Year |
Citation |
Score |
2022 |
Zhang DY, Wang J, Fleeman RM, Kuhn MK, Swulius MT, Proctor EA, Dokholyan NV. Monosialotetrahexosylganglioside Promotes Early Aβ42 Oligomer Formation and Maintenance. Acs Chemical Neuroscience. PMID 35713284 DOI: 10.1021/acschemneuro.2c00221 |
0.435 |
|
2019 |
Proctor EA, Mowrey DD, Dokholyan NV. β-Methylamino-L-alanine substitution of serine in SOD1 suggests a direct role in ALS etiology. Plos Computational Biology. 15: e1007225. PMID 31323035 DOI: 10.1371/Journal.Pcbi.1007225 |
0.562 |
|
2018 |
Wang C, Aleksandrov AA, Yang Z, Forouhar F, Proctor EA, Kota P, An J, Kaplan A, Khazanov N, Boël G, Stockwell BR, Senderowitz H, Dokholyan NV, Riordan JR, Brouillette CG, et al. Ligand binding to a remote site thermodynamically corrects the F508del mutation in the human cystic fibrosis transmembrane conductance regulator. The Journal of Biological Chemistry. PMID 29903914 DOI: 10.1074/Jbc.Ra117.000819 |
0.716 |
|
2016 |
Fay JM, Zhu C, Proctor EA, Tao Y, Cui W, Ke H, Dokholyan NV. A Phosphomimetic Mutation Stabilizes SOD1 and Rescues Cell Viability in the Context of an ALS-Associated Mutation. Structure (London, England : 1993). PMID 27667694 DOI: 10.1016/J.Str.2016.08.011 |
0.569 |
|
2016 |
Hadi-Alijanvand H, Proctor EA, Ding F, Dokholyan NV, Moosavi-Movahedi AA. A hidden aggregation-prone structure in the heart of hypoxia inducible factor prolyl hydroxylase. Proteins. PMID 26868435 DOI: 10.1002/Prot.25011 |
0.641 |
|
2015 |
Proctor EA, Fee L, Tao Y, Redler RL, Fay JM, Zhang Y, Lv Z, Mercer IP, Deshmukh M, Lyubchenko YL, Dokholyan NV. Nonnative SOD1 trimer is toxic to motor neurons in a model of amyotrophic lateral sclerosis. Proceedings of the National Academy of Sciences of the United States of America. PMID 26719414 DOI: 10.1073/Pnas.1516725113 |
0.553 |
|
2015 |
Proctor EA, Dokholyan NV. Applications of Discrete Molecular Dynamics in biology and medicine. Current Opinion in Structural Biology. 37: 9-13. PMID 26638022 DOI: 10.1016/J.Sbi.2015.11.001 |
0.595 |
|
2015 |
Proctor EA, Kota P, Aleksandrov AA, He L, Riordan JR, Dokholyan NV. Rational Coupled Dynamics Network Manipulation Rescues Disease-Relevant Mutant Cystic Fibrosis Transmembrane Conductance Regulator. Chemical Science (Royal Society of Chemistry : 2010). 6: 1237-1246. PMID 25685315 DOI: 10.1039/C4Sc01320D |
0.725 |
|
2014 |
Hasan SS, Proctor EA, Yamashita E, Dokholyan NV, Cramer WA. Traffic within the cytochrome b6f lipoprotein complex: gating of the quinone portal. Biophysical Journal. 107: 1620-8. PMID 25296314 DOI: 10.1016/J.Bpj.2014.08.003 |
0.472 |
|
2014 |
Nedd S, Redler RL, Proctor EA, Dokholyan NV, Alexandrova AN. Cu,Zn-superoxide dismutase without Zn is folded but catalytically inactive. Journal of Molecular Biology. 426: 4112-24. PMID 25083917 DOI: 10.1016/J.Jmb.2014.07.016 |
0.515 |
|
2014 |
Redler RL, Shirvanyants D, Dagliyan O, Ding F, Kim DN, Kota P, Proctor EA, Ramachandran S, Tandon A, Dokholyan NV. Computational approaches to understanding protein aggregation in neurodegeneration. Journal of Molecular Cell Biology. 6: 104-15. PMID 24620031 DOI: 10.1093/Jmcb/Mju007 |
0.705 |
|
2014 |
Nedd S, Redler RL, Proctor EA, Dokholyan NV, Alexandrova AN. Cu,Zn-superoxide dismutase without Zn is folded but catalytically inactive Journal of Molecular Biology. 426: 4112-4124. DOI: 10.1016/j.jmb.2014.07.016 |
0.409 |
|
2014 |
Dokholyan NV, Redler RL, Proctor EA, Ding FV, Wilcox K, Caplow M. Post-Translational Modifications Promote Formation of SOD1 Oligomers with Potential Toxicity in ALS Biophysical Journal. 106: 33a-34a. DOI: 10.1016/J.Bpj.2013.11.258 |
0.742 |
|
2013 |
Barison N, Cendron L, Loconte V, Proctor EA, Dokholyan NV, Zanotti G. Protein HP1028 from the human pathogen Helicobacter pylori belongs to the lipocalin family. Acta Crystallographica. Section D, Biological Crystallography. 69: 1387-94. PMID 23897462 DOI: 10.1107/S0907444913008160 |
0.526 |
|
2013 |
Proctor EA, Kota P, Demarest SJ, Caravella JA, Dokholyan NV. Highly covarying residues have a functional role in antibody constant domains. Proteins. 81: 884-95. PMID 23280585 DOI: 10.1002/Prot.24247 |
0.703 |
|
2013 |
Proctor EA, Kota P, Demarest SJ, Caravella JA, Dokholyan NV. Metric to distinguish closely related domain families using sequence information. Journal of Molecular Biology. 425: 475-8. PMID 23219465 DOI: 10.1016/J.Jmb.2012.11.031 |
0.675 |
|
2013 |
Hadi-Alijanvand H, Proctor EA, Goliaei B, Dokholyan NV, Moosavi-Movahedi AA. Correction: Thermal unfolding pathway of PHD2 catalytic domain in three different PHD2 species: Computational approaches (PLoS ONE) Plos One. 8. DOI: 10.1371/Annotation/C414C3Ec-B64E-4Cf4-Bff2-7Bb7B3Abb558 |
0.505 |
|
2012 |
Hadi-Alijanvand H, Proctor EA, Goliaei B, Dokholyan NV, Moosavi-Movahedi AA. Thermal unfolding pathway of PHD2 catalytic domain in three different PHD2 species: computational approaches. Plos One. 7: e47061. PMID 23077544 DOI: 10.1371/Journal.Pone.0047061 |
0.555 |
|
2012 |
Proctor EA, Yin S, Tropsha A, Dokholyan NV. Discrete molecular dynamics distinguishes nativelike binding poses from decoys in difficult targets. Biophysical Journal. 102: 144-51. PMID 22225808 DOI: 10.1016/J.Bpj.2011.11.4008 |
0.519 |
|
2012 |
Proctor EA, Ding F, Dokholyan NV. ChemInform Abstract: Discrete Molecular Dynamics Cheminform. 43: no-no. DOI: 10.1002/chin.201240278 |
0.404 |
|
2011 |
Dagliyan O, Proctor EA, D'Auria KM, Ding F, Dokholyan NV. Structural and dynamic determinants of protein-peptide recognition. Structure (London, England : 1993). 19: 1837-45. PMID 22153506 DOI: 10.1016/J.Str.2011.09.014 |
0.726 |
|
2011 |
Redler RL, Wilcox KC, Proctor EA, Fee L, Caplow M, Dokholyan NV. Glutathionylation at Cys-111 induces dissociation of wild type and FALS mutant SOD1 dimers. Biochemistry. 50: 7057-66. PMID 21739997 DOI: 10.1021/Bi200614Y |
0.733 |
|
2011 |
Proctor EA, Ding F, Dokholyan NV. Structural and thermodynamic effects of post-translational modifications in mutant and wild type Cu, Zn superoxide dismutase. Journal of Molecular Biology. 408: 555-67. PMID 21396374 DOI: 10.1016/J.Jmb.2011.03.004 |
0.617 |
|
2011 |
Hadi-Alijanvand H, Rouhani M, Proctor EA, Dokholyan NV, Moosavi-Movahedi AA. A folding pathway-dependent score to recognize membrane proteins. Plos One. 6: e16778. PMID 21390303 DOI: 10.1371/Journal.Pone.0016778 |
0.49 |
|
2011 |
Proctor EA, Ding F, Dokholyan NV. Discrete molecular dynamics Wiley Interdisciplinary Reviews: Computational Molecular Science. 1: 80-92. DOI: 10.1002/Wcms.4 |
0.417 |
|
2009 |
Yin S, Proctor EA, Lugovskoy AA, Dokholyan NV. Fast screening of protein surfaces using geometric invariant fingerprints. Proceedings of the National Academy of Sciences of the United States of America. 106: 16622-6. PMID 19805347 DOI: 10.1073/Pnas.0906146106 |
0.539 |
|
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