Mohammad Mofrad - Publications

Bioengineering University of California, Berkeley, Berkeley, CA 

125 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Didonna A, Damotte V, Shams H, Matsunaga A, Caillier SJ, Dandekar R, Misra MK, Mofrad MRK, Oksenberg JR, Hollenbach JA. A splice acceptor variant in HLA-DRA affects the conformation and cellular localization of the class II DR alpha-chain. Immunology. PMID 32986852 DOI: 10.1111/imm.13273  0.32
2020 Anderson KM, Augusto DG, Dandekar R, Shams H, Zhao C, Yusufali T, Montero-Martín G, Marin WM, Nemat-Gorgani N, Creary LE, Caillier S, Mofrad MRK, Parham P, Fernández-Viña M, Oksenberg JR, et al. Killer Cell Immunoglobulin-like Receptor Variants Are Associated with Protection from Symptoms Associated with More Severe Course in Parkinson Disease. Journal of Immunology (Baltimore, Md. : 1950). PMID 32709660 DOI: 10.4049/jimmunol.2000144  0.32
2020 Haydari Z, Shams H, Jahed Z, Mofrad MRK. Kindlin Assists Talin to Promote Integrin Activation. Biophysical Journal. PMID 32191864 DOI: 10.1016/j.bpj.2020.02.023  0.32
2019 Van Agthoven JF, Shams H, Cochran FV, Alonso JL, Kintzing JR, Garakani K, Adair BD, Xiong JP, Mofrad MRK, Cochran JR, Arnaout MA. Structural Basis of the Differential Binding of Engineered Knottins to Integrins αVβ3 and α5β1. Structure (London, England : 1993). PMID 31353240 DOI: 10.1016/j.str.2019.06.011  0.32
2019 Didonna A, Cantó E, Shams H, Isobe N, Zhao C, Caillier SJ, Condello C, Yamate-Morgan H, Tiwari-Woodruff SK, Mofrad MRK, Hauser SL, Oksenberg JR. Sex-specific Tau methylation patterns and synaptic transcriptional alterations are associated with neural vulnerability during chronic neuroinflammation. Journal of Autoimmunity. PMID 31010726 DOI: 10.1016/j.jaut.2019.04.003  0.32
2019 Jahed Z, Mofrad MR. The nucleus feels the force, LINCed in or not! Current Opinion in Cell Biology. 58: 114-119. PMID 31002996 DOI: 10.1016/  0.32
2019 Jahed Z, Hao H, Thakkar V, Vu UT, Valdez VA, Rathish A, Tolentino C, Kim SCJ, Fadavi D, Starr DA, Mofrad MRK. Role of KASH domain lengths in the regulation of LINC complexes. Molecular Biology of the Cell. mbcE19020079. PMID 30995155 DOI: 10.1091/mbc.E19-02-0079  0.32
2019 Jahed Z, Haydari Z, Rathish A, Mofrad MRK. Kindlin Is Mechanosensitive: Force-Induced Conformational Switch Mediates Cross-Talk among Integrins. Biophysical Journal. PMID 30819565 DOI: 10.1016/j.bpj.2019.01.038  0.32
2018 Cain NE, Jahed Z, Schoenhofen A, Valdez VA, Elkin B, Hao H, Harris NJ, Herrera LA, Woolums BM, Mofrad MRK, Luxton GWG, Starr DA. Conserved SUN-KASH Interfaces Mediate LINC Complex-Dependent Nuclear Movement and Positioning. Current Biology : Cb. PMID 30245107 DOI: 10.1016/j.cub.2018.08.001  0.32
2018 Jahed Z, Vu UT, Fadavi D, Ke H, Rathish A, Kim SCJ, Feng W, Mofrad MRK. A Molecular Model for LINC complex regulation: Activation of SUN2 for KASH binding. Molecular Biology of the Cell. mbcE18040266. PMID 29995584 DOI: 10.1091/mbc.E18-04-0266  0.32
2018 Jahed Z, Fadavi D, Vu UT, Asgari E, Luxton GWG, Mofrad MRK. Molecular Insights into the Mechanisms of SUN1 Oligomerization in the Nuclear Envelope. Biophysical Journal. 114: 1190-1203. PMID 29539404 DOI: 10.1016/j.bpj.2018.01.015  0.32
2017 Shams H, Soheilypour M, Peyro M, Moussavi-Baygi R, Mofrad MRK. Looking "Under the Hood" of Cellular Mechanotransduction with Computational Tools: A Systems Biomechanics Approach across Multiple Scales. Acs Biomaterials Science & Engineering. 3: 2712-2726. PMID 33418698 DOI: 10.1021/acsbiomaterials.7b00117  0.32
2017 Shams H, Hoffman BD, Mofrad M. The ?stressful? life of adhesion molecules: On the molecular mechanosensitivity of adhesomes. Journal of Biomechanical Engineering. PMID 29272321 DOI: 10.1115/1.4038812  0.32
2017 Shams H, Mofrad MRK. α-Actinin Induces a Kink in the Transmembrane Domain of β3-Integrin and Impairs Activation via Talin. Biophysical Journal. 113: 948-956. PMID 28834730 DOI: 10.1016/j.bpj.2017.06.064  0.32
2017 Seo BB, Jahed Z, Coggan JA, Chau YY, Rogowski JL, Gu FX, Wen W, Mofrad MRK, Tsui TY. Mechanical Contact Characteristics of PC3 Human Prostate Cancer Cells on Complex-Shaped Silicon Micropillars. Materials (Basel, Switzerland). 10. PMID 28767082 DOI: 10.3390/ma10080892  0.32
2017 Garakani K, Shams H, Mofrad MRK. Mechanosensitive Conformation of Vinculin Regulates Its Binding to MAPK1. Biophysical Journal. 112: 1885-1893. PMID 28494959 DOI: 10.1016/j.bpj.2017.03.039  0.32
2017 Jahed Z, Shahsavan H, Verma MS, Rogowski JL, Seo BB, Zhao B, Tsui TY, Gu FX, Mofrad MR. Bacterial Networks on Hydrophobic Micropillars. Acs Nano. PMID 28045495 DOI: 10.1021/acsnano.6b06985  0.32
2016 Boyer PD, Shams H, Baker SL, Mofrad MRK, Islam MF, Dahl KN. Enhanced intracellular delivery of small molecules and drugs via non-covalent ternary dispersions of single-wall carbon nanotubes. Journal of Materials Chemistry. B. 4: 1324-1330. PMID 32262987 DOI: 10.1039/c5tb02016f  0.32
2016 Jahed Z, Zareian R, Chau YY, Seo BB, West M, Tsui TY, Wen W, Mofrad MR. Differential Collective and Single Cell Behaviors on Silicon Micropillar Arrays. Acs Applied Materials & Interfaces. PMID 27536959 DOI: 10.1021/acsami.6b08668  1
2016 Jahed Z, Soheilypour M, Peyro M, Mofrad MR. The LINC and NPC relationship - it's complicated! Journal of Cell Science. PMID 27530973 DOI: 10.1242/jcs.184184  0.32
2016 Shams H, Golji J, Garakani K, Mofrad MR. Dynamic Regulation of α-Actinin's Calponin Homology Domains on F-Actin. Biophysical Journal. 110: 1444-55. PMID 27028653 DOI: 10.1016/j.bpj.2016.02.024  1
2016 Gu J, Chen PZ, Seo BB, Jardin JM, Verma MS, Jahed Z, Mofrad MRK, Gu FX, Tsui TY. Adhesion characteristics of Staphylococcus aureus bacterial cells on funnel-shaped palladium–cobalt alloy nanostructures Journal of Experimental Nanoscience. 11: 480-489. DOI: 10.1080/17458080.2015.1083126  1
2016 Boyer PD, Shams H, Baker SL, Mofrad MRK, Islam MF, Dahl KN. Enhanced intracellular delivery of small molecules and drugs via non-covalent ternary dispersions of single-wall carbon nanotubes Journal of Materials Chemistry B. 4: 1324-1330. DOI: 10.1039/c5tb02016f  1
2016 Soheilypour M, Peyro M, Jahed Z, Mofrad MRK. On the Nuclear Pore Complex and Its Roles in Nucleo-Cytoskeletal Coupling and Mechanobiology Cellular and Molecular Bioengineering. 1-10. DOI: 10.1007/s12195-016-0443-x  1
2015 Peyro M, Soheilypour M, Ghavami A, Mofrad MR. Nucleoporin's Like Charge Regions Are Major Regulators of FG Coverage and Dynamics Inside the Nuclear Pore Complex. Plos One. 10: e0143745. PMID 26658558 DOI: 10.1371/journal.pone.0143745  1
2015 Asgari E, Mofrad MR. Continuous Distributed Representation of Biological Sequences for Deep Proteomics and Genomics. Plos One. 10: e0141287. PMID 26555596 DOI: 10.1371/journal.pone.0141287  1
2015 Jahed Z, Shams H, Mofrad MR. A Disulfide Bond Is Required for the Transmission of Forces through SUN-KASH Complexes. Biophysical Journal. 109: 501-9. PMID 26244732 DOI: 10.1016/j.bpj.2015.06.057  1
2015 Lazarus C, Soheilypour M, Mofrad MR. Torsional behavior of axonal microtubule bundles. Biophysical Journal. 109: 231-9. PMID 26200859 DOI: 10.1016/j.bpj.2015.06.029  1
2015 Heidari M, Mehrbod M, Ejtehadi MR, Mofrad MR. Cooperation within von Willebrand factors enhances adsorption mechanism. Journal of the Royal Society, Interface / the Royal Society. 12: 20150334. PMID 26179989 DOI: 10.1098/rsif.2015.0334  1
2015 Truong T, Shams H, Mofrad MR. Mechanisms of integrin and filamin binding and their interplay with talin during early focal adhesion formation. Integrative Biology : Quantitative Biosciences From Nano to Macro. 7: 1285-96. PMID 26156744 DOI: 10.1039/c5ib00133a  1
2015 Bakhaty AA, Mofrad MR. Coupled Simulation of Heart Valves: Applications to Clinical Practice. Annals of Biomedical Engineering. 43: 1626-39. PMID 26101029 DOI: 10.1007/s10439-015-1348-x  1
2015 Soheilypour M, Peyro M, Peter SJ, Mofrad MR. Buckling behavior of individual and bundled microtubules. Biophysical Journal. 108: 1718-26. PMID 25863063 DOI: 10.1016/j.bpj.2015.01.030  1
2015 Mahboobi SH, Javanpour AA, Mofrad MR. The interaction of RNA helicase DDX3 with HIV-1 Rev-CRM1-RanGTP complex during the HIV replication cycle. Plos One. 10: e0112969. PMID 25723178 DOI: 10.1371/journal.pone.0112969  1
2015 Shamloo A, Heibatollahi M, Mofrad MR. Directional migration and differentiation of neural stem cells within three-dimensional microenvironments. Integrative Biology : Quantitative Biosciences From Nano to Macro. 7: 335-44. PMID 25633746 DOI: 10.1039/c4ib00144c  1
2015 Kheradvar A, Groves EM, Dasi LP, Alavi SH, Tranquillo R, Grande-Allen KJ, Simmons CA, Griffith B, Falahatpisheh A, Goergen CJ, Mofrad MR, Baaijens F, Little SH, Canic S. Emerging trends in heart valve engineering: Part I. Solutions for future. Annals of Biomedical Engineering. 43: 833-43. PMID 25488074 DOI: 10.1007/s10439-014-1209-z  1
2015 Kheradvar A, Groves EM, Goergen CJ, Alavi SH, Tranquillo R, Simmons CA, Dasi LP, Grande-Allen KJ, Mofrad MR, Falahatpisheh A, Griffith B, Baaijens F, Little SH, Canic S. Emerging trends in heart valve engineering: Part II. Novel and standard technologies for aortic valve replacement. Annals of Biomedical Engineering. 43: 844-57. PMID 25449148 DOI: 10.1007/s10439-014-1191-5  1
2015 Kheradvar A, Groves EM, Simmons CA, Griffith B, Alavi SH, Tranquillo R, Dasi LP, Falahatpisheh A, Grande-Allen KJ, Goergen CJ, Mofrad MR, Baaijens F, Canic S, Little SH. Emerging trends in heart valve engineering: Part III. Novel technologies for mitral valve repair and replacement. Annals of Biomedical Engineering. 43: 858-70. PMID 25287646 DOI: 10.1007/s10439-014-1129-y  1
2015 Seo BB, Chen PZ, Jahed Z, Mofrad MRK, Gu FX, Tsui TY. Trapping polystyrene and latex nanospheres inside hollow nanostructures using Staphylococcus aureus cells Journal of Experimental Nanoscience. DOI: 10.1080/17458080.2015.1059505  1
2015 Kheradvar A, Groves EM, Falahatpisheh A, Mofrad MK, Hamed Alavi S, Tranquillo R, Dasi LP, Simmons CA, Jane Grande-Allen K, Goergen CJ, Baaijens F, Little SH, Canic S, Griffith B. Emerging Trends in Heart Valve Engineering: Part IV. Computational Modeling and Experimental Studies Annals of Biomedical Engineering. DOI: 10.1007/s10439-015-1394-4  1
2014 Golji J, Mofrad MR. The talin dimer structure orientation is mechanically regulated. Biophysical Journal. 107: 1802-9. PMID 25418161 DOI: 10.1016/j.bpj.2014.08.038  1
2014 Modarres HP, Mofrad MRK. Filamin: A structural and functional biomolecule with important roles in cell biology, signaling and mechanics McB Molecular and Cellular Biomechanics. 11: 39-65. PMID 25330623  1
2014 Azimi M, Bulat E, Weis K, Mofrad MR. An agent-based model for mRNA export through the nuclear pore complex. Molecular Biology of the Cell. 25: 3643-53. PMID 25253717 DOI: 10.1091/mbc.E14-06-1065  1
2014 Jahed Z, Molladavoodi S, Seo BB, Gorbet M, Tsui TY, Mofrad MR. Cell responses to metallic nanostructure arrays with complex geometries. Biomaterials. 35: 9363-71. PMID 25123921 DOI: 10.1016/j.biomaterials.2014.07.022  1
2014 Rui X, Mehrbod M, Van Agthoven JF, Anand S, Xiong JP, Mofrad MR, Arnaout MA. The α-subunit regulates stability of the metal ion at the ligand-associated metal ion-binding site in β3 integrins. The Journal of Biological Chemistry. 289: 23256-63. PMID 24975416 DOI: 10.1074/jbc.M114.581470  1
2014 Jahed Z, Shams H, Mehrbod M, Mofrad MR. Mechanotransduction pathways linking the extracellular matrix to the nucleus. International Review of Cell and Molecular Biology. 310: 171-220. PMID 24725427 DOI: 10.1016/B978-0-12-800180-6.00005-0  1
2014 Zhao CL, Mahboobi SH, Moussavi-Baygi R, Mofrad MR. The interaction of CRM1 and the nuclear pore protein Tpr. Plos One. 9: e93709. PMID 24722547 DOI: 10.1371/journal.pone.0093709  1
2014 Mahalingam B, Van Agthoven JF, Xiong JP, Alonso JL, Adair BD, Rui X, Anand S, Mehrbod M, Mofrad MR, Burger C, Goodman SL, Arnaout MA. Atomic basis for the species-specific inhibition of αV integrins by monoclonal antibody 17E6 is revealed by the crystal structure of αVβ3 ectodomain-17E6 Fab complex. The Journal of Biological Chemistry. 289: 13801-9. PMID 24692540 DOI: 10.1074/jbc.M113.546929  1
2014 Jahed Z, Lin P, Seo BB, Verma MS, Gu FX, Tsui TY, Mofrad MR. Responses of Staphylococcus aureus bacterial cells to nanocrystalline nickel nanostructures. Biomaterials. 35: 4249-54. PMID 24576805 DOI: 10.1016/j.biomaterials.2014.01.080  1
2014 Shams H, Holt BD, Mahboobi SH, Jahed Z, Islam MF, Dahl KN, Mofrad MR. Actin reorganization through dynamic interactions with single-wall carbon nanotubes. Acs Nano. 8: 188-97. PMID 24351114 DOI: 10.1021/nn402865e  1
2014 Hasan A, Ragaert K, Swieszkowski W, Selimović S, Paul A, Camci-Unal G, Mofrad MR, Khademhosseini A. Biomechanical properties of native and tissue engineered heart valve constructs. Journal of Biomechanics. 47: 1949-63. PMID 24290137 DOI: 10.1016/j.jbiomech.2013.09.023  1
2014 Abdul Rahim NA, Pelet S, Mofrad MR, So PT, Kamm RD. Quantifying intracellular protein binding thermodynamics during mechanotransduction based on FRET spectroscopy. Methods (San Diego, Calif.). 66: 208-21. PMID 24184188 DOI: 10.1016/j.ymeth.2013.10.007  1
2013 Azimi M, Mofrad MR. Higher nucleoporin-Importinβ affinity at the nuclear basket increases nucleocytoplasmic import. Plos One. 8: e81741. PMID 24282617 DOI: 10.1371/journal.pone.0081741  1
2013 Mehrbod M, Trisno S, Mofrad MR. On the activation of integrin αIIbβ3: outside-in and inside-out pathways. Biophysical Journal. 105: 1304-15. PMID 24047981 DOI: 10.1016/j.bpj.2013.07.055  1
2013 Golji J, Mofrad MR. The interaction of vinculin with actin. Plos Computational Biology. 9: e1002995. PMID 23633939 DOI: 10.1371/journal.pcbi.1002995  1
2013 Mehrbod M, Mofrad MR. Localized lipid packing of transmembrane domains impedes integrin clustering. Plos Computational Biology. 9: e1002948. PMID 23516344 DOI: 10.1371/journal.pcbi.1002948  1
2013 Mofrad MRK, Kamm RD. Summary and outlook Cellular Mechanotransduction: Diverse Perspectives From Molecules to Tissues. 438-443. DOI: 10.1017/CBO9781139195874.020  1
2013 Wolf CB, Mofrad MRK. Mechanotransduction: Role of nuclear pore mechanics and nucleocytoplasmic transport Cellular Mechanotransduction: Diverse Perspectives From Molecules to Tissues. 417-437. DOI: 10.1017/CBO9781139195874.019  1
2013 Lee SE, Kamm RD, Mofrad MRK. A molecular perspective on mechanotransduction in focal adhesions Cellular Mechanotransduction: Diverse Perspectives From Molecules to Tissues. 250-268. DOI: 10.1017/CBO9781139195874.012  1
2013 Kamm RD, Mofrad MRK. Introduction Cellular Mechanotransduction: Diverse Perspectives From Molecules to Tissues. 1-19. DOI: 10.1017/CBO9781139195874.002  1
2013 Mofrad MRK, Kamm RD. Preface Cellular Mechanotransduction: Diverse Perspectives From Molecules to Tissues. xi-xii. DOI: 10.1017/CBO9781139195874.001  1
2013 Mofrad MRK, Kamm RD. Cellular mechanotransduction: Diverse perspectives from molecules to tissues Cellular Mechanotransduction: Diverse Perspectives From Molecules to Tissues. 1-481. DOI: 10.1017/CBO9781139195874  1
2013 Jamali Y, Jamali T, Mofrad MRK. An agent based model of integrin clustering: Exploring the role of ligand clustering, integrin homo-oligomerization, integrin-ligand affinity, membrane crowdedness and ligand mobility Journal of Computational Physics. 244: 264-278. DOI: 10.1016/  1
2013 Banaei-Kashani F, Asghari M, Mofrad MR, Shahabi C, Brenskelle L. SDPF: A framework for online, real-time cleansing of upstream operating data Society of Petroleum Engineers - Spe Western Regional / Pacific Section Aapg Joint Technical Conference 2013: Energy and the Environment Working Together For the Future. 741-749.  0.48
2012 Holt BD, Shams H, Horst TA, Basu S, Rape AD, Wang YL, Rohde GK, Mofrad MR, Islam MF, Dahl KN. Altered cell mechanics from the inside: dispersed single wall carbon nanotubes integrate with and restructure actin. Journal of Functional Biomaterials. 3: 398-417. PMID 24955540 DOI: 10.3390/jfb3020398  0.32
2012 Shams H, Golji J, Mofrad MR. A molecular trajectory of α-actinin activation. Biophysical Journal. 103: 2050-9. PMID 23200039 DOI: 10.1016/j.bpj.2012.08.044  1
2012 Golji J, Wendorff T, Mofrad MR. Phosphorylation primes vinculin for activation. Biophysical Journal. 102: 2022-30. PMID 22824265 DOI: 10.1016/j.bpj.2012.01.062  1
2012 Yoon SH, Kim YK, Han ED, Seo YH, Kim BH, Mofrad MR. Passive control of cell locomotion using micropatterns: the effect of micropattern geometry on the migratory behavior of adherent cells. Lab On a Chip. 12: 2391-402. PMID 22534829 DOI: 10.1039/c2lc40084g  1
2012 Peter SJ, Mofrad MR. Computational modeling of axonal microtubule bundles under tension. Biophysical Journal. 102: 749-57. PMID 22385845 DOI: 10.1016/j.bpj.2011.11.4024  1
2012 Yoon SH, Kim YK, Mofrad MRK. Mechanobiological Approaches for the Control of Cell Motility Microfluidic Cell Culture Systems. 105-136. DOI: 10.1016/B978-1-4377-3459-1.00005-3  1
2011 Mehrbod M, Mofrad MR. On the significance of microtubule flexural behavior in cytoskeletal mechanics. Plos One. 6: e25627. PMID 21998675 DOI: 10.1371/journal.pone.0025627  1
2011 Azimi M, Jamali Y, Mofrad MR. Accounting for diffusion in agent based models of reaction-diffusion systems with application to cytoskeletal diffusion. Plos One. 6: e25306. PMID 21966493 DOI: 10.1371/journal.pone.0025306  1
2011 Yoon SH, Chang J, Lin L, Mofrad MR. A biological breadboard platform for cell adhesion and detachment studies. Lab On a Chip. 11: 3555-62. PMID 21874200 DOI: 10.1039/c1lc20369j  1
2011 Yoon SH, Mofrad MR. Cell adhesion and detachment on gold surfaces modified with a thiol-functionalized RGD peptide. Biomaterials. 32: 7286-96. PMID 21813174 DOI: 10.1016/j.biomaterials.2011.05.077  1
2011 Moussavi-Baygi R, Jamali Y, Karimi R, Mofrad MR. Brownian dynamics simulation of nucleocytoplasmic transport: a coarse-grained model for the functional state of the nuclear pore complex. Plos Computational Biology. 7: e1002049. PMID 21673865 DOI: 10.1371/journal.pcbi.1002049  1
2011 Jamali T, Jamali Y, Mehrbod M, Mofrad MR. Nuclear pore complex: biochemistry and biophysics of nucleocytoplasmic transport in health and disease. International Review of Cell and Molecular Biology. 287: 233-86. PMID 21414590 DOI: 10.1016/B978-0-12-386043-9.00006-2  1
2011 Moussavi-Baygi R, Jamali Y, Karimi R, Mofrad MR. Biophysical coarse-grained modeling provides insights into transport through the nuclear pore complex. Biophysical Journal. 100: 1410-9. PMID 21402022 DOI: 10.1016/j.bpj.2011.01.061  1
2011 Golji J, Lam J, Mofrad MR. Vinculin activation is necessary for complete talin binding. Biophysical Journal. 100: 332-40. PMID 21244829 DOI: 10.1016/j.bpj.2010.11.024  1
2011 Mehrbod M, Mofrad MRK. On the mechanics of microtubule filaments Asme 2011 Summer Bioengineering Conference, Sbc 2011. 413-414. DOI: 10.1115/SBC2011-53896  1
2011 Chang J, Yoon SH, Mofrad MRK, Lin L. MEMS-based dynamic cell-to-cell culture platforms using electrochemical surface modifications Journal of Micromechanics and Microengineering. 21. DOI: 10.1088/0960-1317/21/5/054028  1
2011 Yoon SH, Lee C, Mofrad MRK. Viscoelastic characterization of the retracting cytoskeleton using subcellular detachment Applied Physics Letters. 98. DOI: 10.1063/1.3556557  1
2010 Kolahi KS, Mofrad MR. Mechanotransduction: a major regulator of homeostasis and development. Wiley Interdisciplinary Reviews. Systems Biology and Medicine. 2: 625-39. PMID 20890961 DOI: 10.1002/wsbm.79  1
2010 Jamali Y, Azimi M, Mofrad MR. A sub-cellular viscoelastic model for cell population mechanics. Plos One. 5. PMID 20856895 DOI: 10.1371/journal.pone.0012097  1
2010 Golji J, Mofrad MR. A molecular dynamics investigation of vinculin activation. Biophysical Journal. 99: 1073-81. PMID 20712990 DOI: 10.1016/j.bpj.2010.05.024  1
2010 Bao G, Kamm RD, Thomas W, Hwang W, Fletcher DA, Grodzinsky AJ, Zhu C, Mofrad MR. Molecular Biomechanics: The Molecular Basis of How Forces Regulate Cellular Function. Molecular & Cellular Biomechanics : McB. 3: 91-105. PMID 20700472 DOI: 10.1007/s12195-010-0109-z  1
2010 Chandran PL, Mofrad MR. Averaged implicit hydrodynamic model of semiflexible filaments. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 81: 031920. PMID 20365783 DOI: 10.1103/PhysRevE.81.031920  1
2010 Leach JR, Rayz VL, Soares B, Wintermark M, Mofrad MR, Saloner D. Carotid atheroma rupture observed in vivo and FSI-predicted stress distribution based on pre-rupture imaging. Annals of Biomedical Engineering. 38: 2748-65. PMID 20232151 DOI: 10.1007/s10439-010-0004-8  1
2010 Weinberg EJ, Shahmirzadi D, Mofrad MR. On the multiscale modeling of heart valve biomechanics in health and disease. Biomechanics and Modeling in Mechanobiology. 9: 373-87. PMID 20066464 DOI: 10.1007/s10237-009-0181-2  1
2010 Leach JR, Rayz VL, Mofrad MR, Saloner D. An efficient two-stage approach for image-based FSI analysis of atherosclerotic arteries. Biomechanics and Modeling in Mechanobiology. 9: 213-23. PMID 19756798 DOI: 10.1007/s10237-009-0172-3  1
2010 Golji J, Mofrad MRK. Focal adhesion mechanotransduction: Molecular events leading to vinculin activation Asme 2010 Summer Bioengineering Conference, Sbc 2010. 437-438. DOI: 10.1115/SBC2010-19711  1
2010 Mofrad MRK. Molecular mechanosensors and focal adhesion mechanotransduction Asme 2010 Summer Bioengineering Conference, Sbc 2010. 365-366. DOI: 10.1115/SBC2010-19707  1
2010 Azimi M, Mofrad MRK. Use of a social networking recommendation engine in science and engineering education for accessible discovery, organization and collaboration of research knowledge Asme 2010 Summer Bioengineering Conference, Sbc 2010. 423-424. DOI: 10.1115/SBC2010-19596  1
2010 Chang J, Yoon SH, Mofrad MRK, Lin L. MEMS-based biological platform for dynamic cell-to-cell interaction characterization Proceedings of the Ieee International Conference On Micro Electro Mechanical Systems (Mems). 92-95. DOI: 10.1109/MEMSYS.2010.5442559  1
2010 Yoon SH, Reyes-Ortiz V, Kim KH, Seo YH, Mofrad MRK. Analysis of circular PDMS microballoons with ultralarge deflection for MEMS design Journal of Microelectromechanical Systems. 19: 854-864. DOI: 10.1109/JMEMS.2010.2049984  1
2010 Croft LR, Mofrad MRK. Computational modeling of aortic heart valves Computational Modeling in Biomechanics. 221-252. DOI: 10.1007/978-90-481-3575-2_7  1
2010 Leach JR, Mofrad MRK, Saloner D. Computational models of vascular mechanics Computational Modeling in Biomechanics. 99-170. DOI: 10.1007/978-90-481-3575-2_4  1
2010 De S, Guilak F, Mofrad MRK. Computational modeling in biomechanics Computational Modeling in Biomechanics. 1-581. DOI: 10.1007/978-90-481-3575-2  1
2009 Chen HS, Kolahi KS, Mofrad MR. Phosphorylation facilitates the integrin binding of filamin under force. Biophysical Journal. 97: 3095-104. PMID 20006946 DOI: 10.1016/j.bpj.2009.08.059  1
2009 Weinberg EJ, Schoen FJ, Mofrad MR. A computational model of aging and calcification in the aortic heart valve. Plos One. 4: e5960. PMID 19536285 DOI: 10.1371/journal.pone.0005960  1
2009 Golji J, Collins R, Mofrad MR. Molecular mechanics of the alpha-actinin rod domain: bending, torsional, and extensional behavior. Plos Computational Biology. 5: e1000389. PMID 19436721 DOI: 10.1371/journal.pcbi.1000389  1
2009 Kolahi KS, White PF, Shreter DM, Classen AK, Bilder D, Mofrad MR. Quantitative analysis of epithelial morphogenesis in Drosophila oogenesis: New insights based on morphometric analysis and mechanical modeling. Developmental Biology. 331: 129-39. PMID 19409378 DOI: 10.1016/j.ydbio.2009.04.028  1
2009 Chandran PL, Mofrad MR. Rods-on-string idealization captures semiflexible filament dynamics. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 79: 011906. PMID 19257068 DOI: 10.1103/PhysRevE.79.011906  1
2009 Mofrad MRK. Rheology of the cytoskeleton Annual Review of Fluid Mechanics. 41: 433-453. DOI: 10.1146/annurev.fluid.010908.165236  1
2009 Yoon SH, Reyes-Ortiz V, Mofrad MRK. MEMS-based microballoons achieving multidirectional large-strain for cell mechanics studies Proceedings of the Asme Summer Bioengineering Conference 2009, Sbc2009. 1163-1164. DOI: 10.1115/SBC2009-206853  1
2009 Leach JR, Rayz VL, Mofrad MRK, Wintermark M, Saloner D. Patient specific FEM analysis of the atherosclerotic carotid bifurcation Proceedings of the Asme Summer Bioengineering Conference 2009, Sbc2009. 177-178. DOI: 10.1115/SBC2009-206828  1
2009 Chandran PL, Mofrad MRK. Hydrodynamics and semi-flexible filament behavior Proceedings of the Asme Summer Bioengineering Conference 2009, Sbc2009. 103-104. DOI: 10.1115/SBC2009-206748  1
2009 Zaman MH, Mofrad MRK, Bao G, Kamm RD. Cellular and Molecular Bioengineering: Editorial Cellular and Molecular Bioengineering. 2: 1. DOI: 10.1007/s12195-009-0054-x  1
2009 Chandran PL, Wolf CB, Mofrad MRK. Band-like stress fiber propagation in a continuum and implications for myosin contractile stresses Cellular and Molecular Bioengineering. 2: 13-27. DOI: 10.1007/s12195-009-0044-z  1
2009 Wolf CB, Mofrad MRK. Mechanotransduction and its role in stem Cell Biology Trends in Stem Cell Biology and Technology. 389-403. DOI: 10.1007/978-1-60327-905-5_20  1
2009 Du Y, Cropek D, Mofrad MRK, Weinberg EJ, Khademhosseini A, Borenstein J. Microfluidic systems for engineering vascularized tissue constructs Microfluidics For Biological Applications. 223-240. DOI: 10.1007/978-0-387-09480-9_7  1
2009 Weinberg EJ, Mofrad MRK. Multiscale simulations of the healthy and calcific human aortic valve Proceedings of the Asme Summer Bioengineering Conference, Sbc2008. 133-134.  1
2009 Yoon SH, Chang J, Reyes-Ortiz V, Lin L, Mofrad MRK. Addressable cell patterning and release using micro cell control platform: Biological breadboard Proceedings of Conference, Microtas 2009 - the 13th International Conference On Miniaturized Systems For Chemistry and Life Sciences. 1886-1888.  1
2008 Wolf C, Mofrad MR. On the octagonal structure of the nuclear pore complex: insights from coarse-grained models. Biophysical Journal. 95: 2073-85. PMID 18487299 DOI: 10.1529/biophysj.108.130336  1
2008 Lee SE, Chunsrivirot S, Kamm RD, Mofrad MR. Molecular dynamics study of talin-vinculin binding. Biophysical Journal. 95: 2027-36. PMID 18408041 DOI: 10.1529/biophysj.107.124487  1
2008 Mandadapu KK, Govindjee S, Mofrad MR. On the cytoskeleton and soft glassy rheology. Journal of Biomechanics. 41: 1467-78. PMID 18402964 DOI: 10.1016/j.jbiomech.2008.02.014  1
2008 Kolahi KS, Mofrad MR. Molecular mechanics of filamin's rod domain. Biophysical Journal. 94: 1075-83. PMID 17921200 DOI: 10.1529/biophysj.107.118802  1
2007 Weinberg EJ, Mofrad MRK. Three-dimensional, multiscale simulations of the human aortic valve Cardiovascular Engineering. 7: 140-155. PMID 18026835 DOI: 10.1007/s10558-007-9038-4  1
2007 Lee SE, Kamm RD, Mofrad MR. Force-induced activation of talin and its possible role in focal adhesion mechanotransduction. Journal of Biomechanics. 40: 2096-106. PMID 17544431 DOI: 10.1016/j.jbiomech.2007.04.006  1
2007 De S, Guilak F, Mofrad MRK. Special Issue on Computational Bioengineering Computer Methods in Applied Mechanics and Engineering. 196: 2963-2964. DOI: 10.1016/j.cma.2007.01.011  1
2007 Weinberg EJ, Mofrad MRK. Multiscale fluid-structure simulations of the aortic valve Proceedings of the Asme Summer Bioengineering Conference 2007, Sbc 2007. 245-246.  1
2007 Coghlan KM, McGarry P, Mofrad MRK, McHugh PE. Development of a discrete finite element cell model Proceedings of the Asme Summer Bioengineering Conference 2007, Sbc 2007. 437-438.  1
2006 Kamm RD, Mofrad MRK. Introduction, with the biological basis for cell mechanics Cytoskeletal Mechanics: Models and Measurements. 1-17. DOI: 10.1017/CBO9780511607318.002  1
2006 Mofrad MRK, Kamm RD. Cytoskeletal mechanics: Models and measurements Cytoskeletal Mechanics: Models and Measurements. 1-244. DOI: 10.1017/CBO9780511607318  1
2006 Karimi R, Chan R, Houser S, Bouma BE, Mofrad MRK. A novel framework for elastography and modulus estimation: Integration of tissue mechanics with imaging 2006 3rd Ieee International Symposium On Biomedical Imaging: From Nano to Macro - Proceedings. 2006: 602-605.  1
2005 Khalil AS, Chan RC, Chau AH, Bouma BE, Mofrad MR. Tissue elasticity estimation with optical coherence elastography: toward mechanical characterization of in vivo soft tissue. Annals of Biomedical Engineering. 33: 1631-9. PMID 16341928 DOI: 10.1007/s10439-005-6766-3  1
2005 Vaziri A, Lee H, Kamm RD, Mofrad MRK. A viscoelastic model for nucleus deformation and mechanics in atomic force microscopy indentation Proceedings of the 2005 Summer Bioengineering Conference. 2005: 1108-1109.  1
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