis of homologous recombination. Cellular and Molecular Life Sciences : Cmls. PMID 31748913 DOI: 10.1007/S00018-019-03365-1 |
0.341 |
|
| 2019 |
Yates LA, Williams RM, Hailemariam S, Ayala R, Burgers P, Zhang X. Cryo-EM Structure of Nucleotide-Bound Tel1 Unravels the Molecular Basis of Inhibition and Structural Rationale for Disease-Associated Mutations. Structure (London, England : 1993). PMID 31740029 DOI: 10.1016/J.Str.2019.10.012 |
0.313 |
|
| 2019 |
Stach L, Morgan RM, Makhlouf L, Douangamath A, von Delft F, Zhang X, Freemont PS. Crystal structure of the catalytic D2 domain of the AAA + ATPase p97 reveals a putative helical split-washer-type mechanism for substrate unfolding. Febs Letters. PMID 31701538 DOI: 10.1002/1873-3468.13667 |
0.323 |
|
| 2019 |
Daza-Martin M, Starowicz K, Jamshad M, Tye S, Ronson GE, MacKay HL, Chauhan AS, Walker AK, Stone HR, Beesley JFJ, Coles JL, Garvin AJ, Stewart GS, McCorvie TJ, Zhang X, et al. Isomerization of BRCA1-BARD1 promotes replication fork protection. Nature. PMID 31270457 DOI: 10.1038/S41586-019-1363-4 |
0.327 |
|
| 2019 |
Danson AE, Jovanovic M, Buck M, Zhang X. Mechanisms of σ-Dependent Transcription Initiation and Regulation. Journal of Molecular Biology. PMID 31029702 DOI: 10.1016/J.Jmb.2019.04.022 |
0.361 |
|
| 2018 |
Yates LA, Aramayo RJ, Pokhrel N, Caldwell CC, Kaplan JA, Perera RL, Spies M, Antony E, Zhang X. A structural and dynamic model for the assembly of Replication Protein A on single-stranded DNA. Nature Communications. 9: 5447. PMID 30575763 DOI: 10.1038/S41467-018-07883-7 |
0.363 |
|
| 2018 |
Glyde R, Ye F, Jovanovic M, Kotta-Loizou I, Buck M, Zhang X. Structures of Bacterial RNA Polymerase Complexes Reveal the Mechanism of DNA Loading and Transcription Initiation. Molecular Cell. 70: 1111-1120.e3. PMID 29932903 DOI: 10.1016/J.Molcel.2018.05.021 |
0.354 |
|
| 2018 |
Ayala R, Willhoft O, Aramayo RJ, Wilkinson M, McCormack EA, Ocloo L, Wigley DB, Zhang X. Structure and regulation of the human INO80-nucleosome complex. Nature. PMID 29643506 DOI: 10.1038/S41586-018-0021-6 |
0.34 |
|
| 2018 |
Aramayo RJ, Willhoft O, Ayala R, Bythell-Douglas R, Wigley DB, Zhang X. Cryo-EM structures of the human INO80 chromatin-remodeling complex. Nature Structural & Molecular Biology. 25: 37-44. PMID 29323271 DOI: 10.1038/S41594-017-0003-7 |
0.364 |
|
| 2017 |
Sawicka M, Aramayo R, Ayala R, Glyde R, Zhang X. Single-Particle Electron Microscopy Analysis of DNA Repair Complexes. Methods in Enzymology. 592: 159-186. PMID 28668120 DOI: 10.1016/Bs.Mie.2017.03.010 |
0.316 |
|
| 2017 |
Willhoft O, McCormack EA, Aramayo RJ, Bythell-Douglas R, Ocloo L, Zhang X, Wigley DB. Cross-talk within a functional INO80 complex dimer regulates nucleosome sliding. Elife. 6. PMID 28585918 DOI: 10.7554/Elife.25782 |
0.347 |
|
| 2017 |
Glyde R, Ye F, Darbari VC, Zhang N, Buck M, Zhang X. Structures of RNA Polymerase Closed and Intermediate Complexes Reveal Mechanisms of DNA Opening and Transcription Initiation. Molecular Cell. PMID 28579332 DOI: 10.1016/J.Molcel.2017.05.010 |
0.362 |
|
| 2016 |
Zhang N, Darbari VC, Glyde R, Zhang X, Buck M. The bacterial enhancer-dependent RNA polymerase. The Biochemical Journal. 473: 3741-3753. PMID 27789741 DOI: 10.1042/Bcj20160741C |
0.378 |
|
| 2016 |
von Nicolai C, Ehlén Å, Martin C, Zhang X, Carreira A. A second DNA binding site in human BRCA2 promotes homologous recombination. Nature Communications. 7: 12813. PMID 27628236 DOI: 10.1038/Ncomms12813 |
0.335 |
|
| 2015 |
Zhang N, Schäfer J, Sharma A, Rayner L, Zhang X, Tuma R, Stockley P, Buck M. Mutations in RNA Polymerase Bridge Helix and Switch Regions Affect Active-Site Networks and Transcript-Assisted Hydrolysis. Journal of Molecular Biology. PMID 26365052 DOI: 10.1016/J.Jmb.2015.09.005 |
0.336 |
|
| 2015 |
Yang Y, Darbari VC, Zhang N, Lu D, Glyde R, Wang YP, Winkelman JT, Gourse RL, Murakami KS, Buck M, Zhang X. TRANSCRIPTION. Structures of the RNA polymerase-σ54 reveal new and conserved regulatory strategies. Science (New York, N.Y.). 349: 882-5. PMID 26293966 DOI: 10.1126/Science.Aab1478 |
0.364 |
|
| 2015 |
Bush M, Ghosh T, Sawicka M, Moal IH, Bates PA, Dixon R, Zhang X. The structural basis for enhancer-dependent assembly and activation of the AAA transcriptional activator NorR. Molecular Microbiology. 95: 17-30. PMID 25354037 DOI: 10.1111/Mmi.12844 |
0.412 |
|
| 2014 |
Darbari VC, Lawton E, Lu D, Burrows PC, Wiesler S, Joly N, Zhang N, Zhang X, Buck M. Molecular basis of nucleotide-dependent substrate engagement and remodeling by an AAA+ activator Nucleic Acids Research. 42: 9249-9261. PMID 25063294 DOI: 10.1093/Nar/Gku588 |
0.387 |
|
| 2014 |
Harris G, Shen Y, Ha H, Donato A, Wallis S, Zhang X, Zhang Y. Dissecting the signaling mechanisms underlying recognition and preference of food odors Journal of Neuroscience. 34: 9389-9403. PMID 25009271 DOI: 10.1523/Jneurosci.0012-14.2014 |
0.5 |
|
| 2014 |
Liu J, Yang J, Wen J, Yang Y, Wei X, Zhang X, Wang YP. Mutational analysis of dimeric linkers in peri- and cytoplasmic domains of histidine kinase DctB reveals their functional roles in signal transduction. Open Biology. 4: 140023. PMID 24898140 DOI: 10.1098/Rsob.140023 |
0.318 |
|
| 2014 |
Ewens CA, Panico S, Kloppsteck P, McKeown C, Ebong IO, Robinson C, Zhang X, Freemont PS. The p97-FAF1 protein complex reveals a common mode of p97 adaptor binding. The Journal of Biological Chemistry. 289: 12077-84. PMID 24619421 DOI: 10.1074/Jbc.M114.559591 |
0.333 |
|
| 2014 |
Yeung HO, Förster A, Bebeacua C, Niwa H, Ewens C, McKeown C, Zhang X, Freemont PS. Inter-ring rotations of AAA ATPase p97 revealed by electron cryomicroscopy. Open Biology. 4: 130142. PMID 24598262 DOI: 10.1098/Rsob.130142 |
0.361 |
|
| 2014 |
Sharma A, Leach RN, Gell C, Zhang N, Burrows PC, Shepherd DA, Wigneshweraraj S, Smith DA, Zhang X, Buck M, Stockley PG, Tuma R. Domain movements of the enhancer-dependent sigma factor drive DNA delivery into the RNA polymerase active site: insights from single molecule studies. Nucleic Acids Research. 42: 5177-90. PMID 24553251 DOI: 10.1093/Nar/Gku146 |
0.386 |
|
| 2014 |
Luo L, Cook N, Venkatachalam V, Martinez-Velazquez LA, Zhang X, Calvo AC, Hawk J, MacInnis BL, Frank M, Ng JH, Klein M, Gershow M, Hammarlund M, Goodman MB, Colón-Ramos DA, et al. Bidirectional thermotaxis in Caenorhabditis elegans is mediated by distinct sensorimotor strategies driven by the AFD thermosensory neurons. Proceedings of the National Academy of Sciences of the United States of America. 111: 2776-81. PMID 24550307 DOI: 10.1073/Pnas.1315205111 |
0.348 |
|
| 2013 |
Qin Y, Zhang X, Zhang Y. A neuronal signaling pathway of CaMKII and Gqα regulates experience-dependent transcription of tph-1. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 925-35. PMID 23325232 DOI: 10.1523/Jneurosci.2355-12.2013 |
0.541 |
|
| 2012 |
Saravanan M, Wuerges J, Bose D, McCormack EA, Cook NJ, Zhang X, Wigley DB. Interactions between the nucleosome histone core and Arp8 in the INO80 chromatin remodeling complex Proceedings of the National Academy of Sciences of the United States of America. 109: 20883-20888. PMID 23213201 DOI: 10.1073/Pnas.1214735109 |
0.325 |
|
| 2012 |
Zhang X, Zhang Y. DBL-1, a TGF-β, is essential for Caenorhabditis elegans aversive olfactory learning. Proceedings of the National Academy of Sciences of the United States of America. 109: 17081-6. PMID 23019581 DOI: 10.1073/Pnas.1205982109 |
0.408 |
|
| 2012 |
Niwa H, Ewens CA, Tsang C, Yeung HO, Zhang X, Freemont PS. The role of the N-domain in the ATPase activity of the mammalian AAA ATPase p97/VCP. The Journal of Biological Chemistry. 287: 8561-70. PMID 22270372 DOI: 10.1074/Jbc.M111.302778 |
0.314 |
|
| 2012 |
Bebeacua C, Förster A, McKeown C, Meyer HH, Zhang X, Freemont PS. Distinct conformations of the protein complex p97-Ufd1-Npl4 revealed by electron cryomicroscopy. Proceedings of the National Academy of Sciences of the United States of America. 109: 1098-103. PMID 22232657 DOI: 10.1073/Pnas.1114341109 |
0.326 |
|
| 2012 |
Kloppsteck P, Ewens CA, Förster A, Zhang X, Freemont PS. Regulation of p97 in the ubiquitin-proteasome system by the UBX protein-family. Biochimica Et Biophysica Acta. 1823: 125-129. PMID 21963883 DOI: 10.1016/J.Bbamcr.2011.09.006 |
0.349 |
|
| 2012 |
Joly N, Zhang N, Buck M, Zhang X. Coupling AAA protein function to regulated gene expression. Biochimica Et Biophysica Acta. 1823: 108-116. PMID 21906631 DOI: 10.1016/J.Bbamcr.2011.08.012 |
0.382 |
|
| 2011 |
Fillet S, Krell T, Morel B, Lu D, Zhang X, Ramos JL. Intramolecular signal transmission in a tetrameric repressor of the IclR family. Proceedings of the National Academy of Sciences of the United States of America. 108: 15372-7. PMID 21876158 DOI: 10.1073/Pnas.1018894108 |
0.331 |
|
| 2011 |
Jovanovic M, Burrows PC, Bose D, Cámara B, Wiesler S, Zhang X, Wigneshweraraj S, Weinzierl ROJ, Buck M. Activity Map of the Escherichia coli RNA Polymerase Bridge Helix Journal of Biological Chemistry. 286: 14469-14479. PMID 21357417 DOI: 10.1074/Jbc.M110.212902 |
0.355 |
|
| 2011 |
Bush M, Ghosh T, Tucker N, Zhang X, Dixon R. Transcriptional regulation by the dedicated nitric oxide sensor, NorR: a route towards NO detoxification. Biochemical Society Transactions. 39: 289-93. PMID 21265790 DOI: 10.1042/Bst0390289 |
0.371 |
|
| 2011 |
Klein BJ, Bose D, Baker KJ, Yusoff ZM, Zhang X, Murakami KS. RNA polymerase and transcription elongation factor Spt4/5 complex structure. Proceedings of the National Academy of Sciences of the United States of America. 108: 546-50. PMID 21187417 DOI: 10.1073/Pnas.1013828108 |
0.345 |
|
| 2010 |
Lu D, Fillet S, Meng C, Alguel Y, Kloppsteck P, Bergeron J, Krell T, Gallegos MT, Ramos J, Zhang X. Crystal structure of TtgV in complex with its DNA operator reveals a general model for cooperative DNA binding of tetrameric gene regulators. Genes & Development. 24: 2556-65. PMID 21078819 DOI: 10.1101/Gad.603510 |
0.352 |
|
| 2010 |
Ghosh T, Bose D, Zhang X. Mechanisms for activating bacterial RNA polymerase Fems Microbiology Reviews. 34: 611-627. PMID 20629756 DOI: 10.1111/J.1574-6976.2010.00239.X |
0.382 |
|
| 2010 |
Bush M, Ghosh T, Tucker N, Zhang X, Dixon R. Nitric oxide-responsive interdomain regulation targets the σ54-interaction surface in the enhancer binding protein NorR. Molecular Microbiology. 77: 1278-88. PMID 20624215 DOI: 10.1111/J.1365-2958.2010.07290.X |
0.393 |
|
| 2010 |
Sweeney TR, Cisnetto V, Bose D, Bailey M, Wilson JR, Zhang X, Belsham GJ, Curry S. Foot-and-mouth disease virus 2C is a hexameric AAA+ protein with a coordinated ATP hydrolysis mechanism. The Journal of Biological Chemistry. 285: 24347-59. PMID 20507978 DOI: 10.1074/Jbc.M110.129940 |
0.34 |
|
| 2010 |
Daniels C, Daddaoua A, Lu D, Zhang X, Ramos JL. Domain cross-talk during effector binding to the multidrug binding TTGR regulator. The Journal of Biological Chemistry. 285: 21372-81. PMID 20435893 DOI: 10.1074/Jbc.M110.113282 |
0.354 |
|
| 2010 |
Nan B, Liu X, Zhou Y, Liu J, Zhang L, Wen J, Zhang X, Su XD, Wang YP. From signal perception to signal transduction: ligand-induced dimeric switch of DctB sensory domain in solution. Molecular Microbiology. 75: 1484-94. PMID 20149110 DOI: 10.1111/J.1365-2958.2010.07069.X |
0.305 |
|
| 2010 |
Tucker NP, Ghosh T, Bush M, Zhang X, Dixon R. Essential roles of three enhancer sites in sigma54-dependent transcription by the nitric oxide sensing regulatory protein NorR. Nucleic Acids Research. 38: 1182-94. PMID 19955233 DOI: 10.1093/Nar/Gkp1065 |
0.353 |
|
| 2009 |
Herrera MC, Krell T, Zhang X, Ramos JL. PhhR Binds to Target Sequences at Different Distances with Respect to RNA Polymerase in Order to Activate Transcription Journal of Molecular Biology. 394: 576-586. PMID 19781550 DOI: 10.1016/J.Jmb.2009.09.045 |
0.351 |
|
| 2009 |
Burrows PC, Schumacher J, Amartey S, Ghosh T, Burgis TA, Zhang X, Nixon BT, Buck M. Functional roles of the pre-sensor I insertion sequence in an AAA+ bacterial enhancer binding protein. Molecular Microbiology. 73: 519-33. PMID 19486295 DOI: 10.1111/J.1365-2958.2009.06744.X |
0.362 |
|
| 2009 |
Burrows PC, Joly N, Cannon WV, Cámara BP, Rappas M, Zhang X, Dawes K, Nixon BT, Wigneshweraraj SR, Buck M. Coupling sigma factor conformation to RNA polymerase reorganisation for DNA melting. Journal of Molecular Biology. 387: 306-19. PMID 19356588 DOI: 10.1016/J.Jmb.2009.01.052 |
0.345 |
|
| 2009 |
Lu D, Wörmann ME, Zhang X, Schneewind O, Gründling A, Freemont PS. Structure-based mechanism of lipoteichoic acid synthesis by Staphylococcus aureus LtaS. Proceedings of the National Academy of Sciences of the United States of America. 106: 1584-9. PMID 19168632 DOI: 10.1073/Pnas.0809020106 |
0.321 |
|
| 2009 |
Fillet S, Vélez M, Lu D, Zhang X, Gallegos MT, Ramos JL. TtgV represses two different promoters by recognizing different sequences. Journal of Bacteriology. 191: 1901-9. PMID 19114485 DOI: 10.1128/Jb.01504-08 |
0.315 |
|
| 2008 |
Bose D, Pape T, Burrows PC, Rappas M, Wigneshweraraj SR, Buck M, Zhang X. Organization of an Activator-Bound RNA Polymerase Holoenzyme Molecular Cell. 32: 337-346. PMID 18995832 DOI: 10.1016/J.Molcel.2008.09.015 |
0.359 |
|
| 2008 |
Zhang X, Wigley DB. The 'glutamate switch' provides a link between ATPase activity and ligand binding in AAA+ proteins Nature Structural & Molecular Biology. 15: 1223-1227. PMID 18849995 DOI: 10.1038/Nsmb.1501 |
0.346 |
|
| 2008 |
Burrows PC, Wigneshweraraj S, Bose D, Joly N, Schumacher J, Rappas M, Pape T, Stockley PG, Zhang X, Buck M. Visualizing the organization and reorganization of transcription complexes for gene expression Biochemical Society Transactions. 36: 776-779. PMID 18631157 DOI: 10.1042/Bst0360776 |
0.373 |
|
| 2008 |
Schumacher J, Joly N, Claeys-Bouuaert IL, Aziz SA, Rappas M, Zhang X, Buck M. Mechanism of Homotropic Control to Coordinate Hydrolysis in a Hexameric AAA+ Ring ATPase Journal of Molecular Biology. 381: 1-12. PMID 18599077 DOI: 10.1016/J.Jmb.2008.05.075 |
0.335 |
|
| 2008 |
Wigneshweraraj S, Bose D, Burrows PC, Joly N, Schumacher J, Rappas M, Pape T, Zhang X, Stockley P, Severinov K, Buck M. Modus operandi of the bacterial RNA polymerase containing the σ54 promoter‐specificity factor Molecular Microbiology. 68: 538-546. PMID 18331472 DOI: 10.1111/J.1365-2958.2008.06181.X |
0.307 |
|
| 2008 |
Bose D, Joly N, Pape T, Rappas M, Schumacher J, Buck M, Zhang X. Dissecting the ATP hydrolysis pathway of bacterial enhancer-binding proteins. Biochemical Society Transactions. 36: 83-88. PMID 18208391 DOI: 10.1042/Bst0360083 |
0.404 |
|
| 2008 |
Yeung HO, Kloppsteck P, Niwa H, Isaacson RL, Matthews S, Zhang X, Freemont PS. Insights into adaptor binding to the AAA protein p97. Biochemical Society Transactions. 36: 62-7. PMID 18208387 DOI: 10.1042/Bst0360062 |
0.354 |
|
| 2008 |
Joly N, Rappas M, Buck M, Zhang X. Trapping of a Transcription Complex Using a New Nucleotide Analogue: AMP Aluminium Fluoride Journal of Molecular Biology. 375: 1206-1211. PMID 18082766 DOI: 10.1016/J.Jmb.2007.11.050 |
0.365 |
|
| 2007 |
Joly N, Rappas M, Wigneshweraraj SR, Zhang X, Buck M. Coupling nucleotide hydrolysis to transcription activation performance in a bacterial enhancer binding protein Molecular Microbiology. 66: 583-595. PMID 17883390 DOI: 10.1111/J.1365-2958.2007.05901.X |
0.396 |
|
| 2007 |
Isaacson RL, Pye VE, Simpson P, Meyer HH, Zhang X, Freemont PS, Matthews S. Detailed structural insights into the p97-Npl4-Ufd1 interface. The Journal of Biological Chemistry. 282: 21361-9. PMID 17491009 DOI: 10.1074/Jbc.M610069200 |
0.34 |
|
| 2007 |
Alguel Y, Meng C, Terán W, Krell T, Ramos JL, Gallegos MT, Zhang X. Crystal structures of multidrug binding protein TtgR in complex with antibiotics and plant antimicrobials Journal of Molecular Biology. 369: 829-840. PMID 17466326 DOI: 10.1016/J.Jmb.2007.03.062 |
0.321 |
|
| 2007 |
Schumacher J, Joly N, Rappas M, Bradley D, Wigneshweraraj SR, Zhang X, Buck M. Sensor I Threonine of the AAA+ ATPase Transcriptional Activator PspF Is Involved in Coupling Nucleotide Triphosphate Hydrolysis to the Restructuring of σ54-RNA Polymerase Journal of Biological Chemistry. 282: 9825-9833. PMID 17242399 DOI: 10.1074/Jbc.M611532200 |
0.364 |
|
| 2007 |
Pye VE, Beuron F, Keetch CA, McKeown C, Robinson CV, Meyer HH, Zhang X, Freemont PS. Structural insights into the p97-Ufd1-Npl4 complex. Proceedings of the National Academy of Sciences of the United States of America. 104: 467-72. PMID 17202270 DOI: 10.1073/Pnas.0603408104 |
0.32 |
|
| 2007 |
Rappas M, Bose D, Zhang X. Bacterial enhancer-binding proteins: unlocking σ54-dependent gene transcription Current Opinion in Structural Biology. 17: 110-116. PMID 17157497 DOI: 10.1016/J.Sbi.2006.11.002 |
0.397 |
|
| 2006 |
Buck M, Bose D, Burrows P, Cannon W, Joly N, Pape T, Rappas M, Schumacher J, Wigneshweraraj S, Zhang X. A second paradigm for gene activation in bacteria. Biochemical Society Transactions. 34: 1067-1071. PMID 17073752 DOI: 10.1042/Bst0341067 |
0.399 |
|
| 2006 |
Suno R, Niwa H, Tsuchiya D, Zhang X, Yoshida M, Morikawa K. Structure of the Whole Cytosolic Region of ATP-Dependent Protease FtsH Molecular Cell. 22: 575-585. PMID 16762831 DOI: 10.1016/J.Molcel.2006.04.020 |
0.334 |
|
| 2006 |
Pye VE, Dreveny I, Briggs LC, Sands C, Beuron F, Zhang X, Freemont PS. Going through the motions: the ATPase cycle of p97. Journal of Structural Biology. 156: 12-28. PMID 16621604 DOI: 10.1016/J.Jsb.2006.03.003 |
0.338 |
|
| 2006 |
Beuron F, Dreveny I, Yuan X, Pye VE, McKeown C, Briggs LC, Cliff MJ, Kaneko Y, Wallis R, Isaacson RL, Ladbury JE, Matthews SJ, Kondo H, Zhang X, Freemont PS. Conformational changes in the AAA ATPase p97-p47 adaptor complex. The Embo Journal. 25: 1967-76. PMID 16601695 DOI: 10.1038/Sj.Emboj.7601055 |
0.335 |
|
| 2006 |
Schumacher J, Joly N, Rappas M, Zhang X, Buck M. Structures and organisation of AAA+ enhancer binding proteins in transcriptional activation. Journal of Structural Biology. 156: 190-199. PMID 16531068 DOI: 10.1016/J.Jsb.2006.01.006 |
0.375 |
|
| 2006 |
Rappas M, Schumacher J, Niwa H, Buck M, Zhang X. Structural Basis of the Nucleotide Driven Conformational Changes in the Aaa(+) Domain of Transcription Activator Pspf. Journal of Molecular Biology. 357: 481-492. PMID 16430918 DOI: 10.1016/J.Jmb.2005.12.052 |
0.391 |
|
| 2006 |
Huo YX, Tian ZX, Rappas M, Wen J, Chen YC, You CH, Zhang X, Buck M, Wang YP, Kolb A. Protein-induced DNA bending clarifies the architectural organization of the sigma54-dependent glnAp2 promoter. Molecular Microbiology. 59: 168-80. PMID 16359326 DOI: 10.1111/J.1365-2958.2005.04943.X |
0.334 |
|
| 2005 |
Wang Q, Song C, Irizarry L, Dai R, Zhang X, Li CC. Multifunctional roles of the conserved Arg residues in the second region of homology of p97/valosin-containing protein. The Journal of Biological Chemistry. 280: 40515-23. PMID 16216872 DOI: 10.1074/Jbc.M509636200 |
0.348 |
|
| 2005 |
Wigneshweraraj SR, Burrows PC, Bordes P, Schumacher J, Rappas M, Finn RD, Cannon WV, Zhang X, Buck M. The second paradigm for activation of transcription. Progress in Nucleic Acid Research and Molecular Biology. 79: 339-369. PMID 16096032 DOI: 10.1016/S0079-6603(04)79007-8 |
0.368 |
|
| 2005 |
Ramos JL, Martínez-Bueno M, Molina-Henares AJ, Terán W, Watanabe K, Zhang X, Gallegos MT, Brennan R, Tobes R. The TetR Family of Transcriptional Repressors Microbiology and Molecular Biology Reviews. 69: 326-356. PMID 15944459 DOI: 10.1128/Mmbr.69.2.326-356.2005 |
0.308 |
|
| 2005 |
Rappas M, Schumacher J, Beuron F, Niwa H, Bordes P, Wigneshweraraj S, Keetch CA, Robinson CV, Buck M, Zhang X. Structural insights into the activity of enhancer-binding proteins Science. 307: 1972-1975. PMID 15790859 DOI: 10.1126/Science.1105932 |
0.37 |
|
| 2005 |
Guazzaroni ME, Krell T, Felipe A, Ruiz R, Meng C, Zhang X, Gallegos MT, Ramos JL. The multidrug efflux regulator TtgV recognizes a wide range of structurally different effectors in solution and complexed with target DNA: evidence from isothermal titration calorimetry. Journal of Biological Chemistry. 280: 20887-20893. PMID 15767250 DOI: 10.1074/Jbc.M500783200 |
0.323 |
|
| 2004 |
Dreveny I, Pye VE, Beuron F, Briggs LC, Isaacson RL, Matthews SJ, McKeown C, Yuan X, Zhang X, Freemont PS. p97 and close encounters of every kind: a brief review. Biochemical Society Transactions. 32: 715-20. PMID 15493996 DOI: 10.1042/Bst0320715 |
0.359 |
|
| 2004 |
Schumacher J, Zhang X, Jones S, Bordes P, Buck M. ATP-dependent transcriptional activation by bacterial PspF AAA+protein. Journal of Molecular Biology. 338: 863-875. PMID 15111053 DOI: 10.1016/J.Jmb.2004.02.071 |
0.383 |
|
| 2004 |
Rappas M, Niwa H, Zhang X. Mechanisms of ATPases--a multi-disciplinary approach. Current Protein & Peptide Science. 5: 89-105. PMID 15078220 DOI: 10.2174/1389203043486874 |
0.343 |
|
| 2004 |
Smith GR, Contreras-Moreira B, Zhang X, Bates PA. A link between sequence conservation and domain motion within the AAA+ family. Journal of Structural Biology. 146: 189-204. PMID 15037250 DOI: 10.1016/J.Jsb.2003.11.022 |
0.333 |
|
| 2004 |
Yuan X, Simpson P, Mckeown C, Kondo H, Uchiyama K, Wallis R, Dreveny I, Keetch C, Zhang X, Robinson C, Freemont P, Matthews S. Structure, dynamics and interactions of p47, a major adaptor of the AAA ATPase, p97 The Embo Journal. 23: 1463-1473. PMID 15029246 DOI: 10.1038/Sj.Emboj.7600152 |
0.333 |
|
| 2004 |
Dreveny I, Kondo H, Uchiyama K, Shaw A, Zhang X, Freemont PS. Structural basis of the interaction between the AAA ATPase p97/VCP and its adaptor protein p47. The Embo Journal. 23: 1030-9. PMID 14988733 DOI: 10.1038/Sj.Emboj.7600139 |
0.349 |
|
| 2004 |
Bordes P, Wigneshweraraj SR, Zhang X, Buck M. Sigma54-dependent transcription activator phage shock protein F of Escherichia coli: a fragmentation approach to identify sequences that contribute to self-association. Biochemical Journal. 378: 735-744. PMID 14659000 DOI: 10.1042/Bj20031464 |
0.363 |
|
| 2003 |
Huyton T, Pye VE, Briggs LC, Flynn TC, Beuron F, Kondo H, Ma J, Zhang X, Freemont PS. The crystal structure of murine p97/VCP at 3.6A. Journal of Structural Biology. 144: 337-48. PMID 14643202 DOI: 10.1016/J.Jsb.2003.10.007 |
0.311 |
|
| 2003 |
Beuron F, Flynn TC, Ma J, Kondo H, Zhang X, Freemont PS. Motions and negative cooperativity between p97 domains revealed by cryo-electron microscopy and quantised elastic deformational model. Journal of Molecular Biology. 327: 619-29. PMID 12634057 DOI: 10.1016/S0022-2836(03)00178-5 |
0.335 |
|
| 2003 |
Bordes P, Wigneshweraraj SR, Schumacher J, Zhang X, Chaney M, Buck M. The ATP hydrolyzing transcription activator phage shock protein F of Escherichia coli: Identifying a surface that binds σ54 Proceedings of the National Academy of Sciences of the United States of America. 100: 2278-2283. PMID 12601152 DOI: 10.1073/Pnas.0537525100 |
0.381 |
|
| 2002 |
Zhang X, Chaney M, Wigneshweraraj SR, Schumacher J, Bordes P, Cannon W, Buck M. Mechanochemical ATPases and transcriptional activation Molecular Microbiology. 45: 895-903. PMID 12180911 DOI: 10.1046/J.1365-2958.2002.03065.X |
0.381 |
|
| 2002 |
Zhang X, Beuron F, Freemont PS. Machinery of protein folding and unfolding. Current Opinion in Structural Biology. 12: 231-238. PMID 11959502 DOI: 10.1016/S0959-440X(02)00315-9 |
0.317 |
|
| 2001 |
Yuan X, Shaw A, Zhang X, Kondo H, Lally J, Freemont PS, Matthews S. Solution structure and interaction surface of the C-terminal domain from p47: a major p97-cofactor involved in SNARE disassembly. Journal of Molecular Biology. 311: 255-263. PMID 11478859 DOI: 10.1006/Jmbi.2001.4864 |
0.34 |
|
| 2001 |
Dulic A, Bates PA, Zhang X, Martin SR, Freemont PS, Lindahl T, Barnes DE. BRCT domain interactions in the heterodimeric DNA repair protein XRCC1-DNA ligase III Biochemistry. 40: 5906-5913. PMID 11352725 DOI: 10.1021/Bi002701E |
0.34 |
|
| 2000 |
Zhang X, Shaw A, Bates PA, Newman RH, Gowen B, Orlova E, Gorman MA, Kondo H, Dokurno P, Lally J, Leonard G, Meyer H, van Heel M, Freemont PS. Structure of the AAA ATPase p97. Molecular Cell. 6: 1473-84. PMID 11163219 DOI: 10.1016/S1097-2765(00)00143-X |
0.313 |
|
| 2000 |
Huyton T, Bates PA, Zhang X, Sternberg MJE, Freemont PS. The BRCA1 C-terminal domain: structure and function Mutation Research-Dna Repair. 460: 319-332. PMID 10946236 DOI: 10.1016/S0921-8777(00)00034-3 |
0.326 |
|
| 1998 |
Rosenthal PB, Zhang X, Formanowski F, Fitz W, Wong CH, Meier-Ewert H, Skehel JJ, Wiley DC. Structure of the haemagglutinin-esterase-fusion glycoprotein of influenza C virus. Nature. 396: 92-6. PMID 9817207 DOI: 10.1038/23974 |
0.302 |
|
| 1998 |
Zhang X, Moréra S, Bates PA, Whitehead PC, Coffer AI, Hainbucher K, Nash RA, Sternberg MJE, Lindahl T, Freemont PS. Structure of an XRCC1 BRCT domain: A new protein-protein interaction module Embo Journal. 17: 6404-6411. PMID 9799248 DOI: 10.1093/Emboj/17.21.6404 |
0.352 |
|
| Show low-probability matches. |