Neal W. Woodbury - Publications

Affiliations: 
Bioengineering Arizona State University, Tempe, AZ, United States 
Area:
Biomedical Engineering, Bioinformatics Biology, General Biophysics

131 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Taguchi AT, Boyd J, Diehnelt CW, Legutki JB, Zhao ZG, Woodbury NW. Comprehensive Prediction of Molecular Recognition in a Combinatorial Chemical Space Using Machine Learning. Acs Combinatorial Science. PMID 32786325 DOI: 10.1021/acscombsci.0c00003  0.6
2019 Zhou X, Mandal S, Jiang S, Lin S, Yang J, Liu Y, Whitten DG, Woodbury NW, Yan H. Efficient Long-range, Directional Energy Transfer through DNA-Templated Dye Aggregates. Journal of the American Chemical Society. PMID 31006232 DOI: 10.1021/jacs.9b01548  0.76
2019 Mandal S, Zhou X, Lin S, Yan H, Woodbury NW. Directed Energy Transfer through DNA-templated J-aggregates. Bioconjugate Chemistry. PMID 30985113 DOI: 10.1021/acs.bioconjchem.9b00043  0.76
2018 Mandal S, Espiritu E, Akram N, Lin S, Williams JC, Allen JP, Woodbury NW. Influence of the Electrochemical Properties of the Bacteriochlorophyll Dimer on Triplet Energy Transfer Dynamics in Bacterial Reaction Centers. The Journal of Physical Chemistry. B. PMID 30351114 DOI: 10.1021/acs.jpcb.8b07985  0.76
2017 Zhao ZG, Cordovez LA, Johnston SA, Woodbury N. Peptide Sequencing Directly on Solid Surfaces Using MALDI Mass Spectrometry. Scientific Reports. 7: 17811. PMID 29259225 DOI: 10.1038/s41598-017-18105-3  0.6
2017 Boulais É, Sawaya NPD, Veneziano R, Andreoni A, Banal JL, Kondo T, Mandal S, Lin S, Schlau-Cohen GS, Woodbury NW, Yan H, Aspuru-Guzik A, Bathe M. Programmed coherent coupling in a synthetic DNA-based excitonic circuit. Nature Materials. PMID 29180771 DOI: 10.1038/nmat5033  0.76
2017 Carey AM, Zhang H, Liu M, Sharaf D, Akram N, Yan H, Lin S, Woodbury N, Seo DK. Enhancing Photocurrent Generation in Photosynthetic Reaction Center-based Photoelectrochemical Cells with Biomimetic DNA Antenna. Chemsuschem. PMID 28929590 DOI: 10.1002/cssc.201701390  0.76
2017 Mandal S, Carey AM, Locsin J, Gao BR, Williams JC, Allen JP, Lin S, Woodbury NW. Mechanism of Triplet Energy Transfer in Photosynthetic Bacterial Reaction Centers. The Journal of Physical Chemistry. B. PMID 28605596 DOI: 10.1021/acs.jpcb.7b03373  0.76
2017 Andreoni A, Lin S, Liu H, Blankenship RE, Yan H, Woodbury NW. Orange Carotenoid Protein as a control element in an antenna system based on a DNA nanostructure. Nano Letters. PMID 28081606 DOI: 10.1021/acs.nanolett.6b04846  0.76
2016 Carey AM, Zhang H, Mieritz DG, Volosin AM, Gardiner AT, Cogdell RJ, Yan H, Seo DK, Lin S, Woodbury NW. Photocurrent generation by photosynthetic purple bacterial reaction centers interfaced with a porous antimony-doped tin oxide (ATO) electrode. Acs Applied Materials & Interfaces. PMID 27576015 DOI: 10.1021/acsami.6b07940  1
2016 Pan J, Saer R, Lin S, Beatty JT, Woodbury NW. Electron Transfer in Bacterial Reaction Centers with the Photoactive Bacteriopheophytin Replaced by a Bacteriochlorophyll through Coordinating Ligand Substitution. Biochemistry. PMID 27478991 DOI: 10.1021/acs.biochem.6b00317  1
2016 Sun C, Carey AM, Gao B, Wraight CA, Woodbury NW, Lin S. Ultrafast Electron Transfer Kinetics in the LM Dimer of Bacterial Photosynthetic Reaction Center From Rhodobacter Sphaeroides. The Journal of Physical Chemistry. B. PMID 27243380 DOI: 10.1021/acs.jpcb.6b05082  0.76
2016 Liu M, Fu J, Qi X, Wootten S, Woodbury N, Liu Y, Yan H. A three-enzyme pathway with an optimized geometric arrangement to facilitate substrate transfer. Chembiochem : a European Journal of Chemical Biology. PMID 26995014 DOI: 10.1002/cbic.201600103  1
2016 Zhao Z, Fu J, Dhakal S, Johnson-Buck A, Liu M, Zhang T, Woodbury NW, Liu Y, Walter NG, Yan H. Nanocaged enzymes with enhanced catalytic activity and increased stability against protease digestion. Nature Communications. 7: 10619. PMID 26861509 DOI: 10.1038/ncomms10619  1
2015 Wang W, Woodbury NW. Unstructured interactions between peptides and proteins: exploring the role of sequence motifs in affinity and specificity. Acta Biomaterialia. 11: 88-95. PMID 25266506 DOI: 10.1016/j.actbio.2014.09.039  1
2014 Dutta PK, Levenberg S, Loskutov A, Jun D, Saer R, Beatty JT, Lin S, Liu Y, Woodbury NW, Yan H. A DNA-directed light-harvesting/reaction center system. Journal of the American Chemical Society. 136: 16618-25. PMID 25340853 DOI: 10.1021/ja509018g  1
2014 Legutki JB, Zhao ZG, Greving M, Woodbury N, Johnston SA, Stafford P. Scalable high-density peptide arrays for comprehensive health monitoring. Nature Communications. 5: 4785. PMID 25183057 DOI: 10.1038/ncomms5785  0.6
2014 Stafford P, Cichacz Z, Woodbury NW, Johnston SA. Immunosignature system for diagnosis of cancer. Proceedings of the National Academy of Sciences of the United States of America. 111: E3072-80. PMID 25024171 DOI: 10.1073/pnas.1409432111  1
2014 Driscoll B, Lunceford C, Lin S, Woronowicz K, Niederman RA, Woodbury NW. Energy transfer properties of Rhodobacter sphaeroides chromatophores during adaptation to low light intensity. Physical Chemistry Chemical Physics : Pccp. 16: 17133-41. PMID 25008288 DOI: 10.1039/c4cp01981d  1
2014 Fu J, Yang YR, Johnson-Buck A, Liu M, Liu Y, Walter NG, Woodbury NW, Yan H. Multi-enzyme complexes on DNA scaffolds capable of substrate channelling with an artificial swinging arm. Nature Nanotechnology. 9: 531-6. PMID 24859813 DOI: 10.1038/nnano.2014.100  1
2014 Dutta PK, Lin S, Loskutov A, Levenberg S, Jun D, Saer R, Beatty JT, Liu Y, Yan H, Woodbury NW. Reengineering the optical absorption cross-section of photosynthetic reaction centers. Journal of the American Chemical Society. 136: 4599-604. PMID 24568563 DOI: 10.1021/ja411843k  1
2014 Saer RG, Pan J, Hardjasa A, Lin S, Rosell F, Mauk AG, Woodbury NW, Murphy ME, Beatty JT. Structural and kinetic properties of Rhodobacter sphaeroides photosynthetic reaction centers containing exclusively Zn-coordinated bacteriochlorophyll as bacteriochlorin cofactors. Biochimica Et Biophysica Acta. 1837: 366-74. PMID 24316146 DOI: 10.1016/j.bbabio.2013.11.015  1
2014 Wang W, Woodbury NW. Selective protein-peptide interactions at surfaces. Acta Biomaterialia. 10: 761-8. PMID 24184177 DOI: 10.1016/j.actbio.2013.10.025  1
2013 Liu M, Fu J, Hejesen C, Yang Y, Woodbury NW, Gothelf K, Liu Y, Yan H. A DNA tweezer-actuated enzyme nanoreactor. Nature Communications. 4: 2127. PMID 23820332 DOI: 10.1038/ncomms3127  1
2013 Guo Z, Lin S, Woodbury NW. Utilizing the dynamic stark shift as a probe for dielectric relaxation in photosynthetic reaction centers during charge separation. The Journal of Physical Chemistry. B. 117: 11383-90. PMID 23799254 DOI: 10.1021/jp4037843  1
2013 Pan J, Saer RG, Lin S, Guo Z, Beatty JT, Woodbury NW. The protein environment of the bacteriopheophytin anion modulates charge separation and charge recombination in bacterial reaction centers. The Journal of Physical Chemistry. B. 117: 7179-89. PMID 23688348 DOI: 10.1021/jp400132k  1
2013 Lebard DN, Martin DR, Lin S, Woodbury NW, Matyushov DV. Protein dynamics to optimize and control bacterial photosynthesis Chemical Science. 4: 4127-4136. DOI: 10.1039/c3sc51327k  1
2012 Guo Z, Woodbury NW, Pan J, Lin S. Protein dielectric environment modulates the electron-transfer pathway in photosynthetic reaction centers. Biophysical Journal. 103: 1979-88. PMID 23199926 DOI: 10.1016/j.bpj.2012.09.027  1
2012 Fu J, Liu M, Liu Y, Woodbury NW, Yan H. Interenzyme substrate diffusion for an enzyme cascade organized on spatially addressable DNA nanostructures. Journal of the American Chemical Society. 134: 5516-9. PMID 22414276 DOI: 10.1021/ja300897h  1
2012 Pan J, Lin S, Woodbury NW. Bacteriochlorophyll excited-state quenching pathways in bacterial reaction centers with the primary donor oxidized. The Journal of Physical Chemistry. B. 116: 2014-22. PMID 22229638 DOI: 10.1021/jp212441b  1
2012 Wang H, Hao Y, Jiang Y, Lin S, Woodbury NW. Role of protein dynamics in guiding electron-transfer pathways in reaction centers from Rhodobacter sphaeroides. The Journal of Physical Chemistry. B. 116: 711-7. PMID 22148392 DOI: 10.1021/jp211702b  1
2011 Guo Z, Lin S, Xin Y, Wang H, Blankenship RE, Woodbury NW. Comparing the temperature dependence of photosynthetic electron transfer in Chloroflexus aurantiacus and Rhodobactor sphaeroides reaction centers. The Journal of Physical Chemistry. B. 115: 11230-8. PMID 21827152 DOI: 10.1021/jp204239v  1
2011 Fu J, Reinhold J, Woodbury NW. Peptide-modified surfaces for enzyme immobilization. Plos One. 6: e18692. PMID 21494577 DOI: 10.1371/journal.pone.0018692  1
2011 Pan J, Lin S, Allen JP, Williams JC, Frank HA, Woodbury NW. Carotenoid excited-state properties in photosynthetic purple bacterial reaction centers: effects of the protein environment. The Journal of Physical Chemistry. B. 115: 7058-68. PMID 21488646 DOI: 10.1021/jp200077e  1
2010 Greving MP, Belcher PE, Diehnelt CW, Gonzalez-Moa MJ, Emery J, Fu J, Johnston SA, Woodbury NW. Thermodynamic additivity of sequence variations: an algorithm for creating high affinity peptides without large libraries or structural information. Plos One. 5: e15432. PMID 21085650 DOI: 10.1371/journal.pone.0015432  1
2010 Fu J, Cai K, Johnston SA, Woodbury NW. Exploring peptide space for enzyme modulators. Journal of the American Chemical Society. 132: 6419-24. PMID 20408521 DOI: 10.1021/ja100403a  1
2010 Greving MP, Belcher PE, Cox CD, Daniel D, Diehnelt CW, Woodbury NW. High-throughput screening in two dimensions: binding intensity and off-rate on a peptide microarray. Analytical Biochemistry. 402: 93-5. PMID 20211590 DOI: 10.1016/j.ab.2010.03.002  1
2010 Greving MP, Kumar P, Zhao ZG, Woodbury NW. Feature-level MALDI-MS characterization of in situ-synthesized peptide microarrays. Langmuir : the Acs Journal of Surfaces and Colloids. 26: 1456-9. PMID 20028116 DOI: 10.1021/la903510y  1
2009 Williams BA, Diehnelt CW, Belcher P, Greving M, Woodbury NW, Johnston SA, Chaput JC. Creating protein affinity reagents by combining peptide ligands on synthetic DNA scaffolds. Journal of the American Chemical Society. 131: 17233-41. PMID 19894711 DOI: 10.1021/ja9051735  1
2009 Lin S, Jaschke PR, Wang H, Paddock M, Tufts A, Allen JP, Rosell FI, Mauk AG, Woodbury NW, Beatty JT. Electron transfer in the Rhodobacter sphaeroides reaction center assembled with zinc bacteriochlorophyll. Proceedings of the National Academy of Sciences of the United States of America. 106: 8537-42. PMID 19439660 DOI: 10.1073/pnas.0812719106  1
2009 Wang H, Lin S, Katilius E, Laser C, Allen JP, Williams JC, Woodbury NW. Unusual temperature dependence of photosynthetic electron transfer due to protein dynamics. The Journal of Physical Chemistry. B. 113: 818-24. PMID 19115814 DOI: 10.1021/jp807468c  1
2009 Allen JP, Cordova JM, Jolley CC, Murray TA, Schneider JW, Woodbury NW, Williams JC, Niklas J, Klihm G, Reus M, Lubitz W. EPR, ENDOR, and special TRIPLE measurements of P(*+) in wild type and modified reaction centers from Rb. sphaeroides. Photosynthesis Research. 99: 1-10. PMID 18819016 DOI: 10.1007/s11120-008-9346-6  1
2008 Wang H, Lin S, Woodbury NW. Excitation wavelength dependence of primary charge separation in reaction centers from Rhodobacter sphaeroides. The Journal of Physical Chemistry. B. 112: 14296-301. PMID 18939793 DOI: 10.1021/jp8058799  1
2008 Chaput JC, Woodbury NW, Stearns LA, Williams BA. Creating protein biocatalysts as tools for future industrial applications. Expert Opinion On Biological Therapy. 8: 1087-98. PMID 18613761 DOI: 10.1517/14712598.8.8.1087  1
2008 Northen TR, Greving MP, Woodbury NW. Combinatorial screening of biomimetic protein affinity materials Advanced Materials. 20: 4691-4697. DOI: 10.1002/adma.200800567  1
2007 Katilius E, Flores C, Woodbury NW. Exploring the sequence space of a DNA aptamer using microarrays. Nucleic Acids Research. 35: 7626-35. PMID 17981839 DOI: 10.1093/nar/gkm922  1
2007 Gibasiewicz K, Ramesh VM, Lin S, Redding K, Woodbury NW, Webber AN. Two equilibration pools of chlorophylls in the Photosystem I core antenna of Chlamydomonas reinhardtii. Photosynthesis Research. 92: 55-63. PMID 17611814 DOI: 10.1007/s11120-006-9125-1  1
2007 Wang H, Lin S, Allen JP, Williams JC, Blankert S, Laser C, Woodbury NW. Protein dynamics control the kinetics of initial electron transfer in photosynthesis. Science (New York, N.Y.). 316: 747-50. PMID 17478721 DOI: 10.1126/science.1140030  1
2007 Kálmán L, Haffa ALM, Williams JC, Woodbury NW, Allen JP. Reduction of the oxidized bacteriochlorophyll dimer in reaction centers by ferrocene is dependent upon the driving force Journal of Porphyrins and Phthalocyanines. 11: 205-211.  1
2006 Katilius E, Katiliene Z, Woodbury NW. Signaling aptamers created using fluorescent nucleotide analogues. Analytical Chemistry. 78: 6484-9. PMID 16970324 DOI: 10.1021/ac060859k  1
2006 Katilius E, Woodbury NW. Multiphoton excitation of fluorescent DNA base analogs. Journal of Biomedical Optics. 11: 044004. PMID 16965161 DOI: 10.1117/1.2337521  1
2006 Lin S, Katilius E, Ilagan RP, Gibson GN, Frank HA, Woodbury NW. Mechanism of carotenoid singlet excited state energy transfer in modified bacterial reaction centers. The Journal of Physical Chemistry. B. 110: 15556-63. PMID 16884279 DOI: 10.1021/jp061201d  1
2006 Wang H, Lin S, Woodbury NW. Electronic transitions of the Soret band of reaction centers from Rhodobacter sphaeroides studied by femtosecond transient absorbance spectroscopy. The Journal of Physical Chemistry. B. 110: 6956-61. PMID 16571008 DOI: 10.1021/jp054850i  1
2006 Northen TR, Brune DC, Woodbury NW. Synthesis and characterization of peptide grafted porous polymer microstructures. Biomacromolecules. 7: 750-4. PMID 16529410 DOI: 10.1021/bm0506952  1
2006 Lin S, Katilius E, Woodbury NW. Carotenoid excited state kinetics in purple bacterial reaction centers with the primary electron donor oxidized Optics Infobase Conference Papers 1
2005 Haffa AL, Lin S, Lobrutto R, Williams JC, Taguchi AK, Allen JP, Woodbury NW. Environmental control of primary photochemistry in a mutant bacterial reaction center. The Journal of Physical Chemistry. B. 109: 19923-8. PMID 16853576 DOI: 10.1021/jp052007e  1
2005 Scruggs AW, Flores CL, Wachter R, Woodbury NW. Development and characterization of green fluorescent protein mutants with altered lifetimes. Biochemistry. 44: 13377-84. PMID 16201762 DOI: 10.1021/bi050550f  1
2005 Northen TR, Woodbury NW. Light-directed movement of polymer microstructures. Langmuir : the Acs Journal of Surfaces and Colloids. 21: 4949-53. PMID 15896035 DOI: 10.1021/la047566b  1
2005 Lovullo D, Daniel D, Yodh J, Lohr D, Woodbury NW. A fluorescence resonance energy transfer-based probe to monitor nucleosome structure Analytical Biochemistry. 341: 165-172. PMID 15866541 DOI: 10.1016/j.ab.2005.03.022  1
2004 Sension RJ, Cole AG, Harris AD, Fox CC, Woodbury NW, Lin S, Marsh EN. Photolysis and recombination of adenosylcobalamin bound to glutamate mutase. Journal of the American Chemical Society. 126: 1598-9. PMID 14871067 DOI: 10.1021/ja0396910  1
2004 Katilius E, Woodbury NW. Multi-photon excitation fluorescence correlation spectroscopy of fluorescent DNA base analogs Proceedings of Spie - the International Society For Optical Engineering. 5323: 160-167. DOI: 10.1117/12.529853  1
2004 Katilius E, L.Babendure J, Lin S, W.Woodbury N. Electron transfer dynamics in Rhodobacter sphaeroides reaction center mutants with a modified ligand for the monomer bacteriochlorophyll on the active side Photosynthesis Research. 81: 165-180. DOI: 10.1023/B:PRES.0000035048.10358.90  0.76
2004 Bowen BP, Scruggs A, Enderlein J, Sauer M, Woodbury N. Implementation of neural networks for the identification of single molecules Journal of Physical Chemistry A. 108: 4799-4804. DOI: 10.1021/jp036456v  1
2004 Katiliene Z, Katilius E, Uyeda GH, Williams JC, Woodbury NW. Increasing the Rate of Energy Transfer between the LHI Antenna and the Reaction Center in the Photosynthetic Bacterium Rhodobacter sphaeroides Journal of Physical Chemistry B. 108: 3863-3870.  1
2004 Haffa ALM, Lin S, Williams JC, Bowen BP, Taguchi AKW, Allen JP, Woodbury NW. Controlling the pathway of photosynthetic charge separation in bacterial reaction centers Journal of Physical Chemistry B. 108: 4-7.  1
2003 Bowen BP, Woodbury NW. TOTO binding affinity analysis using single-molecule fluorescence spectroscopy. Photochemistry and Photobiology. 78: 582-6. PMID 14743866 DOI: 10.1562/0031-8655(2003)078<0582:TBAAUS>2.0.CO;2  1
2003 Bowen BP, Enderlein J, Woodbury NW. Single-molecule fluorescence spectroscopy of TOTO on poly-AT and poly-GC DNA. Photochemistry and Photobiology. 78: 576-81. PMID 14743865 DOI: 10.1562/0031-8655(2003)078<0576:SFSOTO>2.0.CO;2  1
2003 Scruggs AW, Woodbury NW. Optical processing of bacterial libraries for directed evolution. Biotechnology and Bioengineering. 84: 445-51. PMID 14574702 DOI: 10.1002/bit.10794  1
2003 Montaño GA, Bowen BP, LaBelle JT, Woodbury NW, Pizziconi VB, Blankenship RE. Characterization of Chlorobium tepidum chlorosomes: a calculation of bacteriochlorophyll c per chlorosome and oligomer modeling. Biophysical Journal. 85: 2560-5. PMID 14507718 DOI: 10.1016/S0006-3495(03)74678-5  1
2003 Gibasiewicz K, Ramesh VM, Lin S, Redding K, Woodbury NW, Webber AN. Excitonic interactions in wild-type and mutant PSI reaction centers. Biophysical Journal. 85: 2547-59. PMID 14507717 DOI: 10.1016/S0006-3495(03)74677-3  1
2003 Katiliene Z, Katilius E, Woodbury NW. Single molecule detection of DNA looping by NgoMIV restriction endonuclease. Biophysical Journal. 84: 4053-61. PMID 12770909 DOI: 10.1016/S0006-3495(03)75131-5  1
2003 Bowen B, Woodbury N. Single-molecule Fluorescence Lifetime and Anisotropy Measurements of the Red Fluorescent Protein, DsRed, in Solution Photochemistry and Photobiology. 77: 362-369. PMID 12733647 DOI: 10.1562/0031-8655(2003)077<0362:SFLAAM>2.0.CO;2  1
2003 Babendure J, Liddell PA, Bash R, LoVullo D, Schiefer TK, Williams M, Daniel DC, Thompson M, Taguchi AKW, Lohr D, Woodbury NW. Development of a fluorescent probe for the study of nucleosome assembly and dynamics Analytical Biochemistry. 317: 1-11. PMID 12729594 DOI: 10.1016/S0003-2697(03)00085-X  1
2003 Katiliene Z, Katilius E, Woodbury NW. Energy trapping and detrapping in reaction center mutants from Rhodobacter sphaeroides. Biophysical Journal. 84: 3240-51. PMID 12719253 DOI: 10.1016/S0006-3495(03)70048-4  1
2003 Bowen BP, Enderlein J, Woodbury NWT. Multiparameter single-molecule fluorescence measurements of DNA intercalating fluorophores Proceedings of Spie - the International Society For Optical Engineering. 4962: 22-26. DOI: 10.1117/12.486348  1
2003 Lin S, Katilius E, Taguchi AKW, Woodbury NW. Excitation Energy Transfer from Carotenoid to Bacteriochlorophyll in the Photosynthetic Purple Bacterial Reaction Center of Rhodobacter Sphaeroides Journal of Physical Chemistry B. 107: 14103-14108.  1
2003 Freiberg A, Rätsep M, Timpmann K, Trinkunas G, Woodbury NW. Self-trapped excitons in LH2 antenna complexes between 5 K and ambient temperature Journal of Physical Chemistry B. 107: 11510-11519.  1
2003 Katilius E, Babendure JL, Katiliene Z, Lin S, Taguchi AKW, Woodbury NW. Manipulations of the B-Side Charge-Separated States' Energetics in the Rhodobacter sphaeroides Reaction Center Journal of Physical Chemistry B. 107: 12029-12034.  1
2003 Haffa ALM, Lin S, Williams JC, Taguchi AKW, Allen JP, Woodbury NW. High Yield of Long-Lived B-Side Charge Separation at Room Temperature in Mutant Bacterial Reaction Centers Journal of Physical Chemistry B. 107: 12503-12510.  1
2002 Daniel DC, Thompson M, Woodbury NW. DNA-binding interactions and conformational fluctuations of Tc3 transposase DNA binding domain examined with single molecule fluorescence spectroscopy. Biophysical Journal. 82: 1654-66. PMID 11867477 DOI: 10.1016/S0006-3495(02)75516-1  1
2002 Katilius E, Katiliene Z, Lin S, Taguchi AKW, Woodbury NW. B-side electron transfer in the HE(M182) reaction center mutant from rhodobacter sphaeroides Journal of Physical Chemistry B. 106: 12344-12350. DOI: 10.1021/jp026388x  1
2002 Haffa ALM, Lin S, Katilius E, Williams JC, Taguchi AKW, Allen JP, Woodbury NW. The dependence of the initial electron-transfer rate on driving force in Rhodobacter sphaeroides reaction centers Journal of Physical Chemistry B. 106: 7376-7384. DOI: 10.1021/jp0257552  1
2002 Gibasiewicz K, Ramesh VM, Lin S, Woodbury NW, Webber AN. Excitation dynamics in eukaryotic PS I from Chlamydomonas reinhardtii CC 2696 at 10 K. Direct detection of the reaction center exciton states Journal of Physical Chemistry B. 106: 6322-6330. DOI: 10.1021/jp014608l  1
2002 Katilius E, Katiliene Z, Lin S, Taguchi AKW, Woodbury NW. B side electron transfer in a rhodobacter sphaeroides reaction center mutant in which the B side monomer bacteriochlorophyll is replaced with bacteriopheophytin: Low-temperature study and energetics of charge-separated states Journal of Physical Chemistry B. 106: 1471-1475. DOI: 10.1021/jp013265o  1
2001 Williams JC, Haffa AL, McCulley JL, Woodbury NW, Allen JP. Electrostatic interactions between charged amino acid residues and the bacteriochlorophyll dimer in reaction centers from Rhodobacter sphaeroides. Biochemistry. 40: 15403-7. PMID 11735424 DOI: 10.1021/bi011574z  1
2001 Lin S, Katilius E, Haffa AL, Taguchi AK, Woodbury NW. Blue light drives B-side electron transfer in bacterial photosynthetic reaction centers. Biochemistry. 40: 13767-73. PMID 11705365 DOI: 10.1021/bi015612q  1
2001 Devanathan S, Lin S, Cusanovich MA, Woodbury N, Tollin G. Early photocycle kinetic behavior of the E46A and Y42F mutants of photoactive yellow protein: Femtosecond spectroscopy Biophysical Journal. 81: 2314-2319. PMID 11566800 DOI: 10.1016/S0006-3495(01)75877-8  1
2001 Thompson M, Woodbury NW. Thermodynamics of specific and nonspecific DNA binding by two DNA-binding domains conjugated to fluorescent probes Biophysical Journal. 81: 1793-1804. PMID 11509389  1
2001 Gibasiewicz K, Ramesh VM, Melkozernov AN, Lin S, Woodbury NW, Blankenship RE, Webber AN. Excitation dynamics in the core antenna of PS I from Chlamydomonas reinhardtii CC 2696 at room temperature Journal of Physical Chemistry B. 105: 11498-11506. DOI: 10.1021/jp012089g  1
2001 Timpmann K, Katiliene Z, Woodbury NW, Freiberg A. Exciton self trapping in one-dimensional photosynthetic antennas Journal of Physical Chemistry B. 105: 12223-12225. DOI: 10.1021/jp011147v  1
2000 Eastman JE, Taguchi AK, Lin S, Jackson JA, Woodbury NW. Characterization of a Rhodobacter capsulatus reaction center mutant that enhances the distinction between spectral forms of the initial electron donor. Biochemistry. 39: 14787-98. PMID 11101294 DOI: 10.1021/bi0005254  1
2000 Devanathan S, Lin S, Cusanovich MA, Woodbury N, Tollin G. Early intermediates in the photocycle of the Glu46Gln mutant of photoactive yellow protein: Femtosecond spectroscopy Biophysical Journal. 79: 2132-2137. PMID 11023916 DOI: 10.1016/S0006-3495(00)76460-5  1
2000 Thompson M, Woodbury NW. Fluorescent and photochemical properties of a single zinc finger conjugated to a fluorescent DNA-binding probe Biochemistry. 39: 4327-4338. PMID 10757981 DOI: 10.1021/bi991907g  1
2000 Timpmann K, Woodbury NW, Freiberg A. Unraveling exciton relaxation and energy transfer in LH2 photosynthetic antennas Journal of Physical Chemistry B. 104: 9770-9771.  1
2000 Daniel DC, Thompson M, Woodbury NW. Fluorescence intensity fluctuations of individual labeled DNA fragments and a DNA binding protein in solution at the single molecule level: A comparison of photobleaching, diffusion, and binding dynamics Journal of Physical Chemistry B. 104: 1382-1390.  1
1999 Devanathan S, Pacheco A, Ujj L, Cusanovich M, Tollin G, Lin S, Woodbury N. Femtosecond spectroscopic observations of initial intermediates in the photocycle of the photoactive yellow protein from Ectothiorhodospira halophila Biophysical Journal. 77: 1017-1023. PMID 10423446 DOI: 10.1016/S0006-3495(99)76952-3  1
1999 Tang CK, Williams JC, Taguchi AKW, Allen JP, Woodbury NW. P+H(A)- charge recombination reaction rate constant in Rhodobacter sphaeroides reaction centers is independent of the P/P+ midpoint potential Biochemistry. 38: 8794-8799. PMID 10393555 DOI: 10.1021/bi990346q  1
1999 Freiberg A, Timpmann K, Ruus R, Woodbury NW. Disordered Exciton Analysis of Linear and Nonlinear Absorption Spectra of Antenna Bacteriochlorophyll Aggregates: LH 2-Only Mutant Chromatophores of Rhodobacter sphaeroides at 8 K under Spectrally Selective Excitation Journal of Physical Chemistry B. 103: 10032-10041.  1
1999 Lin S, Jackson JA, Taguchi AKW, Woodbury NW. B-side electron transfer promoted by absorbance of multiple photons in Rhodobacter sphaeroides R-26 reaction centers Journal of Physical Chemistry B. 103: 4757-4763.  1
1999 Katilius E, Turanchik T, Lin S, Taguchi AKW, Woodbury NW. B-side electron transfer in a Rhodobacter sphaeroides reaction center mutant in which the B-side monomer bacteriochlorophyll is replaced with bacteriopheophytin Journal of Physical Chemistry B. 103: 7386-7389.  1
1998 Lin S, Jackson J, Taguchi AKW, Woodbury NW. Excitation wavelength dependent spectral evolution in Rhodobacter sphaeroides R-26 reaction centers at low temperatures: The Qy transition region Journal of Physical Chemistry B. 102: 4016-4022.  1
1998 Freiberg A, Timpmann K, Lin S, Woodbury NW. Exciton relaxation and transfer in the LH2 antenna network of photosynthetic bacteria Journal of Physical Chemistry B. 102: 10974-10982.  1
1998 Freiberg A, Jackson JA, Lin S, Woodbury NW. Subpicosecond pump-supercontinuum probe spectroscopy of LH2 photosynthetic antenna proteins at low temperature Journal of Physical Chemistry A. 102: 4372-4380.  1
1997 Jackson JA, Lin S, Taguchi AKW, Williams JC, Allen JP, Woodbury NW. Energy transfer in Rhodobacter sphaeroides reaction centers with the initial electron donor oxidized or missing Journal of Physical Chemistry B. 101: 5747-5754.  1
1996 Lin S, Xiao W, Eastman JE, Taguchi AK, Woodbury NW. Low-temperature femtosecond-resolution transient absorption spectroscopy of large-scale symmetry mutants of bacterial reaction centers. Biochemistry. 35: 3187-96. PMID 8605153 DOI: 10.1021/bi952196z  1
1996 Taguchi AK, Eastman JE, Gallo DM, Sheagley E, Xiao W, Woodbury NW. Asymmetry requirements in the photosynthetic reaction center of Rhodobacter capsulatus. Biochemistry. 35: 3175-86. PMID 8605152 DOI: 10.1021/bi9521957  1
1996 Lin S, Taguchi AKW, Woodbury NW. Excitation wavelength dependence of energy transfer and charge separation in reaction centers from Rhodobacter sphaeroides: Evidence for adiabatic electron transfer Journal of Physical Chemistry. 100: 17067-17078.  1
1996 Freiberg A, Allen JP, Williams JC, Woodbury NW. Energy trapping and detrapping by wild type and mutant reaction centers of purple non-sulfur bacteria Photosynthesis Research. 48: 309-319.  1
1996 Peloquin JM, Lin S, Taguchi AKW, Woodbury NW. Excitation wavelength dependence of bacterial reaction center photochemistry. 2. Low-temperature measurements and spectroscopy of charge separation Journal of Physical Chemistry. 100: 14228-14235.  1
1995 Woodbury NW, Lin S, Lin X, Peloquin JM, Taguchi AKW, Williams JC, Allen JP. The role of reaction center excited state evolution during charge separation in a Rb. sphaeroides mutant with an initial electron donor midpoint potential 260 mV above wild type Chemical Physics. 197: 405-421. DOI: 10.1016/0301-0104(95)00170-S  1
1995 Peloquin JM, Lin S, Taguchi AKW, Woodbury NW. Excitation wavelength dependence of bacterial reaction center photochemistry. 1. Ground state and excited state evolution Journal of Physical Chemistry. 99: 1349-1356.  1
1994 Xiao W, Lin S, Taguchi AKW, Woodbury NW. Femtosecond pump-probe analysis of energy and electron transfer in photosynthetic membranes of Rhodobacter capsulatus Biochemistry. 33: 8313-8322. PMID 8031764  1
1994 Woodbury NW, Peloquin JM, Alden RG, Lin X, Lin S, Taguchi AK, Williams JC, Allen JP. Relationship between thermodynamics and mechanism during photoinduced charge separation in reaction centers from Rhodobacter sphaeroides. Biochemistry. 33: 8101-12. PMID 8025116  1
1994 Peloquin JM, Williams JC, Lin X, Alden RG, Taguchi AK, Allen JP, Woodbury NW. Time-dependent thermodynamics during early electron transfer in reaction centers from Rhodobacter sphaeroides. Biochemistry. 33: 8089-100. PMID 8025115  1
1994 Wang S, Lin S, Lin X, Woodbury NW, Allen JP. Comparative study of reaction centers from purple photosynthetic bacteria: Isolation and optical spectroscopy Photosynthesis Research. 42: 203-215. DOI: 10.1007/BF00018263  1
1993 Taguchi AK, Stocker JW, Boxer SG, Woodbury NW. Photosynthetic reaction center mutagenesis via chimeric rescue of a non-functional Rhodobacter capsulatus puf operon with sequences from Rhodobacter sphaeroides. Photosynthesis Research. 36: 43-58. PMID 24318797 DOI: 10.1007/BF00018074  1
1993 Godik VI, Blankenship RE, Causgrove TP, Woodbury N. Time-resolved tryptophan fluorescence in photosynthetic reaction centers from Rhodobacter sphaeroides. Febs Letters. 321: 229-32. PMID 8477854 DOI: 10.1016/0014-5793(93)80114-A  0.44
1993 Murchison HA, Alden RG, Allen JP, Peloquin JM, Taguchi AK, Woodbury NW, Williams JC. Mutations designed to modify the environment of the primary electron donor of the reaction center from Rhodobacter sphaeroides: phenylalanine to leucine at L167 and histidine to phenylalanine at L168. Biochemistry. 32: 3498-505. PMID 8461311 DOI: 10.1021/bi00064a038  0.6
1993 Nabedryk E, Allen JP, Taguchi AKW, Williams JC, Woodbury NW, Breton J. Fourier transform infrared study of the primary electron donor in chromatophores of Rhodobacter sphaeroides with reaction centers genetically modified at residues M160 and L131 Biochemistry. 32: 13879-13885. PMID 8268163 DOI: 10.1021/bi00213a017  1
1993 Alden RG, Hayashi M, Allen JP, Woodbury NW, Murchison H, Lin SH. Experimental and theoretical studies of femtosecond time-resolved three-dimensional spectra of photosynthetic reaction centers Chemical Physics Letters. 208: 350-358. DOI: 10.1016/0009-2614(93)89088-Y  1
1992 Williams JC, Alden RG, Murchison HA, Peloquin JM, Woodbury NW, Allen JP. Effects of mutations near the bacteriochlorophylls in reaction centers from Rhodobacter sphaeroides. Biochemistry. 31: 11029-37. PMID 1445841 DOI: 10.1021/bi00160a012  1
1992 Taguchi AK, Stocker JW, Alden RG, Causgrove TP, Peloquin JM, Boxer SG, Woodbury NW. Biochemical characterization and electron-transfer reactions of sym1, a Rhodobacter capsulatus reaction center symmetry mutant which affects the initial electron donor. Biochemistry. 31: 10345-55. PMID 1420154  1
1992 Stocker JW, Taguchi AK, Murchison HA, Woodbury NW, Boxer SG. Spectroscopic and redox properties of sym1 and (M)F195H: Rhodobacter capsulatus reaction center symmetry mutants which affect the initial electron donor. Biochemistry. 31: 10356-62. PMID 1329946  1
1989 Woodbury NW, Dobres M, Thompson WF. The identification and localization of 33 pea chloroplast transcription initiation sites. Current Genetics. 16: 433-45. PMID 2482136 DOI: 10.1007/BF00340723  1
1988 Woodbury NW, Roberts LL, Palmer JD, Thompson WF. A transcription map of the pea chloroplast genome Current Genetics. 14: 75-89. DOI: 10.1007/BF00405857  1
1986 Woodbury NW, Parson WW, Gunner MR, Prince RC, Dutton PL. Radical-pair energetics and decay mechanisms in reaction centers containing anthraquinones, naphthoquinones or benzoquinones in place of ubiquinone. Biochimica Et Biophysica Acta. 851: 6-22. PMID 3524681 DOI: 10.1016/0005-2728(86)90243-4  1
1986 Woodbury NW, Parson WW. Nanosecond fluorescence from chromatophores of Rhodopseudomonas sphaeroides and Rhodospirillum rubrum Bba - Bioenergetics. 850: 197-210. PMID 3087422 DOI: 10.1016/0005-2728(86)90174-X  1
1985 Woodbury NW, Becker M, Middendorf D, Parson WW. Picosecond kinetics of the initial photochemical electron-transfer reaction in bacterial photosynthetic reaction centers Biochemistry. 24: 7516-7521. PMID 3879185  1
1984 Woodbury NWT, Parson WW. Nanosecond fluorescence from isolated photosynthetic reaction centers of Rhodopseudomonas sphaeroides Bba - Bioenergetics. 767: 345-361. PMID 6333897 DOI: 10.1016/0005-2728(84)90205-6  1
1982 Doolittle RF, Woodbury NW, Jue RA. Ribosomal protein S1 is the product of a series of contiguous duplications Bioscience Reports. 2: 405-412. PMID 7049263 DOI: 10.1007/BF01119303  1
1980 Jue RA, Woodbury NW, Doolittle RF. Sequence homologies among E. coli ribosomal proteins: Evidence for evolutionarily related groupings and internal duplications Journal of Molecular Evolution. 15: 129-148. PMID 6995620 DOI: 10.1007/BF01732666  1
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